ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl56h02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_466651.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2967 Score = 83.8 bits (42), Expect = 4e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 133 aaaagacatgaccttggcctccacattgggaaggtgagtagcaaccaatcatggcgtcaa 192 ||||| |||||||||||||| | ||||| |||||| | ||||| || ||||| |||| Sbjct: 262 aaaaggcatgaccttggccttctaattggaaaggtgtgaagcaattaagtatggcttcaa 321 Query: 193 gggcaatcattaggagaagaaagtatctcttggatcatgttaacgcacctatcctctc 250 |||| |||| || ||||| |||||||| |||||||||||||||||||||| |||||| Sbjct: 322 gggcggtcatcagaagaaggaagtatcttttggatcatgttaacgcacctaccctctc 379
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 4e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 133 aaaagacatgaccttggcctccacattgggaaggtgagtagcaaccaatcatggcgtcaa 192 ||||| |||||||||||||| | ||||| |||||| | ||||| || ||||| |||| Sbjct: 23893228 aaaaggcatgaccttggccttctaattggaaaggtgtgaagcaattaagtatggcttcaa 23893169 Query: 193 gggcaatcattaggagaagaaagtatctcttggatcatgttaacgcacctatcctctc 250 |||| |||| || ||||| |||||||| |||||||||||||||||||||| |||||| Sbjct: 23893168 gggcggtcatcagaagaaggaagtatcttttggatcatgttaacgcacctaccctctc 23893111
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 83.8 bits (42), Expect = 4e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 133 aaaagacatgaccttggcctccacattgggaaggtgagtagcaaccaatcatggcgtcaa 192 ||||| |||||||||||||| | ||||| |||||| | ||||| || ||||| |||| Sbjct: 114894 aaaaggcatgaccttggccttctaattggaaaggtgtgaagcaattaagtatggcttcaa 114835 Query: 193 gggcaatcattaggagaagaaagtatctcttggatcatgttaacgcacctatcctctc 250 |||| |||| || ||||| |||||||| |||||||||||||||||||||| |||||| Sbjct: 114834 gggcggtcatcagaagaaggaagtatcttttggatcatgttaacgcacctaccctctc 114777
>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0496E03 Length = 138622 Score = 83.8 bits (42), Expect = 4e-13 Identities = 99/118 (83%) Strand = Plus / Minus Query: 133 aaaagacatgaccttggcctccacattgggaaggtgagtagcaaccaatcatggcgtcaa 192 ||||| |||||||||||||| | ||||| |||||| | ||||| || ||||| |||| Sbjct: 27192 aaaaggcatgaccttggccttctaattggaaaggtgtgaagcaattaagtatggcttcaa 27133 Query: 193 gggcaatcattaggagaagaaagtatctcttggatcatgttaacgcacctatcctctc 250 |||| |||| || ||||| |||||||| |||||||||||||||||||||| |||||| Sbjct: 27132 gggcggtcatcagaagaaggaagtatcttttggatcatgttaacgcacctaccctctc 27075
>dbj|AK120177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033F11, full insert sequence Length = 2323 Score = 83.8 bits (42), Expect = 4e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 133 aaaagacatgaccttggcctccacattgggaaggtgagtagcaaccaatcatggcgtcaa 192 ||||| |||||||||||||| | ||||| |||||| | ||||| || ||||| |||| Sbjct: 260 aaaaggcatgaccttggccttctaattggaaaggtgtgaagcaattaagtatggcttcaa 319 Query: 193 gggcaatcattaggagaagaaagtatctcttggatcatgttaacgcacctatcctctc 250 |||| |||| || ||||| |||||||| |||||||||||||||||||||| |||||| Sbjct: 320 gggcggtcatcagaagaaggaagtatcttttggatcatgttaacgcacctaccctctc 377
>dbj|AK100424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088B16, full insert sequence Length = 2967 Score = 83.8 bits (42), Expect = 4e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 133 aaaagacatgaccttggcctccacattgggaaggtgagtagcaaccaatcatggcgtcaa 192 ||||| |||||||||||||| | ||||| |||||| | ||||| || ||||| |||| Sbjct: 262 aaaaggcatgaccttggccttctaattggaaaggtgtgaagcaattaagtatggcttcaa 321 Query: 193 gggcaatcattaggagaagaaagtatctcttggatcatgttaacgcacctatcctctc 250 |||| |||| || ||||| |||||||| |||||||||||||||||||||| |||||| Sbjct: 322 gggcggtcatcagaagaaggaagtatcttttggatcatgttaacgcacctaccctctc 379
>gb|AC010325.7| Homo sapiens chromosome 19 clone CTD-2568A17, complete sequence Length = 166439 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 9 cggcccctttcctcccttcccctct 33 ||||||||||||||||||||||||| Sbjct: 23873 cggcccctttcctcccttcccctct 23849
>gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, complete sequence Length = 192097 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 9 cggcccctttcctcccttcccctct 33 ||||||||||||||||||||||||| Sbjct: 190854 cggcccctttcctcccttcccctct 190830
>gb|AC073520.6| Homo sapiens BAC clone RP11-792H4 from 7, complete sequence Length = 85219 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 19 cctcccttcccctctgctccccaa 42 |||||||||||||||||||||||| Sbjct: 10733 cctcccttcccctctgctccccaa 10710
>gb|AC147213.3| Pan troglodytes BAC clone RP43-127I22 from chromosome 7, complete sequence Length = 205208 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 19 cctcccttcccctctgctccccaa 42 |||||||||||||||||||||||| Sbjct: 53658 cctcccttcccctctgctccccaa 53681
