ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl56g07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CMTA5_ARATH (O23463) Calmodulin-binding transcription activator ... 209 3e-54
2CMTA6_ARATH (Q9LSP8) Calmodulin-binding transcription activator ... 176 2e-44
3CMTA2_ARATH (Q6NPP4) Calmodulin-binding transcription activator ... 160 2e-39
4CMTA1_ARATH (Q9FY74) Calmodulin-binding transcription activator ... 153 2e-37
5CMTA3_ARATH (Q8GSA7) Calmodulin-binding transcription activator ... 152 5e-37
6CMTA4_ARATH (Q9FYG2) Calmodulin-binding transcription activator ... 136 3e-32
7CMTA1_HUMAN (Q9Y6Y1) Calmodulin-binding transcription activator 1 90 3e-18
8CMTA2_HUMAN (O94983) Calmodulin-binding transcription activator 2 89 6e-18
9CMTA2_MOUSE (Q80Y50) Calmodulin-binding transcription activator 2 84 1e-16
10IRK1_HUMAN (P48048) ATP-sensitive inward rectifier potassium cha... 31 1.4
11ALGG_PSEFL (P59828) Poly(beta-D-mannuronate) C5 epimerase precur... 30 3.1
12HIP_MYTED (P83425) Heavy metal binding protein HIP 30 4.0
13SCN7A_HUMAN (Q01118) Sodium channel protein type 7 alpha subunit... 29 5.2
14IRK1_MOUSE (O88335) ATP-sensitive inward rectifier potassium cha... 29 6.8
15IRK1_RAT (P35560) ATP-sensitive inward rectifier potassium chann... 29 6.8
16CX045_HUMAN (Q9H5U8) Protein CXorf45 29 6.8
17SAT3_ARATH (Q39218) Serine acetyltransferase 3, mitochondrial pr... 29 6.8
18IMDH_SHIFL (P0ADG9) Inosine-5'-monophosphate dehydrogenase (EC 1... 28 8.9
19IMDH_ECOLI (P0ADG7) Inosine-5'-monophosphate dehydrogenase (EC 1... 28 8.9
20IMDH_ECO57 (P0ADG8) Inosine-5'-monophosphate dehydrogenase (EC 1... 28 8.9
21TRMU_MYCPE (Q8CXQ3) Probable tRNA (5-methylaminomethyl-2-thiouri... 28 8.9

>CMTA5_ARATH (O23463) Calmodulin-binding transcription activator 5|
           (Signal-responsive protein 6) (Ethylene-induced
           calmodulin-binding protein f) (EICBP.f)
          Length = 923

 Score =  209 bits (532), Expect = 3e-54
 Identities = 94/143 (65%), Positives = 115/143 (80%)
 Frame = +3

Query: 33  AGRERDPLLRSEIHGFITYADLNFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQPIDK 212
           AG +   L+ SEIHGF T  DL+ + +  EA SRW RPNEI+A+L NH+ F ++ +P++ 
Sbjct: 2   AGVDSGKLIGSEIHGFHTLQDLDIQTMLDEAYSRWLRPNEIHALLCNHKFFTINVKPVNL 61

Query: 213 PVSGTIVLYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPN 392
           P SGTIVL+DRK++RNFRKDGHNWKKKKDGKT++EAHE LK+GNEER+HVYYA GED P 
Sbjct: 62  PKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNEERIHVYYAHGEDTPT 121

Query: 393 FFRRCYWLLDKEAERIVLVHYRQ 461
           F RRCYWLLDK  E IVLVHYR+
Sbjct: 122 FVRRCYWLLDKSQEHIVLVHYRE 144



to top

>CMTA6_ARATH (Q9LSP8) Calmodulin-binding transcription activator 6|
           (Signal-responsive protein 3) (Ethylene-induced
           calmodulin-binding protein e) (EICBP.e)
           (Ethylene-induced calmodulin-binding protein 5) (EICBP5)
          Length = 838

