ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl56g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478167.1| Oryza sativa (japonica cultivar-group), mRNA 420 e-114
2dbj|AK070976.1| Oryza sativa (japonica cultivar-group) cDNA clon... 420 e-114
3gb|AF499741.1| Oryza sativa CaM-binding transcription factor (CB... 404 e-109
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
5dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
6ref|NM_196150.1| Oryza sativa (japonica cultivar-group) putative... 66 1e-07
7gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar N... 66 1e-07
8gb|AC079935.3| Genomic sequence for Oryza sativa (japonica culti... 66 1e-07
9dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
10dbj|AK105116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
11dbj|AK101479.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
12gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
13gb|AC110576.12| Mus musculus chromosome 8, clone RP23-329K17, co... 48 0.026
14gb|AC016647.7| Homo sapiens chromosome 16 clone RP11-89G14, comp... 44 0.40
15ref|XM_388606.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 42 1.6
16emb|CR749176.14| Zebrafish DNA sequence from clone DKEY-43B13 in... 42 1.6
17emb|BX640548.14| Zebrafish DNA sequence from clone CH211-198E12 ... 42 1.6
18gb|BC052105.1| Danio rerio zgc:56402, mRNA (cDNA clone MGC:56402... 40 6.3
19gb|CP000114.1| Streptococcus agalactiae A909, complete genome 40 6.3
20gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome 40 6.3
21gb|AC125320.4| Mus musculus BAC clone RP23-351P13 from chromosom... 40 6.3
22ref|XM_646092.1| Entamoeba histolytica HM-1:IMSS conserved hypot... 40 6.3
23emb|AL844607.4| Mouse DNA sequence from clone RP24-280G18 on chr... 40 6.3
24gb|AC157932.8| Mus musculus chromosome 5, clone RP24-188B2, comp... 40 6.3
25gb|AC105288.3| Homo sapiens BAC clone RP11-554F9 from 4, complet... 40 6.3
26dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
27dbj|AB219939.1| Lycopersicon esculentum LeHSP110/ClpB mRNA for h... 40 6.3
28ref|NM_200324.1| Danio rerio zgc:56402 (zgc:56402), mRNA 40 6.3
29gb|AC140052.4| Mus musculus BAC clone RP23-346E11 from chromosom... 40 6.3
30dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
31emb|BX666064.10| Zebrafish DNA sequence from clone DKEY-6N3 in l... 40 6.3
32gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 6.3 
>ref|XM_478167.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3174

 Score =  420 bits (212), Expect = e-114
 Identities = 362/412 (87%)
 Strand = Plus / Plus

                                                                       
Query: 46  gggacccgctcctacgctccgagatccacggcttcatcacctacgcagacttgaacttcg 105
           ||||||||||| |  |||||||||||||||| ||| |||| ||| ||||||||||||  |
Sbjct: 70  gggacccgctcgtcggctccgagatccacggtttcctcacttacccagacttgaactatg 129

                                                                       
Query: 106 agaagctgaaagcagaggccgcgtcgcgctggttccggccgaatgagatctacgcggtcc 165
           ||||||||   || ||||| ||| |||| ||||||||||| ||||||||||||||| |  
Sbjct: 130 agaagctggtggcggaggcggcggcgcggtggttccggcctaatgagatctacgcgatat 189

                                                                       
Query: 166 tggcgaaccacgagaggttcaaggtccatgcacagcccattgacaagcccgtgagtggta 225
           |||||||||||| |||||||||| |||| ||||| ||  | ||||||||||||||||| |
Sbjct: 190 tggcgaaccacgcgaggttcaagatccacgcacaaccggtcgacaagcccgtgagtggaa 249

                                                                       
Query: 226 ctattgttctatatgatcgtaaagttgtccggaactttcggaaggatggccataattgga 285
           || |||||||||||||||||||||| ||| ||||||| || |||||||||||||||||||
Sbjct: 250 ctgttgttctatatgatcgtaaagtagtcaggaacttccgtaaggatggccataattgga 309

