ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl56e10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 180 bits (91), Expect = 2e-42 Identities = 124/135 (91%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcccagaacgccgtcgtcctcgccgaggacaagaa 353 ||||||||||||| |||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 23828627 cgacgacgacgacgacgccgacccgtcccagagcgccgtcgtcctcgccgaggacaagaa 23828568 Query: 354 gtactaccccaccgccgaggaggtctacggcccgggcgtcgaggcgctcgtcatggacga 413 |||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||| Sbjct: 23828567 gtactaccccaccgccgaggaggtgtacgggcccggcgtggaggcgctcgtcatggacga 23828508 Query: 414 ggacgagcaggcgct 428 ||| |||||| |||| Sbjct: 23828507 ggatgagcagccgct 23828493 Score = 143 bits (72), Expect = 5e-31 Identities = 78/80 (97%) Strand = Plus / Minus Query: 115 atggacgacagcctctacgacgagttcggcaactacatcggcccggcgctcgccgactcc 174 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 23828812 atggacgacagcctctacgacgagttcggcaactacatcggcccggagctcgccgactcc 23828753 Query: 175 gacgccgatgactcggacgc 194 |||||||||||||| ||||| Sbjct: 23828752 gacgccgatgactccgacgc 23828733 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 cccaaatcccaaacctccccc 58 ||||||||||||||||||||| Sbjct: 23828902 cccaaatcccaaacctccccc 23828882
>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0556B08 Length = 136775 Score = 180 bits (91), Expect = 2e-42 Identities = 124/135 (91%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcccagaacgccgtcgtcctcgccgaggacaagaa 353 ||||||||||||| |||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 68292 cgacgacgacgacgacgccgacccgtcccagagcgccgtcgtcctcgccgaggacaagaa 68233 Query: 354 gtactaccccaccgccgaggaggtctacggcccgggcgtcgaggcgctcgtcatggacga 413 |||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||| Sbjct: 68232 gtactaccccaccgccgaggaggtgtacgggcccggcgtggaggcgctcgtcatggacga 68173 Query: 414 ggacgagcaggcgct 428 ||| |||||| |||| Sbjct: 68172 ggatgagcagccgct 68158 Score = 143 bits (72), Expect = 5e-31 Identities = 78/80 (97%) Strand = Plus / Minus Query: 115 atggacgacagcctctacgacgagttcggcaactacatcggcccggcgctcgccgactcc 174 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 68477 atggacgacagcctctacgacgagttcggcaactacatcggcccggagctcgccgactcc 68418 Query: 175 gacgccgatgactcggacgc 194 |||||||||||||| ||||| Sbjct: 68417 gacgccgatgactccgacgc 68398 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 cccaaatcccaaacctccccc 58 ||||||||||||||||||||| Sbjct: 68567 cccaaatcccaaacctccccc 68547
>dbj|AK102908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113H11, full insert sequence Length = 3520 Score = 180 bits (91), Expect = 2e-42 Identities = 124/135 (91%) Strand = Plus / Plus Query: 294 cgacgacgacgactacgccgacgccgcccagaacgccgtcgtcctcgccgaggacaagaa 353 ||||||||||||| |||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 292 cgacgacgacgacgacgccgacccgtcccagagcgccgtcgtcctcgccgaggacaagaa 351 Query: 354 gtactaccccaccgccgaggaggtctacggcccgggcgtcgaggcgctcgtcatggacga 413 |||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||| Sbjct: 352 gtactaccccaccgccgaggaggtgtacgggcccggcgtggaggcgctcgtcatggacga 411 Query: 414 ggacgagcaggcgct 428 ||| |||||| |||| Sbjct: 412 ggatgagcagccgct 426 Score = 143 bits (72), Expect = 5e-31 Identities = 78/80 (97%) Strand = Plus / Plus Query: 115 atggacgacagcctctacgacgagttcggcaactacatcggcccggcgctcgccgactcc 174 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107 atggacgacagcctctacgacgagttcggcaactacatcggcccggagctcgccgactcc 166 Query: 175 gacgccgatgactcggacgc 194 |||||||||||||| ||||| Sbjct: 167 gacgccgatgactccgacgc 186 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 cccaaatcccaaacctccccc 58 ||||||||||||||||||||| Sbjct: 17 cccaaatcccaaacctccccc 37
>ref|NM_001031501.1| Gallus gallus elongation factor Tu GTP binding domain containing 2 (EFTUD2), mRNA Length = 3457 Score = 83.8 bits (42), Expect = 4e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 342 cgaggacaagaagtactaccccaccgccgaggaggtctacgg 383 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 cgaggacaagaagtactaccccaccgccgaggaggtctacgg 260
>emb|AJ851526.1| Gallus gallus mRNA for hypothetical protein, clone 4m11 Length = 3457 Score = 83.8 bits (42), Expect = 4e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 342 cgaggacaagaagtactaccccaccgccgaggaggtctacgg 383 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 cgaggacaagaagtactaccccaccgccgaggaggtctacgg 260
>ref|XM_866246.1| PREDICTED: Bos taurus similar to 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa) (Elongation factor Tu GTP binding domain protein 2), transcript variant 2 (LOC509425), mRNA Length = 3368 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 342 cgaggacaagaagtactaccccaccgccgaggaggtctacggccc 386 |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 259 cgaggacaagaagtactaccccaccgccgaggaggtgtacggccc 303
>ref|XM_877979.1| PREDICTED: Bos taurus similar to 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa) (Elongation factor Tu GTP binding domain protein 2), transcript variant 7 (LOC509425), mRNA Length = 3377 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 342 cgaggacaagaagtactaccccaccgccgaggaggtctacggccc 386 |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 259 cgaggacaagaagtactaccccaccgccgaggaggtgtacggccc 303
>ref|XM_586376.2| PREDICTED: Bos taurus similar to 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa) (Elongation factor Tu GTP binding domain protein 2), transcript variant 1 (LOC509425), mRNA Length = 3380 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 342 cgaggacaagaagtactaccccaccgccgaggaggtctacggccc 386 |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 259 cgaggacaagaagtactaccccaccgccgaggaggtgtacggccc 303
>ref|XM_877897.1| PREDICTED: Bos taurus similar to 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa) (Elongation factor Tu GTP binding domain protein 2), transcript variant 6 (LOC509425), mRNA Length = 3365 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 342 cgaggacaagaagtactaccccaccgccgaggaggtctacggccc 386 |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 259 cgaggacaagaagtactaccccaccgccgaggaggtgtacggccc 303
>ref|XM_877853.1| PREDICTED: Bos taurus similar to 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa) (Elongation factor Tu GTP binding domain protein 2), transcript variant 5 (LOC509425), mRNA Length = 3374 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 342 cgaggacaagaagtactaccccaccgccgaggaggtctacggccc 386 |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 259 cgaggacaagaagtactaccccaccgccgaggaggtgtacggccc 303
