ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl56e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_471938.1| Oryza sativa (japonica cultivar-group), predic... 525 e-146
2emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4,... 204 2e-49
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
5dbj|AP005067.2| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
6ref|NM_128723.2| Arabidopsis thaliana protein transporter AT2G31... 44 0.40
7ref|NM_115764.3| Arabidopsis thaliana protein transporter AT3G59... 44 0.40
8ref|NM_001035811.1| Arabidopsis thaliana protein transporter AT3... 44 0.40
9emb|AL590727.5| Human DNA sequence from clone RP11-111D3 on chro... 44 0.40
10gb|AY056143.2| Arabidopsis thaliana At3g59020 mRNA sequence 44 0.40
11gb|AC007071.7| Arabidopsis thaliana chromosome 2 clone T9H9 map ... 44 0.40
12dbj|AK117271.1| Arabidopsis thaliana At2g31660 mRNA for putative... 44 0.40
13gb|AY016021.1| Mus musculus clone 03245 alpha globin gene cluste... 42 1.6
14gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosom... 42 1.6
15emb|CT009736.8| Mouse DNA sequence from clone RP23-99F22 on chro... 42 1.6
16gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar N... 42 1.6
17dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
18gb|AC007561.4| Homo sapiens BAC clone RP11-394E1 from 2, complet... 42 1.6
19gb|AC154342.2| Mus musculus BAC clone RP23-227D10 from 17, compl... 42 1.6
20gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, compl... 42 1.6
21gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
22emb|AL929446.5| Mouse DNA sequence from clone RP23-177M10 on chr... 42 1.6
23gb|AC170875.2| Mus musculus BAC clone RP24-266D3 from chromosome... 40 6.2
24gb|AY757363.1| Homo sapiens putative L-2-hydroxyglutarate dehydr... 40 6.2
25gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold 40 6.2
26gb|AC109170.10| Mus musculus chromosome 8, clone RP23-87B3, comp... 40 6.2
27emb|CR753817.13| Zebrafish DNA sequence from clone DKEY-195M11 i... 40 6.2
28gb|AC123794.4| Mus musculus BAC clone RP24-315P14 from chromosom... 40 6.2
29gb|AC122195.4| Mus musculus BAC clone RP23-49D1 from 8, complete... 40 6.2
30gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, com... 40 6.2
31gb|AF067217.3| Caenorhabditis elegans cosmid F56A6, complete seq... 40 6.2
32gb|AC103627.6| Mus musculus chromosome 1, clone RP24-241N3, comp... 40 6.2
33emb|BX000440.10| Zebrafish DNA sequence from clone CH211-14L9 in... 40 6.2
34emb|AL445528.16| Human DNA sequence from clone RP11-419N10 on ch... 40 6.2
35emb|AL353639.10| Human DNA sequence from clone RP11-664D14 on ch... 40 6.2
36emb|AL109841.16|HSJ826I18 Human DNA sequence from clone RP5-826I... 40 6.2
37dbj|AK022680.1| Homo sapiens cDNA FLJ12618 fis, clone NT2RM40016... 40 6.2
38gb|DP000059.1| Carollia perspicillata target 117 genomic scaffold 40 6.2
39gb|AC104110.2| Homo sapiens chromosome 5 clone RP11-160A17, comp... 40 6.2
40ref|NM_024884.1| Homo sapiens L-2-hydroxyglutarate dehydrogenase... 40 6.2
41gb|BC006117.1| Homo sapiens L-2-hydroxyglutarate dehydrogenase, ... 40 6.2
42gb|AC155655.8| Mus musculus 6 BAC RP24-66L18 (Roswell Park Cance... 40 6.2
43gb|AF229360.1|AF229360 Ameiurus nebulosus corticotropin releasin... 40 6.2
44gb|AY167664.1| Bombyx mori chymotrypsin inhibitor CI13 gene, com... 40 6.2
45gb|AC073165.7|AC073165 Homo sapiens chromosome 5 clone RP11-54E9... 40 6.2
46gb|AC146656.3| Otolemur garnettii clone CH256-389C8, complete se... 40 6.2
47emb|AL714005.17| Zebrafish DNA sequence from clone BUSM1-13F19 i... 40 6.2
48emb|AL359397.3|CNS05TE2 Human chromosome 14 DNA sequence BAC R-2... 40 6.2
49emb|AL109758.3|CNS018OV Human chromosome 14 DNA sequence BAC R-8... 40 6.2
50emb|AJ630269.1| Chironomus tentans mRNA for HRP130 protein 40 6.2
51emb|AL691472.6| Mouse DNA sequence from clone RP23-217C12 on chr... 40 6.2 
>ref|XM_471938.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2424