                                                                       
Query: 286 agaaaaagaaggatggcaaaactgtccaagaagcgcatgaaaaattaaagattggtaatg 345
           | ||||||||||||||||  || ||||||||||| ||||||||||||||||||||||| |
Sbjct: 310 aaaaaaagaaggatggcaggacggtccaagaagctcatgaaaaattaaagattggtaacg 369

                                                                       
Query: 346 aagagagggttcatgtctattatgctcgaggtgaggataatccaaatttctttagaaggt 405
           |||| ||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |
Sbjct: 370 aagaaagggttcatgtctattatgctcgaggtgaagatgatccaaatttctttcgaagat 429

                                                               
Query: 406 gctactggctacttgacaaagaggctgaacggatagttcttgtgcattatcg 457
           ||||||||||||||||||||||    || || ||||||||||||||||||||
Sbjct: 430 gctactggctacttgacaaagatttggagcgcatagttcttgtgcattatcg 481
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>dbj|AK070976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073E17, full
           insert sequence
          Length = 3174

 Score =  420 bits (212), Expect = e-114
 Identities = 362/412 (87%)
 Strand = Plus / Plus

                                                                       
Query: 46  gggacccgctcctacgctccgagatccacggcttcatcacctacgcagacttgaacttcg 105
           ||||||||||| |  |||||||||||||||| ||| |||| ||| ||||||||||||  |
Sbjct: 70  gggacccgctcgtcggctccgagatccacggtttcctcacttacccagacttgaactatg 129

                                                                       
Query: 106 agaagctgaaagcagaggccgcgtcgcgctggttccggccgaatgagatctacgcggtcc 165
           ||||||||   || ||||| ||| |||| ||||||||||| ||||||||||||||| |  
Sbjct: 130 agaagctggtggcggaggcggcggcgcggtggttccggcctaatgagatctacgcgatat 189

                                                                       
Query: 166 tggcgaaccacgagaggttcaaggtccatgcacagcccattgacaagcccgtgagtggta 225
           |||||||||||| |||||||||| |||| ||||| ||  | ||||||||||||||||| |
Sbjct: 190 tggcgaaccacgcgaggttcaagatccacgcacaaccggtcgacaagcccgtgagtggaa 249

                                                                       
Query: 226 ctattgttctatatgatcgtaaagttgtccggaactttcggaaggatggccataattgga 285
           || |||||||||||||||||||||| ||| ||||||| || |||||||||||||||||||
Sbjct: 250 ctgttgttctatatgatcgtaaagtagtcaggaacttccgtaaggatggccataattgga 309

                                                                       
Query: 286 agaaaaagaaggatggcaaaactgtccaagaagcgcatgaaaaattaaagattggtaatg 345
           | ||||||||||||||||  || ||||||||||| ||||||||||||||||||||||| |
Sbjct: 310 aaaaaaagaaggatggcaggacggtccaagaagctcatgaaaaattaaagattggtaacg 369

                                                                       
Query: 346 aagagagggttcatgtctattatgctcgaggtgaggataatccaaatttctttagaaggt 405
           |||| ||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |
Sbjct: 370 aagaaagggttcatgtctattatgctcgaggtgaagatgatccaaatttctttcgaagat 429

                                                               
Query: 406 gctactggctacttgacaaagaggctgaacggatagttcttgtgcattatcg 457
           ||||||||||||||||||||||    || || ||||||||||||||||||||
Sbjct: 430 gctactggctacttgacaaagatttggagcgcatagttcttgtgcattatcg 481
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>gb|AF499741.1| Oryza sativa CaM-binding transcription factor (CBT) mRNA, complete
           cds
          Length = 3134

 Score =  404 bits (204), Expect = e-109
 Identities = 360/412 (87%)
 Strand = Plus / Plus

                                                                       
Query: 46  gggacccgctcctacgctccgagatccacggcttcatcacctacgcagacttgaacttcg 105
           ||||||||||| |  |||||||||||||||| ||| |||| ||| ||||||||||||  |
Sbjct: 46  gggacccgctcgtcggctccgagatccacggtttcctcacttacccagacttgaactatg 105

