Clone Name | bastl56g08 |
---|---|
Clone Library Name | barley_pub |
>V70K_EPMV (P20129) 70 kDa protein| Length = 649 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/52 (36%), Positives = 24/52 (46%) Frame = +3 Query: 102 PPSLYARSALLPASDSLDPAS*FPPRPNPSIQGAGSFGATT*RSIFRCSCAP 257 P SL R+ L A S D + PP P+PS + SF + T F C P Sbjct: 547 PSSLSLRTFLDSAVISCDSSPVLPPSPSPSSHSSSSFQSCTSPPRFPCYPPP 598
>ALDO4_ARATH (Q7G191) Aldehyde oxidase 4 (EC 1.2.3.1) (AtAO-4) (AtAO2)| Length = 1337 Score = 29.3 bits (64), Expect = 2.3 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = -2 Query: 285 NTASENCLPAERSCSGIWISM*LHQMNQHLE 193 +T SENC A R C GI + MNQ LE Sbjct: 1090 STTSENCCEAVRLCCGILVERLRPTMNQILE 1120
>VRP1_YEAST (P37370) Verprolin| Length = 817 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +3 Query: 93 PHPPPSLYARSALLPASDSLDPAS*FPPRPNPSI 194 P PPP ++ S+ L AS P + PP P PS+ Sbjct: 402 PPPPPGAFSTSSALSASSI--PLAPLPPPPPPSV 433
>RNAS9_PONPY (Q7YRH4) Ribonuclease-like protein 9 precursor| Length = 204 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = -3 Query: 344 RSIAFVHRMVARNYFILVNKIRLQRIVFLR 255 +++ + HR VA +YF+L+ LQ+I + R Sbjct: 89 KNVYYKHRCVAEHYFLLMQYDELQKICYNR 118
>AB1IP_HUMAN (Q7Z5R6) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) (Rap1-GTP-interacting adapter molecule) (RIAM) (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich protein 73) (Retinoic ac Length = 666 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Frame = +3 Query: 93 PHPPPSLYARSALLPASDSLDPAS*FPPRPNPSIQG-AGS 209 P PPP L P D ++P F P P PS G AGS Sbjct: 557 PPPPPPLDDPELPPPPPDFMEPPPDFVPPPPPSYAGIAGS 596
>RELB_CHICK (P51509) Transcription factor RelB homolog| Length = 549 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 8/49 (16%) Frame = +3 Query: 99 PPPSLYARSALLPASDS--------LDPAS*FPPRPNPSIQGAGSFGAT 221 PPP A LPA+D LDP S PP P I S+ T Sbjct: 450 PPPGFMDHFAPLPAADEAFALLADPLDPLSHLPPPSTPQILWGRSYFRT 498
>RNAS9_HUMAN (P60153) Ribonuclease-like protein 9 precursor| Length = 205 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = -3 Query: 344 RSIAFVHRMVARNYFILVNKIRLQRIVFLR 255 +++ + HR VA +YF+L+ LQ+I + R Sbjct: 90 KNVYYKHRWVAEHYFLLMQYDELQKICYNR 119
>RNAS9_GORGO (Q863K0) Ribonuclease-like protein 9 precursor| Length = 205 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = -3 Query: 344 RSIAFVHRMVARNYFILVNKIRLQRIVFLR 255 +++ + HR VA +YF+L+ LQ+I + R Sbjct: 90 KNVYYKHRCVAEHYFLLMQYDELQKICYNR 119
>HGDC_ACIFE (P11568) Activator of (R)-2-hydroxyglutaryl-CoA dehydratase| (2-hydroxyglutaryl-CoA dehydratase component A) Length = 260 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/50 (28%), Positives = 22/50 (44%) Frame = -3 Query: 380 IILSLDNALSRARSIAFVHRMVARNYFILVNKIRLQRIVFLRSAAAAEYG 231 +I L + IA +HR VA L N++ + + V + A YG Sbjct: 174 VISQLSKGTDKIDIIAGIHRSVASRVIGLANRVGIVKDVVMTGGVAQNYG 223
>RNAS9_PANTR (Q863K1) Ribonuclease-like protein 9 precursor| Length = 205 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -3 Query: 344 RSIAFVHRMVARNYFILVNKIRLQRIVFLR 255 +++ + HR VA YF+L+ LQ+I + R Sbjct: 90 KNVYYKHRCVAERYFLLMQYDELQKICYNR 119 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,034,784 Number of Sequences: 219361 Number of extensions: 861416 Number of successful extensions: 1769 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1679 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1763 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)