ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl56g02 |
|---|---|
| Clone Library Name | barley_pub |
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 171 bits (434), Expect = 5e-43 Identities = 84/121 (69%), Positives = 101/121 (83%) Frame = +1 Query: 73 VGCIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 252 +G I+ +TG + + LKG+VVLMRKN LD NDFGATV+DG+ E LG+GVTCQLISST V Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTAV 61 Query: 253 DHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 432 D NNG RGKVGAEA+LEQW L ++LP TTGE++F VTFDW VDKLGVPGAIIVKN+H++ Sbjct: 62 DPNNGNRGKVGAEASLEQW-LTSSLPSLTTGESRFGVTFDWDVDKLGVPGAIIVKNHHSN 120 Query: 433 E 435 E Sbjct: 121 E 121
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 171 bits (434), Expect = 5e-43 Identities = 84/121 (69%), Positives = 102/121 (84%) Frame = +1 Query: 73 VGCIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 252 +G I+ LTG + A LKGS+VLMRKNALD NDFGATV+DG++E LGRGVTCQL+SS+ V Sbjct: 2 LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSLV 60 Query: 253 DHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 432 D NNG RG+VG EA+LEQWL T+LP TTGE+KF VTF+W V+K+G+PGAIIVKNNHA+ Sbjct: 61 DPNNGNRGRVGTEASLEQWL--TSLPSLTTGESKFGVTFEWEVEKMGIPGAIIVKNNHAA 118 Query: 433 E 435 E Sbjct: 119 E 119
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 171 bits (432), Expect = 9e-43 Identities = 82/121 (67%), Positives = 99/121 (81%) Frame = +1 Query: 73 VGCIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 252 +G ++ LTG + A LKG+VVLMRKN LD NDFGAT++DG+ E LG+GVTCQLISST V Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAV 62 Query: 253 DHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 432 D +NGGRGKVGAEA LEQW+ T+LP TTGE+KF +TFDW V+KLGVPGAI+V N H+S Sbjct: 63 DQDNGGRGKVGAEAELEQWV--TSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNNYHSS 120 Query: 433 E 435 E Sbjct: 121 E 121
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 118 bits (295), Expect = 7e-27 Identities = 59/117 (50%), Positives = 80/117 (68%) Frame = +1 Query: 85 VSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNN 264 + D G G +KG VLM + LD DF A+++D V E+ G +TCQL+S+T D NN Sbjct: 5 LKDKLTGKNGNKIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATVADQNN 64 Query: 265 GGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGAIIVKNNHASE 435 GRG VG+EANLEQ L T+LP + GE+K V F+W +DK GVPGAII+KN+H+++ Sbjct: 65 EGRGIVGSEANLEQGL--TDLPSVSQGESKLTVRFNWEMDKHGVPGAIIIKNHHSTK 119
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 104 bits (260), Expect = 8e-23 Identities = 55/117 (47%), Positives = 75/117 (64%), Gaps = 3/117 (2%) Frame = +1 Query: 94 LTGG---LRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNN 264 LTGG +KG+VVLM+KN LDFNDF A+ +D + E LG +T +L+SS D N Sbjct: 9 LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSEN 68 Query: 265 GGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGAIIVKNNHASE 435 G +GK+G A+LE W+ T + T GE+ F VTFD+ D G PGA +++N+H SE Sbjct: 69 GSKGKLGKAAHLEDWI--TTITSLTAGESAFKVTFDYETD-FGYPGAFLIRNSHFSE 122
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 103 bits (256), Expect = 2e-22 Identities = 59/122 (48%), Positives = 80/122 (65%), Gaps = 1/122 (0%) Frame = +1 Query: 73 VGCIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLIS-STN 249 +G IV + G +KG V+LM+KN LDF + GA+V+DG+++LLG+ V+ QLIS S N Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISGSVN 62 Query: 250 VDHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGAIIVKNNHA 429 D G GK+ A LE WL T++ T GE+ F+VTFDW D+ GVPGA I+KN H Sbjct: 63 YD---GLEGKLSNPAYLESWL--TDITPITAGESTFSVTFDWDRDEFGVPGAFIIKNLHL 117 Query: 430 SE 435 +E Sbjct: 118 NE 119