 Score =  525 bits (265), Expect = e-146
 Identities = 412/461 (89%)
 Strand = Plus / Plus

                                                                        
Query: 2    cctccaattgaagttgctgacttgatcaagctgatctgcaaaatattctggtcctcaatt 61
            |||||||||||||| |||||||||||||||||||| |||||||| |||||||| || |||
Sbjct: 568  cctccaattgaagtagctgacttgatcaagctgatatgcaaaattttctggtcatccatt 627

                                                                        
Query: 62   tatctagaaattccaaaacaactgtttgaaccaaatatcttcaatgcatggattgttctg 121
            ||||||||||||||||| ||||| ||||| |||||| |||||||| | |||||  || ||
Sbjct: 628  tatctagaaattccaaagcaactttttgatccaaatgtcttcaatacttggatgattttg 687

                                                                        
Query: 122  ttcttaaacttgttggaaaggccagttccattggaagggcaaccatcggatcctgacgct 181
            |||||||||||  ||||  | ||||||||| ||||||| ||||||| ||||||||| || 
Sbjct: 688  ttcttaaacttactggagcgaccagttccagtggaaggacaaccattggatcctgatgcg 747

                                                                        
Query: 182  aggaaagcttggggctggtggaaagtcaagaaatggattacccatatcttgaaccgttta 241
            |||||| ||||||| ||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 748  aggaaatcttggggatggtggaaagtcaagaaatggattatccatatattgaaccgttta 807

                                                                        
Query: 242  tacagtcggtttgctgatatgaaggttcataaaccagagagtaaagcttttgctcaaatg 301
            |||| ||||||||||||||||||| |||| | |||||| || ||||| ||||||||||||
Sbjct: 808  tacactcggtttgctgatatgaagcttcagagaccagaaagcaaagcctttgctcaaatg 867

                                                                        
Query: 302  tttcaaaagaactatgctggaaaaattctgggatgccatctacggttgctcaatgcaatt 361
            || |||||||||||||||||||||||| |||| |||||| | | ||||||||||||||| 
Sbjct: 868  ttccaaaagaactatgctggaaaaattttggggtgccatttgcagttgctcaatgcaata 927

                                                                        
Query: 362  cgcactggtggctatttgcctgagagggttattaatcttatccttcaatatctcaccaac 421
            || |||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||
Sbjct: 928  cgtactggtggctatttgcctgatagggttatcaatcttattcttcaatatcttaccaac 987

                                                     
Query: 422  agtctcacgaagaacagcatgtatcagctgatgcaaccaca 462
            ||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 988  agtgtcacgaagaacagcatgtatcagcttatgcaaccaca 1028
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>emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008A08,
             complete sequence
          Length = 130521

 Score =  204 bits (103), Expect = 2e-49
 Identities = 157/175 (89%)
 Strand = Plus / Plus

                                                                         
Query: 249   ggtttgctgatatgaaggttcataaaccagagagtaaagcttttgctcaaatgtttcaaa 308
             ||||||||||||||||| |||| | |||||| || ||||| |||||||||||||| ||||
Sbjct: 69260 ggtttgctgatatgaagcttcagagaccagaaagcaaagcctttgctcaaatgttccaaa 69319

                                                                         
Query: 309   agaactatgctggaaaaattctgggatgccatctacggttgctcaatgcaattcgcactg 368
             |||||||||||||||||||| |||| |||||| | | ||||||||||||||| || ||||
Sbjct: 69320 agaactatgctggaaaaattttggggtgccatttgcagttgctcaatgcaatacgtactg 69379

                                                                    
Query: 369   gtggctatttgcctgagagggttattaatcttatccttcaatatctcaccaacag 423
             |||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||
Sbjct: 69380 gtggctatttgcctgatagggttatcaatcttattcttcaatatcttaccaacag 69434



 Score =  180 bits (91), Expect = 3e-42
 Identities = 163/187 (87%)
 Strand = Plus / Plus

                                                                         
Query: 65    ctagaaattccaaaacaactgtttgaaccaaatatcttcaatgcatggattgttctgttc 124
             |||||||||||||| ||||| ||||| |||||| |||||||| | |||||  || |||||
Sbjct: 69011 ctagaaattccaaagcaactttttgatccaaatgtcttcaatacttggatgattttgttc 69070

                                                                         
Query: 125   ttaaacttgttggaaaggccagttccattggaagggcaaccatcggatcctgacgctagg 184
             ||||||||  ||||  | ||||||||| ||||||| ||||||| ||||||||| || |||
Sbjct: 69071 ttaaacttactggagcgaccagttccagtggaaggacaaccattggatcctgatgcgagg 69130

