>IPO8_HUMAN (O15397) Importin-8 (Imp8) (Ran-binding protein 8) (RanBP8)|
          Length = 1037

 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 46/146 (31%), Positives = 70/146 (47%)
 Frame = +2

Query: 23  LIKLICKIFWSSIYLEIPKQLFEPNIFNAWIVLFLNLLERPVPLEGQPSDPDARKAWGWW 202
           L K I KIF++ +   +P QL        W+ +F  +++R VP E    D D R    WW
Sbjct: 200 LQKQILKIFYALVQYALPLQLVNNQTMTTWMEIFRTIIDRTVPPETLHIDEDDRPELVWW 259

Query: 203 KVKKWITHILNRLYSRFADMKVHKPESKAFAQMFQKNYAGKILGCHLRLLNAIRTGGYLP 382
           K KKW  HI+ RL+ R+        E   F++ F K YA  I    L++L+  R   Y+ 
Sbjct: 260 KCKKWALHIVARLFERYGSAGNVTKEYFEFSEFFLKTYAVGIQQVLLKILDQYRQKEYVA 319

Query: 383 ERVINLILQYLTNSLTKNSMYQLMQP 460
            RV+     YL   +  +  ++ M+P
Sbjct: 320 PRVLQQAFNYLNQGVVHSITWKQMKP 345

>IPO8_MOUSE (Q7TMY7) Importin-8 (Imp8) (Ran-binding protein 8) (RanBP8)|
          Length = 1010

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 46/146 (31%), Positives = 69/146 (47%)
 Frame = +2

Query: 23  LIKLICKIFWSSIYLEIPKQLFEPNIFNAWIVLFLNLLERPVPLEGQPSDPDARKAWGWW 202
           L K I KIF++ +   +P QL        W+ +F  +++R VP E    D D R    WW
Sbjct: 200 LQKQILKIFYALVQYALPLQLVNHQTMTTWMEIFRTIIDRTVPPETLQIDEDDRPELVWW 259

Query: 203 KVKKWITHILNRLYSRFADMKVHKPESKAFAQMFQKNYAGKILGCHLRLLNAIRTGGYLP 382
           K KKW  HI+ RL+ R+        E   F++ F K YA  I    L++L+  R   Y+ 
Sbjct: 260 KCKKWALHIVARLFERYGSPGNVTKEYFEFSEFFLKTYAVGIQQVLLKILDQYRQKEYIA 319

Query: 383 ERVINLILQYLTNSLTKNSMYQLMQP 460
            RV+     YL   +     ++ M+P
Sbjct: 320 PRVLQQAFNYLNQGVVHAVTWKQMKP 345

>IPO7_HUMAN (O95373) Importin-7 (Imp7) (Ran-binding protein 7) (RanBP7)|
          Length = 1038

 Score = 75.1 bits (183), Expect = 8e-14
 Identities = 41/144 (28%), Positives = 68/144 (47%)
 Frame = +2

Query: 29  KLICKIFWSSIYLEIPKQLFEPNIFNAWIVLFLNLLERPVPLEGQPSDPDARKAWGWWKV 208
           K I KIF++ +   +P +L        WI +   ++ R VP E    + D R    WWK 
Sbjct: 201 KQIFKIFYALVQYTLPLELINQQNLTEWIEILKTVVNRDVPNETLQVEEDDRPELPWWKC 260

Query: 209 KKWITHILNRLYSRFADMKVHKPESKAFAQMFQKNYAGKILGCHLRLLNAIRTGGYLPER 388
           KKW  HIL RL+ R+        E   FA++F K +A  +    L++L   +   Y+  R
Sbjct: 261 KKWALHILARLFERYGSPGNVSKEYNEFAEVFLKAFAVGVQQVLLKVLYQYKEKQYMAPR 320

Query: 389 VINLILQYLTNSLTKNSMYQLMQP 460
           V+   L Y+   ++    ++ ++P
Sbjct: 321 VLQQTLNYINQGVSHALTWKNLKP 344

>IPO7_MOUSE (Q9EPL8) Importin-7 (Imp7) (Ran-binding protein 7) (RanBP7)|
          Length = 1038

