ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl56g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC150698.3| Oryza sativa (japonica cultivar-group) chromosome... 60 7e-06
2gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome... 60 7e-06
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 60 7e-06
5gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial c... 58 3e-05
6gb|AY270157.1| Triticum aestivum resistance protein LR10 gene, c... 56 1e-04
7gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156... 56 1e-04
8gb|AY270158.1| Triticum aestivum resistance protein CAN_RGA1 gen... 50 0.007
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
10emb|AL662965.3|OSJN00167 Oryza sativa genomic DNA, chromosome 4,... 48 0.026
11gb|AC171904.2| Capitella capitata clone JGIBGZA-5B21, complete s... 46 0.10
12gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.40
13ref|XM_781978.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.40
14gb|AC007391.3| Homo sapiens BAC clone RP11-429J10 from 2, comple... 44 0.40
15ref|NM_017168.1| Rattus norvegicus phospholipase C, gamma 2 (Plc... 44 0.40
16gb|J05155.1|RATPLPIV Rat phospholipase C type IV mRNA, complete cds 44 0.40
17gb|AC163210.4| Mus musculus chromosome 7, clone RP24-362L9, comp... 42 1.6
18ref|NM_001030644.1| Gallus gallus chloride channel 7 (CLCN7), mRNA 42 1.6
19gb|AC161800.8| Mus musculus chromosome 7, clone RP23-340E19, com... 42 1.6
20emb|CT010454.8| Mouse DNA sequence from clone RP23-348C22 on chr... 42 1.6
21gb|AC110263.9| Mus musculus chromosome 3, clone RP23-296I12, com... 42 1.6
22emb|AJ719874.1| Gallus gallus mRNA for hypothetical protein, clo... 42 1.6
23ref|NM_031568.1| Rattus norvegicus chloride channel 7 (Clcn7), mRNA 42 1.6
24gb|AE006470.1| Chlorobium tepidum TLS, complete genome 42 1.6
25gb|DQ020494.1| Oryctolagus cuniculus chloride channel 7 (CLCN7) ... 42 1.6
26gb|AC154613.3| Mus musculus BAC clone RP23-338M12 from chromosom... 42 1.6
27gb|AF287482.1|AF287482 Chlorobium tepidum Orf79 gene, partial cd... 42 1.6
28emb|Z67744.1|RNCLC7MR R.norvegicus mRNA for CLC-7 chloride chann... 42 1.6
29gb|AC115740.8| Mus musculus chromosome 3, clone RP23-476G18, com... 42 1.6
30gb|AY700832.1| Scomberomorus commerson microsatellite SM25 sequence 40 6.3
31ref|NM_100524.3| Arabidopsis thaliana unknown protein AT1G06440 ... 40 6.3
32gb|BT015739.1| Arabidopsis thaliana At1g06440 mRNA, complete cds 40 6.3
33gb|AC137002.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
34ref|XM_616796.2| PREDICTED: Bos taurus similar to CG18769-PB, is... 40 6.3
35gb|AC099863.14| Mus musculus chromosome 3, clone RP23-6F2, compl... 40 6.3
36gb|AC116658.4| Mus musculus BAC clone RP23-293I4 from 17, comple... 40 6.3
37emb|CR339058.11| Zebrafish DNA sequence from clone CH211-135H16 ... 40 6.3
38emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on ch... 40 6.3
39gb|AC162794.4| Mus musculus chromosome 3, clone RP24-120B22, com... 40 6.3
40emb|BX548074.9| Zebrafish DNA sequence from clone CH211-11F6 in ... 40 6.3
41gb|AC134845.5| Mus musculus BAC clone RP24-424K5 from chromosome... 40 6.3
42dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
43emb|BX814125.1|CNS0ADGD Arabidopsis thaliana Full-length cDNA Co... 40 6.3
44gb|AC153912.8| Mus musculus 10 BAC RP23-331E5 (Roswell Park Canc... 40 6.3
45gb|AC157599.3| Mus musculus BAC clone RP23-138L13 from chromosom... 40 6.3
46gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana... 40 6.3
47gb|AY074917.1| Chlamydomonas reinhardtii ferroxidase-like protei... 40 6.3
48gb|BT021137.1| Arabidopsis thaliana At1g06440 gene, complete cds 40 6.3
49gb|AF450137.1| Chlamydomonas reinhardtii multicopper ferroxidase... 40 6.3 
>gb|AC150698.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0072P10, complete sequence
          Length = 147540