                                                                         
Query: 185   aaagcttggggctggtggaaagtcaagaaatggattacccatatcttgaaccgtttatac 244
             ||| ||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 69131 aaatcttggggatggtggaaagtcaagaaatggattatccatatattgaaccgtttatac 69190

                    
Query: 245   agtcggt 251
             | |||||
Sbjct: 69191 actcggt 69197



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                         
Query: 2     cctccaattgaagttgctgacttgatcaagctgatctgcaaaatattctggtcctcaatt 61
             |||||||||||||| |||||||||||||||||||| |||||||| |||||||| || |||
Sbjct: 68879 cctccaattgaagtagctgacttgatcaagctgatatgcaaaattttctggtcatccatt 68938

                
Query: 62    tat 64
             |||
Sbjct: 68939 tat 68941



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                       
Query: 421   cagtctcacgaagaacagcatgtatcagctgatgcaaccaca 462
             |||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 69784 cagtgtcacgaagaacagcatgtatcagcttatgcaaccaca 69825
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  204 bits (103), Expect = 2e-49
 Identities = 157/175 (89%)
 Strand = Plus / Plus

                                                                            
Query: 249      ggtttgctgatatgaaggttcataaaccagagagtaaagcttttgctcaaatgtttcaaa 308
                ||||||||||||||||| |||| | |||||| || ||||| |||||||||||||| ||||
Sbjct: 15882695 ggtttgctgatatgaagcttcagagaccagaaagcaaagcctttgctcaaatgttccaaa 15882754

                                                                            
Query: 309      agaactatgctggaaaaattctgggatgccatctacggttgctcaatgcaattcgcactg 368
                |||||||||||||||||||| |||| |||||| | | ||||||||||||||| || ||||
Sbjct: 15882755 agaactatgctggaaaaattttggggtgccatttgcagttgctcaatgcaatacgtactg 15882814

                                                                       
Query: 369      gtggctatttgcctgagagggttattaatcttatccttcaatatctcaccaacag 423
                |||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||
Sbjct: 15882815 gtggctatttgcctgatagggttatcaatcttattcttcaatatcttaccaacag 15882869



 Score =  180 bits (91), Expect = 3e-42
 Identities = 163/187 (87%)
 Strand = Plus / Plus

                                                                            
Query: 65       ctagaaattccaaaacaactgtttgaaccaaatatcttcaatgcatggattgttctgttc 124
                |||||||||||||| ||||| ||||| |||||| |||||||| | |||||  || |||||
Sbjct: 15882446 ctagaaattccaaagcaactttttgatccaaatgtcttcaatacttggatgattttgttc 15882505

                                                                            
Query: 125      ttaaacttgttggaaaggccagttccattggaagggcaaccatcggatcctgacgctagg 184
                ||||||||  ||||  | ||||||||| ||||||| ||||||| ||||||||| || |||
Sbjct: 15882506 ttaaacttactggagcgaccagttccagtggaaggacaaccattggatcctgatgcgagg 15882565

                                                                            
Query: 185      aaagcttggggctggtggaaagtcaagaaatggattacccatatcttgaaccgtttatac 244
                ||| ||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 15882566 aaatcttggggatggtggaaagtcaagaaatggattatccatatattgaaccgtttatac 15882625

                       
Query: 245      agtcggt 251
                | |||||
Sbjct: 15882626 actcggt 15882632



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                            
Query: 2        cctccaattgaagttgctgacttgatcaagctgatctgcaaaatattctggtcctcaatt 61
                |||||||||||||| |||||||||||||||||||| |||||||| |||||||| || |||
Sbjct: 15882314 cctccaattgaagtagctgacttgatcaagctgatatgcaaaattttctggtcatccatt 15882373

                   
Query: 62       tat 64
                |||
Sbjct: 15882374 tat 15882376



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                          
Query: 421      cagtctcacgaagaacagcatgtatcagctgatgcaaccaca 462
                |||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 15883219 cagtgtcacgaagaacagcatgtatcagcttatgcaaccaca 15883260
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  137 bits (69), Expect = 4e-29
 Identities = 147/173 (84%)
 Strand = Plus / Plus

                                                                            
Query: 251      tttgctgatatgaaggttcataaaccagagagtaaagcttttgctcaaatgtttcaaaag 310
                |||| |||||||||  | || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 16307165 tttggtgatatgaaactacagaaaccagagagtaaagcttttgcacaaatgtttcaaaag 16307224