>gb|AC146383.4| Pan troglodytes BAC clone RP43-125D18 from 7, complete sequence Length = 141329 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 18 tcctcccttcccctctgctcccc 40 ||||||||||||||||||||||| Sbjct: 129028 tcctcccttcccctctgctcccc 129050
>gb|AC146220.3| Pan troglodytes BAC clone RP43-27B14 from 7, complete sequence Length = 200195 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 18 tcctcccttcccctctgctcccc 40 ||||||||||||||||||||||| Sbjct: 89955 tcctcccttcccctctgctcccc 89977
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.098 Identities = 41/47 (87%) Strand = Plus / Minus Query: 172 agcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 218 ||||||||| ||||| || ||||| |||||||||||||| |||||| Sbjct: 24828059 agcaaccaaaaatggcctcgagggcgatcattaggagaaggaagtat 24828013
>gb|AC008266.3|AC008266 Homo sapiens PAC clone RP5-1145A24 from 7p11.2-p21, complete sequence Length = 177675 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 18 tcctcccttcccctctgctcccc 40 ||||||||||||||||||||||| Sbjct: 101655 tcctcccttcccctctgctcccc 101633
>gb|AC152829.2| Ornithorhynchus anatinus BAC clone OABb-466A1 from chromosome unknown, complete sequence Length = 160523 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctctgctcc 38 ||||||||||||||| ||||||||||| Sbjct: 92170 cccctttcctccctttccctctgctcc 92144
>gb|AC006960.1|AC006960 Homo sapiens clone RP11-182J23 from 7p14-15, complete sequence Length = 179757 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 18 tcctcccttcccctctgctcccc 40 ||||||||||||||||||||||| Sbjct: 39631 tcctcccttcccctctgctcccc 39609
>dbj|AK068782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159H18, full insert sequence Length = 2792 Score = 46.1 bits (23), Expect = 0.098 Identities = 41/47 (87%) Strand = Plus / Plus Query: 172 agcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 218 ||||||||| ||||| || ||||| |||||||||||||| |||||| Sbjct: 229 agcaaccaaaaatggcctcgagggcgatcattaggagaaggaagtat 275
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 46.1 bits (23), Expect = 0.098 Identities = 41/47 (87%) Strand = Plus / Minus Query: 172 agcaaccaatcatggcgtcaagggcaatcattaggagaagaaagtat 218 ||||||||| ||||| || ||||| |||||||||||||| |||||| Sbjct: 89775 agcaaccaaaaatggcctcgagggcgatcattaggagaaggaagtat 89729
>gb|BC077601.1| Xenopus laevis UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3, mRNA (cDNA clone MGC:84507 IMAGE:5077911), complete cds Length = 2265 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 379 attttacaaaggggggtctgct 400 |||||||||||||||||||||| Sbjct: 234 attttacaaaggggggtctgct 255
>gb|AC124411.5| Mus musculus BAC clone RP24-267C20 from chromosome 13, complete sequence Length = 177414 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctct 33 |||||||||||||||||||||| Sbjct: 19672 cccctttcctcccttcccctct 19651
>emb|CR848708.12| Wallaby DNA sequence from clone MEKBa-201B9, complete sequence Length = 194524 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctct 33 |||||||||||||||||||||| Sbjct: 28855 cccctttcctcccttcccctct 28834
>gb|AC098886.4| Mus musculus BAC clone RP23-122M21 from 4, complete sequence Length = 219825 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctctgctcccca 41 ||||||||||||| |||||||| ||||||| Sbjct: 157571 cccctttcctcccctcccctctcctcccca 157542
>emb|AL513016.5| Human DNA sequence from clone RP11-474O21 on chromosome 1 Contains the 5' end of the gene for short-chain dehydrogenase/reductase 1 (SDR1), two genes for novel proteins similar to esterases, a ribosomal protein L23a (RPL23A) pseudogene, the gene for a novel protein (MGC35194) and a CpG island, complete sequence Length = 150720 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 131 tgaaaagacatgaccttggcct 152 |||||||||||||||||||||| Sbjct: 78902 tgaaaagacatgaccttggcct 78923
>emb|AL357055.18| Human DNA sequence from clone RP11-389O22 on chromosome 1 Contains the 3' end of a novel gene, the 5' end of a novel gene, the LRIG2 gene for leucine-rich repeats and immunoglobulin-like domains 2, a ring finger protein 12 (RNF12) pseudogene, a ribosomal protein S19 (RPS19) pseudogene, a ribosomal protein S15 (RPS15) pseudogene and a CpG island, complete sequence Length = 188812 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 cctcccttcccctctgctcccc 40 |||||||||||||||||||||| Sbjct: 39196 cctcccttcccctctgctcccc 39217
>emb|CR855878.5| Human DNA sequence from clone RP13-469P20 on chromosome 1, complete sequence Length = 225410 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 131 tgaaaagacatgaccttggcct 152 |||||||||||||||||||||| Sbjct: 78935 tgaaaagacatgaccttggcct 78956
