>ENAN_BPK1F (Q04830) Endo-N-acetylneuraminidase (EC 3.2.1.129) (Endo-N)|
           (Endosialidase) (G102)
          Length = 919

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
 Frame = +2

Query: 164 YIPGTDDTFSHPPTLFIDNNCEAPLVRKGTPTDLQC------PDD-VHRDERVGGI 310
           Y+ G +D F+  P  + DN+ + P    G P+DL C      PD+ V RD R G +
Sbjct: 715 YMFGGEDHFN--PWTYGDNSAKDPFKSDGHPSDLYCYKMKIGPDNRVSRDFRYGAV 768

>RHO_TREPA (O83281) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 519

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +2

Query: 38  FQIIGDRTSEKGCIVPLNFLDGSSKVLTIDQSLLKPNFGQEEYIPGTDDTFSHPPTLFID 217
           F ++ + T   G I    F  GS ++L      L+    Q  Y+PG+DD +  P  + + 
Sbjct: 135 FHVLKNHTENGGVI----FASGSLEILPDGYGFLRSP--QNSYLPGSDDIYVSPSQIRLF 188

Query: 218 N 220
           N
Sbjct: 189 N 189

>Y06P_BPT4 (P39223) Hypothetical 23.8 kDa protein in e-segB intergenic region|
          Length = 202

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -2

Query: 229 FTIIIDKQCWGVRKRVISSRNVFFLTKVRFQKGLVDS*HF 110
           FT+I+D +     KR++S RN+  +    F K LV++ +F
Sbjct: 139 FTLIVDSETKHENKRILSKRNILNIVDDLFDK-LVENPNF 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,043,424
Number of Sequences: 219361
Number of extensions: 1065031
Number of successful extensions: 2368
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2368
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)