ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl56g08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1V70K_EPMV (P20129) 70 kDa protein 30 1.8
2ALDO4_ARATH (Q7G191) Aldehyde oxidase 4 (EC 1.2.3.1) (AtAO-4) (A... 29 2.3
3VRP1_YEAST (P37370) Verprolin 28 4.0
4RNAS9_PONPY (Q7YRH4) Ribonuclease-like protein 9 precursor 28 6.8
5AB1IP_HUMAN (Q7Z5R6) Amyloid beta A4 precursor protein-binding f... 28 6.8
6RELB_CHICK (P51509) Transcription factor RelB homolog 28 6.8
7RNAS9_HUMAN (P60153) Ribonuclease-like protein 9 precursor 28 6.8
8RNAS9_GORGO (Q863K0) Ribonuclease-like protein 9 precursor 28 6.8
9HGDC_ACIFE (P11568) Activator of (R)-2-hydroxyglutaryl-CoA dehyd... 27 8.9
10RNAS9_PANTR (Q863K1) Ribonuclease-like protein 9 precursor 27 8.9

>V70K_EPMV (P20129) 70 kDa protein|
          Length = 649

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = +3

Query: 102 PPSLYARSALLPASDSLDPAS*FPPRPNPSIQGAGSFGATT*RSIFRCSCAP 257
           P SL  R+ L  A  S D +   PP P+PS   + SF + T    F C   P
Sbjct: 547 PSSLSLRTFLDSAVISCDSSPVLPPSPSPSSHSSSSFQSCTSPPRFPCYPPP 598



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>ALDO4_ARATH (Q7G191) Aldehyde oxidase 4 (EC 1.2.3.1) (AtAO-4) (AtAO2)|
          Length = 1337

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -2

Query: 285  NTASENCLPAERSCSGIWISM*LHQMNQHLE 193
            +T SENC  A R C GI +      MNQ LE
Sbjct: 1090 STTSENCCEAVRLCCGILVERLRPTMNQILE 1120



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>VRP1_YEAST (P37370) Verprolin|
          Length = 817

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 93  PHPPPSLYARSALLPASDSLDPAS*FPPRPNPSI 194
           P PPP  ++ S+ L AS    P +  PP P PS+
Sbjct: 402 PPPPPGAFSTSSALSASSI--PLAPLPPPPPPSV 433



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>RNAS9_PONPY (Q7YRH4) Ribonuclease-like protein 9 precursor|
          Length = 204

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -3

Query: 344 RSIAFVHRMVARNYFILVNKIRLQRIVFLR 255
           +++ + HR VA +YF+L+    LQ+I + R
Sbjct: 89  KNVYYKHRCVAEHYFLLMQYDELQKICYNR 118



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>AB1IP_HUMAN (Q7Z5R6) Amyloid beta A4 precursor protein-binding family B member|
           1-interacting protein (APBB1-interacting protein 1)
           (Rap1-GTP-interacting adapter molecule) (RIAM)
           (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich
           protein 73) (Retinoic ac
          Length = 666

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +3

Query: 93  PHPPPSLYARSALLPASDSLDPAS*FPPRPNPSIQG-AGS 209
           P PPP L       P  D ++P   F P P PS  G AGS
Sbjct: 557 PPPPPPLDDPELPPPPPDFMEPPPDFVPPPPPSYAGIAGS 596



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>RELB_CHICK (P51509) Transcription factor RelB homolog|
          Length = 549

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 8/49 (16%)
 Frame = +3

Query: 99  PPPSLYARSALLPASDS--------LDPAS*FPPRPNPSIQGAGSFGAT 221
           PPP      A LPA+D         LDP S  PP   P I    S+  T
Sbjct: 450 PPPGFMDHFAPLPAADEAFALLADPLDPLSHLPPPSTPQILWGRSYFRT 498



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>RNAS9_HUMAN (P60153) Ribonuclease-like protein 9 precursor|
          Length = 205

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -3

Query: 344 RSIAFVHRMVARNYFILVNKIRLQRIVFLR 255
           +++ + HR VA +YF+L+    LQ+I + R
Sbjct: 90  KNVYYKHRWVAEHYFLLMQYDELQKICYNR 119



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>RNAS9_GORGO (Q863K0) Ribonuclease-like protein 9 precursor|
          Length = 205

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -3

Query: 344 RSIAFVHRMVARNYFILVNKIRLQRIVFLR 255
           +++ + HR VA +YF+L+    LQ+I + R
Sbjct: 90  KNVYYKHRCVAEHYFLLMQYDELQKICYNR 119



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>HGDC_ACIFE (P11568) Activator of (R)-2-hydroxyglutaryl-CoA dehydratase|
           (2-hydroxyglutaryl-CoA dehydratase component A)
          Length = 260

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = -3

Query: 380 IILSLDNALSRARSIAFVHRMVARNYFILVNKIRLQRIVFLRSAAAAEYG 231
           +I  L     +   IA +HR VA     L N++ + + V +    A  YG
Sbjct: 174 VISQLSKGTDKIDIIAGIHRSVASRVIGLANRVGIVKDVVMTGGVAQNYG 223



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>RNAS9_PANTR (Q863K1) Ribonuclease-like protein 9 precursor|
          Length = 205

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 344 RSIAFVHRMVARNYFILVNKIRLQRIVFLR 255
           +++ + HR VA  YF+L+    LQ+I + R
Sbjct: 90  KNVYYKHRCVAERYFLLMQYDELQKICYNR 119


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,034,784
Number of Sequences: 219361
Number of extensions: 861416
Number of successful extensions: 1769
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1763
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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