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 257   gggagatgtcctacaagatcgaggacaacatcgacaagttcatggt 302
             ||||| |||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 22741 gggagctgtcctacaacatcgaggacagcattgacaagttcatggt 22786
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>gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041I05, complete sequence
          Length = 148785

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 257   gggagatgtcctacaagatcgaggacaacatcgacaagttcatggt 302
             ||||| |||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 72656 gggagctgtcctacaacatcgaggacagcattgacaagttcatggt 72701
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 257      gggagatgtcctacaagatcgaggacaacatcgacaagttcatggt 302
                ||||| |||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 19667161 gggagctgtcctacaacatcgaggacagcattgacaagttcatggt 19667206



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 257      gggagatgtcctacaagatcgaggacaacatcga 290
                ||||| |||||||||| || ||||||||||||||
Sbjct: 21528541 gggagttgtcctacaacattgaggacaacatcga 21528574
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 257      gggagatgtcctacaagatcgaggacaacatcgacaagttcatggt 302
                ||||| |||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 19953019 gggagctgtcctacaacatcgaggacagcattgacaagttcatggt 19953064



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 257      gggagatgtcctacaagatcgaggacaacatcga 290
                ||||| |||||||||| || ||||||||||||||
Sbjct: 21838740 gggagttgtcctacaacattgaggacaacatcga 21838773
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>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome
              condensation factor (CCF), putative resistance protein
              (RGA-2), putative resistance protein (RGA2) and putative
              nodulin-like-like protein (NLL) gene, complete cds; and
              retrotransposons Josephine, Angela-2, Angela-4, Heidi,
              Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5,
              Barbara, Isabelle, Erika-2, and Claudia
          Length = 211009

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                   
Query: 54     ggtgagcgcatccacaggggcaatgggttccctcctg 90
              ||||||||||||||| || ||||||||||||||||||
Sbjct: 162836 ggtgagcgcatccacgggagcaatgggttccctcctg 162872
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>gb|AY270157.1| Triticum aestivum resistance protein LR10 gene, complete cds
          Length = 3938

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                  
Query: 51 tctggtgagcgcatccacaggggcaatgggttccctcctg 90
          ||||||||||||||| || || ||||||||||||||||||
Sbjct: 12 tctggtgagcgcatctacgggagcaatgggttccctcctg 51
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>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence
          Length = 187012

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                      
Query: 51     tctggtgagcgcatccacaggggcaatgggttccctcctg 90
              ||||||||||||||| || || ||||||||||||||||||
Sbjct: 176489 tctggtgagcgcatctacgggagcaatgggttccctcctg 176528
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>gb|AY270158.1| Triticum aestivum resistance protein CAN_RGA1 gene, partial cds
          Length = 3885

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                               
Query: 54 ggtgagcgcatccacaggggcaatgggttccctcctg 90
          ||||||||||||||| || ||| ||||||||||||||
Sbjct: 15 ggtgagcgcatccacgggagcagtgggttccctcctg 51
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 274     atcgaggacaacatcgacaagttcatggtcct 305
               ||||||||| |||||||||||| |||||||||
Sbjct: 6407060 atcgaggactacatcgacaagtccatggtcct 6407091
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>emb|AL662965.3|OSJN00167 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0040D17,
             complete sequence
          Length = 147548