                                                                       
Query: 106 agaagctgaaagcagaggccgcgtcgcgctggttccggccgaatgagatctacgcggtcc 165
           | ||||||   || ||||| ||| |||| ||||||||||| ||||||||||||||| |  
Sbjct: 106 ataagctggtggcggaggcggcggcgcggtggttccggcctaatgagatctacgcgatat 165

                                                                       
Query: 166 tggcgaaccacgagaggttcaaggtccatgcacagcccattgacaagcccgtgagtggta 225
           |||||||||||| |||||||||| |||| ||||| ||  | ||||||||||||||||| |
Sbjct: 166 tggcgaaccacgcgaggttcaagatccacgcacaaccggtcgacaagcccgtgagtggaa 225

                                                                       
Query: 226 ctattgttctatatgatcgtaaagttgtccggaactttcggaaggatggccataattgga 285
           || |||||||||||||||||||||| ||| ||||||| || |||||||||||||||||||
Sbjct: 226 ctgttgttctatatgatcgtaaagtagtcaggaacttccgtaaggatggccataattgga 285

                                                                       
Query: 286 agaaaaagaaggatggcaaaactgtccaagaagcgcatgaaaaattaaagattggtaatg 345
           | ||||||||||||||||  || ||||||||||| ||||||||||||||||||||||| |
Sbjct: 286 aaaaaaagaaggatggcaggacggtccaagaagctcatgaaaaattaaagattggtaacg 345

                                                                       
Query: 346 aagagagggttcatgtctattatgctcgaggtgaggataatccaaatttctttagaaggt 405
           |||| |||||||||||||||||||||||||||||  || |||||||||||||| |||| |
Sbjct: 346 aagaaagggttcatgtctattatgctcgaggtgaaaatgatccaaatttctttcgaagat 405

                                                               
Query: 406 gctactggctacttgacaaagaggctgaacggatagttcttgtgcattatcg 457
           ||||||||||||||||||||||    || || ||||||||||||||||||||
Sbjct: 406 gctactggctacttgacaaagatttggagcgcatagttcttgtgcattatcg 457
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  143 bits (72), Expect = 6e-31
 Identities = 105/116 (90%)
 Strand = Plus / Minus

                                                                            
Query: 220      gtggtactattgttctatatgatcgtaaagttgtccggaactttcggaaggatggccata 279
                |||| ||| |||||||||||||||||||||| ||| ||||||| || |||||||||||||
Sbjct: 18158591 gtggaactgttgttctatatgatcgtaaagtagtcaggaacttccgtaaggatggccata 18158532

                                                                        
Query: 280      attggaagaaaaagaaggatggcaaaactgtccaagaagcgcatgaaaaattaaag 335
                ||||||| ||||||||||||||||  || ||||||||||| |||||||||||||||
Sbjct: 18158531 attggaaaaaaaagaaggatggcaggacggtccaagaagctcatgaaaaattaaag 18158476



 Score =  133 bits (67), Expect = 6e-28
 Identities = 85/91 (93%)
 Strand = Plus / Minus

                                                                            
Query: 334      agattggtaatgaagagagggttcatgtctattatgctcgaggtgaggataatccaaatt 393
                |||||||||| ||||| ||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 18158391 agattggtaacgaagaaagggttcatgtctattatgctcgaggtgaagatgatccaaatt 18158332

                                               
Query: 394      tctttagaaggtgctactggctacttgacaa 424
                ||||| |||| ||||||||||||||||||||
Sbjct: 18158331 tctttcgaagatgctactggctacttgacaa 18158301



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 110/130 (84%)
 Strand = Plus / Minus

                                                                            
Query: 92       agacttgaacttcgagaagctgaaagcagaggccgcgtcgcgctggttccggccgaatga 151
                |||||||||||  |||||||||   || ||||| ||| |||| ||||||||||| |||||
Sbjct: 18163779 agacttgaactatgagaagctggtggcggaggcggcggcgcggtggttccggcctaatga 18163720

                                                                            
Query: 152      gatctacgcggtcctggcgaaccacgagaggttcaaggtccatgcacagcccattgacaa 211
                |||||||||| |  |||||||||||| |||||||||| |||| ||||| ||  | |||||
Sbjct: 18163719 gatctacgcgatattggcgaaccacgcgaggttcaagatccacgcacaaccggtcgacaa 18163660