>ref|NM_011431.2| Mus musculus elongation factor Tu GTP binding domain containing 2 (Eftud2), mRNA Length = 3271 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 205 gaggacaagaagtactaccccacggccgaggaggtgtacgg 245
>gb|BC052674.1| Mus musculus elongation factor Tu GTP binding domain containing 2, mRNA (cDNA clone MGC:60573 IMAGE:30061580), complete cds Length = 3345 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 239 gaggacaagaagtactaccccacggccgaggaggtgtacgg 279
>gb|BC054778.1| Mus musculus elongation factor Tu GTP binding domain containing 2, mRNA (cDNA clone MGC:65664 IMAGE:6810127), complete cds Length = 3363 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 229 gaggacaagaagtactaccccacggccgaggaggtgtacgg 269
>dbj|AK154878.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630110H03 product:U5 small nuclear ribonucleoprotein, full insert sequence Length = 3306 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 245 gaggacaagaagtactaccccacggccgaggaggtgtacgg 285
>dbj|AK153473.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830164N17 product:U5 small nuclear ribonucleoprotein, full insert sequence Length = 3296 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 235 gaggacaagaagtactaccccacggccgaggaggtgtacgg 275
>dbj|AK165624.1| Mus musculus RCB-0464 Meth-A cDNA, RIKEN full-length enriched library, clone:G430077N09 product:U5 small nuclear ribonucleoprotein, full insert sequence Length = 3298 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 237 gaggacaagaagtactaccccacggccgaggaggtgtacgg 277
>dbj|AK150158.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530139P05 product:U5 small nuclear ribonucleoprotein, full insert sequence Length = 3295 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 235 gaggacaagaagtactaccccacggccgaggaggtgtacgg 275
>dbj|AK165151.1| Mus musculus 10 days neonate olfactory brain cDNA, RIKEN full-length enriched library, clone:E530017I21 product:U5 small nuclear ribonucleoprotein, full insert sequence Length = 3289 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 253 gaggacaagaagtactaccccacggccgaggaggtgtacgg 293
>dbj|AK052242.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330012L15 product:U5 small nuclear ribonucleoprotein 116 kDa, full insert sequence Length = 3281 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 221 gaggacaagaagtactaccccacggccgaggaggtgtacgg 261
>dbj|AK172875.1| Mus musculus mRNA for mKIAA0031 protein Length = 3278 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 217 gaggacaagaagtactaccccacggccgaggaggtgtacgg 257
>dbj|AK203588.1| Mus musculus cDNA, clone:Y1G0145H05, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000021306, based on BLAT search Length = 237 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 23 gaggacaagaagtactaccccacggccgaggaggtgtacgg 63
>dbj|AK203192.1| Mus musculus cDNA, clone:Y1G0144B14, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000021306, based on BLAT search Length = 236 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 23 gaggacaagaagtactaccccacggccgaggaggtgtacgg 63
>dbj|AK202497.1| Mus musculus cDNA, clone:Y1G0141L10, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000021306, based on BLAT search Length = 236 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 23 gaggacaagaagtactaccccacggccgaggaggtgtacgg 63
>dbj|AK196741.1| Mus musculus cDNA, clone:Y1G0122M15, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000021306, based on BLAT search Length = 263 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 50 gaggacaagaagtactaccccacggccgaggaggtgtacgg 90
>dbj|AK196016.1| Mus musculus cDNA, clone:Y1G0120G18, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000021306, based on BLAT search Length = 237 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 23 gaggacaagaagtactaccccacggccgaggaggtgtacgg 63
>dbj|AK195071.1| Mus musculus cDNA, clone:Y1G0117E21, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000021306, based on BLAT search Length = 236 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 23 gaggacaagaagtactaccccacggccgaggaggtgtacgg 63
>dbj|AK193531.1| Mus musculus cDNA, clone:Y1G0112J21, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000021306, based on BLAT search Length = 236 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 23 gaggacaagaagtactaccccacggccgaggaggtgtacgg 63
>dbj|AK190907.1| Mus musculus cDNA, clone:Y1G0104D09, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000021306, based on BLAT search Length = 237 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 23 gaggacaagaagtactaccccacggccgaggaggtgtacgg 63
>gb|U97079.1|MMU97079 Mus musculus U5-116kD mRNA, complete cds Length = 3271 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 205 gaggacaagaagtactaccccacggccgaggaggtgtacgg 245
>emb|AL731670.13| Mouse DNA sequence from clone RP23-463E7 on chromosome 11, complete sequence Length = 198411 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 42039 gaggacaagaagtactaccccacggccgaggaggtgtacgg 41999
>ref|XM_753922.1| Ustilago maydis 521 hypothetical protein (UM02868.1) partial mRNA Length = 2991 Score = 60.0 bits (30), Expect = 6e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 129 ctacgacgagttcggcaactacatcggccc 158 |||||||||||||||||||||||||||||| Sbjct: 9 ctacgacgagttcggcaactacatcggccc 38
>gb|AC138131.16| Medicago truncatula clone mth2-21h11, complete sequence Length = 127696 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 332 tcgtcctcgccgaggacaagaagtactaccccaccgccgaggaggtctacggc 384 ||||||||||||| ||||| |||||||||||||| ||||| || || |||||| Sbjct: 83065 tcgtcctcgccgaagacaaaaagtactaccccacagccgaagaagtttacggc 83013
>dbj|AK177548.1| Mus musculus cDNA, clone:Y0G0103C12, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000021306, based on BLAT search Length = 140 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 347 acaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||| ||||||||||| ||||| Sbjct: 54 acaagaagtactaccccacggccgaggaggtgtacgg 90
>ref|XM_548058.2| PREDICTED: Canis familiaris similar to 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa) (Elongation factor Tu GTP binding domain protein 2) (LOC490935), mRNA Length = 3355 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacggccc 386 ||||||||||||||||||||||| || |||||||| || ||||| Sbjct: 254 gaggacaagaagtactaccccacagctgaggaggtgtatggccc 297