 Score =  176 bits (447), Expect = 2e-44
 Identities = 84/135 (62%), Positives = 98/135 (72%)
 Frame = +3

Query: 54  LLRSEIHGFITYADLNFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIV 233
           L+ SEIHGF T  DL+ + +  EA SRW RPNEI+A+L                  G I+
Sbjct: 9   LIGSEIHGFHTLQDLDVQTMLEEAKSRWLRPNEIHAILC-----------------GRII 51

Query: 234 LYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNFFRRCYW 413
           L+DRK++RNFRKDGHNWKKKKDG+TV+EAHE LK+GNEER+HVYYA GEDN  F RRCYW
Sbjct: 52  LFDRKMLRNFRKDGHNWKKKKDGRTVKEAHEHLKVGNEERIHVYYAHGEDNTTFVRRCYW 111

Query: 414 LLDKEAERIVLVHYR 458
           LLDK  E IVLVHYR
Sbjct: 112 LLDKARENIVLVHYR 126



to top

>CMTA2_ARATH (Q6NPP4) Calmodulin-binding transcription activator 2|
           (Signal-responsive protein 4) (Ethylene-induced
           calmodulin-binding protein c) (EICBP.c) (AtER66)
          Length = 1050

 Score =  160 bits (405), Expect = 2e-39
 Identities = 69/120 (57%), Positives = 95/120 (79%)
 Frame = +3

Query: 96  LNFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIVLYDRKVVRNFRKDG 275
           L+ ++L +EA  RW RP EI  +L NH++F + ++P ++P SG++ L+DRKV+R FRKDG
Sbjct: 13  LDIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDG 72

Query: 276 HNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNFFRRCYWLLDKEAERIVLVHY 455
           HNW+KKKDGKTV+EAHEKLK+G+ + +H YYA GEDN NF RRCYW+L+++   IV VHY
Sbjct: 73  HNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHY 132



to top

>CMTA1_ARATH (Q9FY74) Calmodulin-binding transcription activator 1|
           (Signal-responsive protein 2) (Ethylene-induced
           calmodulin-binding protein b) (EICBP.b)
          Length = 1007

 Score =  153 bits (387), Expect = 2e-37
 Identities = 67/122 (54%), Positives = 91/122 (74%)
 Frame = +3

Query: 96  LNFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIVLYDRKVVRNFRKDG 275
           L+ E+L +EA  RW RP EI  +L N+ +F + ++   +P SG++ L+DRKV+R FRKDG
Sbjct: 16  LDMEQLLSEAQHRWLRPTEICEILQNYHKFHIASESPTRPASGSLFLFDRKVLRYFRKDG 75

Query: 276 HNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNFFRRCYWLLDKEAERIVLVHY 455
           HNW+KKKDGKT++EAHEKLK+G+ + +H YYA GE N NF RRCYW+L++    IV VHY
Sbjct: 76  HNWRKKKDGKTIREAHEKLKVGSIDVLHCYYAHGEANENFQRRCYWMLEQHLMHIVFVHY 135

Query: 456 RQ 461
            Q
Sbjct: 136 LQ 137



to top

>CMTA3_ARATH (Q8GSA7) Calmodulin-binding transcription activator 3|
           (Signal-responsive protein 1) (Ethylene-induced
           calmodulin-binding protein a) (EICBP.a)
           (Ethylene-induced calmodulin-binding protein 1) (EICBP1)
          Length = 1032

 Score =  152 bits (383), Expect = 5e-37
 Identities = 68/131 (51%), Positives = 93/131 (70%)
 Frame = +3

Query: 63  SEIHGFITYADLNFEKLKAEAASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIVLYD 242
           +E   F    +L+  ++ +EA  RW RP EI  +L N++RF++  +P   P SG++ ++D
Sbjct: 2   AEARRFSPVHELDVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMFD 61