                          
Query: 212      gcccgtgagt 221
                ||||||||||
Sbjct: 18163659 gcccgtgagt 18163650



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 46       gggacccgctcctacgctccgagatccacggcttcatcac 85
                ||||||||||| |  |||||||||||||||| ||| ||||
Sbjct: 18164461 gggacccgctcgtcggctccgagatccacggtttcctcac 18164422



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 438      atagttcttgtgcattatcg 457
                ||||||||||||||||||||
Sbjct: 18157530 atagttcttgtgcattatcg 18157511
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>dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0477A12
          Length = 138141

 Score =  143 bits (72), Expect = 6e-31
 Identities = 105/116 (90%)
 Strand = Plus / Minus

                                                                         
Query: 220   gtggtactattgttctatatgatcgtaaagttgtccggaactttcggaaggatggccata 279
             |||| ||| |||||||||||||||||||||| ||| ||||||| || |||||||||||||
Sbjct: 93897 gtggaactgttgttctatatgatcgtaaagtagtcaggaacttccgtaaggatggccata 93838

                                                                     
Query: 280   attggaagaaaaagaaggatggcaaaactgtccaagaagcgcatgaaaaattaaag 335
             ||||||| ||||||||||||||||  || ||||||||||| |||||||||||||||
Sbjct: 93837 attggaaaaaaaagaaggatggcaggacggtccaagaagctcatgaaaaattaaag 93782



 Score =  133 bits (67), Expect = 6e-28
 Identities = 85/91 (93%)
 Strand = Plus / Minus

                                                                         
Query: 334   agattggtaatgaagagagggttcatgtctattatgctcgaggtgaggataatccaaatt 393
             |||||||||| ||||| ||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 93697 agattggtaacgaagaaagggttcatgtctattatgctcgaggtgaagatgatccaaatt 93638

                                            
Query: 394   tctttagaaggtgctactggctacttgacaa 424
             ||||| |||| ||||||||||||||||||||
Sbjct: 93637 tctttcgaagatgctactggctacttgacaa 93607



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 110/130 (84%)
 Strand = Plus / Minus

                                                                         
Query: 92    agacttgaacttcgagaagctgaaagcagaggccgcgtcgcgctggttccggccgaatga 151
             |||||||||||  |||||||||   || ||||| ||| |||| ||||||||||| |||||
Sbjct: 99085 agacttgaactatgagaagctggtggcggaggcggcggcgcggtggttccggcctaatga 99026

                                                                         
Query: 152   gatctacgcggtcctggcgaaccacgagaggttcaaggtccatgcacagcccattgacaa 211
             |||||||||| |  |||||||||||| |||||||||| |||| ||||| ||  | |||||
Sbjct: 99025 gatctacgcgatattggcgaaccacgcgaggttcaagatccacgcacaaccggtcgacaa 98966

                       
Query: 212   gcccgtgagt 221
             ||||||||||
Sbjct: 98965 gcccgtgagt 98956



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 46    gggacccgctcctacgctccgagatccacggcttcatcac 85
             ||||||||||| |  |||||||||||||||| ||| ||||
Sbjct: 99767 gggacccgctcgtcggctccgagatccacggtttcctcac 99728



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 438   atagttcttgtgcattatcg 457
             ||||||||||||||||||||
Sbjct: 92836 atagttcttgtgcattatcg 92817
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>ref|NM_196150.1| Oryza sativa (japonica cultivar-group) putative calmodulin binding
           protein similar to ER66 (OSJNBa0091J06.19), mRNA
          Length = 3117

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 259 actttcggaaggatggccataattggaagaaaaagaaggatggcaaaactgtccaagaag 318
           ||||| ||||||| ||||||||||||| ||| || |||||||| || |||||| ||||||
Sbjct: 209 actttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaag 268

                    
Query: 319 cgcatgaaa 327
           | |||||||
Sbjct: 269 cacatgaaa 277
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>gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone
              OSJNBa0091J06 from chromosome 10, complete sequence
          Length = 141911