>gb|AC114814.5| Homo sapiens BAC clone RP11-1345D17 from 2, complete sequence Length = 181706 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 18 tcctcccttcccctctgctccc 39 |||||||||||||||||||||| Sbjct: 97519 tcctcccttcccctctgctccc 97540
>gb|AC102898.15| Mus musculus chromosome 7, clone RP24-321O23, complete sequence Length = 173253 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 15 ctttcctcccttcccctctgctcccc 40 |||||||||| ||||||||||||||| Sbjct: 139365 ctttcctcccctcccctctgctcccc 139390
>gb|AC123027.4| Mus musculus BAC clone RP24-550H11 from 3, complete sequence Length = 191211 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 246 ctctcgtcttcctcctcttcattcct 271 ||||| |||||||||||||||||||| Sbjct: 114694 ctctcctcttcctcctcttcattcct 114669
>gb|AC138329.4| Mus musculus BAC clone RP23-227L14 from 13, complete sequence Length = 240321 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctct 33 |||||||||||||||||||||| Sbjct: 210188 cccctttcctcccttcccctct 210167
>emb|AL606907.9| Mouse DNA sequence from clone RP23-230F2 on chromosome 4, complete sequence Length = 208265 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctctgctcccca 41 ||||||||||||| |||||||| ||||||| Sbjct: 146010 cccctttcctcccctcccctctcctcccca 145981
>gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, complete sequence Length = 178764 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 cctttcctcccttcccctctg 34 ||||||||||||||||||||| Sbjct: 146722 cctttcctcccttcccctctg 146702
>gb|AC110035.8| Mus musculus chromosome 1, clone RP23-237M24, complete sequence Length = 172559 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 cctttcctcccttcccctctg 34 ||||||||||||||||||||| Sbjct: 20555 cctttcctcccttcccctctg 20535
>ref|NM_184150.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2162 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 248 ctcgtcttcctcctcttcattcctc 272 ||||||||||||||||||| ||||| Sbjct: 20 ctcgtcttcctcctcttcactcctc 44
>gb|AC161793.9| Mus musculus chromosome 7, clone RP23-80J7, complete sequence Length = 268158 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cctttcctcccttcccctctgctcc 38 |||||||||||||||||||| |||| Sbjct: 257763 cctttcctcccttcccctctcctcc 257739
>gb|AC112953.15| Mus musculus chromosome 7, clone RP23-44J21, complete sequence Length = 205513 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cctttcctcccttcccctctgctcc 38 |||||||||||||||||||| |||| Sbjct: 196242 cctttcctcccttcccctctcctcc 196266
>gb|AC161375.4| Mus musculus BAC clone RP23-297A22 from chromosome 14, complete sequence Length = 211662 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 cccctttcctcccttcccctctgctcccc 40 |||||||| ||||||||||||| |||||| Sbjct: 73834 cccctttcttcccttcccctcttctcccc 73862
>ref|XM_587008.2| PREDICTED: Bos taurus hypothetical LOC509941 (LOC509941), mRNA Length = 764 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 19 cctcccttcccctctgctccccaag 43 ||||||||||||||| ||||||||| Sbjct: 569 cctcccttcccctcttctccccaag 593
>gb|AC145615.3| Homo sapiens BAC clone RP11-1217H2 from UL, complete sequence Length = 207889 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||| ||||| ||||||||||||||||| Sbjct: 34018 cccctctcctctcttcccctctgctcccc 34046
>gb|AF252828.5| Homo sapiens chromosome 8 clone RP11-245A18 map q24.13, complete sequence Length = 146712 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 tcttcctcctcttcattcctc 272 ||||||||||||||||||||| Sbjct: 138542 tcttcctcctcttcattcctc 138522
>gb|AF252827.5| Homo sapiens chromosome 8 clone RP11-166E20 map q24.13, complete sequence Length = 165347 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 tcttcctcctcttcattcctc 272 ||||||||||||||||||||| Sbjct: 31846 tcttcctcctcttcattcctc 31826
>gb|AC183830.2| Pan troglodytes BAC clone CH251-267I9 from chromosome 7, complete sequence Length = 157720 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||| |||||||||||||||| |||||| Sbjct: 62323 cccctctcctcccttcccctctcctcccc 62351
>gb|AC142384.2| Homo sapiens chromosome 16 clone RP11-293B20, complete sequence Length = 182907 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||| ||||| ||||||||||||||||| Sbjct: 101557 cccctctcctctcttcccctctgctcccc 101529
>gb|AC123924.4| Mus musculus BAC clone RP24-292A3 from chromosome 16, complete sequence Length = 159639 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||||||||||| |||||||| |||||| Sbjct: 62500 cccctttcctcccgtcccctctcctcccc 62472
