ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl56e06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_195183.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala synthetase (OSJNBb0022I16.5), mRNA Length = 1056 Score = 305 bits (154), Expect = 7e-80 Identities = 211/230 (91%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 73 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 132 Query: 282 aacgccggtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 341 |||||||| |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 133 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 192 Query: 342 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 401 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 193 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 252 Query: 402 aacgacctcgacgacgtcggcaaggacacataccaccacaccttcttcga 451 |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 253 aacgacctcgacgacgtcgggaaggacacctaccaccacaccttcttcga 302
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15, complete sequence Length = 156023 Score = 305 bits (154), Expect = 7e-80 Identities = 211/230 (91%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 155149 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 155208 Query: 282 aacgccggtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 341 |||||||| |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 155209 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 155268 Query: 342 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 401 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 155269 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 155328 Query: 402 aacgacctcgacgacgtcggcaaggacacataccaccacaccttcttcga 451 |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 155329 aacgacctcgacgacgtcgggaaggacacctaccaccacaccttcttcga 155378
>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0022I16, complete sequence Length = 127068 Score = 305 bits (154), Expect = 7e-80 Identities = 211/230 (91%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 46576 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 46635 Query: 282 aacgccggtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 341 |||||||| |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 46636 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 46695 Query: 342 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 401 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 46696 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 46755 Query: 402 aacgacctcgacgacgtcggcaaggacacataccaccacaccttcttcga 451 |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 46756 aacgacctcgacgacgtcgggaaggacacctaccaccacaccttcttcga 46805
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 305 bits (154), Expect = 7e-80 Identities = 211/230 (91%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 5283378 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 5283437 Query: 282 aacgccggtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 341 |||||||| |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 5283438 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 5283497 Query: 342 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 401 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 5283498 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 5283557 Query: 402 aacgacctcgacgacgtcggcaaggacacataccaccacaccttcttcga 451 |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 5283558 aacgacctcgacgacgtcgggaaggacacctaccaccacaccttcttcga 5283607
>dbj|AK066368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059M16, full insert sequence Length = 3214 Score = 305 bits (154), Expect = 7e-80 Identities = 211/230 (91%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 219 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 278 Query: 282 aacgccggtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 341 |||||||| |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 279 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 338 Query: 342 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 401 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 339 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 398 Query: 402 aacgacctcgacgacgtcggcaaggacacataccaccacaccttcttcga 451 |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 399 aacgacctcgacgacgtcgggaaggacacctaccaccacaccttcttcga 448