                                                                            
Query: 311      aactatgctggaaaaattctgggatgccatctacggttgctcaatgcaattcgcactggt 370
                ||||||||||||| |||| |||| |||||  | | | | || |||||| |||| ||||||
Sbjct: 16307225 aactatgctggaagaattttgggctgccacttgcagattctgaatgcagttcgaactggt 16307284

                                                                     
Query: 371      ggctatttgcctgagagggttattaatcttatccttcaatatctcaccaacag 423
                | ||||||||| || |||||||| |||||| | |||||||| || ||||||||
Sbjct: 16307285 gactatttgccagacagggttatcaatcttgttcttcaatacctaaccaacag 16307337



 Score =  129 bits (65), Expect = 9e-27
 Identities = 116/133 (87%)
 Strand = Plus / Plus

                                                                            
Query: 86       tttgaaccaaatatcttcaatgcatggattgttctgttcttaaacttgttggaaaggcca 145
                ||||| |||||| ||||||||||||||||   | ||||  |||||||||||||||| |||
Sbjct: 16306927 tttgacccaaatgtcttcaatgcatggatgagtttgtttataaacttgttggaaagacca 16306986

                                                                            
Query: 146      gttccattggaagggcaaccatcggatcctgacgctaggaaagcttggggctggtggaaa 205
                |||||| ||||||| ||||||| ||||||||| |  |||||| |||||||||||||||||
Sbjct: 16306987 gttccagtggaaggccaaccattggatcctgatgtgaggaaatcttggggctggtggaaa 16307046

                             
Query: 206      gtcaagaaatgga 218
                || ||||||||||
Sbjct: 16307047 gttaagaaatgga 16307059



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                            
Query: 2        cctccaattgaagttgctgacttgatcaagctgatctgcaaaatattctggtcctcaatt 61
                |||||||||||||| |||||| |||||||||| || ||||||||||||||||| ||||||
Sbjct: 16306747 cctccaattgaagtagctgacctgatcaagctaatatgcaaaatattctggtcttcaatt 16306806

                   
Query: 62       tat 64
                |||
Sbjct: 16306807 tat 16306809
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>dbj|AP005067.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0487H05
          Length = 176057

 Score =  137 bits (69), Expect = 4e-29
 Identities = 147/173 (84%)
 Strand = Plus / Plus

                                                                          
Query: 251    tttgctgatatgaaggttcataaaccagagagtaaagcttttgctcaaatgtttcaaaag 310
              |||| |||||||||  | || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 141652 tttggtgatatgaaactacagaaaccagagagtaaagcttttgcacaaatgtttcaaaag 141711

                                                                          
Query: 311    aactatgctggaaaaattctgggatgccatctacggttgctcaatgcaattcgcactggt 370
              ||||||||||||| |||| |||| |||||  | | | | || |||||| |||| ||||||
Sbjct: 141712 aactatgctggaagaattttgggctgccacttgcagattctgaatgcagttcgaactggt 141771

                                                                   
Query: 371    ggctatttgcctgagagggttattaatcttatccttcaatatctcaccaacag 423
              | ||||||||| || |||||||| |||||| | |||||||| || ||||||||
Sbjct: 141772 gactatttgccagacagggttatcaatcttgttcttcaatacctaaccaacag 141824



 Score =  129 bits (65), Expect = 9e-27
 Identities = 116/133 (87%)
 Strand = Plus / Plus

                                                                          
Query: 86     tttgaaccaaatatcttcaatgcatggattgttctgttcttaaacttgttggaaaggcca 145
              ||||| |||||| ||||||||||||||||   | ||||  |||||||||||||||| |||
Sbjct: 141414 tttgacccaaatgtcttcaatgcatggatgagtttgtttataaacttgttggaaagacca 141473

                                                                          
Query: 146    gttccattggaagggcaaccatcggatcctgacgctaggaaagcttggggctggtggaaa 205
              |||||| ||||||| ||||||| ||||||||| |  |||||| |||||||||||||||||
Sbjct: 141474 gttccagtggaaggccaaccattggatcctgatgtgaggaaatcttggggctggtggaaa 141533

                           
Query: 206    gtcaagaaatgga 218
              || ||||||||||
Sbjct: 141534 gttaagaaatgga 141546



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                          
Query: 2      cctccaattgaagttgctgacttgatcaagctgatctgcaaaatattctggtcctcaatt 61
              |||||||||||||| |||||| |||||||||| || ||||||||||||||||| ||||||
Sbjct: 141234 cctccaattgaagtagctgacctgatcaagctaatatgcaaaatattctggtcttcaatt 141293

                 
Query: 62     tat 64
              |||
Sbjct: 141294 tat 141296
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>ref|NM_128723.2| Arabidopsis thaliana protein transporter AT2G31660 mRNA, complete cds
          Length = 3812