>gb|AC134834.3| Mus musculus BAC clone RP24-320P15 from chromosome 18, complete sequence Length = 169143 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 ccctttcctcccttcccctct 33 ||||||||||||||||||||| Sbjct: 112787 ccctttcctcccttcccctct 112807
>gb|AC124416.4| Mus musculus BAC clone RP24-308I2 from chromosome 9, complete sequence Length = 184879 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||||||||||| |||||||| |||||| Sbjct: 175603 cccctttcctcccctcccctctcctcccc 175575
>gb|AC122816.4| Mus musculus BAC clone RP23-235N10 from chromosome 6, complete sequence Length = 177967 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctctgctcccc 40 |||||| |||||| ||||||||||||||| Sbjct: 101172 ccccttccctcccctcccctctgctcccc 101144
>gb|AC138619.4| Mus musculus BAC clone RP23-278M16 from chromosome 18, complete sequence Length = 170250 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 ccctttcctcccttcccctct 33 ||||||||||||||||||||| Sbjct: 104685 ccctttcctcccttcccctct 104665
>gb|AC127536.5| Homo sapiens chromosome 15, clone RP11-1181H2, complete sequence Length = 168996 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||| ||||| ||||||||||||||||| Sbjct: 132833 cccctctcctctcttcccctctgctcccc 132805
>gb|AC005049.2| Homo sapiens BAC clone CTB-23I15 from 7, complete sequence Length = 106928 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||| |||||||||||||||| |||||| Sbjct: 20663 cccctctcctcccttcccctctcctcccc 20691
>emb|CR974413.1| M.murinus DNA sequence from clone CH257-4B4, complete sequence Length = 270722 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cccttcccctctgctccccaa 42 ||||||||||||||||||||| Sbjct: 20426 cccttcccctctgctccccaa 20446
>gb|AC094784.13| Rattus norvegicus 11 BAC CH230-4O6 (Children's Hospital Oakland Research Institute) complete sequence Length = 228501 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctc 32 ||||||||||||||||||||| Sbjct: 41875 cccctttcctcccttcccctc 41855
>emb|AL353662.19| Human DNA sequence from clone RP11-571F15 on chromosome 9 Contains the UBAP gene for ubiquitin associated protein, the gene for a novel protein similar to kinesin-like proteins, the KIF24 gene for kinesin family member 24 (FLJ10933), ribosomal protein S8 (RPS8) and L35A (RPL35A) pseudogenes, a serine (or cysteine) proteinase inhibitor (collagen binding protein 1) (SERPINH1) pseudogene, the 5' end of the NUDT2 gene for nudix (nucleoside diphosphate linked moiety X)-type motif 2 and three CpG islands, complete sequence Length = 167998 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 ctcccttcccctctgctcccc 40 ||||||||||||||||||||| Sbjct: 52376 ctcccttcccctctgctcccc 52396
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 acaacaatttcttgagcaaag 331 ||||||||||||||||||||| Sbjct: 4301175 acaacaatttcttgagcaaag 4301155
>emb|AL929371.6| Mouse DNA sequence from clone RP23-176O5 on chromosome 11 Contains a ribosomal protein S2 (Rps2) pseudogene, a novel gene, an apurinic/apyrimidinic endonuclease 2 (Apex2) pseudogene, the Rtn4 gene for reticulon 4, the 3' end of the gene for a novel protein (C230094A16Rik) (MGC38936) and a CpG island, complete sequence Length = 212042 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||| |||||||||||||||| |||||| Sbjct: 102724 cccctctcctcccttcccctctcctcccc 102752
>gb|AC090753.10| Homo sapiens chromosome 8, clone RP11-245A18, complete sequence Length = 146552 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 tcttcctcctcttcattcctc 272 ||||||||||||||||||||| Sbjct: 8172 tcttcctcctcttcattcctc 8192
>gb|AC154127.2| Ornithorhynchus anatinus BAC clone OABb-20A1 from chromosome unknown, complete sequence Length = 188107 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 tcctcccttcccctctgctcc 38 ||||||||||||||||||||| Sbjct: 154188 tcctcccttcccctctgctcc 154208
>gb|AC114300.2| Homo sapiens chromosome 5 clone RP11-136H13, complete sequence Length = 151166 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 cctctcgtcttcctcctcttc 265 ||||||||||||||||||||| Sbjct: 124513 cctctcgtcttcctcctcttc 124533
>gb|AC100871.2| Homo sapiens chromosome 8, clone RP11-959I15, complete sequence Length = 215314 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 tcttcctcctcttcattcctc 272 ||||||||||||||||||||| Sbjct: 186682 tcttcctcctcttcattcctc 186702
>gb|AC105460.4| Homo sapiens BAC clone RP11-297P16 from 4, complete sequence Length = 185755 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 cccctttcctcccttcccctc 32 ||||||||||||||||||||| Sbjct: 33131 cccctttcctcccttcccctc 33151
>gb|AC092342.3| Homo sapiens chromosome 16 clone RP11-264M14, complete sequence Length = 170324 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||| ||||| ||||||||||||||||| Sbjct: 30402 cccctctcctctcttcccctctgctcccc 30430