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 274   atcgaggacaacatcgacaagttcatggtcct 305
             ||||||||| |||||||||||| |||||||||
Sbjct: 69209 atcgaggactacatcgacaagtccatggtcct 69240
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>gb|AC171904.2| Capitella capitata clone JGIBGZA-5B21, complete sequence
          Length = 38104

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 350  agctcatggacaaatgcaagaac 372
            |||||||||||||||||||||||
Sbjct: 4542 agctcatggacaaatgcaagaac 4520
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>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             B1356F10, complete sequence
          Length = 170681

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 257   gggagatgtcctacaagatcgaggacaacatcga 290
             ||||| |||||||||| || ||||||||||||||
Sbjct: 52060 gggagttgtcctacaacattgaggacaacatcga 52093
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>ref|XM_781978.1| PREDICTED: Strongylocentrotus purpuratus similar to DNA topoisomerase
            II, alpha isozyme (LOC582001), mRNA
          Length = 3024

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 415  gtcaaagacatcaagaaagaaatcaa 440
            |||||||| |||||||||||||||||
Sbjct: 1621 gtcaaagaaatcaagaaagaaatcaa 1646
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>gb|AC007391.3| Homo sapiens BAC clone RP11-429J10 from 2, complete sequence
          Length = 183991

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 424    atcaagaaagaaatcaaggatg 445
              ||||||||||||||||||||||
Sbjct: 141557 atcaagaaagaaatcaaggatg 141536
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>ref|NM_017168.1| Rattus norvegicus phospholipase C, gamma 2 (Plcg2), mRNA
          Length = 4321

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 150 catcaagttcctcaaggacgagctgg 175
           ||||||||||||||||||| ||||||
Sbjct: 737 catcaagttcctcaaggacaagctgg 762
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>gb|J05155.1|RATPLPIV Rat phospholipase C type IV mRNA, complete cds
          Length = 4321

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 150 catcaagttcctcaaggacgagctgg 175
           ||||||||||||||||||| ||||||
Sbjct: 737 catcaagttcctcaaggacaagctgg 762
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>gb|AC163210.4| Mus musculus chromosome 7, clone RP24-362L9, complete sequence
          Length = 161672

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 425   tcaagaaagaaatcaaggatgtcag 449
             |||||||||||||||| ||||||||
Sbjct: 12465 tcaagaaagaaatcaaagatgtcag 12441
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>ref|NM_001030644.1| Gallus gallus chloride channel 7 (CLCN7), mRNA
          Length = 3663

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 278 aggacaacatcgacaagttca 298
           |||||||||||||||||||||
Sbjct: 524 aggacaacatcgacaagttca 544
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>gb|AC161800.8| Mus musculus chromosome 7, clone RP23-340E19, complete sequence
          Length = 201173

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 425    tcaagaaagaaatcaaggatgtcag 449
              |||||||||||||||| ||||||||
Sbjct: 152158 tcaagaaagaaatcaaagatgtcag 152134
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>emb|CT010454.8| Mouse DNA sequence from clone RP23-348C22 on chromosome 13, complete
              sequence
          Length = 221281

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 425    tcaagaaagaaatcaaggatgtcag 449
              |||||||||||||||| ||||||||
Sbjct: 214355 tcaagaaagaaatcaaagatgtcag 214379
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>gb|AC110263.9| Mus musculus chromosome 3, clone RP23-296I12, complete sequence
          Length = 201908

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 425    tcaagaaagaaatcaaggatgtcag 449
              |||||||||||||||| ||||||||
Sbjct: 177836 tcaagaaagaaatcaaagatgtcag 177860
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>emb|AJ719874.1| Gallus gallus mRNA for hypothetical protein, clone 7i18
          Length = 3663

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 278 aggacaacatcgacaagttca 298
           |||||||||||||||||||||
Sbjct: 524 aggacaacatcgacaagttca 544
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>ref|NM_031568.1| Rattus norvegicus chloride channel 7 (Clcn7), mRNA
          Length = 2750