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 97.4 bits (241), Expect = 1e-20 Identities = 56/123 (45%), Positives = 75/123 (60%), Gaps = 5/123 (4%) Frame = +1 Query: 82 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 246 ++ L GGL G H +KG+VV+M+KNALDF D ++ D + E LG+ V+ QLISS Sbjct: 1 MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSV 60 Query: 247 NVDHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGAIIVKNNH 426 D NG +GK A LE +LL L GE F VTFDW+ ++ GVPGA ++KN H Sbjct: 61 QSDPANGLQGKHSNPAYLENFLL--TLTPLAAGETAFGVTFDWN-EEFGVPGAFVIKNMH 117 Query: 427 ASE 435 +E Sbjct: 118 INE 120
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 92.4 bits (228), Expect = 4e-19 Identities = 53/123 (43%), Positives = 72/123 (58%), Gaps = 5/123 (4%) Frame = +1 Query: 82 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 246 ++ +T GL G H +KG+VV+M KN LDF D ++ + ++LG+ V+ QLISS Sbjct: 1 MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSV 60 Query: 247 NVDHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGAIIVKNNH 426 D NG +GK A LE L T P T E F VTFDW+ ++ GVPGA I+KN H Sbjct: 61 QGDPTNGLQGKHSNPAYLENSLF-TLTPLTAGSETAFGVTFDWN-EEFGVPGAFIIKNMH 118 Query: 427 ASE 435 +E Sbjct: 119 INE 121
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 86.7 bits (213), Expect = 2e-17 Identities = 45/107 (42%), Positives = 71/107 (66%), Gaps = 2/107 (1%) Frame = +1 Query: 121 LKGSVVLMRKNALDFNDFGATVMDGVTELLGR--GVTCQLISSTNVDHNNGGRGKVGAEA 294 ++G+ VL++K+ L DF A+++DGV +LG GV +L+S+T D +NGGRGK+G A Sbjct: 23 IRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAFRLVSATARDPSNGGRGKLGKPA 82 Query: 295 NLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGAIIVKNNHASE 435 +LE+ L + T GE+ F V F+W + G+PGA++V N++ SE Sbjct: 83 HLEE--LVVTMKSTAAGESVFRVAFEWD-ESQGIPGAVVVTNSNRSE 126
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 79.3 bits (194), Expect = 4e-15 Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 19/129 (14%) Frame = +1 Query: 91 DLTGGLRGAH-LKGSVVLMRKNALDFN--------------DFGATV----MDGVTELLG 213 ++TG L H ++G+VVLMRKN LDFN D G + +DG+T LG Sbjct: 4 NVTGLLNKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLG 63 Query: 214 RGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLG 393 R V+ QLIS+T D N G+GKVG + LE L +LP GE+ F + F+W ++G Sbjct: 64 RSVSLQLISATKSDAN--GKGKVGKDTFLEGVL--ASLPTLGAGESAFNIHFEWD-HEMG 118 Query: 394 VPGAIIVKN 420 +PGA +KN Sbjct: 119 IPGAFYIKN 127
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 75.9 bits (185), Expect = 4e-14 Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 14/125 (11%) Frame = +1 Query: 88 SDLTGGL-RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVT 225 S +TG L RG +KG+VVLMRKN LD N D + +D +T LGR V+ Sbjct: 3 SGVTGILNRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVS 62 Query: 226 CQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGA 405 QLIS+T D G+GK+G LE + ++LP G++ F + F+W D +G+PGA Sbjct: 63 LQLISATKPDAT--GKGKLGKATFLEG--IISSLPTLGAGQSAFKIHFEWD-DDMGIPGA 117 Query: 406 IIVKN 420 +KN Sbjct: 118 FYIKN 122