>gb|AC161372.2| Mus musculus BAC clone RP23-326G14 from chromosome 16, complete sequence Length = 208994 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||||||||||| |||||||| |||||| Sbjct: 22553 cccctttcctcccgtcccctctcctcccc 22581
>gb|AC159198.2| Mus musculus BAC clone RP23-388C15 from chromosome 12, complete sequence Length = 213311 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||| |||||||||||||||| |||||| Sbjct: 96158 cccctctcctcccttcccctctcctcccc 96186
>gb|AC159812.2| Mus musculus BAC clone RP24-86O15 from chromosome 9, complete sequence Length = 204400 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||||||||||| |||||||| |||||| Sbjct: 22875 cccctttcctcccctcccctctcctcccc 22847
>dbj|AK049812.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630001F15 product:hypothetical protein, full insert sequence Length = 2863 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ccggcccctttcctcccttcc 28 ||||||||||||||||||||| Sbjct: 852 ccggcccctttcctcccttcc 872
>gb|AC139476.3| Homo sapiens chromosome 16 clone RP11-341P6, complete sequence Length = 189057 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||| ||||| ||||||||||||||||| Sbjct: 128914 cccctctcctctcttcccctctgctcccc 128942
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 248 ctcgtcttcctcctcttcattcctc 272 ||||||||||||||||||| ||||| Sbjct: 1229488 ctcgtcttcctcctcttcactcctc 1229464
>gb|AC093584.3| Homo sapiens BAC clone RP13-531E5 from 4, complete sequence Length = 99897 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 gcccctttcctcccttcccct 31 ||||||||||||||||||||| Sbjct: 92490 gcccctttcctcccttcccct 92510
>gb|AC157658.2| Mus musculus BAC clone RP23-331E4 from chromosome 12, complete sequence Length = 203717 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 ccctttcctcccttcccctct 33 ||||||||||||||||||||| Sbjct: 97037 ccctttcctcccttcccctct 97017
>gb|AC004674.1| Homo sapiens X BAC GSHB-600G8 (Genome Systems Human BAC library) complete sequence Length = 158886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 ctcccttcccctctgctcccc 40 ||||||||||||||||||||| Sbjct: 125559 ctcccttcccctctgctcccc 125579
>gb|AC134678.7| Homo sapiens chromosome 15, clone RP13-199M12, complete sequence Length = 200389 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||| ||||| ||||||||||||||||| Sbjct: 147203 cccctctcctctcttcccctctgctcccc 147231
>gb|AC136877.2| Homo sapiens chromosome 16 clone RP11-1258I11, complete sequence Length = 180454 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||| ||||| ||||||||||||||||| Sbjct: 38615 cccctctcctctcttcccctctgctcccc 38643
>dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445D12 Length = 140952 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 248 ctcgtcttcctcctcttcattcctc 272 ||||||||||||||||||| ||||| Sbjct: 23142 ctcgtcttcctcctcttcactcctc 23118
>dbj|AK120079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013012G06, full insert sequence Length = 2477 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 248 ctcgtcttcctcctcttcattcctc 272 ||||||||||||||||||| ||||| Sbjct: 20 ctcgtcttcctcctcttcactcctc 44
>gb|AC113281.15| Mus musculus chromosome 5, clone RP23-393G8, complete sequence Length = 197920 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 tcctcccttcccctctgctcc 38 ||||||||||||||||||||| Sbjct: 115912 tcctcccttcccctctgctcc 115892
>gb|AC124210.3| Homo sapiens chromosome 8 clone RP11-755E24 map q24.13, complete sequence Length = 138875 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 tcttcctcctcttcattcctc 272 ||||||||||||||||||||| Sbjct: 29762 tcttcctcctcttcattcctc 29742
>gb|AC122394.5| Mus musculus BAC clone RP24-85N8 from 6, complete sequence Length = 215914 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctctgctcccc 40 ||||||||||||| |||||||| |||||| Sbjct: 148287 cccctttcctcccctcccctctcctcccc 148259
>emb|AL611927.21| Mouse DNA sequence from clone RP23-445E20 on chromosome 4, complete sequence Length = 111802 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ccggcccctttcctcccttcc 28 ||||||||||||||||||||| Sbjct: 10221 ccggcccctttcctcccttcc 10201
>emb|AL928700.7| Mouse DNA sequence from clone RP23-388J20 on chromosome 2, complete sequence Length = 158364 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 244 tcctctcgtcttcctcctcttcatt 268 ||||||| ||||||||||||||||| Sbjct: 46401 tcctctcttcttcctcctcttcatt 46425
>emb|AL606915.12| Mouse DNA sequence from clone RP23-185C16 on chromosome 4, complete sequence Length = 182248 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctctgctcccc 40 |||||| ||||||||||||||| |||||| Sbjct: 83979 ccccttccctcccttcccctctcctcccc 83951