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 278 aggacaacatcgacaagttca 298
           |||||||||||||||||||||
Sbjct: 541 aggacaacatcgacaagttca 561
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>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 153     caagttcctcaaggacgagct 173
               |||||||||||||||||||||
Sbjct: 2038906 caagttcctcaaggacgagct 2038886
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>gb|DQ020494.1| Oryctolagus cuniculus chloride channel 7 (CLCN7) mRNA, complete cds
          Length = 3428

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 278 aggacaacatcgacaagttca 298
           |||||||||||||||||||||
Sbjct: 616 aggacaacatcgacaagttca 636
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>gb|AC154613.3| Mus musculus BAC clone RP23-338M12 from chromosome 13, complete sequence
          Length = 200093

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 425    tcaagaaagaaatcaaggatgtcag 449
              |||||||||||||||| ||||||||
Sbjct: 160309 tcaagaaagaaatcaaagatgtcag 160285
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>gb|AF287482.1|AF287482 Chlorobium tepidum Orf79 gene, partial cds; light-independent
            protochlorophyllide reductase N subunit (bchN),
            light-independent protochlorophyllide reductase B subunit
            (bchB), and light-independent protochlorophyllide
            reductase L subunit (bchL) genes, complete cds; and
            Orf122 gene, partial cds
          Length = 5217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 153  caagttcctcaaggacgagct 173
            |||||||||||||||||||||
Sbjct: 2567 caagttcctcaaggacgagct 2587
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>emb|Z67744.1|RNCLC7MR R.norvegicus mRNA for CLC-7 chloride channel protein
          Length = 2750

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 278 aggacaacatcgacaagttca 298
           |||||||||||||||||||||
Sbjct: 541 aggacaacatcgacaagttca 561
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>gb|AC115740.8| Mus musculus chromosome 3, clone RP23-476G18, complete sequence
          Length = 226125

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 425    tcaagaaagaaatcaaggatgtcag 449
              |||||||||||||||| ||||||||
Sbjct: 184979 tcaagaaagaaatcaaagatgtcag 184955
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>gb|AY700832.1| Scomberomorus commerson microsatellite SM25 sequence
          Length = 304

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 428 agaaagaaatcaaggatgtc 447
           ||||||||||||||||||||
Sbjct: 75  agaaagaaatcaaggatgtc 56
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>ref|NM_100524.3| Arabidopsis thaliana unknown protein AT1G06440 mRNA, complete cds
          Length = 1672

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 349 aagctcatggacaaatgcaagaac 372
           |||||||||||||||| |||||||
Sbjct: 270 aagctcatggacaaatacaagaac 293
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>gb|BT015739.1| Arabidopsis thaliana At1g06440 mRNA, complete cds
          Length = 1510

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 349 aagctcatggacaaatgcaagaac 372
           |||||||||||||||| |||||||
Sbjct: 206 aagctcatggacaaatacaagaac 229
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>gb|AC137002.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBb0061M13, complete sequence
          Length = 174910

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 420    agacatcaagaaagaaatcaagga 443
              |||||||||| |||||||||||||
Sbjct: 123201 agacatcaaggaagaaatcaagga 123178
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>ref|XM_616796.2| PREDICTED: Bos taurus similar to CG18769-PB, isoform B (LOC536656),
            mRNA
          Length = 2838

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 92   ggaagctgggagccatgttg 111
            ||||||||||||||||||||
Sbjct: 1015 ggaagctgggagccatgttg 1034
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>gb|AC099863.14| Mus musculus chromosome 3, clone RP23-6F2, complete sequence
          Length = 245784

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 418   aaagacatcaagaaagaaatcaag 441
             ||||| ||||||||||||||||||
Sbjct: 60288 aaagaaatcaagaaagaaatcaag 60311
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>gb|AC116658.4| Mus musculus BAC clone RP23-293I4 from 17, complete sequence
          Length = 199182