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 75.5 bits (184), Expect = 5e-14 Identities = 45/103 (43%), Positives = 63/103 (61%) Frame = +1 Query: 112 GAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAE 291 G +KG+VVLM KN L+ N G+ V D + LGR V+ QLIS+T D + G+GKVG + Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKD 61 Query: 292 ANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGAIIVKN 420 LE + T+LP GE+ F + F+W +G+PGA +KN Sbjct: 62 TFLEG--INTSLPTLGAGESAFNIHFEWD-GSMGIPGAFYIKN 101
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 73.6 bits (179), Expect = 2e-13 Identities = 52/138 (37%), Positives = 71/138 (51%), Gaps = 19/138 (13%) Frame = +1 Query: 64 MFGVGCIVSDLTGGLRGAH-LKGSVVLMRKNALDFNDFG------------------ATV 186 MF V + L G G H +KG+VVLMRKN LDFN + Sbjct: 1 MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGST 58 Query: 187 MDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVT 366 +D +T LGR V QLIS+T N G+GKVG + LE ++ +LP GE+ F + Sbjct: 59 LDNLTAFLGRSVALQLISATKPLAN--GKGKVGKDTFLEGIIV--SLPTLGAGESAFNIQ 114 Query: 367 FDWSVDKLGVPGAIIVKN 420 F+W + +G+PGA +KN Sbjct: 115 FEWD-ESMGIPGAFYIKN 131
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 72.0 bits (175), Expect = 6e-13 Identities = 49/124 (39%), Positives = 67/124 (54%), Gaps = 15/124 (12%) Frame = +1 Query: 94 LTGGL--RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVTC 228 + GGL RG +KG+VVLMRKN L N D + +D +T LGR V+ Sbjct: 1 MLGGLLHRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRPVSL 60 Query: 229 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGAI 408 QLIS+T D N G+GK+G LE + T+LP G++ F + F+W D G+ GA Sbjct: 61 QLISATKADAN--GKGKLGKATFLEG--IITSLPTLGAGQSAFKINFEWD-DGSGILGAF 115 Query: 409 IVKN 420 +KN Sbjct: 116 YIKN 119
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 69.3 bits (168), Expect = 4e-12 Identities = 47/126 (37%), Positives = 63/126 (50%), Gaps = 22/126 (17%) Frame = +1 Query: 109 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 222 +G +KG+VVLM KN LDFN + V+D T LGR + Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNI 66 Query: 223 TCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPG 402 + QLIS+T D G GKVG E LE+ LPT LP ++ F++ F+W G+PG Sbjct: 67 SMQLISATQTD--GSGNGKVGKEVYLEKH-LPT-LPTLGARQDAFSIFFEWDA-SFGIPG 121 Query: 403 AIIVKN 420 A +KN Sbjct: 122 AFYIKN 127
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 67.4 bits (163), Expect = 1e-11 Identities = 46/131 (35%), Positives = 64/131 (48%), Gaps = 22/131 (16%) Frame = +1 Query: 109 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 222 RG +KG+VVLM KN DFN+F +T ++DG T + R + Sbjct: 7 RGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRNI 66 Query: 223 TCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPG 402 QLIS+T D G GKVG + LE+ L +LP ++ F V F+W + G+P Sbjct: 67 AIQLISATKTD--GLGNGKVGKQTFLEKHL--PSLPNLGDRQDAFNVYFEWD-ENFGIPE 121 Query: 403 AIIVKNNHASE 435 A +KN SE Sbjct: 122 AFYIKNFMQSE 132
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 65.9 bits (159), Expect = 4e-11 Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 20/124 (16%) Frame = +1 Query: 109 RGAHLKGSVVLMRKNALDFN--------------------DFGATVMDGVTELLGRGVTC 228 RG LKG+V+LM+KN LD N +++D T LGR V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 229 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGAI 408 +LIS+T D + G+GKV EA LE L T++P ++ F+V F+W +G PGA Sbjct: 68 RLISATVADAS--GKGKVSKEAFLEGLL--TSIPTLGDKQSAFSVHFEWD-SNMGTPGAF 122 Query: 409 IVKN 420 ++N Sbjct: 123 YIEN 126