Query: 243 RKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNFFRRCYWLLD 422
           RKV+R FRKDGHNW+KKKDGKTV+EAHE+LK G+ + +H YYA G+DN NF RR YWLL 
Sbjct: 62  RKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGQDNENFQRRSYWLLQ 121

Query: 423 KEAERIVLVHY 455
           +E   IV VHY
Sbjct: 122 EELSHIVFVHY 132



to top

>CMTA4_ARATH (Q9FYG2) Calmodulin-binding transcription activator 4|
           (Signal-responsive protein 5) (Ethylene-induced
           calmodulin-binding protein d) (EICBP.d)
           (Ethylene-induced calmodulin-binding protein 4) (EICBP4)
           (AtFIN21)
          Length = 1016

 Score =  136 bits (342), Expect = 3e-32
 Identities = 58/116 (50%), Positives = 83/116 (71%)
 Frame = +3

Query: 111 LKAEAASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGTIVLYDRKVVRNFRKDGHNWKK 290
           L  EA SRW +P E+  +L NHE   +      +P SG+++L++++V++ FRKDGH W++
Sbjct: 41  LYQEAHSRWLKPPEVLFILQNHESLTLTNTAPQRPTSGSLLLFNKRVLKFFRKDGHQWRR 100

Query: 291 KKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNFFRRCYWLLDKEAERIVLVHYR 458
           K+DG+ + EAHE+LK+GN E ++ YYA GE +P F RR YW+LD E E IVLVHYR
Sbjct: 101 KRDGRAIAEAHERLKVGNAEALNCYYAHGEQDPTFRRRIYWMLDPEYEHIVLVHYR 156



to top

>CMTA1_HUMAN (Q9Y6Y1) Calmodulin-binding transcription activator 1|
          Length = 1673

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 49/110 (44%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
 Frame = +3

Query: 132 RWFRPNEIYAVLANHERFK--VHAQPIDKPVSGTIVLYDRKVVRNFRKDGHNWKKKKDGK 305
           RW    EI A L   E+ +  +   P  +P +G+++LY+RK V+ +RKDG+ WKK+KDGK
Sbjct: 73  RWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVK-YRKDGYCWKKRKDGK 131

Query: 306 TVQEAHEKLKIGNEERVHVYYARGEDNPNFFRRCYWLLDKEAERIVLVHY 455
           T +E H KLK+   E ++  Y      P F RRCYWLL  +   IVLVHY
Sbjct: 132 TTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLL--QNPDIVLVHY 179



to top

>CMTA2_HUMAN (O94983) Calmodulin-binding transcription activator 2|
          Length = 1202

 Score = 89.0 bits (219), Expect = 6e-18
 Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
 Frame = +3

Query: 132 RWFRPNEIYAVLANHERFK--VHAQPIDKPVSGTIVLYDRKVVRNFRKDGHNWKKKKDGK 305
           RW    EI + L   E+    +   P  +P +G+I+LY+RK V+ +RKDG+ WKK+KDGK
Sbjct: 40  RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVK-YRKDGYLWKKRKDGK 98

Query: 306 TVQEAHEKLKIGNEERVHVYYARGEDNPNFFRRCYWLLDKEAERIVLVHY 455
           T +E H KLK+   E ++  Y      P F RRCYWLL  +   IVLVHY
Sbjct: 99  TTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLL--QNPDIVLVHY 146



to top

>CMTA2_MOUSE (Q80Y50) Calmodulin-binding transcription activator 2|
          Length = 1208

 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 50/115 (43%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
 Frame = +3

Query: 132 RWFRPNEIYAVLANHERFK--VHAQPIDKPVSGTIVLYDRKVVRNFRKDGHNWKKKKDGK 305
           RW    EI + L   E+    +   P  +P +G+I+LY+RK V+ +RKDG+ WKK+KDGK
Sbjct: 40  RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVK-YRKDGYLWKKRKDGK 98