>ref|XM_213492.3| PREDICTED: Rattus norvegicus similar to 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa) (LOC287739), mRNA Length = 3016 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacggccc 386 |||||||||||||||||||| || ||||||||||| || ||||| Sbjct: 278 gaggacaagaagtactaccctacagccgaggaggtgtatggccc 321
>ref|XM_511559.1| PREDICTED: Pan troglodytes U5 snRNP-specific protein, 116 kD (LOC454738), mRNA Length = 2442 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggt 377 |||||||||||||||||||| || ||||||||||| Sbjct: 181 gaggacaagaagtactacccaacagccgaggaggt 215
>gb|BC002360.2| Homo sapiens elongation factor Tu GTP binding domain containing 2, mRNA (cDNA clone MGC:8581 IMAGE:2960986), complete cds Length = 3332 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggt 377 |||||||||||||||||||| || ||||||||||| Sbjct: 212 gaggacaagaagtactacccaacagccgaggaggt 246
>emb|CR860551.1| Pongo pygmaeus mRNA; cDNA DKFZp459P087 (from clone DKFZp459P087) Length = 3384 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggt 377 |||||||||||||||||||| || ||||||||||| Sbjct: 270 gaggacaagaagtactacccaacagccgaggaggt 304
>ref|NM_004247.2| Homo sapiens elongation factor Tu GTP binding domain containing 2 (EFTUD2), mRNA Length = 3332 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggt 377 |||||||||||||||||||| || ||||||||||| Sbjct: 212 gaggacaagaagtactacccaacagccgaggaggt 246
>dbj|AK128148.1| Homo sapiens cDNA FLJ46271 fis, clone TESTI4028182, highly similar to 116 kDa U5 small nuclear ribonucleoprotein component Length = 3676 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggt 377 |||||||||||||||||||| || ||||||||||| Sbjct: 579 gaggacaagaagtactacccaacagccgaggaggt 613
>emb|CR456774.1| Homo sapiens full open reading frame cDNA clone RZPDo834E104D for gene U5-116KD, U5 snRNP-specific protein, 116 kD; complete cds, incl. stopcodon Length = 2919 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggt 377 |||||||||||||||||||| || ||||||||||| Sbjct: 181 gaggacaagaagtactacccaacagccgaggaggt 215
>gb|AC015936.14| Homo sapiens chromosome 17, clone CTD-2534I21, complete sequence Length = 203401 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 343 gaggacaagaagtactaccccaccgccgaggaggt 377 |||||||||||||||||||| || ||||||||||| Sbjct: 60996 gaggacaagaagtactacccaacagccgaggaggt 60962
>dbj|D21163.1|HUMORFDA Homo sapiens KIAA0031 mRNA, partial cds Length = 3784 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggt 377 |||||||||||||||||||| || ||||||||||| Sbjct: 241 gaggacaagaagtactacccaacagccgaggaggt 275
>dbj|AK194696.1| Mus musculus cDNA, clone:Y1G0116C20, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000021306, based on BLAT search Length = 236 Score = 52.0 bits (26), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 343 gaggacaagaagtactaccccaccgccgaggaggtctacgg 383 ||||||||||||||||||||| | |||||||||| ||||| Sbjct: 23 gaggacaagaagtactaccccgcgnccgaggaggtgtacgg 63
>emb|BX041711.1|CNS094CJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC13BC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 962 Score = 46.1 bits (23), Expect = 0.095 Identities = 29/31 (93%) Strand = Plus / Plus Query: 130 tacgacgagttcggcaactacatcggcccgg 160 ||||||||||| |||||||||||||| |||| Sbjct: 87 tacgacgagtttggcaactacatcgggccgg 117
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 327 cgccgtcgtcctcgccgaggaca 349 ||||||||||||||||||||||| Sbjct: 58017 cgccgtcgtcctcgccgaggaca 57995
>ref|XM_470598.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 462 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 296 acgacgacgactacgccgacgccgcc 321 ||||||||||| |||||||||||||| Sbjct: 136 acgacgacgacgacgccgacgccgcc 111
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 acgacgacgactacgccgacgccgcc 321 ||||||||||| |||||||||||||| Sbjct: 6743455 acgacgacgacgacgccgacgccgcc 6743480 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 294 cgacgacgacgactacgccgacgcc 318 ||||||||||||| ||||||||||| Sbjct: 34723259 cgacgacgacgacgacgccgacgcc 34723283 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| |||||| ||||||| Sbjct: 26526871 cgacgacgacgacgacgccgccgccgcc 26526844 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaacgccgtcgtcctcgccg 343 |||||||||||||||||||| Sbjct: 13533764 gaacgccgtcgtcctcgccg 13533745 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaacgccgtcgtcctcgccg 343 |||||||||||||||||||| Sbjct: 13481900 gaacgccgtcgtcctcgccg 13481919
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 327 cgccgtcgtcctcgccgaggac 348 |||||||||||||||||||||| Sbjct: 48233 cgccgtcgtcctcgccgaggac 48212
>gb|AC099732.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1203D03, complete sequence Length = 82352 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 296 acgacgacgactacgccgacgccgcc 321 ||||||||||| |||||||||||||| Sbjct: 81290 acgacgacgacgacgccgacgccgcc 81265
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 296 acgacgacgactacgccgacgccgcc 321 ||||||||||| |||||||||||||| Sbjct: 6742668 acgacgacgacgacgccgacgccgcc 6742693 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 294 cgacgacgacgactacgccgacgcc 318 ||||||||||||| ||||||||||| Sbjct: 34813331 cgacgacgacgacgacgccgacgcc 34813355 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| |||||| ||||||| Sbjct: 26618194 cgacgacgacgacgacgccgccgccgcc 26618167 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaacgccgtcgtcctcgccg 343 |||||||||||||||||||| Sbjct: 13529639 gaacgccgtcgtcctcgccg 13529620 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaacgccgtcgtcctcgccg 343 |||||||||||||||||||| Sbjct: 13477775 gaacgccgtcgtcctcgccg 13477794
>gb|AC084682.1|CBRG47O06 Caenorhabditis briggsae cosmid G47O06, complete sequence Length = 41469 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 130 tacgacgagttcggcaactacatcgg 155 |||||||||||||| ||||||||||| Sbjct: 9655 tacgacgagttcggtaactacatcgg 9680
>ref|XM_465010.1| Oryza sativa (japonica cultivar-group), mRNA Length = 927 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgccc 322 ||||||||||||| |||||| |||||||| Sbjct: 81 cgacgacgacgacgacgccgccgccgccc 53
>ref|XM_463987.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1224 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 atggacgtcgacgacgacgac 306 ||||||||||||||||||||| Sbjct: 1 atggacgtcgacgacgacgac 21
>ref|XM_450789.1| Oryza sativa (japonica cultivar-group), mRNA Length = 261 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 289 gacgtcgacgacgacgactacgccgacgccgcc 321 |||| |||||||||||||| ||||| ||||||| Sbjct: 98 gacgacgacgacgacgactccgccgccgccgcc 66