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 189  cttggggctggtggaaagtcaagaaatgga 218
            |||||||||||||||| |||||||| ||||
Sbjct: 985  cttggggctggtggaaggtcaagaagtgga 1014
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>ref|NM_115764.3| Arabidopsis thaliana protein transporter AT3G59020 transcript
           variant AT3G59020.1 mRNA, complete cds
          Length = 3940

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 91/114 (79%)
 Strand = Plus / Plus

                                                                       
Query: 26  atcaagctgatctgcaaaatattctggtcctcaatttatctagaaattccaaaacaactg 85
           |||||||| || ||||| ||||||||||| |  |||||||||||  |||| | || | ||
Sbjct: 726 atcaagcttatttgcaagatattctggtcatgtatttatctagagcttccgagaccattg 785

                                                                 
Query: 86  tttgaaccaaatatcttcaatgcatggattgttctgttcttaaacttgttggaa 139
           ||||| |||||  | || ||||| ||||| | ||||||| ||||| | ||||||
Sbjct: 786 tttgatccaaacttttttaatgcttggatgggtctgttcctaaacattttggaa 839



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 90/113 (79%)
 Strand = Plus / Plus

                                                                        
Query: 191  tggggctggtggaaagtcaagaaatggattacccatatcttgaaccgtttatacagtcgg 250
            ||||| |||||||| | |||||| |||||| | |||||||| ||| |  |||||| ||||
Sbjct: 891  tggggatggtggaaggccaagaagtggattgctcatatcttaaacaggctatacactcgg 950

                                                                 
Query: 251  tttgctgatatgaaggttcataaaccagagagtaaagcttttgctcaaatgtt 303
            ||||  ||| ||||  | || || ||||| |  ||||| ||||||||||||||
Sbjct: 951  tttggagatctgaaactccagaatccagataacaaagcctttgctcaaatgtt 1003
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>ref|NM_001035811.1| Arabidopsis thaliana protein transporter AT3G59020 transcript
           variant AT3G59020.2 mRNA, complete cds
          Length = 3943

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 91/114 (79%)
 Strand = Plus / Plus

                                                                       
Query: 26  atcaagctgatctgcaaaatattctggtcctcaatttatctagaaattccaaaacaactg 85
           |||||||| || ||||| ||||||||||| |  |||||||||||  |||| | || | ||
Sbjct: 726 atcaagcttatttgcaagatattctggtcatgtatttatctagagcttccgagaccattg 785

                                                                 
Query: 86  tttgaaccaaatatcttcaatgcatggattgttctgttcttaaacttgttggaa 139
           ||||| |||||  | || ||||| ||||| | ||||||| ||||| | ||||||
Sbjct: 786 tttgatccaaacttttttaatgcttggatgggtctgttcctaaacattttggaa 839



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 90/113 (79%)
 Strand = Plus / Plus

                                                                        
Query: 191  tggggctggtggaaagtcaagaaatggattacccatatcttgaaccgtttatacagtcgg 250
            ||||| |||||||| | |||||| |||||| | |||||||| ||| |  |||||| ||||
Sbjct: 891  tggggatggtggaaggccaagaagtggattgctcatatcttaaacaggctatacactcgg 950

                                                                 
Query: 251  tttgctgatatgaaggttcataaaccagagagtaaagcttttgctcaaatgtt 303
            ||||  ||| ||||  | || || ||||| |  ||||| ||||||||||||||
Sbjct: 951  tttggagatctgaaactccagaatccagataacaaagcctttgctcaaatgtt 1003
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>emb|AL590727.5| Human DNA sequence from clone RP11-111D3 on chromosome 6 Contains a
              eukaryotic translation initiation factor 4E binding protein
              pseudogene and part of a novel gene, complete sequence
          Length = 127913

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 60     tttatctagaaattccaaaacaactg 85
              |||||||||||||||||||| |||||
Sbjct: 106452 tttatctagaaattccaaaataactg 106477
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>gb|AY056143.2| Arabidopsis thaliana At3g59020 mRNA sequence
          Length = 2824

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 91/114 (79%)
 Strand = Plus / Plus

                                                                       
Query: 26  atcaagctgatctgcaaaatattctggtcctcaatttatctagaaattccaaaacaactg 85
           |||||||| || ||||| ||||||||||| |  |||||||||||  |||| | || | ||
Sbjct: 726 atcaagcttatttgcaagatattctggtcatgtatttatctagagcttccgagaccattg 785

                                                                 
Query: 86  tttgaaccaaatatcttcaatgcatggattgttctgttcttaaacttgttggaa 139
           ||||| |||||  | || ||||| ||||| | ||||||| ||||| | ||||||
Sbjct: 786 tttgatccaaacttttttaatgcttggatgggtctgttcctaaacattttggaa 839