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 305 bits (154), Expect = 7e-80 Identities = 211/230 (91%) Strand = Plus / Plus Query: 222 cacacgccgtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgcc 281 ||||||| ||||||||| |||||||| || ||| |||| ||||||||||| ||||||||| Sbjct: 5284165 cacacgcggtggccgtccagccccgtcgtccccgtcgacgaccccacgctgctgttcgcc 5284224 Query: 282 aacgccggtatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccg 341 |||||||| |||||||||| ||||||||||||||||||| |||||| ||||||| ||||| Sbjct: 5284225 aacgccgggatgaaccagttcaagccggtcttcctcggcaccgccgccccggacgcgccg 5284284 Query: 342 ctcggccgcctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcac 401 || |||||||| ||||| |||||||||||||||||||||||||||||||| || |||||| Sbjct: 5284285 ctgggccgcctccgccgcgcctgcaacacccagaagtgcatccgcgccggggggaagcac 5284344 Query: 402 aacgacctcgacgacgtcggcaaggacacataccaccacaccttcttcga 451 |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 5284345 aacgacctcgacgacgtcgggaaggacacctaccaccacaccttcttcga 5284394
>gb|AY104750.1| Zea mays PCO077049 mRNA sequence Length = 3244 Score = 258 bits (130), Expect = 1e-65 Identities = 199/222 (89%) Strand = Plus / Plus Query: 230 gtggccgtcgagccccgtggtgcccttcgaggaccccacgctcctgttcgccaacgccgg 289 |||||||||||| |||||||| ||| |||| ||||||||||| |||||||||||||| || Sbjct: 227 gtggccgtcgagtcccgtggtccccgtcgacgaccccacgctgctgttcgccaacgctgg 286 Query: 290 tatgaaccagtacaagccggtcttcctcggcgccgccgacccggactcgccgctcggccg 349 |||||||||| ||||||||||||||||||| | || | |||||||||||||||||||| Sbjct: 287 aatgaaccagttcaagccggtcttcctcggcacagcggcgccggactcgccgctcggccg 346 Query: 350 cctgcgccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcacaacgacct 409 ||||| ||||||||| |||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 347 cctgcaccgtgcctgtaacacccaaaagtgcatccgcgccggcgggaagcacaacgacct 406 Query: 410 cgacgacgtcggcaaggacacataccaccacaccttcttcga 451 ||||||||| || || ||||| |||||||| ||||||||||| Sbjct: 407 cgacgacgtggggaatgacacctaccaccataccttcttcga 448
>dbj|AK111163.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B04, full insert sequence Length = 3036 Score = 125 bits (63), Expect = 1e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 ||||||||||||||||||||||||||| |||||||||||||| |||||||| || ||||| Sbjct: 309 caacacccagaagtgcatccgcgccggtggcaagcacaacgatctcgacgatgtgggcaa 368 Query: 425 ggacacataccaccacaccttcttcga 451 ||||| |||||||||||||||||||| Sbjct: 369 ggacagctaccaccacaccttcttcga 395 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 280 ccaacgccggtatgaaccagtacaagcc 307 ||||||| |||||||||||||||||||| Sbjct: 224 ccaacgctggtatgaaccagtacaagcc 251
>ref|XM_318757.2| Anopheles gambiae str. PEST ENSANGP00000013174 (ENSANGG00000010685), partial mRNA Length = 2898 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 |||||| |||||||||||||| ||||| |||||||||||||| || |||||||||||||| Sbjct: 204 caacacgcagaagtgcatccgtgccggcggcaagcacaacgatctggacgacgtcggcaa 263 Query: 425 gga 427 ||| Sbjct: 264 gga 266 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 267 acgctcctgttcgccaacgccggtatgaaccagtacaagccggtcttcctcggc 320 ||||| ||||||||||| || || |||||||||| ||||||| |||| |||||| Sbjct: 106 acgctgctgttcgccaatgcgggcatgaaccagttcaagccgatctttctcggc 159
>ref|XM_756287.1| Ustilago maydis 521 hypothetical protein (UM05233.1) partial mRNA Length = 2973 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 375 aagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggacacatac 434 ||||||||||| || || || ||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 271 aagtgcatccgtgcaggtggtaagcataacgacctcgacgacgttggcaaggacacctac 330 Query: 435 caccacaccttcttcga 451 ||||| ||||| ||||| Sbjct: 331 caccatacctttttcga 347 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 252 cccttcgaggaccccacgctcctgttcgccaacgccggtatgaaccagtacaa 304 |||| ||| ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 148 ccctacgatgacccaacgcttctcttcgccaacgccggtatgaaccagtacaa 200