>ref|NM_196632.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0019M20.4), mRNA Length = 486 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgccgacgccgcc 321 |||| ||||||||||||| |||| ||||||||| Sbjct: 175 gacgacgacgacgacgacgacgcagacgccgcc 207
>ref|XM_470316.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1785 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 294 cgacgacgacgactacgccgacgcc 318 ||||||||||||| ||||||||||| Sbjct: 923 cgacgacgacgacgacgccgacgcc 947
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09, complete sequence Length = 155525 Score = 42.1 bits (21), Expect = 1.5 Identities = 38/43 (88%), Gaps = 3/43 (6%) Strand = Plus / Plus Query: 291 cgtcgacgacgacgactacg---ccgacgccgcccagaacgcc 330 ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 65636 cgtcgacgacgacgactccgcccccgacgccgcccagcacgcc 65678
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 296 acgacgacgactacgccgacg 316 ||||||||||||||||||||| Sbjct: 2312398 acgacgacgactacgccgacg 2312378
>gb|AC137622.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0118N20, complete sequence Length = 146139 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 ccgcctccctcctcttccctc 33 ||||||||||||||||||||| Sbjct: 31675 ccgcctccctcctcttccctc 31695
>gb|AC130724.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0409G01, complete sequence Length = 143263 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 ccgcctccctcctcttccctc 33 ||||||||||||||||||||| Sbjct: 136662 ccgcctccctcctcttccctc 136682
>gb|AC106017.11| Homo sapiens chromosome 17, clone RP11-744A16, complete sequence Length = 178625 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 cctcccccgcctccttccggc 71 ||||||||||||||||||||| Sbjct: 105495 cctcccccgcctccttccggc 105515 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cctcccccgcctccttccggc 71 ||||||||||||||||||||| Sbjct: 52532 cctcccccgcctccttccggc 52512
>gb|AC134439.4| Mus musculus BAC clone RP24-494I18 from chromosome 13, complete sequence Length = 133093 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 16 cctccctcctcttccctctcacccc 40 |||||||||||||||||||| |||| Sbjct: 73657 cctccctcctcttccctctctcccc 73681
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgcc 318 ||||||||||||| ||||||||||| Sbjct: 139391 cgacgacgacgacgacgccgacgcc 139367
>ref|XM_503223.1| Yarrowia lipolytica CLIB122, YALI0D24233g predicted mRNA Length = 3438 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 293 tcgacgacgacgactacgccgacgc 317 |||||||||||||| |||||||||| Sbjct: 764 tcgacgacgacgacgacgccgacgc 788
>emb|AL109757.14|HSJ636F13 Human DNA sequence from clone RP4-636F13 on chromosome 1p36.13-36.23 Contains part of the VPS13D gene for vacuolar protein sorting 13D (yeast), complete sequence Length = 54746 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 cctccctcctcttccctctca 36 ||||||||||||||||||||| Sbjct: 43020 cctccctcctcttccctctca 43000
>emb|AJ618973.1| Drosophila pseudoobscura mRNA for putative dimer odorant-binding protein OBP17284 (OBP17284 gene) Length = 918 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgccgacgccgcc 321 |||| ||||||||||||| ||| |||||||||| Sbjct: 241 gacgacgacgacgacgacgacgacgacgccgcc 273 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgccgacgccgc 320 |||| ||||||||||||| |||||| |||||| Sbjct: 247 gacgacgacgacgacgacgacgccgccgccgc 278
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 291 cgtcgacgacgacgactacgccgacgccg 319 |||||||||||||||| |||||| ||||| Sbjct: 102022 cgtcgacgacgacgacgacgccgccgccg 101994
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgccgacgccgcc 321 |||| ||||||||||||| |||| ||||||||| Sbjct: 35558 gacgacgacgacgacgacgacgcagacgccgcc 35590
>gb|AC144506.1| Homo sapiens chromosome 17, clone XXfos-800635C12, complete sequence Length = 36963 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cctcccccgcctccttccggc 71 ||||||||||||||||||||| Sbjct: 29741 cctcccccgcctccttccggc 29721
>gb|AC139077.2| Homo sapiens chromosome 17, clone XXfos-88899C12, complete sequence Length = 37411 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cctcccccgcctccttccggc 71 ||||||||||||||||||||| Sbjct: 28146 cctcccccgcctccttccggc 28126
>gb|AC139138.2| Homo sapiens chromosome 17, clone XXfos-82524G9, complete sequence Length = 41839 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cctcccccgcctccttccggc 71 ||||||||||||||||||||| Sbjct: 15213 cctcccccgcctccttccggc 15193
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgccgacgccgcc 321 |||| ||||||||||||| |||| ||||||||| Sbjct: 14855780 gacgacgacgacgacgacgacgcagacgccgcc 14855812 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| ||||||| |||||| Sbjct: 21593666 cgacgacgacgacgacgccgaagccgcc 21593639
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 289 gacgtcgacgacgacgactacgccgacgccgcc 321 |||| |||||||||||||| ||||| ||||||| Sbjct: 12770107 gacgacgacgacgacgactccgccgccgccgcc 12770075
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 38/43 (88%), Gaps = 3/43 (6%) Strand = Plus / Plus Query: 291 cgtcgacgacgacgactacg---ccgacgccgcccagaacgcc 330 ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 24551454 cgtcgacgacgacgactccgcccccgacgccgcccagcacgcc 24551496 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 ccgcctccctcctcttccctc 33 ||||||||||||||||||||| Sbjct: 13765603 ccgcctccctcctcttccctc 13765623 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 291 cgtcgacgacgacgactacgccgacgccg 319 |||||||||||||||| |||||| ||||| Sbjct: 4734017 cgtcgacgacgacgacgacgccgccgccg 4733989 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| |||||| ||||||| Sbjct: 21288481 cgacgacgacgacgacgccgccgccgcc 21288454 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 cgacgacgacgactacgccgacgc 317 ||||||||||||| |||||||||| Sbjct: 19364562 cgacgacgacgacgacgccgacgc 19364585 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 675644 cggcgctcgccgactccgac 675625
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 293 tcgacgacgacgactacgccgacgccgcc 321 |||||||||||||| ||| |||||||||| Sbjct: 34241849 tcgacgacgacgacgacgacgacgccgcc 34241821 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 cgacgacgacgactacgccgacgccgccc 322 ||||||||||||| |||||| |||||||| Sbjct: 10900863 cgacgacgacgacgacgccgccgccgccc 10900891 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 atggacgtcgacgacgacgac 306 ||||||||||||||||||||| Sbjct: 1524951 atggacgtcgacgacgacgac 1524971 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 31433589 cggcgctcgccgactccgac 31433570
>gb|AC007952.15| Homo sapiens chromosome 17, clone RP11-160E2, complete sequence Length = 158103 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cctcccccgcctccttccggc 71 ||||||||||||||||||||| Sbjct: 142889 cctcccccgcctccttccggc 142869 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 cctcccccgcctccttccggc 71 ||||||||||||||||||||| Sbjct: 69674 cctcccccgcctccttccggc 69694