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 90/113 (79%)
 Strand = Plus / Plus

                                                                        
Query: 191  tggggctggtggaaagtcaagaaatggattacccatatcttgaaccgtttatacagtcgg 250
            ||||| |||||||| | |||||| |||||| | |||||||| ||| |  |||||| ||||
Sbjct: 891  tggggatggtggaaggccaagaagtggattgctcatatcttaaacaggctatacactcgg 950

                                                                 
Query: 251  tttgctgatatgaaggttcataaaccagagagtaaagcttttgctcaaatgtt 303
            ||||  ||| ||||  | || || ||||| |  ||||| ||||||||||||||
Sbjct: 951  tttggagatctgaaactccagaatccagataacaaagcctttgctcaaatgtt 1003
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>gb|AC007071.7| Arabidopsis thaliana chromosome 2 clone T9H9 map nga361, complete
             sequence
          Length = 79734

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 189   cttggggctggtggaaagtcaagaaatgga 218
             |||||||||||||||| |||||||| ||||
Sbjct: 55317 cttggggctggtggaaggtcaagaagtgga 55346
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>dbj|AK117271.1| Arabidopsis thaliana At2g31660 mRNA for putative importin, complete
            cds, clone: RAFL16-82-H24
          Length = 3817

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 189  cttggggctggtggaaagtcaagaaatgga 218
            |||||||||||||||| |||||||| ||||
Sbjct: 983  cttggggctggtggaaggtcaagaagtgga 1012
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>gb|AY016021.1| Mus musculus clone 03245 alpha globin gene cluster, complete sequence
          Length = 183192

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 128   aacttgttggaaaggccagtt 148
             |||||||||||||||||||||
Sbjct: 58073 aacttgttggaaaggccagtt 58053
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>gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosome 10, complete
             sequence
          Length = 198030

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 109   atggattgttctgttcttaaa 129
             |||||||||||||||||||||
Sbjct: 36592 atggattgttctgttcttaaa 36612
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>emb|CT009736.8| Mouse DNA sequence from clone RP23-99F22 on chromosome 17, complete
             sequence
          Length = 210326

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 305   caaaagaactatgctggaaaa 325
             |||||||||||||||||||||
Sbjct: 48307 caaaagaactatgctggaaaa 48287
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>gb|AC113338.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone
             OSJNBa0091J06 from chromosome 10, complete sequence
          Length = 141911

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 307   aaagaactatgctggaaaaat 327
             |||||||||||||||||||||
Sbjct: 97525 aaagaactatgctggaaaaat 97545



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 307   aaagaactatgctggaaaaat 327
             |||||||||||||||||||||
Sbjct: 77563 aaagaactatgctggaaaaat 77583
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 307      aaagaactatgctggaaaaat 327
                |||||||||||||||||||||
Sbjct: 11404454 aaagaactatgctggaaaaat 11404474



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 307      aaagaactatgctggaaaaat 327
                |||||||||||||||||||||
Sbjct: 11384492 aaagaactatgctggaaaaat 11384512
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>gb|AC007561.4| Homo sapiens BAC clone RP11-394E1 from 2, complete sequence
          Length = 106093

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 29    aagctgatctgcaaaatattc 49
             |||||||||||||||||||||
Sbjct: 27248 aagctgatctgcaaaatattc 27228
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>gb|AC154342.2| Mus musculus BAC clone RP23-227D10 from 17, complete sequence
          Length = 199709

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 305   caaaagaactatgctggaaaa 325
             |||||||||||||||||||||
Sbjct: 84178 caaaagaactatgctggaaaa 84158
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>gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, complete sequence
          Length = 174449

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 109    atggattgttctgttcttaaa 129
              |||||||||||||||||||||
Sbjct: 104051 atggattgttctgttcttaaa 104071
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 307      aaagaactatgctggaaaaat 327
                |||||||||||||||||||||
Sbjct: 11410894 aaagaactatgctggaaaaat 11410914



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 307      aaagaactatgctggaaaaat 327
                |||||||||||||||||||||
Sbjct: 11390932 aaagaactatgctggaaaaat 11390952
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>emb|AL929446.5| Mouse DNA sequence from clone RP23-177M10 on chromosome 11, complete
             sequence
          Length = 118812

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 128   aacttgttggaaaggccagtt 148
             |||||||||||||||||||||
Sbjct: 78692 aacttgttggaaaggccagtt 78672
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>gb|AC170875.2| Mus musculus BAC clone RP24-266D3 from chromosome 3, complete sequence
          Length = 155248

