ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl56e08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK100311.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 3e-47
2ref|NM_187916.1| Oryza sativa (japonica cultivar-group), Ozsa835... 131 2e-27
3dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic D... 129 7e-27
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 129 7e-27
5dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic D... 72 1e-09
6gb|BC065817.1| Homo sapiens cDNA clone IMAGE:6186273, partial cds 48 0.019
7gb|AF193059.1|AF193059 Homo sapiens SP1224 mRNA, complete cds 48 0.019
8gb|AC074213.7| Homo sapiens BAC clone RP11-34K3 from 2, complete... 48 0.019
9ref|NM_130336.2| Arabidopsis thaliana ATP binding / ATP-dependen... 44 0.30
10ref|XM_483497.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.30
11ref|XM_483496.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.30
12ref|XM_450281.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.30
13ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predic... 44 0.30
14gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 ma... 44 0.30
15dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
16dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
17dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
18dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
19dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
20dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
21dbj|AK105272.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.30
22dbj|AK071880.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.30
23ref|XM_470408.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.2
24gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
25gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.2
27ref|XM_541741.2| PREDICTED: Canis familiaris similar to H1 histo... 42 1.2
28emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 42 1.2
29dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
30dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
31gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genom... 42 1.2
32gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genom... 42 1.2
33dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
34gb|AF500307.1| Guinea pig cytomegalovirus MIP-1-like protein gen... 42 1.2
35dbj|AK063498.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
36gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.2
37ref|NM_188233.1| Oryza sativa (japonica cultivar-group), predic... 40 4.7
38ref|XM_468012.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.7
39gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7
40gb|U51564.1|HCU51564 Human herpesvirus 5 UL105 (UL105) gene, com... 40 4.7
41gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome 40 4.7
42gb|AY486477.1|AY486470S08 Human herpesvirus 5 strain Toledo geno... 40 4.7
43ref|XM_983172.1| PREDICTED: Mus musculus hypothetical protein LO... 40 4.7
44ref|XM_980705.1| PREDICTED: Mus musculus hypothetical protein LO... 40 4.7
45gb|AC134837.3| Mus musculus BAC clone RP24-338L20 from chromosom... 40 4.7
46ref|XM_541817.2| PREDICTED: Canis familiaris similar to ataxin 7... 40 4.7
47ref|XM_843193.1| PREDICTED: Canis familiaris similar to ataxin 7... 40 4.7
48gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete s... 40 4.7
49gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete seq... 40 4.7
50gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequ... 40 4.7
51gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete ... 40 4.7
52gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequ... 40 4.7
53gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete s... 40 4.7
54gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome 40 4.7
55ref|XM_862875.1| PREDICTED: Canis familiaris similar to Midasin ... 40 4.7
56ref|XM_532232.2| PREDICTED: Canis familiaris similar to Midasin ... 40 4.7
57gb|AC131691.4| Mus musculus BAC clone RP23-388P2 from chromosome... 40 4.7
58gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome 40 4.7
59gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 4.7
60gb|AY186194.1| Rhesus cytomegalovirus strain 68-1, complete genome 40 4.7
61emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complet... 40 4.7
62gb|DQ120516.1| Cercopithecine herpesvirus 8 isolate CMV 180.92, ... 40 4.7
63gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome 40 4.7
64dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
65dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
66dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
67gb|AC006464.3| Homo sapiens BAC clone RP11-436C12 from 2, comple... 40 4.7
68dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
69dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
70dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
71dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
72dbj|AK066823.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.7
73dbj|AK064009.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.7
74gb|AF047524.1|AF047524 Human cytomegalovirus UL104 gene, complet... 40 4.7
75gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7 
>dbj|AK100311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078K23, full
           insert sequence
          Length = 3500

 Score =  196 bits (99), Expect = 3e-47
 Identities = 162/183 (88%)
 Strand = Plus / Plus