Query: 306 TVQEAHEKLKIGNEERV-----HVYYARGEDNPNFFRRCYWLLDKEAERIVLVHY 455
           T +E H KLK+   E V     +  Y      P F RRCYWLL  +   IVLVHY
Sbjct: 99  TTREDHMKLKVQGMEPVSWQCLYGCYVHSSIVPTFHRRCYWLL--QNPDIVLVHY 151



to top

>IRK1_HUMAN (P48048) ATP-sensitive inward rectifier potassium channel 1|
           (Potassium channel, inwardly rectifying subfamily J
           member 1) (ATP-regulated potassium channel ROM-K)
           (Kir1.1)
          Length = 391

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 261 FRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNF 395
           +R D HN+ K  +   V+  H  + + NE+ V     RG DNPNF
Sbjct: 337 YRVDFHNFSKTVE---VETPHCAMCLYNEKDVRARMKRGYDNPNF 378



to top

>ALGG_PSEFL (P59828) Poly(beta-D-mannuronate) C5 epimerase precursor (EC|
           5.1.3.-)
          Length = 529

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +3

Query: 174 HERFKVHAQPIDKPVSGTIVLYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIGNE 347
           ++ F  + +  D  +SG ++  DR  V NF  D   ++   DG T+ E+ + L  GN+
Sbjct: 341 NDSFIFNNRSYDNKLSGLVL--DRNSVNNFVADNEFYRNHTDGITLYESGDNLLWGNK 396



to top

>HIP_MYTED (P83425) Heavy metal binding protein HIP|
          Length = 213

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -2

Query: 378 HLEHNRHE-PSLHYQSLIFHALLGQF--CHPSFSSNYGHPSESSG 253
           H EHN+HE  +LH +    H  +  F   H +FS+   HP E+ G
Sbjct: 55  HTEHNKHEIDALHLEIKQLHEEVEYFKSHHVAFSAELTHPIENLG 99



to top

>SCN7A_HUMAN (Q01118) Sodium channel protein type 7 alpha subunit (Sodium channel|
            protein type VII alpha subunit) (Putative voltage-gated
            sodium channel alpha subunit Nax) (Sodium channel
            protein, cardiac and skeletal muscle alpha-subunit)
          Length = 1682

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
 Frame = -3

Query: 389  WIILTSSIID-----MNPLFITNL*FFMRFLDSFAILLFLPIMAILPKVPDNF 246
            WI + +S ID     + P F  N+  +  F++     +FLP+  ++  + DNF
Sbjct: 1144 WITIMNSAIDSVAVNIQPHFEVNIYMYCYFINFIIFGVFLPLSMLITVIIDNF 1196



to top

>IRK1_MOUSE (O88335) ATP-sensitive inward rectifier potassium channel 1|
           (Potassium channel, inwardly rectifying subfamily J
           member 1) (ATP-regulated potassium channel ROM-K)
           (Kir1.1)
          Length = 372

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +3

Query: 261 FRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNF 395
           +R D HN+ K  +   V+  H  + + NE+       RG DNPNF
Sbjct: 318 YRVDFHNFGKTVE---VETPHCAMCLYNEKDARARMKRGYDNPNF 359



to top

>IRK1_RAT (P35560) ATP-sensitive inward rectifier potassium channel 1|
           (Potassium channel, inwardly rectifying subfamily J
           member 1) (ATP-regulated potassium channel ROM-K)
           (KAB-1) (Kir1.1)
          Length = 391

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +3

Query: 261 FRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNF 395
           +R D HN+ K  +   V+  H  + + NE+       RG DNPNF
Sbjct: 337 YRVDFHNFGKTVE---VETPHCAMCLYNEKDARARMKRGYDNPNF 378



to top

>CX045_HUMAN (Q9H5U8) Protein CXorf45|
          Length = 459

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
 Frame = -2

Query: 378 HLEHNRHEPSLHYQSLIFHALLGQFCHPSFSS-----NYGHPSESSGQLYDH 238
           H  H  H+P +HY     + +  +  HP   S      YG P  SS  +  H
Sbjct: 18  HSMHYGHDPPMHYSQTAGNVMSNEHFHPQHPSPRQGRGYGMPRNSSRFINRH 69



to top

>SAT3_ARATH (Q39218) Serine acetyltransferase 3, mitochondrial precursor (EC|
           2.3.1.30) (AtSAT-3) (SAT-m) (AtSERAT2;2)
          Length = 376