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                          
Query: 259    actttcggaaggatggccataattggaagaaaaagaaggatggcaaaactgtccaagaag 318
              ||||| ||||||| ||||||||||||| ||| || |||||||| || |||||| ||||||
Sbjct: 115048 actttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaag 115107

                       
Query: 319    cgcatgaaa 327
              | |||||||
Sbjct: 115108 cacatgaaa 115116
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>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
            Nipponbare clone OSJNBa0095C06, from Chromosome 10,
            complete sequence
          Length = 156159

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                        
Query: 259  actttcggaaggatggccataattggaagaaaaagaaggatggcaaaactgtccaagaag 318
            ||||| ||||||| ||||||||||||| ||| || |||||||| || |||||| ||||||
Sbjct: 5970 actttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaag 6029

                     
Query: 319  cgcatgaaa 327
            | |||||||
Sbjct: 6030 cacatgaaa 6038
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                            
Query: 259      actttcggaaggatggccataattggaagaaaaagaaggatggcaaaactgtccaagaag 318
                ||||| ||||||| ||||||||||||| ||| || |||||||| || |||||| ||||||
Sbjct: 11421977 actttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaag 11422036

                         
Query: 319      cgcatgaaa 327
                | |||||||
Sbjct: 11422037 cacatgaaa 11422045
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>dbj|AK105116.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H10, full
           insert sequence
          Length = 3510

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 259 actttcggaaggatggccataattggaagaaaaagaaggatggcaaaactgtccaagaag 318
           ||||| ||||||| ||||||||||||| ||| || |||||||| || |||||| ||||||
Sbjct: 393 actttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaag 452

                    
Query: 319 cgcatgaaa 327
           | |||||||
Sbjct: 453 cacatgaaa 461
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>dbj|AK101479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041A20, full
           insert sequence
          Length = 3514

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 259 actttcggaaggatggccataattggaagaaaaagaaggatggcaaaactgtccaagaag 318
           ||||| ||||||| ||||||||||||| ||| || |||||||| || |||||| ||||||
Sbjct: 398 actttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaag 457

                    
Query: 319 cgcatgaaa 327
           | |||||||
Sbjct: 458 cacatgaaa 466
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                            
Query: 259      actttcggaaggatggccataattggaagaaaaagaaggatggcaaaactgtccaagaag 318
                ||||| ||||||| ||||||||||||| ||| || |||||||| || |||||| ||||||
Sbjct: 11428417 actttaggaaggacggccataattggaggaagaaaaaggatggaaagactgtcaaagaag 11428476

                         
Query: 319      cgcatgaaa 327
                | |||||||
Sbjct: 11428477 cacatgaaa 11428485
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>gb|AC110576.12| Mus musculus chromosome 8, clone RP23-329K17, complete sequence
          Length = 224141

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 180    aggttcaaggtccatgcacagccc 203
              ||||||||||||||||||||||||
Sbjct: 142694 aggttcaaggtccatgcacagccc 142671
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>gb|AC016647.7| Homo sapiens chromosome 16 clone RP11-89G14, complete sequence
          Length = 160358

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 323    tgaaaaattaaagattggtaatgaag 348
              |||||||||||||||||| |||||||
Sbjct: 130823 tgaaaaattaaagattggaaatgaag 130798
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>ref|XM_388606.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08430.1)
           partial mRNA
          Length = 2286

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 102 ttcgagaagctgaaagcagaggccg 126
           |||||||||| ||||||||||||||
Sbjct: 76  ttcgagaagcagaaagcagaggccg 100
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>emb|CR749176.14| Zebrafish DNA sequence from clone DKEY-43B13 in linkage group 19,
              complete sequence
          Length = 237649

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 319    cgcatgaaaaattaaagattg 339
              |||||||||||||||||||||
Sbjct: 179307 cgcatgaaaaattaaagattg 179287
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>emb|BX640548.14| Zebrafish DNA sequence from clone CH211-198E12 in linkage group 11,
              complete sequence
          Length = 231587