                                                                       
Query: 173 gatcgtcgacaaggtcaaggagaaccgcgtcacgctgatcgtgggggacaccggatgcgg 232
           |||||| || ||||| |||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 171 gatcgtggagaaggtgaaggggaaccgcgtcactctcatcgtgggggacaccggatgcgg 230

                                                                       
Query: 233 aaagagctctatggttccccagttcctcctagaaggaaatttggaaccaattatgtgcac 292
           |||||| ||||||||||| ||||||||||| |||| |||  ||||||| ||| | |||||
Sbjct: 231 aaagagttctatggttccacagttcctcctggaagaaaacatggaacccattctatgcac 290

                                                                       
Query: 293 acagccaaggaggtttgctgtagtagctattgctcaaatggtggccgaatctcgcaactg 352
            ||||||||||||||||| |||||||| |||||||||||| | |||||||||||||| ||
Sbjct: 291 gcagccaaggaggtttgcagtagtagccattgctcaaatgattgccgaatctcgcaattg 350

              
Query: 353 tca 355
           |||
Sbjct: 351 tca 353
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>ref|NM_187916.1| Oryza sativa (japonica cultivar-group), Ozsa8358 predicted mRNA
          Length = 3594

 Score =  131 bits (66), Expect = 2e-27
 Identities = 111/126 (88%)
 Strand = Plus / Plus

                                                                        
Query: 230  cggaaagagctctatggttccccagttcctcctagaaggaaatttggaaccaattatgtg 289
            ||||||||| ||||||||||| ||||||||||| |||| |||  ||||||| ||| | ||
Sbjct: 1042 cggaaagagttctatggttccacagttcctcctggaagaaaacatggaacccattctatg 1101

                                                                        
Query: 290  cacacagccaaggaggtttgctgtagtagctattgctcaaatggtggccgaatctcgcaa 349
            ||| ||||||||||||||||| |||||||| |||||||||||| | ||||||||||||||
Sbjct: 1102 cacgcagccaaggaggtttgcagtagtagccattgctcaaatgattgccgaatctcgcaa 1161

                  
Query: 350  ctgtca 355
             |||||
Sbjct: 1162 ttgtca 1167



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                      
Query: 173 gatcgtcgacaaggtcaaggagaaccgcgtcacgctgatcgtgggggacaccggatgcg 231
           |||||| || ||||| |||| |||||||||||| || ||||||||||||||||||||||
Sbjct: 936 gatcgtggagaaggtgaaggggaaccgcgtcactctcatcgtgggggacaccggatgcg 994
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>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0711E10
          Length = 157903

 Score =  129 bits (65), Expect = 7e-27
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                          
Query: 231    ggaaagagctctatggttccccagttcctcctagaaggaaatttggaaccaattatgtgc 290
              |||||||| ||||||||||| ||||||||||| |||| |||  ||||||| ||| | |||
Sbjct: 142725 ggaaagagttctatggttccacagttcctcctggaagaaaacatggaacccattctatgc 142666

                                                                          
Query: 291    acacagccaaggaggtttgctgtagtagctattgctcaaatggtggccgaatctcgcaac 350
              || ||||||||||||||||| |||||||| |||||||||||| | |||||||||||||| 
Sbjct: 142665 acgcagccaaggaggtttgcagtagtagccattgctcaaatgattgccgaatctcgcaat 142606

                   
Query: 351    tgtca 355
              |||||
Sbjct: 142605 tgtca 142601



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                          
Query: 173    gatcgtcgacaaggtcaaggagaaccgcgtcacgctgatcgtgggggacaccggatgcgg 232
              |||||| || ||||| |||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 143613 gatcgtggagaaggtgaaggggaaccgcgtcactctcatcgtgggggacaccggatgcgg 143554
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  129 bits (65), Expect = 7e-27
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                           
Query: 231     ggaaagagctctatggttccccagttcctcctagaaggaaatttggaaccaattatgtgc 290
               |||||||| ||||||||||| ||||||||||| |||| |||  ||||||| ||| | |||
Sbjct: 8567572 ggaaagagttctatggttccacagttcctcctggaagaaaacatggaacccattctatgc 8567513