>ref|NM_205934.1| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RB, transcript variant B (Aats-ala), mRNA Length = 3290 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| ||||| Sbjct: 433 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 492 Query: 425 gga 427 ||| Sbjct: 493 gga 495 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 307 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 332 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 375
>ref|NM_078787.2| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RA, transcript variant A (Aats-ala), mRNA Length = 3151 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| ||||| Sbjct: 294 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 353 Query: 425 gga 427 ||| Sbjct: 354 gga 356 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 307 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 193 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 236
>gb|AY069255.1| Drosophila melanogaster GM03058 full length cDNA Length = 3308 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| ||||| Sbjct: 434 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 493 Query: 425 gga 427 ||| Sbjct: 494 gga 496 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 307 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 333 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 376
>gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, region 29C-29D, BAC clone BACR02I15, complete sequence Length = 186490 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| ||||| Sbjct: 3407 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 3348 Query: 425 gga 427 ||| Sbjct: 3347 gga 3345 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 307 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 3508 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 3465
>gb|AC092220.1|AC092220 Drosophila melanogaster, chromosome 2L, region 28B-29X, BAC clone BACR15P08, complete sequence Length = 170649 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| ||||| Sbjct: 24495 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 24554 Query: 425 gga 427 ||| Sbjct: 24555 gga 24557 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 307 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 24394 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 24437
>gb|AF188718.1|AF188718 Drosophila melanogaster alanyl-tRNA synthetase (alaS) mRNA, complete cds Length = 3117 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| ||||| Sbjct: 275 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 334 Query: 425 gga 427 ||| Sbjct: 335 gga 337 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 307 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 174 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 217
>gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30 of 83 of the complete sequence Length = 308031 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| ||||| Sbjct: 19569 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 19510 Query: 425 gga 427 ||| Sbjct: 19509 gga 19507 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 307 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 19670 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 19627
>gb|AC004423.1|AC004423 Drosophila melanogaster DNA sequence (P1 DS02110 (D147)), complete sequence Length = 79076 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 |||||| ||||||||||| |||||||| |||||||||||||| || |||||||| ||||| Sbjct: 1911 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 1852 Query: 425 gga 427 ||| Sbjct: 1851 gga 1849 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Minus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 307 |||||||| |||||||||||||||| ||||| |||| |||||| Sbjct: 2012 cccacgctgttgttcgccaacgccggcatgaatcagttcaagcc 1969
>ref|XM_960604.1| Neurospora crassa OR74A hypothetical protein (NCU02566.1) partial mRNA Length = 2742 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 375 aagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggacacatac 434 |||||||| ||||| || ||||| ||||| || |||||||| ||||||||||||| ||| Sbjct: 82 aagtgcattcgcgcgggtggcaaacacaatgatctcgacgatgtcggcaaggacagctac 141 Query: 435 caccacaccttctt 448 |||||||| ||||| Sbjct: 142 caccacactttctt 155