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 63.9 bits (154), Expect = 2e-10 Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 13/119 (10%) Frame = +1 Query: 103 GLRGAHLKGSVVLMRKNALDFND-------------FGATVMDGVTELLGRGVTCQLISS 243 G +G +KG++V+M+KN LD N F + +D +T ++ QLIS+ Sbjct: 5 GQKGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALT-FAATKISIQLISA 63 Query: 244 TNVDHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGAIIVKN 420 T D GG+GK+G NL + LP GE + V F+W D G+PGA +KN Sbjct: 64 TKAD---GGKGKIGKSTNLRGKI---TLPTLGAGEQAYDVNFEWDSD-FGIPGAFYIKN 115
>YAI7_SCHPO (Q09894) Hypothetical protein C24B11.07c in chromosome I| Length = 561 Score = 34.7 bits (78), Expect = 0.10 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = -3 Query: 317 GRSHCSRFASAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMR 138 G+ + R SAP+ + + + ++++S RS +PS+ +SLKS R Sbjct: 374 GKPNMGRIPSAPSLSKGRAMTADNMDMLSLTTRRSRRSLYSPSLMQMQQSLKSDYEGLGR 433 Query: 137 TTEPLRWAPR-RPPVR 93 T +P R+APR PPVR Sbjct: 434 TFDP-RFAPRGSPPVR 448
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 33.5 bits (75), Expect = 0.23 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 1/106 (0%) Frame = +1 Query: 121 LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANL 300 L+ ++ + RK D + A +D + +++GR V +LIS+ H + ++ Sbjct: 80 LRAALTVRRKQKEDIKEAVAGHLDALWDMVGRNVVLELISTK--IHPRTKKPMQSGRVSI 137 Query: 301 EQWLLPTNLPFTTTGENKFAVTFDWSVD-KLGVPGAIIVKNNHASE 435 + W G++ T +++VD G PGAI V N H E Sbjct: 138 KDWCQKRG----AKGDH-VVYTAEFTVDADFGEPGAIAVANRHNRE 178
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 32.3 bits (72), Expect = 0.51 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 5/73 (6%) Frame = -3 Query: 272 RPPLLWSTLVELMSWQVTPRPRSSVT-----PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 108 R P L++ L S PRPRS+ PS AP + + R+ PL W P+ Sbjct: 228 RSPDLFTPLSRPPSPLSLPRPRSAPARRPPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQ 287 Query: 107 RPPVRSLTMQPTP 69 R ++L+ PTP Sbjct: 288 R---QTLSRPPTP 297
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 32.3 bits (72), Expect = 0.51 Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 1/102 (0%) Frame = +1 Query: 133 VVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWL 312 V + R+ D D A +D + + +GR V +L+S T D G K A L W Sbjct: 72 VTVRRRRKEDAKDRFAEQLDALADRVGRSVLLELVS-TETDPRKGTPKKSKPSA-LVGWF 129 Query: 313 LPTNLPFTTTGENKFAVTFDWSVDK-LGVPGAIIVKNNHASE 435 ++ + T +++VD G PGA+ V N H E Sbjct: 130 DKKDVK-----AERVVYTAEFAVDAGFGEPGAVTVLNRHQRE 166
>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 31.2 bits (69), Expect = 1.1 Identities = 21/70 (30%), Positives = 30/70 (42%) Frame = -3 Query: 308 HCSRFASAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTE 129 H S P+ P P L ST+ + + V ++S TP A +SS + T Sbjct: 128 HTPTTESPPSRPAPTTLASTVGQPPTTSVVTTAQASSTPGTPTAESPDRSSNSSGVPPTA 187 Query: 128 PLRWAPRRPP 99 P+ AP PP Sbjct: 188 PVTEAPTSPP 197
>CAGE_HELPY (Q48252) CAG pathogenicity island protein 23 (Protein picB)| Length = 983 Score = 31.2 bits (69), Expect = 1.1 Identities = 22/68 (32%), Positives = 31/68 (45%) Frame = +1 Query: 229 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGAI 408 QLI++ DHN+ G A L + TN F +NK D+S +GV G+ Sbjct: 742 QLINAFGKDHNDPN----GLVARLAPFCKSTNGEFQWLFDNKATDRLDFSKTIIGVDGSS 797 Query: 409 IVKNNHAS 432 + NN S Sbjct: 798 FLDNNDVS 805