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 114   ttgttctgttcttaaacttgttgg 137
             |||||||||||||||| |||||||
Sbjct: 49754 ttgttctgttcttaaatttgttgg 49777
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>gb|AY757363.1| Homo sapiens putative L-2-hydroxyglutarate dehydrogenase (L2HGDH)
            mRNA, complete cds
          Length = 1406

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  ggaaaaattctgggatgcca 339
            ||||||||||||||||||||
Sbjct: 1112 ggaaaaattctgggatgcca 1093
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>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold
          Length = 1743090

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 295     tcaaatgtttcaaaagaact 314
               ||||||||||||||||||||
Sbjct: 1544054 tcaaatgtttcaaaagaact 1544073
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>gb|AC109170.10| Mus musculus chromosome 8, clone RP23-87B3, complete sequence
          Length = 274518

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    aaattccaaaacaactgttt 88
             ||||||||||||||||||||
Sbjct: 64360 aaattccaaaacaactgttt 64379
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>emb|CR753817.13| Zebrafish DNA sequence from clone DKEY-195M11 in linkage group 6,
              complete sequence
          Length = 236737

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 103    caatgcatggattgttctgttctt 126
              ||||||||||||| ||||||||||
Sbjct: 176830 caatgcatggatttttctgttctt 176807
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>gb|AC123794.4| Mus musculus BAC clone RP24-315P14 from chromosome 8, complete sequence
          Length = 187246

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    aaattccaaaacaactgttt 88
             ||||||||||||||||||||
Sbjct: 73665 aaattccaaaacaactgttt 73684
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>gb|AC122195.4| Mus musculus BAC clone RP23-49D1 from 8, complete sequence
          Length = 204335

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 304    tcaaaagaactatgctggaa 323
              ||||||||||||||||||||
Sbjct: 185235 tcaaaagaactatgctggaa 185216
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>gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, complete sequence
          Length = 249008

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     actgtttgaaccaaatatct 101
              ||||||||||||||||||||
Sbjct: 237998 actgtttgaaccaaatatct 237979
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>gb|AF067217.3| Caenorhabditis elegans cosmid F56A6, complete sequence
          Length = 51099

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    aaattccaaaacaactgttt 88
             ||||||||||||||||||||
Sbjct: 32197 aaattccaaaacaactgttt 32178



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    aaattccaaaacaactgttt 88
             ||||||||||||||||||||
Sbjct: 31754 aaattccaaaacaactgttt 31735
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>gb|AC103627.6| Mus musculus chromosome 1, clone RP24-241N3, complete sequence
          Length = 201487

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     actgtttgaaccaaatatct 101
              ||||||||||||||||||||
Sbjct: 175541 actgtttgaaccaaatatct 175560
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>emb|BX000440.10| Zebrafish DNA sequence from clone CH211-14L9 in linkage group 16,
             complete sequence
          Length = 162906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   tttgctcaaatgtttcaaaa 309
             ||||||||||||||||||||
Sbjct: 84051 tttgctcaaatgtttcaaaa 84032
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>emb|AL445528.16| Human DNA sequence from clone RP11-419N10 on chromosome 1 Contains the
             APCS gene for serum amyloid P component, the OR10J6P locus
             for olfactory receptor family 10 subfamily J member 6
             pseudogene, a pentraxin-related C-reactive protein (CRP)
             pseudogene, the CRP gene for pentraxin-related C-reactive
             protein and a ribosomal protein L27 (RPL27) pseudogene,
             complete sequence
          Length = 195274

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 59    atttatctagaaattccaaaacaa 82
             ||||||||||||| ||||||||||
Sbjct: 75090 atttatctagaaaatccaaaacaa 75113
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>emb|AL353639.10| Human DNA sequence from clone RP11-664D14 on chromosome 9 Contains part
             of the MPDZ gene for multiple PDZ domain protein and GSSs,
             complete sequence
          Length = 103822

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    atctgcaaaatattctggtc 54
             ||||||||||||||||||||
Sbjct: 58791 atctgcaaaatattctggtc 58810
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>emb|AL109841.16|HSJ826I18 Human DNA sequence from clone RP5-826I18 on chromosome 20p12.2-13
             Contains part of the SLC23A2 gene for solute carrier
             family 23 (nucleobase transporters) member 2, complete
             sequence
          Length = 26187

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    aaccaaatatcttcaatgca 109
             ||||||||||||||||||||
Sbjct: 13290 aaccaaatatcttcaatgca 13309
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>dbj|AK022680.1| Homo sapiens cDNA FLJ12618 fis, clone NT2RM4001666, weakly similar to
            HYPOTHETICAL 48.6 KD PROTEIN IN ALPA-GABP INTERGENIC
            REGION
          Length = 2064