>ref|XM_331764.1| Neurospora crassa OR74A hypothetical protein (NCU02566.1) partial mRNA Length = 2742 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 375 aagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggacacatac 434 |||||||| ||||| || ||||| ||||| || |||||||| ||||||||||||| ||| Sbjct: 82 aagtgcattcgcgcgggtggcaaacacaatgatctcgacgatgtcggcaaggacagctac 141 Query: 435 caccacaccttctt 448 |||||||| ||||| Sbjct: 142 caccacactttctt 155
>ref|XM_789424.1| PREDICTED: Strongylocentrotus purpuratus similar to alanyl-tRNA synthetase (LOC589790), mRNA Length = 3300 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaag 425 |||| ||||||||||||||| ||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 220 aacagccagaagtgcatccgtgccggtggcaagcacaatgacctggacgatgtaggcaag 279 Query: 426 ga 427 || Sbjct: 280 ga 281 Score = 46.1 bits (23), Expect = 0.098 Identities = 41/47 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaagcc 307 ||||| || ||||| |||||||| || ||||||||||||| |||||| Sbjct: 115 gaccctaccctcctcttcgccaatgcgggtatgaaccagttcaagcc 161
>gb|BC033273.1| Mus musculus alanyl-tRNA synthetase, mRNA (cDNA clone MGC:25868 IMAGE:4196789), complete cds Length = 4891 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct: 532 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 591 Query: 429 acataccaccacaccttctt 448 ||||||||||| ||||| Sbjct: 592 gtctaccaccacactttctt 611 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 424 gaccccactctgctcttcgccaacgctggcatgaaccagt 463
>ref|NM_146217.3| Mus musculus alanyl-tRNA synthetase (Aars), mRNA Length = 4891 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct: 532 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 591 Query: 429 acataccaccacaccttctt 448 ||||||||||| ||||| Sbjct: 592 gtctaccaccacactttctt 611 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 424 gaccccactctgctcttcgccaacgctggcatgaaccagt 463
>gb|AY223875.1| Mus musculus alanyl-tRNA synthase (Aars) mRNA, complete cds Length = 3654 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct: 597 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 656 Query: 429 acataccaccacaccttctt 448 ||||||||||| ||||| Sbjct: 657 gtctaccaccacactttctt 676 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 489 gaccccactctgctcttcgccaacgctggcatgaaccagt 528
>dbj|AK158139.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930035D01 product:alanyl-tRNA synthetase, full insert sequence Length = 3677 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct: 606 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 665 Query: 429 acataccaccacaccttctt 448 ||||||||||| ||||| Sbjct: 666 gtctaccaccacactttctt 685 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 498 gaccccactctgctcttcgccaacgctggcatgaaccagt 537
>dbj|AK150227.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530145P07 product:alanyl-tRNA synthetase, full insert sequence Length = 3639 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct: 585 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 644 Query: 429 acataccaccacaccttctt 448 ||||||||||| ||||| Sbjct: 645 gtctaccaccacactttctt 664 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 477 gaccccactctgctcttcgccaacgctggcatgaaccagt 516
>dbj|AK036738.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830169C09 product:alanyl-tRNA synthetase, full insert sequence Length = 4191 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct: 266 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 325 Query: 429 acataccaccacaccttctt 448 ||||||||||| ||||| Sbjct: 326 gtctaccaccacactttctt 345 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 158 gaccccactctgctcttcgccaacgctggcatgaaccagt 197
>dbj|AK052744.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630041L13 product:similar to ALARS A [Caenorhabditis elegans], full insert sequence Length = 2222 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct: 266 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 325 Query: 429 acataccaccacaccttctt 448 ||||||||||| ||||| Sbjct: 326 gtctaccaccacactttctt 345 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 158 gaccccactctgctcttcgccaacgctggcatgaaccagt 197