>gb|AC167364.3| Mus musculus BAC clone RP23-41J3 from chromosome 12, complete sequence Length = 204336 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tcctcccttcccctctgctc 37 |||||||||||||||||||| Sbjct: 3278 tcctcccttcccctctgctc 3259
>ref|XM_473035.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2262 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 183 atggcgtcaagggcaatcattaggagaagaaagtat 218 ||||| || ||||| |||||||||||||| |||||| Sbjct: 1 atggcctcgagggcgatcattaggagaaggaagtat 36
>gb|AC166934.3| Mus musculus chromosome 5, clone RP23-246A17, complete sequence Length = 144203 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ccctttcctcccttcccctc 32 |||||||||||||||||||| Sbjct: 136506 ccctttcctcccttcccctc 136525
>gb|BC077389.1| Xenopus laevis ubiquitin specific protease 25, mRNA (cDNA clone MGC:81666 IMAGE:6864548), complete cds Length = 3919 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tccggagctgctctttgtcc 105 |||||||||||||||||||| Sbjct: 2317 tccggagctgctctttgtcc 2298
>gb|AC091274.11| Mus musculus chromosome 5, clone RP23-149A1, complete sequence Length = 212532 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 ccctttcctcccttcccctc 32 |||||||||||||||||||| Sbjct: 109950 ccctttcctcccttcccctc 109931
>gb|AC166989.4| Mus musculus BAC clone RP24-345J5 from chromosome 16, complete sequence Length = 232228 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 tcttcctcctcttcattcctccat 275 |||||| ||||||||||||||||| Sbjct: 117120 tcttccacctcttcattcctccat 117143
>gb|AC138738.5| Mus musculus chromosome 3, clone RP24-293C5, complete sequence Length = 149426 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cccttcccctctgctcccca 41 |||||||||||||||||||| Sbjct: 9048 cccttcccctctgctcccca 9067
>gb|BC073331.1| Xenopus laevis MGC80741 protein, mRNA (cDNA clone MGC:80741 IMAGE:5512253), complete cds Length = 3915 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ctcgtcttcctcctcttcat 267 |||||||||||||||||||| Sbjct: 2644 ctcgtcttcctcctcttcat 2625
>gb|AF016415.1| Caenorhabditis elegans cosmid C02A12, complete sequence Length = 24045 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gaaggtgagtagcaaccaat 181 |||||||||||||||||||| Sbjct: 15995 gaaggtgagtagcaaccaat 16014
>gb|AC134166.2| Rattus norvegicus 2 BAC CH230-355N20 (Children's Hospital Oakland Research Institute) complete sequence Length = 191583 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 tcctctcgtcttcctcctct 263 |||||||||||||||||||| Sbjct: 109403 tcctctcgtcttcctcctct 109422
>gb|AC171894.2| Capitella capitata clone JGIBGZA-13N6, complete sequence Length = 36228 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 agtgtcaattttacaaaggg 391 |||||||||||||||||||| Sbjct: 31764 agtgtcaattttacaaaggg 31783
>ref|XM_752303.1| Ustilago maydis 521 hypothetical protein (UM01249.1) partial mRNA Length = 333 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 tgctctttgtccgtggagat 113 |||||||||||||||||||| Sbjct: 278 tgctctttgtccgtggagat 297
>gb|AC124444.4| Mus musculus BAC clone RP24-185P7 from chromosome 7, complete sequence Length = 184996 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 tcccggcccctttcctccct 25 |||||||||||||||||||| Sbjct: 142452 tcccggcccctttcctccct 142433
>gb|AC127250.3| Mus musculus BAC clone RP24-482H23 from chromosome 3, complete sequence Length = 136942 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctctgctccc 39 ||||| |||||||||||||||| ||||| Sbjct: 92981 cccctctcctcccttcccctcttctccc 92954
>gb|AC121905.3| Mus musculus BAC clone RP24-176A1 from chromosome 3, complete sequence Length = 178517 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 tagcacaacaatttcttgag 326 |||||||||||||||||||| Sbjct: 149858 tagcacaacaatttcttgag 149877
>gb|AC122912.2| Mus musculus BAC clone RP23-61E5 from 7, complete sequence Length = 255062 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 tcccggcccctttcctccct 25 |||||||||||||||||||| Sbjct: 210224 tcccggcccctttcctccct 210243
>gb|AC136507.19| Medicago truncatula clone mth2-24o19, complete sequence Length = 131025 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 cctcttcattcctccatgga 278 |||||||||||||||||||| Sbjct: 74230 cctcttcattcctccatgga 74211
>gb|AC146941.8| Medicago truncatula clone mth2-133o10, complete sequence Length = 134901 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cctcttcattcctccatgga 278 |||||||||||||||||||| Sbjct: 83667 cctcttcattcctccatgga 83686