                                                                           
Query: 291     acacagccaaggaggtttgctgtagtagctattgctcaaatggtggccgaatctcgcaac 350
               || ||||||||||||||||| |||||||| |||||||||||| | |||||||||||||| 
Sbjct: 8567512 acgcagccaaggaggtttgcagtagtagccattgctcaaatgattgccgaatctcgcaat 8567453

                    
Query: 351     tgtca 355
               |||||
Sbjct: 8567452 tgtca 8567448



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                           
Query: 173     gatcgtcgacaaggtcaaggagaaccgcgtcacgctgatcgtgggggacaccggatgcgg 232
               |||||| || ||||| |||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 8568460 gatcgtggagaaggtgaaggggaaccgcgtcactctcatcgtgggggacaccggatgcgg 8568401



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 122      ggcgccgcggcggtggcggccgccgg 147
                ||||||||||||| ||||||||||||
Sbjct: 26385629 ggcgccgcggcggcggcggccgccgg 26385604



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 123      gcgccgcggcggtggcggccg 143
                |||||||||||||||||||||
Sbjct: 10233639 gcgccgcggcggtggcggccg 10233619



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 122     ggcgccgcggcggtggcggc 141
               ||||||||||||||||||||
Sbjct: 5127634 ggcgccgcggcggtggcggc 5127615
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>dbj|AP002525.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           PAC clone:P0462H08
          Length = 139152

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 173 gatcgtcgacaaggtcaaggagaaccgcgtcacgctgatcgtgggggacaccggatgcgg 232
           |||||| || ||||| |||| |||||||||||| || |||||||||||||||||||||||
Sbjct: 655 gatcgtggagaaggtgaaggggaaccgcgtcactctcatcgtgggggacaccggatgcgg 596
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>gb|BC065817.1| Homo sapiens cDNA clone IMAGE:6186273, partial cds
          Length = 1900

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 119 ggaggcgccgcggcggtggcggcc 142
           ||||||||||||||||||||||||
Sbjct: 137 ggaggcgccgcggcggtggcggcc 114
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>gb|AF193059.1|AF193059 Homo sapiens SP1224 mRNA, complete cds
          Length = 2492

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 119 ggaggcgccgcggcggtggcggcc 142
           ||||||||||||||||||||||||
Sbjct: 159 ggaggcgccgcggcggtggcggcc 136
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>gb|AC074213.7| Homo sapiens BAC clone RP11-34K3 from 2, complete sequence
          Length = 176539

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 119    ggaggcgccgcggcggtggcggcc 142
              ||||||||||||||||||||||||
Sbjct: 171441 ggaggcgccgcggcggtggcggcc 171418
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>ref|NM_130336.2| Arabidopsis thaliana ATP binding / ATP-dependent helicase/
           helicase/ nucleic acid binding AT2G47680 mRNA, complete
           cds
          Length = 3082

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                       
Query: 286 tgtgcacacagccaaggaggtttgctgtagtagctattgctcaaatggtggccgaatctc 345
           |||| |||||||| ||||| ||||| || |||||| ||||| | ||||| ||  ||||||
Sbjct: 249 tgtgtacacagcctaggagatttgcggttgtagctgttgctaagatggttgctaaatctc 308

                 
Query: 346 gcaact 351
           ||||||
Sbjct: 309 gcaact 314
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>ref|XM_483497.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1719

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 123 gcgccgcggcggtggcggccgccggt 148
           |||||||||||| |||||||||||||
Sbjct: 96  gcgccgcggcggcggcggccgccggt 71
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>ref|XM_483496.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2194