>dbj|AK044451.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930013P06 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3463 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct: 408 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 467 Query: 429 acataccaccacaccttctt 448 ||||||||||| ||||| Sbjct: 468 gtctaccaccacactttctt 487 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 300 gaccccactctgctcttcgccaacgctggcatgaaccagt 339
>dbj|AK085725.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730028M10 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3653 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct: 598 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 657 Query: 429 acataccaccacaccttctt 448 ||||||||||| ||||| Sbjct: 658 gtctaccaccacactttctt 677 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 490 gaccccactctgctcttcgccaacgctggcatgaaccagt 529
>ref|XM_214690.3| PREDICTED: Rattus norvegicus alanyl-tRNA synthetase (predicted) (Aars_predicted), mRNA Length = 3639 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 ||||||||||||||||| ||||| ||||| ||||| ||||| || ||||| ||||| || Sbjct: 590 acccagaagtgcatccgagccgggggcaaacacaatgacctggatgacgtgggcaaagat 649 Query: 429 acataccaccacaccttctt 448 ||||||||||||||||| Sbjct: 650 gtctaccaccacaccttctt 669
>gb|AC093451.25| Mus musculus strain C57BL/6J chromosome 8 clone rp23-340n2, complete sequence Length = 198760 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct: 80695 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 80754 Query: 429 acataccaccacaccttctt 448 ||||||||||| ||||| Sbjct: 80755 gtctaccaccacactttctt 80774
>dbj|AB097816.1| Mesocricetus auratus mRNA for alanyl trna synthetase, complete cds Length = 2907 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 |||||||| |||||||| || || ||||| ||||||||||| || || || ||||||||| Sbjct: 214 acccagaaatgcatccgtgctgggggcaaacacaacgacctggatgatgtgggcaaggac 273 Query: 429 acataccaccacaccttctt 448 ||||||||||||||||| Sbjct: 274 gtctaccaccacaccttctt 293
>gb|AC140276.3| Mus musculus BAC clone RP23-336J13 from 8, complete sequence Length = 211518 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 |||||||| |||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct: 166511 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 166570 Query: 429 acataccaccacaccttctt 448 ||||||||||| ||||| Sbjct: 166571 gtctaccaccacactttctt 166590
>gb|BC097014.1| Danio rerio zgc:113920, mRNA (cDNA clone IMAGE:7448172), complete cds Length = 1983 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaag 425 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 308 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 367 Query: 426 gacacataccaccacaccttctt 448 ||| |||||| ||||||||||| Sbjct: 368 gacgtataccatcacaccttctt 390
>ref|NM_001040035.1| Danio rerio zgc:113920 (zgc:113920), mRNA Length = 1983 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaag 425 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 308 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 367 Query: 426 gacacataccaccacaccttctt 448 ||| |||||| ||||||||||| Sbjct: 368 gacgtataccatcacaccttctt 390
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 372 cagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||| ||| |||||||||| |||||||||||||||||||| |||||||| Sbjct: 3553692 cagaaatgcgtccgcgccggcggcaagcacaacgacctcgaaaacgtcggc 3553642
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||||||||||||| |||||||| Sbjct: 160237 cgcgccggcggcaagcacaacgacctcgacaacgtcggc 160199
>emb|AJ720131.1| Gallus gallus mRNA for hypothetical protein, clone 11d4 Length = 3107 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 |||||| |||||||||||||| || || ||||||||||| ||||| || || || || || Sbjct: 322 caacactcagaagtgcatccgagctgggggcaagcacaatgacctggatgatgtgggaaa 381 Query: 425 ggacacataccaccacaccttcttcga 451 ||| |||||||||||||||||||| Sbjct: 382 ggatgtctaccaccacaccttcttcga 408
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 371 ccagaagtgcatccgcgccggaggcaagcacaacgacct 409 |||||||||| |||||||||| ||||||||||||||||| Sbjct: 5218055 ccagaagtgcgtccgcgccggcggcaagcacaacgacct 5218017
>ref|NM_001005836.1| Gallus gallus alanyl-tRNA synthetase (AARS), mRNA Length = 3107 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 |||||| |||||||||||||| || || ||||||||||| ||||| || || || || || Sbjct: 322 caacactcagaagtgcatccgagctgggggcaagcacaatgacctggatgatgtgggaaa 381 Query: 425 ggacacataccaccacaccttcttcga 451 ||| |||||||||||||||||||| Sbjct: 382 ggatgtctaccaccacaccttcttcga 408