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
 Frame = +3

Query: 33  AGRERDPLLRSEIHGFITYADLNFEKLKAEAASRWFRPNEIYAVLANH---ERFKVHAQP 203
           A +ERDP   S +H F+ +      +    A   W +  +I A+L  +   E F V   P
Sbjct: 188 AVKERDPACISYVHCFLHFKGFLACQAHRIAHELWTQDRKILALLIQNRVSEAFAVDFHP 247

Query: 204 IDKPVSG-------TIVLYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIG 341
             K  +G        IV+ +  VV N     HN      GK   + H K+  G
Sbjct: 248 GAKIGTGILLDHATAIVIGETAVVGNNVSILHNVTLGGTGKQCGDRHPKIGDG 300



to top

>IMDH_SHIFL (P0ADG9) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 488

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
 Frame = +3

Query: 63  SEIHGFITYADLNFEKLKAEAASRWFRPNE-IYAVLANHERFKVHAQPIDKPVSGTIVLY 239
           +E+ G IT  D+ F     +  S +  P E +  V     R  V A+  +K V   +V+ 
Sbjct: 128 NELVGIITGRDVRFVTDLNQPVSVYMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVD 187

Query: 240 DRK------VVRNFRKDGH--NWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGED 383
           D         V++F+K     N  K + G+    A      GNEERV    A G D
Sbjct: 188 DEFHLIGMITVKDFQKAERKPNACKDEQGRLRVGAAVGAGAGNEERVDALVAAGVD 243



to top

>IMDH_ECOLI (P0ADG7) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 488

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
 Frame = +3

Query: 63  SEIHGFITYADLNFEKLKAEAASRWFRPNE-IYAVLANHERFKVHAQPIDKPVSGTIVLY 239
           +E+ G IT  D+ F     +  S +  P E +  V     R  V A+  +K V   +V+ 
Sbjct: 128 NELVGIITGRDVRFVTDLNQPVSVYMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVD 187

Query: 240 DRK------VVRNFRKDGH--NWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGED 383
           D         V++F+K     N  K + G+    A      GNEERV    A G D
Sbjct: 188 DEFHLIGMITVKDFQKAERKPNACKDEQGRLRVGAAVGAGAGNEERVDALVAAGVD 243



to top

>IMDH_ECO57 (P0ADG8) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 488

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
 Frame = +3

Query: 63  SEIHGFITYADLNFEKLKAEAASRWFRPNE-IYAVLANHERFKVHAQPIDKPVSGTIVLY 239
           +E+ G IT  D+ F     +  S +  P E +  V     R  V A+  +K V   +V+ 
Sbjct: 128 NELVGIITGRDVRFVTDLNQPVSVYMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVD 187

Query: 240 DRK------VVRNFRKDGH--NWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGED 383
           D         V++F+K     N  K + G+    A      GNEERV    A G D
Sbjct: 188 DEFHLIGMITVKDFQKAERKPNACKDEQGRLRVGAAVGAGAGNEERVDALVAAGVD 243



to top

>TRMU_MYCPE (Q8CXQ3) Probable tRNA|
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           (EC 2.1.1.61)
          Length = 370

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 255 RNFRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVY 365
           RNF+   HN+  KK GK +     K ++G  E +H Y
Sbjct: 213 RNFKNFLHNYIDKKPGKIIDIDTSK-EVGTHEGIHFY 248


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,212,740
Number of Sequences: 219361
Number of extensions: 1267973
Number of successful extensions: 3531
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3528
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top