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 123 gcgccgcggcggtggcggccgccggt 148
           |||||||||||| |||||||||||||
Sbjct: 101 gcgccgcggcggcggcggccgccggt 76
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>ref|XM_450281.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 813

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 116 ggcggaggcgccgcggcggtggcggc 141
           ||||| ||||||||||||||||||||
Sbjct: 390 ggcggcggcgccgcggcggtggcggc 415
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>ref|NM_192395.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1746

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 122 ggcgccgcggcggtggcggccgccgg 147
           ||||||||||||| ||||||||||||
Sbjct: 159 ggcgccgcggcggcggcggccgccgg 134
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>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete
             sequence
          Length = 106355

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 286   tgtgcacacagccaaggaggtttgctgtagtagctattgctcaaatggtggccgaatctc 345
             |||| |||||||| ||||| ||||| || |||||| ||||| | ||||| ||  ||||||
Sbjct: 17728 tgtgtacacagcctaggagatttgcggttgtagctgttgctaagatggttgctaaatctc 17669

                   
Query: 346   gcaact 351
             ||||||
Sbjct: 17668 gcaact 17663
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 116     ggcggaggcgccgcggcggtggcggc 141
               ||||| ||||||||||||||||||||
Sbjct: 3772675 ggcggcggcgccgcggcggtggcggc 3772700
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 123      gcgccgcggcggtggcggccgccggt 148
                |||||||||||| |||||||||||||
Sbjct: 26536078 gcgccgcggcggcggcggccgccggt 26536053
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>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0032K15
          Length = 126195

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 122   ggcgccgcggcggtggcggccgccgg 147
             ||||||||||||| ||||||||||||
Sbjct: 59494 ggcgccgcggcggcggcggccgccgg 59469
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>dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1080A02
          Length = 151360

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 116   ggcggaggcgccgcggcggtggcggc 141
             ||||| ||||||||||||||||||||
Sbjct: 12191 ggcggcggcgccgcggcggtggcggc 12216
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>dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1116_H10
          Length = 101054

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 116   ggcggaggcgccgcggcggtggcggc 141
             ||||| ||||||||||||||||||||
Sbjct: 79977 ggcggcggcgccgcggcggtggcggc 80002
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>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0702E04
          Length = 190948

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 123   gcgccgcggcggtggcggccgccggt 148
             |||||||||||| |||||||||||||
Sbjct: 84945 gcgccgcggcggcggcggccgccggt 84920
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>dbj|AK105272.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-H01, full
           insert sequence
          Length = 1718

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 123 gcgccgcggcggtggcggccgccggt 148
           |||||||||||| |||||||||||||
Sbjct: 96  gcgccgcggcggcggcggccgccggt 71
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>dbj|AK071880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043I23, full
           insert sequence
          Length = 2193

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 123 gcgccgcggcggtggcggccgccggt 148
           |||||||||||| |||||||||||||
Sbjct: 100 gcgccgcggcggcggcggccgccggt 75
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>ref|XM_470408.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1845

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 124 cgccgcggcggtggcggccgc 144
           |||||||||||||||||||||
Sbjct: 33  cgccgcggcggtggcggccgc 53
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>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06,
             complete sequence
          Length = 145323

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 124   cgccgcggcggtggcggccgc 144
             |||||||||||||||||||||
Sbjct: 71257 cgccgcggcggtggcggccgc 71277
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>gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0088F07, complete sequence
          Length = 139180

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 123   gcgccgcggcggtggcggccg 143
             |||||||||||||||||||||
Sbjct: 16086 gcgccgcggcggtggcggccg 16066
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 124      cgccgcggcggtggcggccgc 144
                |||||||||||||||||||||
Sbjct: 35363063 cgccgcggcggtggcggccgc 35363043
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>ref|XM_541741.2| PREDICTED: Canis familiaris similar to H1 histone family, member X
           (LOC484627), mRNA
          Length = 764