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 372 cagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||| ||| |||||||||| ||||||||||||||||||||| | |||||| Sbjct: 1704450 cagaaatgcgtccgcgccggcggcaagcacaacgacctcgacaatgtcggc 1704500
>ref|XM_702496.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 3 (LOC559189), mRNA Length = 3672 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaag 425 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 364 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 423 Query: 426 gacacataccaccacaccttctt 448 ||| |||||| ||||||||||| Sbjct: 424 gacgtataccatcacaccttctt 446 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 259 gaccccacgctgctcttcgccaatgccggaatgaacca 296
>ref|XM_679559.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 1 (LOC559189), mRNA Length = 3613 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaag 425 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 305 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 364 Query: 426 gacacataccaccacaccttctt 448 ||| |||||| ||||||||||| Sbjct: 365 gacgtataccatcacaccttctt 387 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 200 gaccccacgctgctcttcgccaatgccggaatgaacca 237
>emb|BX571883.3| Zebrafish DNA sequence from clone DKEY-151P17 in linkage group 18, complete sequence Length = 253172 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaag 425 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 243575 aacacacagaagtgcattcgtgccggtggcaaacacaatgacctcgatgatgtgggcaaa 243634 Query: 426 gacacataccaccacaccttctt 448 ||| |||||| ||||||||||| Sbjct: 243635 gacgtataccatcacaccttctt 243657 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 242002 gaccccacgctgctcttcgccaatgccggaatgaacca 242039 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 203829 gaccccacgctgctcttcgccaatgccggaatgaacca 203866 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 159527 gaccccacgctgctcttcgccaatgccggaatgaacca 159564
>emb|BX649641.19| Zebrafish DNA sequence from clone CH211-223O1 in linkage group 18, complete sequence Length = 141018 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaag 425 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 99718 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 99777 Query: 426 gacacataccaccacaccttctt 448 ||| |||||| ||||||||||| Sbjct: 99778 gacgtataccatcacaccttctt 99800 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 99166 gaccccacgctgctcttcgccaatgccggaatgaacca 99203 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 34711 gaccccacgctgctcttcgccaatgccggaatgaacca 34748 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 12338 gaccccacgctgctcttcgccaatgccggaatgaacca 12375
>gb|BC071378.1| Danio rerio alanyl-tRNA synthetase, mRNA (cDNA clone IMAGE:6895974), partial cds Length = 2471 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaag 425 ||||| ||||||||||| || ||||| ||||| ||||| |||||||| || || ||||| Sbjct: 410 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 469 Query: 426 gacacataccaccacaccttctt 448 ||| |||||| ||||||||||| Sbjct: 470 gacgtataccatcacaccttctt 492 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 305 gaccccacgctgctcttcgccaatgccggaatgaacca 342
>ref|XM_790098.1| PREDICTED: Strongylocentrotus purpuratus similar to alanyl tRNA Synthetase (106.8 kD) (ars-2) (LOC590495), partial mRNA Length = 198 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaag 425 |||| ||||||||||||||| ||||| ||||||||||| ||| | ||||| || |||||| Sbjct: 76 aacagccagaagtgcatccgtgccggtggcaagcacaatgacttggacgatgtaggcaag 135 Query: 426 ga 427 || Sbjct: 136 ga 137
>ref|XM_500483.1| Yarrowia lipolytica CLIB122, YALI0B04180g predicted mRNA Length = 2883 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 274 tgttcgccaacgccggtatgaaccagtacaagcc 307 |||| ||||||||||||||||||||||||||||| Sbjct: 131 tgtttgccaacgccggtatgaaccagtacaagcc 164 Score = 42.1 bits (21), Expect = 1.5 Identities = 63/77 (81%) Strand = Plus / Plus Query: 375 aagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggacacatac 434 |||||||| || |||||||| ||||||||||| || || || || || ||| | ||| Sbjct: 232 aagtgcattcgagccggaggaaagcacaacgatctggatgatgtgggacgagactcgtac 291 Query: 435 caccacaccttcttcga 451 ||||||||||||||||| Sbjct: 292 caccacaccttcttcga 308
