>KRUC_SHEEP (P26372) Keratin, ultra high-sulfur matrix protein (UHS keratin)|
          Length = 182

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = -1

Query: 110 CSAGCAWECAFVDWIGVRGAARVCSSSCCWAFLCC 6
           CS GC   C      G       CSSSCC    CC
Sbjct: 6   CSGGCGSSCG-----GCGSRCGGCSSSCCVPVCCC 35

>PAX8_RAT (P51974) Paired box protein Pax-8|
          Length = 458

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 275 PAVASDPAPPQRILRQPFLDLVMVGSGGSLAPHLP 171
           P ++S  + P  +    FLDL  VGSGG     +P
Sbjct: 314 PELSSSSSTPSSLSSSAFLDLQQVGSGGPAGASVP 348

>KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-associated protein|
           5.8) (Ultrahigh sulfur keratin-associated protein 5.8)
           (Keratin, ultra high-sulfur matrix protein B) (UHS
           keratin B) (UHS KerB)
          Length = 187

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = -1

Query: 110 CSAGCAWECAFVDWIGVRGAARVCSSSCCWAFLCC 6
           CS GC   C      G       C SSCC    CC
Sbjct: 6   CSGGCGSGCG-----GCGSGCGGCGSSCCVPICCC 35

>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated protein|
           5.6) (Ultrahigh sulfur keratin-associated protein 5.6)
          Length = 129

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = -1

Query: 110 CSAGCAWECAFVDWIGVRGAARVCSSSCCWAFLCC 6
           CS GC   C      G       C SSCC    CC
Sbjct: 6   CSGGCGSGCG-----GCGSGCGGCGSSCCVPICCC 35


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.306    0.118    0.324 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,126,932
Number of Sequences: 219361
Number of extensions: 464300
Number of successful extensions: 1025
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)