>dbj|AB066263.1| Thauera sp. DNT-1 genes for BssD, BssC, BssA, BssB, BssE, complete cds Length = 6551 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 acgacgacgactacgccgacg 316 ||||||||||||||||||||| Sbjct: 3472 acgacgacgactacgccgacg 3492
>gb|AY186999.1| Drosophila virilis unc-5 (unc-5) gene, partial cds; and ap (ap), vlc (vlc), CG17337 (CG17337), and CG13533 (CG13533) genes, complete cds Length = 83253 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 287 tggacgtcgacgacgacgactacgccgacgccg 319 |||||| ||||||||||||| ||| |||||||| Sbjct: 10285 tggacgacgacgacgacgacgacgacgacgccg 10317 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgccgacg 316 |||| ||||||||||||| ||||||||| Sbjct: 10293 gacgacgacgacgacgacgacgccgacg 10320
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 293 tcgacgacgacgactacgccgacgccgcc 321 |||||||||||||| ||| |||||||||| Sbjct: 77122 tcgacgacgacgacgacgacgacgccgcc 77094
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0027G10 Length = 184759 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 289 gacgtcgacgacgacgactacgccgacgccgcc 321 |||| |||||||||||||| ||||| ||||||| Sbjct: 77884 gacgacgacgacgacgactccgccgccgccgcc 77852
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 cgacgacgacgactacgccgacgccgccc 322 ||||||||||||| |||||| |||||||| Sbjct: 107062 cgacgacgacgacgacgccgccgccgccc 107090
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08 Length = 135314 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 atggacgtcgacgacgacgac 306 ||||||||||||||||||||| Sbjct: 88372 atggacgtcgacgacgacgac 88392
>dbj|AK119356.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-F12, full insert sequence Length = 2967 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgcc 318 ||||||||||||| ||||||||||| Sbjct: 246 cgacgacgacgacgacgccgacgcc 222
>dbj|AK110068.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-E05, full insert sequence Length = 3250 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 atggacgtcgacgacgacgac 306 ||||||||||||||||||||| Sbjct: 1589 atggacgtcgacgacgacgac 1609
>dbj|AK109880.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-C11, full insert sequence Length = 2064 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 294 cgacgacgacgactacgccgacgcc 318 ||||||||||||| ||||||||||| Sbjct: 960 cgacgacgacgacgacgccgacgcc 984
>dbj|AK100941.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138C14, full insert sequence Length = 1679 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 293 tcgacgacgacgactacgccgacgccgcc 321 |||||||||||||| ||| |||||||||| Sbjct: 121 tcgacgacgacgacgacgacgacgccgcc 93
>dbj|AK060312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C02, full insert sequence Length = 1118 Score = 42.1 bits (21), Expect = 1.5 Identities = 38/43 (88%), Gaps = 3/43 (6%) Strand = Plus / Plus Query: 291 cgtcgacgacgacgactacg---ccgacgccgcccagaacgcc 330 ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 420 cgtcgacgacgacgactccgcccccgacgccgcccagcacgcc 462
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 318 cgcccagaacgccgtcgtcctcgcc 342 ||||||||||||| ||||||||||| Sbjct: 1059692 cgcccagaacgccttcgtcctcgcc 1059668
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgccgacgccgcc 321 |||| ||||||||||||| |||| ||||||||| Sbjct: 14864021 gacgacgacgacgacgacgacgcagacgccgcc 14864053 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| ||||||| |||||| Sbjct: 21605329 cgacgacgacgacgacgccgaagccgcc 21605302
>gb|AC147108.3| Mus musculus BAC clone RP24-70D19 from 13, complete sequence Length = 188893 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 16 cctccctcctcttccctctcacccc 40 |||||||||||||||||||| |||| Sbjct: 4849 cctccctcctcttccctctctcccc 4873
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 tcgacgacgacgactacgccgacgc 317 |||||||||||||| |||||||||| Sbjct: 3202063 tcgacgacgacgacgacgccgacgc 3202039
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 291 cgtcgacgacgacgactacgccgacgccg 319 |||||||||||||||| |||||| ||||| Sbjct: 6425 cgtcgacgacgacgacgacgccgccgccg 6397
>gb|AC115871.8| Mus musculus chromosome 5, clone RP24-343A12, complete sequence Length = 175928 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 cctccctcctcttccctctc 35 |||||||||||||||||||| Sbjct: 84968 cctccctcctcttccctctc 84949
>ref|NM_188605.1| Oryza sativa (japonica cultivar-group), Ozsa8208 predicted mRNA Length = 996 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 cgccgcccagaacgccgtcg 334 |||||||||||||||||||| Sbjct: 903 cgccgcccagaacgccgtcg 922
>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05, complete sequence Length = 109126 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| |||||| ||||||| Sbjct: 75087 cgacgacgacgacgacgccgccgccgcc 75060
>ref|XM_481064.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1800 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaacgccgtcgtcctcgccg 343 |||||||||||||||||||| Sbjct: 645 gaacgccgtcgtcctcgccg 664
>ref|XM_475308.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 744 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| |||||| ||||||| Sbjct: 51 cgacgacgacgacgacgccgccgccgcc 24
>ref|NM_197744.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0042H09.3), mRNA Length = 1331 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| ||||||| |||||| Sbjct: 477 cgacgacgacgacgacgccgaagccgcc 504
>ref|NM_183778.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1416 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| ||| |||||||||| Sbjct: 399 cgacgacgacgacgacgacgacgccgcc 372
>ref|NM_189998.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1449 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgcc 312 |||| ||||||||||||||||||| Sbjct: 262 gacgacgacgacgacgactacgcc 285
>ref|XM_469284.1| Oryza sativa (japonica cultivar-group), mRNA Length = 921 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| |||||| ||||||| Sbjct: 219 cgacgacgacgacgacgccgccgccgcc 246
>ref|XM_475077.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 576 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 32 cggcgctcgccgactccgac 13
>gb|AY023324.1| Oryza sativa microsatellite MRG5649 containing (GTC)X8, closest to marker S1046, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 gacgtcgacgacgacgactacgcc 312 |||| ||||||||||||||||||| Sbjct: 118 gacgacgacgacgacgactacgcc 95
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 65211 cggcgctcgccgactccgac 65230