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 122 ggcgccgcggcggtggcggccgccg 146
           ||||||| |||||||||||||||||
Sbjct: 538 ggcgccggggcggtggcggccgccg 514
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 127     cgcggcggtggcggccgccgg 147
               |||||||||||||||||||||
Sbjct: 2005624 cgcggcggtggcggccgccgg 2005604
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 124      cgccgcggcggtggcggccgc 144
                |||||||||||||||||||||
Sbjct: 22227992 cgccgcggcggtggcggccgc 22228012



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 123      gcgccgcggcggtggcggccg 143
                |||||||||||||||||||||
Sbjct: 21135303 gcgccgcggcggtggcggccg 21135283
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 124      cgccgcggcggtggcggccgc 144
                |||||||||||||||||||||
Sbjct: 35453135 cgccgcggcggtggcggccgc 35453115
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>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence,
            complete sequence
          Length = 116443

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 124  cgccgcggcggtggcggccgc 144
            |||||||||||||||||||||
Sbjct: 5391 cgccgcggcggtggcggccgc 5411
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>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete
              sequence
          Length = 133846

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 124    cgccgcggcggtggcggccgc 144
              |||||||||||||||||||||
Sbjct: 124563 cgccgcggcggtggcggccgc 124583
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>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0498A12
          Length = 159749

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 123   gcgccgcggcggtggcggccg 143
             |||||||||||||||||||||
Sbjct: 98953 gcgccgcggcggtggcggccg 98933
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>gb|AF500307.1| Guinea pig cytomegalovirus MIP-1-like protein gene, complete cds
          Length = 1803

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 126  ccgcggcggtggcggccgccg 146
            |||||||||||||||||||||
Sbjct: 1400 ccgcggcggtggcggccgccg 1380
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>dbj|AK063498.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D07, full
           insert sequence
          Length = 903

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 124 cgccgcggcggtggcggccgc 144
           |||||||||||||||||||||
Sbjct: 522 cgccgcggcggtggcggccgc 542
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 126     ccgcggcggtggcggccgccg 146
               |||||||||||||||||||||
Sbjct: 4688859 ccgcggcggtggcggccgccg 4688839



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 123     gcgccgcggcggtggcggccg 143
               |||||||||||||||||||||
Sbjct: 2818156 gcgccgcggcggtggcggccg 2818136
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>ref|NM_188233.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 762

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 122 ggcgccgcggcggtggcggc 141
           ||||||||||||||||||||
Sbjct: 277 ggcgccgcggcggtggcggc 296
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>ref|XM_468012.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1188

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 cgagaaggcggaggcgccgc 129
           ||||||||||||||||||||
Sbjct: 385 cgagaaggcggaggcgccgc 404
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>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0073K23 map near R10571S, complete sequence
          Length = 161073

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 128  gcggcggtggcggccgccgg 147
            ||||||||||||||||||||
Sbjct: 9957 gcggcggtggcggccgccgg 9938
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>gb|U51564.1|HCU51564 Human herpesvirus 5 UL105 (UL105) gene, complete cds
          Length = 3362

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 ggatcgtcgacaaggtcaag 191
           ||||||||||||||||||||
Sbjct: 398 ggatcgtcgacaaggtcaag 417
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>gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome
          Length = 235645

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    ggatcgtcgacaaggtcaag 191
              ||||||||||||||||||||
Sbjct: 153327 ggatcgtcgacaaggtcaag 153346
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>gb|AY486477.1|AY486470S08 Human herpesvirus 5 strain Toledo genome, partial sequence
          Length = 24216

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   ggatcgtcgacaaggtcaag 191
             ||||||||||||||||||||
Sbjct: 21993 ggatcgtcgacaaggtcaag 22012
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>ref|XM_983172.1| PREDICTED: Mus musculus hypothetical protein LOC670767 (LOC670767),
           mRNA
          Length = 732