>CAGE_HELPJ (Q9ZLT4) CAG pathogenicity island protein 23 (Protein picB)| Length = 983 Score = 31.2 bits (69), Expect = 1.1 Identities = 22/68 (32%), Positives = 31/68 (45%) Frame = +1 Query: 229 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFTTTGENKFAVTFDWSVDKLGVPGAI 408 QLI++ DHN+ G A L + TN F +NK D+S +GV G+ Sbjct: 742 QLINAFGKDHNDPN----GLVARLAPFCKSTNGEFQWLFDNKATDRLDFSKTIIGVDGSS 797 Query: 409 IVKNNHAS 432 + NN S Sbjct: 798 FLDNNDVS 805
>UL14_EHV1V (P84404) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 1.5 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -2 Query: 183 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 7 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>UL14_EHV1B (P28949) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 1.5 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -2 Query: 183 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 7 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 30.0 bits (66), Expect = 2.5 Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 6/118 (5%) Frame = -3 Query: 401 PGTPSLSTDQSKVTANLFSPVVVNGRFVGR-SHCSRFASAPTFPRP-----PLLWSTLVE 240 PG PS Q A + + V + G ++ +SAP P P P + + V Sbjct: 1436 PGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVP 1495 Query: 239 LMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMQPTPN 66 M V +P SSV P+ T +L S P AP+ P +L+ P N Sbjct: 1496 SMIPSVAQQPPSSVAPA-TAPSSTLPPSQSSFAHVPSPAPPAPQHPSAAALSSAPADN 1552
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 29.6 bits (65), Expect = 3.3 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Frame = -2 Query: 186 DGGAEVVEVERVLAHEDDG-----ALEVGAPEAPRQVAH-DAADAKHLRSISG 46 DGGA V+ ER A +D+G E G+PE + H D D KH RS SG Sbjct: 15 DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH-RSDSG 66
>TRPM2_HUMAN (O94759) Transient receptor potential cation channel subfamily M| member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen-responsive element-associated Length = 1503 Score = 29.6 bits (65), Expect = 3.3 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +1 Query: 139 LMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 246 LM+K AL F+DF + G L G+TC+LI +T Sbjct: 856 LMKKAALYFSDFWNKLDVGAILLFVAGLTCRLIPAT 891
>NPAS3_HUMAN (Q8IXF0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 933 Score = 29.6 bits (65), Expect = 3.3 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -3 Query: 221 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 132 TP P S +PS+ +L+ S F+RM++T Sbjct: 241 TPEPVESTSPSLLTTDNTLERSFFIRMKST 270
>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 3707 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/61 (27%), Positives = 27/61 (44%) Frame = -3 Query: 407 MAPGTPSLSTDQSKVTANLFSPVVVNGRFVGRSHCSRFASAPTFPRPPLLWSTLVELMSW 228 +APGTP + ++S++T + HCS + P P + WS L + W Sbjct: 2528 VAPGTPQVQVEESELT--------LEAGHTATLHCSATGNPP----PTIHWSKLRAPLPW 2575 Query: 227 Q 225 Q Sbjct: 2576 Q 2576
>GLGC_ERWCT (Q6CZK2) Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)| (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) Length = 425 Score = 29.3 bits (64), Expect = 4.3 Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 8/90 (8%) Frame = +1 Query: 94 LTGGLRGAHLKGSVVLMRKNALDFN------DFGAT--VMDGVTELLGRGVTCQLISSTN 249 L GG RG LKG L K A+ F DF + + G+ + GV Q S T Sbjct: 25 LAGG-RGTRLKGLTALRAKPAVHFGGKFRIIDFALSNCLNSGIRRI---GVITQYQSHTL 80 Query: 250 VDHNNGGRGKVGAEANLEQWLLPTNLPFTT 339 V H G + AE N LLP ++T Sbjct: 81 VQHIQRGWSFLNAEMNEFVDLLPAQQRYST 110