>gb|AC161235.6| Mus musculus chromosome 3, clone RP24-86C19, complete sequence Length = 206729 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 cctccctcctcttccctctc 35 |||||||||||||||||||| Sbjct: 152009 cctccctcctcttccctctc 152028
>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 cgacgacgacgactacgccgacgc 317 ||||||||||||| |||||||||| Sbjct: 67911 cgacgacgacgacgacgccgacgc 67934
>ref|XM_883073.1| PREDICTED: Bos taurus similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b, transcript variant 3 (LOC507895), mRNA Length = 1475 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 cctccctcctcttccctctc 35 |||||||||||||||||||| Sbjct: 956 cctccctcctcttccctctc 975
>gb|AC132119.2| Mus musculus BAC clone RP23-467E2 from chromosome 6, complete sequence Length = 161817 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 cctccctcctcttccctctc 35 |||||||||||||||||||| Sbjct: 103134 cctccctcctcttccctctc 103153
>gb|BC033873.1| Homo sapiens bone marrow stromal cell antigen 2, mRNA (cDNA clone MGC:45144 IMAGE:5217945), complete cds Length = 1103 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ggacaagaagtactacccca 364 |||||||||||||||||||| Sbjct: 528 ggacaagaagtactacccca 547
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 cgggcgtcgaggcgctcgtc 405 |||||||||||||||||||| Sbjct: 2223438 cgggcgtcgaggcgctcgtc 2223457
>gb|AC134930.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0042J17, complete sequence Length = 124139 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| |||||| ||||||| Sbjct: 5803 cgacgacgacgacgacgccgccgccgcc 5776
>gb|AC137073.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0005A11, from chromosome 3, complete sequence Length = 168219 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gaacgccgtcgtcctcgccg 343 |||||||||||||||||||| Sbjct: 93655 gaacgccgtcgtcctcgccg 93636 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaacgccgtcgtcctcgccg 343 |||||||||||||||||||| Sbjct: 41791 gaacgccgtcgtcctcgccg 41810
>ref|XM_812482.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511511.70) partial mRNA Length = 4467 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaacgccgtcgtcctcgccg 343 |||||||||||||||||||| Sbjct: 1075 gaacgccgtcgtcctcgccg 1094
>ref|XM_813984.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506941.70) partial mRNA Length = 4467 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaacgccgtcgtcctcgccg 343 |||||||||||||||||||| Sbjct: 1075 gaacgccgtcgtcctcgccg 1094
>gb|AE014306.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 3 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ctcctcttccctctcacccc 40 |||||||||||||||||||| Sbjct: 155656 ctcctcttccctctcacccc 155637
>gb|AC116178.4| Mus musculus BAC clone RP23-28O18 from 14, complete sequence Length = 195306 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 cctccctcctcttccctctc 35 |||||||||||||||||||| Sbjct: 73468 cctccctcctcttccctctc 73449
>ref|XM_547485.2| PREDICTED: Canis familiaris similar to liver-specific bHLH-Zip transcription factor (LOC490364), mRNA Length = 2223 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgccgacg 316 |||| |||||||||||||| |||||||| Sbjct: 1696 gacgacgacgacgacgactccgccgacg 1723
>ref|NM_004335.2| Homo sapiens bone marrow stromal cell antigen 2 (BST2), mRNA Length = 983 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ggacaagaagtactacccca 364 |||||||||||||||||||| Sbjct: 456 ggacaagaagtactacccca 475
>emb|AL445226.9| Human DNA sequence from clone RP11-261F2 on chromosome 13, complete sequence Length = 56239 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ctcctcttccctctcacccc 40 |||||||||||||||||||| Sbjct: 12559 ctcctcttccctctcacccc 12540
>gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, complete sequence Length = 197616 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 ctgtaccgcctccctcctcttccc 31 ||||||| |||||||||||||||| Sbjct: 161859 ctgtaccccctccctcctcttccc 161882
>gb|AF276759.4| Homo sapiens chromosome 8 clone RP11-420F14 map p21-p11, complete sequence Length = 213611 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 ctgtaccgcctccctcctcttccc 31 ||||||| |||||||||||||||| Sbjct: 111174 ctgtaccccctccctcctcttccc 111197
>emb|AJ969057.1| Zea Mays mRNA for glycosyltransferase (pglcat7 gene) Length = 1251 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gccgtcgtcctcgccgagga 347 |||||||||||||||||||| Sbjct: 894 gccgtcgtcctcgccgagga 875
>emb|BX069180.1|CNS09PJK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC53CH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 873 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgccgacgccgcccag 324 |||| |||||||||||||||| ||||| ||||||| Sbjct: 148 gacgacgacgacgacgactactacgacgacgcccag 183
>emb|BX068589.1|CNS09P35 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC52DF11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 968 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgccgacgccgcccag 324 |||| |||||||||||||||| ||||| ||||||| Sbjct: 128 gacgacgacgacgacgactactacgacgacgcccag 163
>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome Length = 154746 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 295 gacgacgacgactacgccgacgccgccc 322 |||||||||||| ||| ||||||||||| Sbjct: 150484 gacgacgacgacgacgacgacgccgccc 150511 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 295 gacgacgacgactacgccgacgccgccc 322 |||||||||||| ||| ||||||||||| Sbjct: 131258 gacgacgacgacgacgacgacgccgccc 131231
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 cgggcgtcgaggcgctcgtc 405 |||||||||||||||||||| Sbjct: 384706 cgggcgtcgaggcgctcgtc 384725
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 121321 cggcgctcgccgactccgac 121340
>emb|AL645609.21| Mouse DNA sequence from clone RP23-432O10 on chromosome 11 Contains the 5' end of the Spred2 gene for sprouty protein with EVH-1 domain 2, related sequence and two CpG islands, complete sequence Length = 121493 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 cctccctcctcttccctctc 35 |||||||||||||||||||| Sbjct: 34200 cctccctcctcttccctctc 34181
>gb|AC157588.8| Mus musculus BAC clone RP24-95J4 from chromosome 5, complete sequence Length = 220137 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cctcctcttccctctcaccc 39 |||||||||||||||||||| Sbjct: 98713 cctcctcttccctctcaccc 98694
>gb|AC010319.10| Homo sapiens chromosome 19 clone CTD-2521M24, complete sequence Length = 141370 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ggacaagaagtactacccca 364 |||||||||||||||||||| Sbjct: 87797 ggacaagaagtactacccca 87816