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaag 425 ||||| |||||||| ||||| || || ||||||||||||||||| || ||||| || | Sbjct: 1350746 aacacgcagaagtgtatccgggcgggcggcaagcacaacgacctggaggacgttgggctg 1350687 Query: 426 gacacataccaccacaccttcttcga 451 ||| | ||||||||||| |||||||| Sbjct: 1350686 gactcgtaccaccacacgttcttcga 1350661 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaagccggtcttcct 316 ||||||||||| |||| || |||||||| |||||||||| ||||||| ||||||| Sbjct: 1350851 gaccccacgctgttgtttgcgaacgccgggatgaaccagttcaagccgatcttcct 1350796
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 372 cagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcgg 421 ||||||||| | |||||||| |||||||||||||||||||| ||||||| Sbjct: 4336125 cagaagtgcgtgcgcgccggcggcaagcacaacgacctcgagaacgtcgg 4336076 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ccgctcggccgcctgcgccg 358 |||||||||||||||||||| Sbjct: 4161736 ccgctcggccgcctgcgccg 4161755
>ref|NM_209812.1| Eremothecium gossypii ADR363Cp (ADR363C), mRNA Length = 2871 Score = 60.0 bits (30), Expect = 7e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaag 425 ||||| |||||||| ||||| || || ||||||||||||||||| || ||||| || | Sbjct: 223 aacacgcagaagtgtatccgggcgggcggcaagcacaacgacctggaggacgttgggctg 282 Query: 426 gacacataccaccacaccttcttcga 451 ||| | ||||||||||| |||||||| Sbjct: 283 gactcgtaccaccacacgttcttcga 308 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaagccggtcttcct 316 ||||||||||| |||| || |||||||| |||||||||| ||||||| ||||||| Sbjct: 118 gaccccacgctgttgtttgcgaacgccgggatgaaccagttcaagccgatcttcct 173
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 274 tgttcgccaacgccggtatgaaccagtacaagcc 307 |||| ||||||||||||||||||||||||||||| Sbjct: 553292 tgtttgccaacgccggtatgaaccagtacaagcc 553259 Score = 42.1 bits (21), Expect = 1.5 Identities = 63/77 (81%) Strand = Plus / Minus Query: 375 aagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggacacatac 434 |||||||| || |||||||| ||||||||||| || || || || || ||| | ||| Sbjct: 553191 aagtgcattcgagccggaggaaagcacaacgatctggatgatgtgggacgagactcgtac 553132 Query: 435 caccacaccttcttcga 451 ||||||||||||||||| Sbjct: 553131 caccacaccttcttcga 553115
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 367 acacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaagg 426 |||||||||||||||||||||| ||||||||||||||||| || ||||| || | Sbjct: 2171056 acacccagaagtgcatccgcgcttccggcaagcacaacgaccttgaagacgtggggcgcg 2170997 Query: 427 acacataccaccacaccttcttcga 451 | || |||||||||||||| ||||| Sbjct: 2170996 atacctaccaccacacctttttcga 2170972
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaag 305 ||||| ||||||||||||||||| ||||| |||||||||| |||| Sbjct: 163902 gacccaacgctcctgttcgccaatgccggcatgaaccagttcaag 163946 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 370 cccagaagtgcatccgcgccggaggcaagcacaacgacct 409 |||||||||| |||| ||||| ||||||||||||||||| Sbjct: 163996 cccagaagtgtgtccgggccggtggcaagcacaacgacct 164035
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 370 cccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| || | |||||||| ||||||||||||||||||||| | |||||| Sbjct: 25552 cccagaagagcgttcgcgccggcggcaagcacaacgacctcgacaatgtcggc 25604
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 370 cccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||||||||| | || ||||| ||||||||||||||||| ||||| |||||| Sbjct: 2140860 cccagaagtgcgtgcgggccggcggcaagcacaacgacctggacgaggtcggc 2140808
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 371 ccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||||| | |||||||| ||||||||||||||||| || |||||||| Sbjct: 4161016 ccagaagtgcgtgcgcgccggtggcaagcacaacgacctggaaaacgtcggc 4160965 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gtcttcctcggcgccgccga 328 |||||||||||||||||||| Sbjct: 2728320 gtcttcctcggcgccgccga 2728339
>ref|XM_588170.2| PREDICTED: Bos taurus similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) (LOC510933), mRNA Length = 3299 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 365 caacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 |||||| |||||||||||||| || || ||||| ||||| ||||| || ||||| ||||| Sbjct: 245 caacactcagaagtgcatccgggctggcggcaaacacaatgacctggatgacgtgggcaa 304 Query: 425 gga 427 ||| Sbjct: 305 gga 307