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 319    cgcatgaaaaattaaagattg 339
              |||||||||||||||||||||
Sbjct: 124373 cgcatgaaaaattaaagattg 124393
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>gb|BC052105.1| Danio rerio zgc:56402, mRNA (cDNA clone MGC:56402 IMAGE:5605173),
           complete cds
          Length = 1819

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 97  tgaacttcgagaagctgaaa 116
           ||||||||||||||||||||
Sbjct: 694 tgaacttcgagaagctgaaa 713
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>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 341     taatgaagagagggttcatg 360
               ||||||||||||||||||||
Sbjct: 1464670 taatgaagagagggttcatg 1464651
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>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome
          Length = 897405

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 385    atccaaatttctttagaaggtgct 408
              ||||||||||||||||||| ||||
Sbjct: 480099 atccaaatttctttagaagttgct 480076
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>gb|AC125320.4| Mus musculus BAC clone RP23-351P13 from chromosome 15, complete sequence
          Length = 229480

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    cataattggaagaaaaagaa 295
              ||||||||||||||||||||
Sbjct: 103499 cataattggaagaaaaagaa 103518
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>ref|XM_646092.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
           (178.t00008) partial mRNA
          Length = 1419

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 329 attaaagattggtaatgaag 348
           ||||||||||||||||||||
Sbjct: 837 attaaagattggtaatgaag 818
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>emb|AL844607.4| Mouse DNA sequence from clone RP24-280G18 on chromosome 4, complete
             sequence
          Length = 160298

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 282   tggaagaaaaagaaggatggcaaa 305
             |||||||| |||||||||||||||
Sbjct: 85086 tggaagaacaagaaggatggcaaa 85109
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>gb|AC157932.8| Mus musculus chromosome 5, clone RP24-188B2, complete sequence
          Length = 168685

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   tacttgacaaagaggctgaa 434
             ||||||||||||||||||||
Sbjct: 79074 tacttgacaaagaggctgaa 79093
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>gb|AC105288.3| Homo sapiens BAC clone RP11-554F9 from 4, complete sequence
          Length = 142915

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aagcagcagccgcggcggct 20
              ||||||||||||||||||||
Sbjct: 123682 aagcagcagccgcggcggct 123663
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 288      aaaaagaaggatggcaaaac 307
                ||||||||||||||||||||
Sbjct: 19935504 aaaaagaaggatggcaaaac 19935523
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>dbj|AB219939.1| Lycopersicon esculentum LeHSP110/ClpB mRNA for heat shock protein,
           complete cds
          Length = 3144

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 279 aattggaagaaaaagaaggatggcaaaactgt 310
           ||||||||||| ||||||||  ||||||||||
Sbjct: 85  aattggaagaagaagaaggaacgcaaaactgt 54
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>ref|NM_200324.1| Danio rerio zgc:56402 (zgc:56402), mRNA
          Length = 1819

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 97  tgaacttcgagaagctgaaa 116
           ||||||||||||||||||||
Sbjct: 694 tgaacttcgagaagctgaaa 713
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>gb|AC140052.4| Mus musculus BAC clone RP23-346E11 from chromosome 15, complete
            sequence
          Length = 210091

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  cataattggaagaaaaagaa 295
            ||||||||||||||||||||
Sbjct: 6088 cataattggaagaaaaagaa 6069
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>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1018E06
          Length = 178499

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   aaaaagaaggatggcaaaac 307
             ||||||||||||||||||||
Sbjct: 73844 aaaaagaaggatggcaaaac 73863
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>emb|BX666064.10| Zebrafish DNA sequence from clone DKEY-6N3 in linkage group 22, complete
              sequence
          Length = 156234

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     tgaacttcgagaagctgaaa 116
              ||||||||||||||||||||
Sbjct: 143199 tgaacttcgagaagctgaaa 143180
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 313     aagaagcgcatgaaaaatta 332
               ||||||||||||||||||||
Sbjct: 3248085 aagaagcgcatgaaaaatta 3248104


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,528,471
Number of Sequences: 3902068
Number of extensions: 4528471
Number of successful extensions: 124666
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124420
Number of HSP's gapped (non-prelim): 243
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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