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 gccgcggcggtggcggccgc 144
           ||||||||||||||||||||
Sbjct: 183 gccgcggcggtggcggccgc 164
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>ref|XM_980705.1| PREDICTED: Mus musculus hypothetical protein LOC665982 (LOC665982),
           mRNA
          Length = 732

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 gccgcggcggtggcggccgc 144
           ||||||||||||||||||||
Sbjct: 183 gccgcggcggtggcggccgc 164
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>gb|AC134837.3| Mus musculus BAC clone RP24-338L20 from chromosome 16, complete sequence
          Length = 175319

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    gccgcggcggtggcggccgc 144
              ||||||||||||||||||||
Sbjct: 137125 gccgcggcggtggcggccgc 137106
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>ref|XM_541817.2| PREDICTED: Canis familiaris similar to ataxin 7, transcript variant
           1 (LOC484701), mRNA
          Length = 2787

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 118 cggaggcgccgcggcggtggcggc 141
           ||||||||||||||||| ||||||
Sbjct: 179 cggaggcgccgcggcggcggcggc 156
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>ref|XM_843193.1| PREDICTED: Canis familiaris similar to ataxin 7, transcript variant
           2 (LOC484701), mRNA
          Length = 2999

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 118 cggaggcgccgcggcggtggcggc 141
           ||||||||||||||||| ||||||
Sbjct: 179 cggaggcgccgcggcggcggcggc 156
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>gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete sequence
          Length = 233739

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   ggatcgtcgacaaggtcaag 191
             ||||||||||||||||||||
Sbjct: 68629 ggatcgtcgacaaggtcaag 68610
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>gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete sequence
          Length = 229209

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   ggatcgtcgacaaggtcaag 191
             ||||||||||||||||||||
Sbjct: 74877 ggatcgtcgacaaggtcaag 74858
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>gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequence
          Length = 234881

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    ggatcgtcgacaaggtcaag 191
              ||||||||||||||||||||
Sbjct: 189021 ggatcgtcgacaaggtcaag 189040
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>gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete sequence
          Length = 226889

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   ggatcgtcgacaaggtcaag 191
             ||||||||||||||||||||
Sbjct: 70313 ggatcgtcgacaaggtcaag 70294
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>gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequence
          Length = 229700

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   ggatcgtcgacaaggtcaag 191
             ||||||||||||||||||||
Sbjct: 74982 ggatcgtcgacaaggtcaag 74963
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>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence
          Length = 229483

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    ggatcgtcgacaaggtcaag 191
              ||||||||||||||||||||
Sbjct: 186479 ggatcgtcgacaaggtcaag 186498
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>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome
          Length = 231236

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    ggatcgtcgacaaggtcaag 191
              ||||||||||||||||||||
Sbjct: 151452 ggatcgtcgacaaggtcaag 151471
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>ref|XM_862875.1| PREDICTED: Canis familiaris similar to Midasin (MIDAS-containing
             protein), transcript variant 2 (LOC474995), mRNA
          Length = 16583

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   tgcacacagccaaggaggtt 307
             ||||||||||||||||||||
Sbjct: 12548 tgcacacagccaaggaggtt 12529
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>ref|XM_532232.2| PREDICTED: Canis familiaris similar to Midasin (MIDAS-containing
             protein), transcript variant 1 (LOC474995), mRNA
          Length = 16802

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 288   tgcacacagccaaggaggtt 307
             ||||||||||||||||||||
Sbjct: 12767 tgcacacagccaaggaggtt 12748
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>gb|AC131691.4| Mus musculus BAC clone RP23-388P2 from chromosome 16, complete sequence
          Length = 202652

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    gccgcggcggtggcggccgc 144
              ||||||||||||||||||||
Sbjct: 172883 gccgcggcggtggcggccgc 172902
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>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome
          Length = 241087