>SYH_BURMA (Q62JW5) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 446 Score = 29.3 bits (64), Expect = 4.3 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 6/43 (13%) Frame = +1 Query: 298 LEQWLLPTNLPFTTT-----GENKFAVT-FDWSVDKLGVPGAI 408 L+Q L NLPFT G + + +T F+W DKLG G + Sbjct: 246 LQQLLKANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTV 288
>ATPG_GEOKA (Q5KUJ2) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 285 Score = 28.9 bits (63), Expect = 5.7 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = -2 Query: 423 VVLDDDGARHPQLVHRPVEGDGELVL 346 V L GA HP LV RPV+ G LV+ Sbjct: 56 VALGAGGASHPMLVSRPVKKTGYLVI 81
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 28.9 bits (63), Expect = 5.7 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = -2 Query: 186 DGGAEVVEVERVLAHEDDG---ALEVGAPEAPRQVAH-DAADAKH 64 DGGA V+ ER A +D+G E G+PE + H D D KH Sbjct: 13 DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH 57
>PE55_LUCCU (Q95UE8) Peritrophin-55 precursor| Length = 220 Score = 28.9 bits (63), Expect = 5.7 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 9/88 (10%) Frame = -3 Query: 305 CSRFASAPTFPR---------PPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSA 153 C F APT PL+ T + + TP S TP +T AP S + Sbjct: 84 CDNFIPAPTCEYLKQTTDVECVPLVKPTTAAPTTLKTTP---SKTTPIVTTAPPSTPVPS 140 Query: 152 FLRMRTTEPLRWAPRRPPVRSLTMQPTP 69 + +P +PP + T+ P+P Sbjct: 141 TIVTNKPDPTTPKTTKPPKVTTTVNPSP 168
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)| Length = 279 Score = 28.5 bits (62), Expect = 7.4 Identities = 24/73 (32%), Positives = 25/73 (34%) Frame = -3 Query: 284 PTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRR 105 P P TL S TP P S TPS T P S T P P Sbjct: 75 PALSPTPTPSPTLSPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTP-TPSP 133 Query: 104 PPVRSLTMQPTPN 66 P S T PTP+ Sbjct: 134 TPTPSPTPSPTPS 146
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 28.5 bits (62), Expect = 7.4 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 Query: 114 APEAPRQVAHDAADAKHLRSISGECG 37 AP AP++ AAD H+ S G CG Sbjct: 74 APPAPQKPTQQAADLNHILSERGACG 99
>NPAS3_MOUSE (Q9QZQ0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 925 Score = 28.5 bits (62), Expect = 7.4 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -3 Query: 221 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 132 TP P + +PS+ +L+ S F+RM++T Sbjct: 246 TPEPVETTSPSLLTTDNTLERSFFIRMKST 275
>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)| Length = 1971 Score = 28.5 bits (62), Expect = 7.4 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -3 Query: 218 PRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRS 90 P P SS TP++ V P + ++ L +T+P P+ PV S Sbjct: 1026 PPPASSATPALHVQPLAPAAAPSLLQASTQPEVLLPKPAPVYS 1068
>PROML_BRARE (Q9W735) Prominin-like protein (Fragment)| Length = 713 Score = 28.1 bits (61), Expect = 9.7 Identities = 21/83 (25%), Positives = 35/83 (42%) Frame = +1 Query: 145 RKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTN 324 RKNA F DF T++ T ++ GV C ++ N+ G + L+ +N Sbjct: 144 RKNADCFEDFLTTLLLTTTFIITAGVLCAYAANQNLSSQLKGMRR----------LVKSN 193 Query: 325 LPFTTTGENKFAVTFDWSVDKLG 393 L T N+ D+ + + G Sbjct: 194 LKDLHTFANQTPAQIDYLISRYG 216