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 ggcgctcgccgactccgacgccga 182 ||||||||||||| |||||||||| Sbjct: 2598716 ggcgctcgccgacaccgacgccga 2598739
>emb|CR609450.1| full-length cDNA clone CS0DI007YO24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 962 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ggacaagaagtactacccca 364 |||||||||||||||||||| Sbjct: 465 ggacaagaagtactacccca 484
>emb|CR591045.1| full-length cDNA clone CS0DL006YF17 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 997 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ggacaagaagtactacccca 364 |||||||||||||||||||| Sbjct: 498 ggacaagaagtactacccca 517
>dbj|AP001204.1| Rhodococcus equi plasmid pREAT701 DNA, complete sequence Length = 80610 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 gacgacgacgactacgccga 314 |||||||||||||||||||| Sbjct: 47949 gacgacgacgactacgccga 47930
>dbj|AB239767.1| Streptomyces sp. AJ9463 chi65S, chi65R, chi65 genes for sensor-histidine kinase, response-regulator protein, chitinase, complete cds Length = 5722 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 293 tcgacgacgacgactacgccgacgccgcccag 324 |||||| || ||||||||||| |||||||||| Sbjct: 5161 tcgacgccgccgactacgccggcgccgcccag 5192
>gb|AC022387.8| Homo sapiens chromosome 10 clone RP11-111N20, complete sequence Length = 185819 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 tccctcctcttccctctcacccca 41 |||||||||||||||||| ||||| Sbjct: 45949 tccctcctcttccctctctcccca 45972
>gb|AF268097.1| Ustilago maydis TPR-containing protein Mql1 (mql1) gene, complete cds Length = 6627 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttgtgctgtaccgcctccct 22 |||||||||||||||||||| Sbjct: 1068 ttgtgctgtaccgcctccct 1087
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete sequence Length = 144191 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| ||||||| |||||| Sbjct: 16391 cgacgacgacgacgacgccgaagccgcc 16418
>gb|AC108172.1| Homo sapiens chromosome 5 clone RP11-171P23, complete sequence Length = 190619 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tccctctcaccccaaatccc 47 |||||||||||||||||||| Sbjct: 71997 tccctctcaccccaaatccc 71978
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| ||||||| |||||| Sbjct: 25570 cgacgacgacgacgacgccgaagccgcc 25543
>gb|AC127346.4| Mus musculus BAC clone RP23-54F4 from chromosome 6, complete sequence Length = 203187 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ctcctcttccctctcacccc 40 |||||||||||||||||||| Sbjct: 86477 ctcctcttccctctcacccc 86458
>gb|AC034226.6| Homo sapiens chromosome 5 clone CTD-2130F23, complete sequence Length = 148046 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tccctctcaccccaaatccc 47 |||||||||||||||||||| Sbjct: 121384 tccctctcaccccaaatccc 121365
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cgggcgtcgaggcgctcgtc 405 |||||||||||||||||||| Sbjct: 1603393 cgggcgtcgaggcgctcgtc 1603374
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 23956348 cggcgctcgccgactccgac 23956367
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 3349083 cggcgctcgccgactccgac 3349064
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 26153642 cggcgctcgccgactccgac 26153623 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaacgccgtcgtcctcgccg 343 |||||||||||||||||||| Sbjct: 9562037 gaacgccgtcgtcctcgccg 9562056 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ccgactccgacgccgatgac 186 |||||||||||||||||||| Sbjct: 6568425 ccgactccgacgccgatgac 6568444 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ccgactccgacgccgatgac 186 |||||||||||||||||||| Sbjct: 6491442 ccgactccgacgccgatgac 6491461
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 gacgtcgacgacgacgactacgcc 312 |||| ||||||||||||||||||| Sbjct: 40722514 gacgacgacgacgacgactacgcc 40722491 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 35990047 cggcgctcgccgactccgac 35990028 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 30933964 cggcgctcgccgactccgac 30933983 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| ||| |||||||||| Sbjct: 12215350 cgacgacgacgacgacgacgacgccgcc 12215323 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 cgccgcccagaacgccgtcg 334 |||||||||||||||||||| Sbjct: 7184576 cgccgcccagaacgccgtcg 7184557
>ref|NM_001011629.1| Apis mellifera putative transcription factor mblk-1 (Mblk-1), mRNA Length = 14440 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgccgacg 316 |||| ||||||||||||||||| ||||| Sbjct: 574 gacgacgacgacgacgactacgacgacg 601 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgccgacg 316 |||||||||||||||||| ||| ||||| Sbjct: 93 gacgtcgacgacgacgacgacgacgacg 120
>gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 genomic sequence, complete sequence Length = 136712 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| |||||| ||||||| Sbjct: 49685 cgacgacgacgacgacgccgccgccgcc 49658
>gb|AF116907.2|AF116907 Rhodococcus equi virulence plasmid, complete sequence Length = 80609 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 gacgacgacgactacgccga 314 |||||||||||||||||||| Sbjct: 47948 gacgacgacgactacgccga 47929
>dbj|AK223124.1| Homo sapiens mRNA for bone marrow stromal cell antigen 2 variant, clone: KAT11101 Length = 911 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ggacaagaagtactacccca 364 |||||||||||||||||||| Sbjct: 466 ggacaagaagtactacccca 485
>gb|AC156938.3| Mus musculus BAC clone RP23-314M12 from chromosome 14, complete sequence Length = 207534 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 cctccctcctcttccctctc 35 |||||||||||||||||||| Sbjct: 200815 cctccctcctcttccctctc 200796
>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0052O12 Length = 167881 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 gacgtcgacgacgacgactacgcc 312 |||| ||||||||||||||||||| Sbjct: 25160 gacgacgacgacgacgactacgcc 25137
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 cgccgcccagaacgccgtcg 334 |||||||||||||||||||| Sbjct: 79224 cgccgcccagaacgccgtcg 79205
>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0638D12 Length = 161277 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 134331 cggcgctcgccgactccgac 134350
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cccggcgctcgccgactccg 175 |||||||||||||||||||| Sbjct: 5917171 cccggcgctcgccgactccg 5917190
>gb|AC026956.20| Homo sapiens chromosome 15, clone RP11-597K23, complete sequence Length = 215520 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 cctccctcctcttccctctc 35 |||||||||||||||||||| Sbjct: 116187 cctccctcctcttccctctc 116206