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  ggaaaaattctgggatgcca 339
            ||||||||||||||||||||
Sbjct: 1177 ggaaaaattctgggatgcca 1158
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>gb|DP000059.1| Carollia perspicillata target 117 genomic scaffold
          Length = 359132

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 426   tcacgaagaacagcatgtat 445
             ||||||||||||||||||||
Sbjct: 45588 tcacgaagaacagcatgtat 45569
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>gb|AC104110.2| Homo sapiens chromosome 5 clone RP11-160A17, complete sequence
          Length = 165636

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 96    atatcttcaatgcatggattgttctgtt 123
             ||||||||||| |||||||| |||||||
Sbjct: 84001 atatcttcaattcatggattcttctgtt 84028
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>ref|NM_024884.1| Homo sapiens L-2-hydroxyglutarate dehydrogenase (L2HGDH), mRNA
          Length = 2064

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  ggaaaaattctgggatgcca 339
            ||||||||||||||||||||
Sbjct: 1177 ggaaaaattctgggatgcca 1158
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>gb|BC006117.1| Homo sapiens L-2-hydroxyglutarate dehydrogenase, mRNA (cDNA clone
            MGC:12994 IMAGE:3504996), complete cds
          Length = 1404

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  ggaaaaattctgggatgcca 339
            ||||||||||||||||||||
Sbjct: 1130 ggaaaaattctgggatgcca 1111
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>gb|AC155655.8| Mus musculus 6 BAC RP24-66L18 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 203618

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    aaatgtttcaaaagaactat 316
              ||||||||||||||||||||
Sbjct: 137880 aaatgtttcaaaagaactat 137861
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>gb|AF229360.1|AF229360 Ameiurus nebulosus corticotropin releasing factor receptor 2 mRNA,
           complete cds
          Length = 1218

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 426 tcacgaagaacagcatgtat 445
           ||||||||||||||||||||
Sbjct: 967 tcacgaagaacagcatgtat 948
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>gb|AY167664.1| Bombyx mori chymotrypsin inhibitor CI13 gene, complete cds
          Length = 2566

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 194  ggctggtggaaagtcaagaaatgg 217
            ||||||||| ||||||||||||||
Sbjct: 1589 ggctggtggcaagtcaagaaatgg 1612
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>gb|AC073165.7|AC073165 Homo sapiens chromosome 5 clone RP11-54E9, complete sequence
          Length = 152869

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 96    atatcttcaatgcatggattgttctgtt 123
             ||||||||||| |||||||| |||||||
Sbjct: 19173 atatcttcaattcatggattcttctgtt 19200
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>gb|AC146656.3| Otolemur garnettii clone CH256-389C8, complete sequence
          Length = 185109

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    tcaaatgtttcaaaagaact 314
              ||||||||||||||||||||
Sbjct: 183738 tcaaatgtttcaaaagaact 183757
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>emb|AL714005.17| Zebrafish DNA sequence from clone BUSM1-13F19 in linkage group 9,
             complete sequence
          Length = 104829

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   caaaagaactatgctggaaa 324
             ||||||||||||||||||||
Sbjct: 52299 caaaagaactatgctggaaa 52280
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>emb|AL359397.3|CNS05TE2 Human chromosome 14 DNA sequence BAC R-247L20 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168193

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   ggaaaaattctgggatgcca 339
             ||||||||||||||||||||
Sbjct: 14683 ggaaaaattctgggatgcca 14702
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>emb|AL109758.3|CNS018OV Human chromosome 14 DNA sequence BAC R-873E2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209512

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    ggaaaaattctgggatgcca 339
              ||||||||||||||||||||
Sbjct: 204614 ggaaaaattctgggatgcca 204633
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>emb|AJ630269.1| Chironomus tentans mRNA for HRP130 protein
          Length = 3213

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 2   cctccaattgaagttgctga 21
           ||||||||||||||||||||
Sbjct: 971 cctccaattgaagttgctga 990
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>emb|AL691472.6| Mouse DNA sequence from clone RP23-217C12 on chromosome 2, complete
              sequence
          Length = 212364

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    ggtggaaagtcaagaaatgg 217
              ||||||||||||||||||||
Sbjct: 133944 ggtggaaagtcaagaaatgg 133963


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,547,883
Number of Sequences: 3902068
Number of extensions: 4547883
Number of successful extensions: 85903
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85637
Number of HSP's gapped (non-prelim): 262
length of query: 462
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 440
effective length of database: 17,147,199,772
effective search space: 7544767899680
effective search space used: 7544767899680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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