>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte| stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1404 Score = 28.1 bits (61), Expect = 9.7 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 5/79 (6%) Frame = -3 Query: 290 SAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTV---APKSLKSSAFLRMRTTEPLR 120 SAPT P+ P +T + P P ++ P+ T AP + K A T P + Sbjct: 388 SAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPA-----PTTPKK 442 Query: 119 WAPRRP--PVRSLTMQPTP 69 AP P P + +PTP Sbjct: 443 PAPTTPKEPAPTTPKEPTP 461
>SIPD_SALTY (Q56026) Cell invasion protein sipD (Salmonella invasion protein D)| Length = 343 Score = 28.1 bits (61), Expect = 9.7 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 11/69 (15%) Frame = +1 Query: 229 QLISSTNVDHNNGGRG-KVGAEANLEQWLLPTNLPFTTTGE--NKFAVTFDWS------- 378 Q+ S+T + G G KV EA QWL NLP + + + VT D + Sbjct: 207 QINSNTVLFPAQSGSGVKVATEAEARQWLSELNLPNSCLKSYGSGYVVTVDLTPLQKMVQ 266 Query: 379 -VDKLGVPG 402 +D LG PG Sbjct: 267 DIDGLGAPG 275
>HUNB_DROIK (O46242) Protein hunchback (Fragments)| Length = 193 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 7/68 (10%) Frame = -3 Query: 272 RPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRT-------TEPLRWA 114 RPP L + + +M + P P ++ T + T A S ++A + +++ T P+ Sbjct: 101 RPPGLPNPMQTIMPANMRPSPTATTTATTTAAAASTTTAATVALQSNDKLQALTPPMDVT 160 Query: 113 PRRPPVRS 90 P + P +S Sbjct: 161 PPKSPAKS 168
>PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +1 Query: 43 LPRDRAKMFGVG----CIVSDLTGGLRGAHLKGSVVLMRKNALD 162 L + R +FG G +D T LR + VVLM KNA+D Sbjct: 127 LEKGRVVIFGGGNGAPFFTTDTTSTLRALEIGADVVLMAKNAVD 170
>TBX10_MOUSE (Q810F8) T-box transcription factor TBX10 (T-box protein 10)| Length = 385 Score = 28.1 bits (61), Expect = 9.7 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Frame = -3 Query: 233 SWQVTPRPRSSV--TPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMQPTPNI 63 SW VTPRP S+ +++P LK SA T++ + R P + P P++ Sbjct: 257 SWPVTPRPLLSIPARSRSSLSPCLLKGSAEREKDTSKASASSSRTPTQPHNQLLPAPDV 315
>EOMES_HUMAN (O95936) Eomesodermin homolog| Length = 686 Score = 28.1 bits (61), Expect = 9.7 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = -3 Query: 431 EAWLFLTMMAPGTPSL--STDQSKVTANLFSPVVVNGRFVGRSHCSRFASAPTFP 273 + WL + PGT L S+ +S+ T++ P + + SH + PTFP Sbjct: 516 QRWLVTPVQQPGTNKLDISSYESEYTSSTLLPYGIKSLPLQTSHALGYYPDPTFP 570
>ATKA_BACHK (Q6HN79) Potassium-transporting ATPase A chain (EC 3.6.3.12)| (Potassium-translocating ATPase A chain) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium-binding and translocating subunit A) Length = 555 Score = 28.1 bits (61), Expect = 9.7 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 13/66 (19%) Frame = +1 Query: 178 ATVMDGVTELLGRGVTCQLISSTNVDHNNGG---------RGKVGAEANLEQ----WLLP 318 A +DGV + + RG +S + +N GG G +N+ Q LLP Sbjct: 200 AQTIDGVKQSIVRGPVASFVSIKELGNNGGGFFGTNSTHPFENPGQMSNILQMMLMMLLP 259 Query: 319 TNLPFT 336 T LPFT Sbjct: 260 TALPFT 265 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,030,683 Number of Sequences: 219361 Number of extensions: 890081 Number of successful extensions: 3710 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3551 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3664 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