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 425   tcaagaaagaaatcaaggatgtca 448
             |||||||||||||||| |||||||
Sbjct: 60525 tcaagaaagaaatcaaagatgtca 60502
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>emb|CR339058.11| Zebrafish DNA sequence from clone CH211-135H16 in linkage group 23,
             complete sequence
          Length = 110857

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 355   atggacaaatgcaagaactt 374
             ||||||||||||||||||||
Sbjct: 85622 atggacaaatgcaagaactt 85603
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>emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on chromosome 22q11.21-11.23,
             complete sequence
          Length = 190837

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   caagcttctcaagaatgtcc 142
             ||||||||||||||||||||
Sbjct: 27725 caagcttctcaagaatgtcc 27706
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>gb|AC162794.4| Mus musculus chromosome 3, clone RP24-120B22, complete sequence
          Length = 139773

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 418   aaagacatcaagaaagaaatcaag 441
             ||||| ||||||||||||||||||
Sbjct: 18083 aaagaaatcaagaaagaaatcaag 18060
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>emb|BX548074.9| Zebrafish DNA sequence from clone CH211-11F6 in linkage group 23,
              complete sequence
          Length = 167014

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    atggacaaatgcaagaactt 374
              ||||||||||||||||||||
Sbjct: 149493 atggacaaatgcaagaactt 149474
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>gb|AC134845.5| Mus musculus BAC clone RP24-424K5 from chromosome 1, complete sequence
          Length = 194449

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 424    atcaagaaagaaatcaagga 443
              ||||||||||||||||||||
Sbjct: 117725 atcaagaaagaaatcaagga 117744
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 420      agacatcaagaaagaaatcaagga 443
                |||||||||| |||||||||||||
Sbjct: 10953997 agacatcaaggaagaaatcaagga 10953974
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>emb|BX814125.1|CNS0ADGD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB58ZD11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1673

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 349 aagctcatggacaaatgcaagaac 372
           |||||||||||||||| |||||||
Sbjct: 270 aagctcatggacaaatacaagaac 293
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>gb|AC153912.8| Mus musculus 10 BAC RP23-331E5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 206168

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 119   aatacaagcttctcaagaatgtcc 142
             |||| |||||||||||||||||||
Sbjct: 68096 aataaaagcttctcaagaatgtcc 68119
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>gb|AC157599.3| Mus musculus BAC clone RP23-138L13 from chromosome 17, complete sequence
          Length = 185556

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 425    tcaagaaagaaatcaaggatgtca 448
              |||||||||||||||| |||||||
Sbjct: 151900 tcaagaaagaaatcaaagatgtca 151877
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>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I,
             complete sequence
          Length = 93724

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 349   aagctcatggacaaatgcaagaac 372
             |||||||||||||||| |||||||
Sbjct: 89228 aagctcatggacaaatacaagaac 89251
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>gb|AY074917.1| Chlamydomonas reinhardtii ferroxidase-like protein (FLP1) mRNA,
           complete cds
          Length = 4762

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 96  gctgggagccatgttgacgg 115
           ||||||||||||||||||||
Sbjct: 833 gctgggagccatgttgacgg 814
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>gb|BT021137.1| Arabidopsis thaliana At1g06440 gene, complete cds
          Length = 1173

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 349 aagctcatggacaaatgcaagaac 372
           |||||||||||||||| |||||||
Sbjct: 124 aagctcatggacaaatacaagaac 147
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>gb|AF450137.1| Chlamydomonas reinhardtii multicopper ferroxidase (FOX1) mRNA,
           complete cds
          Length = 4908

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 96  gctgggagccatgttgacgg 115
           ||||||||||||||||||||
Sbjct: 882 gctgggagccatgttgacgg 863


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,673,894
Number of Sequences: 3902068
Number of extensions: 3673894
Number of successful extensions: 82365
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82158
Number of HSP's gapped (non-prelim): 207
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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