>emb|AL158093.8| Human DNA sequence from clone RP5-959I16 on chromosome 20 Contains STSs, GSSs and a CpG island, complete sequence Length = 112674 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 gcccctttcctcccttcccc 30 |||||||||||||||||||| Sbjct: 80916 gcccctttcctcccttcccc 80935
>emb|AL157895.8| Human DNA sequence from clone RP11-354E11 on chromosome 10 Contains the 5' end of a novel gene and a novel gene, complete sequence Length = 166317 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cctttcctcccttcccctct 33 |||||||||||||||||||| Sbjct: 27064 cctttcctcccttcccctct 27045
>emb|BX066270.1|CNS09NAQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC5CA11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 951 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 ctcgtcttcctcctcttcat 267 |||||||||||||||||||| Sbjct: 732 ctcgtcttcctcctcttcat 751
>ref|XM_965136.1| PREDICTED: Tribolium castaneum similar to CG3848-PC, isoform C (LOC658776), mRNA Length = 15537 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 aacaatttcttgagcaaagc 332 |||||||||||||||||||| Sbjct: 11891 aacaatttcttgagcaaagc 11872
>emb|BX032835.1|CNS08XHZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA48DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 354 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 ctcgtcttcctcctcttcat 267 |||||||||||||||||||| Sbjct: 280 ctcgtcttcctcctcttcat 299
>emb|BX032834.1|CNS08XHY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA48DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 931 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ctcgtcttcctcctcttcat 267 |||||||||||||||||||| Sbjct: 430 ctcgtcttcctcctcttcat 411
>emb|BX022533.1|CNS08PJT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA34CA03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 966 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 ctcgtcttcctcctcttcat 267 |||||||||||||||||||| Sbjct: 721 ctcgtcttcctcctcttcat 740
>emb|BX022532.1|CNS08PJS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA34CA03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 981 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ctcgtcttcctcctcttcat 267 |||||||||||||||||||| Sbjct: 448 ctcgtcttcctcctcttcat 429
>emb|BX018562.1|CNS08MHI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA28AG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 836 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 ctcgtcttcctcctcttcat 267 |||||||||||||||||||| Sbjct: 727 ctcgtcttcctcctcttcat 746
>emb|BX018561.1|CNS08MHH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA28AG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 884 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ctcgtcttcctcctcttcat 267 |||||||||||||||||||| Sbjct: 436 ctcgtcttcctcctcttcat 417
>emb|BX017764.1|CNS08LVC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA26DE03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 793 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 ctcgtcttcctcctcttcat 267 |||||||||||||||||||| Sbjct: 739 ctcgtcttcctcctcttcat 758
>emb|BX017763.1|CNS08LVB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA26DE03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 943 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ctcgtcttcctcctcttcat 267 |||||||||||||||||||| Sbjct: 435 ctcgtcttcctcctcttcat 416
>gb|AC078911.11| Mus musculus Strain C57BL6/J Chromosome 2 RP23-111A22, complete sequence Length = 200329 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 13 ccctttcctcccttcccctctgctcccc 40 ||||||||||||| ||||||| |||||| Sbjct: 1863 ccctttcctccctccccctctcctcccc 1836
>dbj|AK137841.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130024G16 product:demethyl-Q 7, full insert sequence Length = 3071 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 tcccggcccctttcctccct 25 |||||||||||||||||||| Sbjct: 3041 tcccggcccctttcctccct 3022
>gb|AC139319.6| Mus musculus BAC clone RP24-439B16 from chromosome 12, complete sequence Length = 189003 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 tcctcccttcccctctgctc 37 |||||||||||||||||||| Sbjct: 40039 tcctcccttcccctctgctc 40058
>gb|AC025284.4|AC025284 Homo sapiens chromosome 16 clone RP11-449J10, complete sequence Length = 164603 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 13 ccctttcctcccttcccctctgctcccc 40 ||||| ||||||||||||||| |||||| Sbjct: 77614 cccttccctcccttcccctctcctcccc 77587
>gb|AC009516.19| Homo sapiens chromosome 22 clone p393 map 22q11, complete sequence Length = 169237 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggagctgctctttgtccgtg 108 |||||||||||||||||||| Sbjct: 104878 ggagctgctctttgtccgtg 104897