>gb|AC136967.1| Papio anubis clone RP41-30N22, complete sequence Length = 194730 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tcaccccaaatcccaaacct 53 |||||||||||||||||||| Sbjct: 13827 tcaccccaaatcccaaacct 13808
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 2772 cggcgctcgccgactccgac 2753
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D11 Length = 138108 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 88725 cggcgctcgccgactccgac 88706
>dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0024K03 Length = 119796 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 116163 cggcgctcgccgactccgac 116144
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 caccgccgaggaggtctacg 382 |||||||||||||||||||| Sbjct: 2621677 caccgccgaggaggtctacg 2621696
>dbj|AP002953.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0426D06 Length = 162173 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| ||| |||||||||| Sbjct: 39976 cgacgacgacgacgacgacgacgccgcc 39949
>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078N11 Length = 155168 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 68986 cggcgctcgccgactccgac 68967
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1191_A10 Length = 140643 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 97573 cggcgctcgccgactccgac 97554
>dbj|AP005494.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086M15 Length = 153491 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ccgactccgacgccgatgac 186 |||||||||||||||||||| Sbjct: 149900 ccgactccgacgccgatgac 149919 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ccgactccgacgccgatgac 186 |||||||||||||||||||| Sbjct: 72917 ccgactccgacgccgatgac 72936
>dbj|AP005488.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0003D23 Length = 151604 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ccgactccgacgccgatgac 186 |||||||||||||||||||| Sbjct: 1772 ccgactccgacgccgatgac 1791
>dbj|AK120714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002A11, full insert sequence Length = 2214 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgcc 312 |||| ||||||||||||||||||| Sbjct: 354 gacgacgacgacgacgactacgcc 377
>dbj|AK120656.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158B06, full insert sequence Length = 2150 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgccgcc 321 ||||||||||||| |||||| ||||||| Sbjct: 273 cgacgacgacgacgacgccgccgccgcc 246
>dbj|AP005157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0005L24 Length = 155365 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaacgccgtcgtcctcgccg 343 |||||||||||||||||||| Sbjct: 92067 gaacgccgtcgtcctcgccg 92086
>dbj|AK109635.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-D08, full insert sequence Length = 2261 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 843 cggcgctcgccgactccgac 824
>ref|XM_310558.2| Anopheles gambiae str. PEST ENSANGP00000017328 (ENSANGG00000014839), partial mRNA Length = 993 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgccgacgccgcccag 324 |||| |||||||||||||||| ||||| ||||||| Sbjct: 153 gacgacgacgacgacgactactacgacgacgcccag 188
>dbj|AK070494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048M13, full insert sequence Length = 1305 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 1017 cggcgctcgccgactccgac 1036
>dbj|AK067179.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097F03, full insert sequence Length = 1272 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgc 317 ||||||||||||| |||||||||| Sbjct: 191 cgacgacgacgacgacgccgacgc 168
>dbj|AK058790.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F03, full insert sequence Length = 1133 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 cgacgacgacgactacgccgacgc 317 ||||||||||||| |||||||||| Sbjct: 156 cgacgacgacgacgacgccgacgc 133
>gb|AC104908.10| Mus musculus chromosome 3, clone RP23-325M18, complete sequence Length = 231792 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 cctccctcctcttccctctc 35 |||||||||||||||||||| Sbjct: 188264 cctccctcctcttccctctc 188245
>dbj|D28137.1|HUMBST2 Homo sapiens mRNA for BST-2, complete cds Length = 996 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ggacaagaagtactacccca 364 |||||||||||||||||||| Sbjct: 456 ggacaagaagtactacccca 475
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ggcccgggcgtcgaggcgct 401 |||||||||||||||||||| Sbjct: 2949896 ggcccgggcgtcgaggcgct 2949915
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 3357788 cggcgctcgccgactccgac 3357769
>emb|AL731828.22| Mouse DNA sequence from clone RP23-50L5 on chromosome X, complete sequence Length = 228327 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 cctccctcctcttccctctc 35 |||||||||||||||||||| Sbjct: 111780 cctccctcctcttccctctc 111799 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 cctccctcctcttccctctc 35 |||||||||||||||||||| Sbjct: 111759 cctccctcctcttccctctc 111778
>emb|AL805923.6| Mouse DNA sequence from clone RP23-65B16 on chromosome 4, complete sequence Length = 182774 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 ctccctcctcttccctctcacccc 40 ||||||||||||||||||| |||| Sbjct: 125078 ctccctcctcttccctctcccccc 125055
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cggcgctcgccgactccgac 177 |||||||||||||||||||| Sbjct: 20843 cggcgctcgccgactccgac 20824
>emb|Z14974.1|DMCPO611G D.melanogaster Cpo 61.1 gene for couch potato protein Length = 4134 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 cgacgacgactacgccgacgccgc 320 |||||||||||||| ||||||||| Sbjct: 3861 cgacgacgactacgacgacgccgc 3884
>dbj|AB047034.1| Apis mellifera mblk-1 mRNA, complete cds Length = 14440 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgccgacg 316 |||| ||||||||||||||||| ||||| Sbjct: 574 gacgacgacgacgacgactacgacgacg 601 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 gacgtcgacgacgacgactacgccgacg 316 |||||||||||||||||| ||| ||||| Sbjct: 93 gacgtcgacgacgacgacgacgacgacg 120 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,023,896 Number of Sequences: 3902068 Number of extensions: 2023896 Number of successful extensions: 80989 Number of sequences better than 10.0: 185 Number of HSP's better than 10.0 without gapping: 201 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 76265 Number of HSP's gapped (non-prelim): 4610 length of query: 434 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 412 effective length of database: 17,147,199,772 effective search space: 7064646306064 effective search space used: 7064646306064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