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    ggatcgtcgacaaggtcaag 191
              ||||||||||||||||||||
Sbjct: 154357 ggatcgtcgacaaggtcaag 154376
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 124     cgccgcggcggtggcggccg 143
               ||||||||||||||||||||
Sbjct: 3598505 cgccgcggcggtggcggccg 3598524
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>gb|AY186194.1| Rhesus cytomegalovirus strain 68-1, complete genome
          Length = 221454

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    ggatcgtcgacaaggtcaag 191
              ||||||||||||||||||||
Sbjct: 140629 ggatcgtcgacaaggtcaag 140648
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>emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complete genome
          Length = 229354

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    ggatcgtcgacaaggtcaag 191
              ||||||||||||||||||||
Sbjct: 152020 ggatcgtcgacaaggtcaag 152039
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>gb|DQ120516.1| Cercopithecine herpesvirus 8 isolate CMV 180.92, complete genome
          Length = 215678

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    ggatcgtcgacaaggtcaag 191
              ||||||||||||||||||||
Sbjct: 140637 ggatcgtcgacaaggtcaag 140656
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>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome
          Length = 195859

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    ggatcgtcgacaaggtcaag 191
              ||||||||||||||||||||
Sbjct: 162850 ggatcgtcgacaaggtcaag 162869
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 128     gcggcggtggcggccgccgg 147
               ||||||||||||||||||||
Sbjct: 3404337 gcggcggtggcggccgccgg 3404356
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 122      ggcgccgcggcggtggcggc 141
                ||||||||||||||||||||
Sbjct: 28999135 ggcgccgcggcggtggcggc 28999116
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 110      cgagaaggcggaggcgccgc 129
                ||||||||||||||||||||
Sbjct: 32555003 cgagaaggcggaggcgccgc 32554984
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>gb|AC006464.3| Homo sapiens BAC clone RP11-436C12 from 2, complete sequence
          Length = 99908

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 265   aaggaaatttggaaccaattatgt 288
             |||||||||||||| |||||||||
Sbjct: 39418 aaggaaatttggaagcaattatgt 39395
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>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0001B06
          Length = 140304

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    ggcgccgcggcggtggcggc 141
              ||||||||||||||||||||
Sbjct: 121072 ggcgccgcggcggtggcggc 121053
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>dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0498B01
          Length = 146812

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   ggcgccgcggcggtggcggc 141
             ||||||||||||||||||||
Sbjct: 59665 ggcgccgcggcggtggcggc 59646
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>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0596H10
          Length = 166570

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   ggcgccgcggcggtggcggc 141
             ||||||||||||||||||||
Sbjct: 14122 ggcgccgcggcggtggcggc 14103
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>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1353_F08
          Length = 101988

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   cgagaaggcggaggcgccgc 129
             ||||||||||||||||||||
Sbjct: 51976 cgagaaggcggaggcgccgc 51957
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>dbj|AK066823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075K03, full
           insert sequence
          Length = 1188

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 cgagaaggcggaggcgccgc 129
           ||||||||||||||||||||
Sbjct: 385 cgagaaggcggaggcgccgc 404
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>dbj|AK064009.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-G10, full
           insert sequence
          Length = 2271

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 122 ggcgccgcggcggtggcggc 141
           ||||||||||||||||||||
Sbjct: 130 ggcgccgcggcggtggcggc 149
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>gb|AF047524.1|AF047524 Human cytomegalovirus UL104 gene, complete cds
          Length = 2094

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  ggatcgtcgacaaggtcaag 191
            ||||||||||||||||||||
Sbjct: 2016 ggatcgtcgacaaggtcaag 2035
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 128     gcggcggtggcggccgccgg 147
               ||||||||||||||||||||
Sbjct: 3413042 gcggcggtggcggccgccgg 3413061


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,091,521
Number of Sequences: 3902068
Number of extensions: 2091521
Number of successful extensions: 56814
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55754
Number of HSP's gapped (non-prelim): 1060
length of query: 355
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 333
effective length of database: 17,147,199,772
effective search space: 5710017524076
effective search space used: 5710017524076
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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