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 40/144 (27%), Positives = 68/144 (47%)
 Frame = +2

Query: 29  KLICKIFWSSIYLEIPKQLFEPNIFNAWIVLFLNLLERPVPLEGQPSDPDARKAWGWWKV 208
           K I KIF++ +   +P +L        W+ +   ++ R VP E    + D R    WWK 
Sbjct: 201 KQIFKIFYALVQYTLPLELINQQNLTEWVEILKTVVNRDVPNETLQVEEDDRPELPWWKC 260

Query: 209 KKWITHILNRLYSRFADMKVHKPESKAFAQMFQKNYAGKILGCHLRLLNAIRTGGYLPER 388
           KKW  HIL RL+ R+        E   FA++F K +A  +    L++L   +   Y+  R
Sbjct: 261 KKWALHILARLFERYGSPGNVSKEYNEFAEVFLKAFAVGVQQVLLKVLYQYKEKQYMAPR 320

Query: 389 VINLILQYLTNSLTKNSMYQLMQP 460
           V+   L Y+   ++    ++ ++P
Sbjct: 321 VLQQTLNYINQGVSHALTWKNLKP 344

>NMD5_YEAST (P46970) Nonsense-mediated mRNA decay protein 5|
          Length = 1048

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
 Frame = +2

Query: 11  EVADLIKLICKIFWSSIYLEIPKQLFEPNIFNAWIVLFLNLLERPVPLEG-QPSDPDARK 187
           ++ +L+KLI KI+    Y ++P  L     F  W   F++++++P+P E    SD + R 
Sbjct: 207 QIGELVKLIIKIYKFVSYHDLPFTLQRSESFTPWACFFVSIIQQPLPQEVLSISDIEVRS 266

Query: 188 AWGWWKVKKWITHILNRLYSRFADMKV-HKPESKAFAQMFQKNYAGKILGCHLRLLNAIR 364
              W K KKW    L RL+ R+A   +  K +   F QM+ + +  + L      +    
Sbjct: 267 KNPWVKCKKWALANLYRLFQRYASTSLTRKFQYDEFKQMYCEEFLTQFLQVVFDQIEKWG 326

Query: 365 TGG-YLPERVINLILQYLTNSLTKNSMYQLMQP 460
           TG  +L +  +  IL ++   + + + ++L+ P
Sbjct: 327 TGQLWLSDECLYYILNFVEQCVVQKTTWKLVGP 359

>US10_HCMVA (P09728) Unique short US10 glycoprotein precursor (gpUS10) (HXLF2)|
          Length = 185

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = +2

Query: 35  ICKIFWSSIYLEIPKQLFEPNIFNAWIVLFLNLLERPVPLEGQPSDPDARKAWGW 199
           IC ++W  +     ++  EP  F    V+  ++L+  V L GQ   P   +A  W
Sbjct: 13  ICLLWWLGVVAAATEETREPTYFTCGCVIQNHVLKGAVKLYGQFPSPKTLRASAW 67

>VNS1_BTV1S (P33472) Nonstructural protein NS1|
          Length = 552

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +2

Query: 284 KAFAQMFQKNYAGKILGCHLRLLNAIRTGGYLPERV 391
           K+F+Q ++++  GK+  C ++LL   R  G + E V
Sbjct: 87  KSFSQPYEEDVEGKMKRCRVQLLEDYRKSGMMDEAV 122

>VNS1_BTV1A (P33471) Nonstructural protein NS1|
          Length = 552

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 284 KAFAQMFQKNYAGKILGCHLRLLNAIRTGGYLPERV 391
           K+F+Q ++++  GKI  C  +LL   R  G + E V
Sbjct: 87  KSFSQPYEEDIEGKIKRCGAQLLEDYRKSGMMEEAV 122


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,967,999
Number of Sequences: 219361
Number of extensions: 1435486
Number of successful extensions: 4200
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4198
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)