>gb|AC018751.30| Homo sapiens clone b9j16, complete sequence Length = 166447 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ggagctgctctttgtccgtg 108 |||||||||||||||||||| Sbjct: 82984 ggagctgctctttgtccgtg 82965
>gb|AF285233.1|AF285233 Mus musculus tissue-nonspecific alkaline phosphatase gene, complete cds Length = 17438 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 ccctttcctcccttcccctctgct 36 ||||| |||||||||||||||||| Sbjct: 14504 cccttccctcccttcccctctgct 14527
>gb|AC009957.11| Homo sapiens BAC clone RP11-285H23 from 2, complete sequence Length = 191119 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 12 cccctttcctcccttcccctctgctccc 39 ||||| |||||||||||||||| ||||| Sbjct: 148266 cccctctcctcccttcccctctcctccc 148239
>gb|AC010207.18| Homo sapiens 3 BAC RP11-375I20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184582 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ccctttcctcccttcccctc 32 |||||||||||||||||||| Sbjct: 8644 ccctttcctcccttcccctc 8663
>gb|AC010643.5|AC010643 Homo sapiens chromosome 19 clone LLNLR-254A7, complete sequence Length = 38902 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cctcccttcccctctgctcc 38 |||||||||||||||||||| Sbjct: 12756 cctcccttcccctctgctcc 12737
>emb|AL928862.13| Mouse DNA sequence from clone RP23-88J10 on chromosome 2, complete sequence Length = 143650 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 13 ccctttcctcccttcccctctgctcccc 40 ||||||||||||| ||||||| |||||| Sbjct: 83911 ccctttcctccctccccctctcctcccc 83884
>emb|CR942577.2| Xenopus tropicalis finished cDNA, clone TGas096a09 Length = 3907 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tccggagctgctctttgtcc 105 |||||||||||||||||||| Sbjct: 2361 tccggagctgctctttgtcc 2342
>dbj|AP001025.6| Homo sapiens genomic DNA, chromosome 18 clone:RP11-838N2, complete sequence Length = 218371 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 gggctccatctgaaaagaca 140 |||||||||||||||||||| Sbjct: 55524 gggctccatctgaaaagaca 55543
>gb|AC163671.5| Mus musculus BAC clone RP23-21K2 from chromosome 3, complete sequence Length = 215382 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 12 cccctttcctcccttcccctctgctccc 39 ||||| |||||||||||||||| ||||| Sbjct: 168097 cccctctcctcccttcccctcttctccc 168124
>gb|AC132239.4| Mus musculus BAC clone RP24-534D4 from 13, complete sequence Length = 163009 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ccctttcctcccttcccctc 32 |||||||||||||||||||| Sbjct: 86945 ccctttcctcccttcccctc 86964
>gb|AC140429.2| Mus musculus BAC clone RP23-105O12 from 5, complete sequence Length = 203266 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ccctttcctcccttcccctc 32 |||||||||||||||||||| Sbjct: 97924 ccctttcctcccttcccctc 97943
>emb|AL805954.9| Mouse DNA sequence from clone RP23-277N22 on chromosome 4, complete sequence Length = 127548 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 ccctttcctcccttcccctctgct 36 ||||| |||||||||||||||||| Sbjct: 122811 cccttccctcccttcccctctgct 122788
>gb|AC115939.8| Mus musculus chromosome 3, clone RP24-549I13, complete sequence Length = 178373 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cccttcccctctgctcccca 41 |||||||||||||||||||| Sbjct: 9160 cccttcccctctgctcccca 9141
>emb|AL606982.21| Mouse DNA sequence from clone RP23-354C15 on chromosome 4, complete sequence Length = 209339 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 13 ccctttcctcccttcccctctgctcccc 40 ||||| |||||| ||||||||||||||| Sbjct: 177374 cccttccctcccctcccctctgctcccc 177347
>gb|AC160635.2| Mus musculus BAC clone RP23-396N20 from chromosome 9, complete sequence Length = 207088 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 tttggttttaagcctgagcc 301 |||||||||||||||||||| Sbjct: 149870 tttggttttaagcctgagcc 149851
>dbj|AP000553.1| Homo sapiens genomic DNA, chromosome 22q11.2, BCRL2 region, clone:KB1440D3 Length = 164946 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggagctgctctttgtccgtg 108 |||||||||||||||||||| Sbjct: 32223 ggagctgctctttgtccgtg 32242 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,619,098 Number of Sequences: 3902068 Number of extensions: 4619098 Number of successful extensions: 118348 Number of sequences better than 10.0: 130 Number of HSP's better than 10.0 without gapping: 130 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117859 Number of HSP's gapped (non-prelim): 489 length of query: 449 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 427 effective length of database: 17,147,199,772 effective search space: 7321854302644 effective search space used: 7321854302644 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