>ref|XM_571590.1| Cryptococcus neoformans var. neoformans JEC21 alanine-tRNA ligase (CNF02520) partial mRNA Length = 3234 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 266 cacgctcctgttcgccaacgccggtatgaaccagtacaagccggtcttcct 316 |||||| || |||||||| || |||||||||||||||||||| ||||||| Sbjct: 377 cacgcttcttttcgccaatgctggtatgaaccagtacaagcctctcttcct 427 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 399 cacaacgacctcgacgacgtcggcaaggacacataccaccacaccttctt 448 ||||||||||| |||||||| || |||||||| |||||||| || ||||| Sbjct: 510 cacaacgaccttgacgacgtaggaaaggacacttaccaccatactttctt 559
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||||||||||||| | |||||| Sbjct: 1821401 cgcgccggcggcaagcacaacgacctcgacaatgtcggc 1821439
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||||||||||||| | |||||| Sbjct: 1947055 cgcgccggcggcaagcacaacgacctcgacaatgtcggc 1947093
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||||||||||||| | |||||| Sbjct: 4276034 cgcgccggcggcaagcacaacgacctcgacaatgtcggc 4275996
>ref|NM_058880.2| Caenorhabditis elegans Alanyl tRNA Synthetase family member (ars-2) (ars-2) mRNA, complete cds Length = 3472 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 ||||| ||||||||||| |||||||| || ||||| |||||| | ||||| |||||||| Sbjct: 245 aacacgcagaagtgcattcgcgccggtggaaagcataacgacttggacgatgtcggcaa 303 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 276 ttcgccaacgccggtatgaaccagtacaagccggtcttcctcgg 319 ||||||||||| || |||||||| | ||||||| | |||||||| Sbjct: 155 ttcgccaacgcgggaatgaaccaattcaagccgttgttcctcgg 198
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| |||||||||||||||||||| |||||||| Sbjct: 583684 cgcgccggcggcaagcacaacgacctcgagaacgtcggc 583646
>gb|U97013.1| Caenorhabditis elegans cosmid F28H1, complete sequence Length = 23536 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 ||||| ||||||||||| |||||||| || ||||| |||||| | ||||| |||||||| Sbjct: 10511 aacacgcagaagtgcattcgcgccggtggaaagcataacgacttggacgatgtcggcaa 10569
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||||||||||||| | |||||| Sbjct: 6318206 cgcgccggcggcaagcacaacgacctcgacaatgtcggc 6318168
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| |||||||||||||||||||| |||||||| Sbjct: 841512 cgcgccggcggcaagcacaacgacctcgagaacgtcggc 841550
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 393 ggcaagcacaacgacctcgacgacgtcggcaaggacacataccaccacaccttcttcga 451 ||||||||||||||||| || || || || | ||||| |||||||||||||||||||| Sbjct: 1925775 ggcaagcacaacgacctggaggaggtggggcacgacacgtaccaccacaccttcttcga 1925717
>gb|U41660.1|CEU41660 Caenorhabditis elegans alanyl-tRNA synthetase-like protein AlaRS A mRNA, complete cds Length = 887 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaa 424 ||||| ||||||||||| |||||||| || ||||| |||||| | ||||| |||||||| Sbjct: 240 aacacgcagaagtgcattcgcgccggtggaaagcataacgacttggacgatgtcggcaa 298 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 276 ttcgccaacgccggtatgaaccagtacaagccggtcttcctcgg 319 ||||||||||| || |||||||| | ||||||| | |||||||| Sbjct: 150 ttcgccaacgcgggaatgaaccaattcaagccgttgttcctcgg 193
>emb|BX571657.1| Wolinella succinogenes, complete genome; segment 1/7 Length = 347961 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 378 tgcatccgcgccggaggcaagcacaacgac 407 ||||||||||| |||||||||||||||||| Sbjct: 322375 tgcatccgcgcaggaggcaagcacaacgac 322404
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgac 413 |||||||| ||||||||||||||||||||| Sbjct: 2422314 cgcgccggcggcaagcacaacgacctcgac 2422285
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 264 cccacgctcctgttcgccaacgccggtatgaaccagtacaag 305 ||||||||| | ||| ||||||||||||||||||||| |||| Sbjct: 3572273 cccacgctcttattcaccaacgccggtatgaaccagttcaag 3572232
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcga 412 |||||||| |||||||||||||||||||| Sbjct: 906195 cgcgccggcggcaagcacaacgacctcga 906223
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcga 412 |||||||| |||||||||||||||||||| Sbjct: 273291 cgcgccggcggcaagcacaacgacctcga 273263
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcga 412 |||||||| |||||||||||||||||||| Sbjct: 289268 cgcgccggcggcaagcacaacgacctcga 289240
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcga 412 |||||||| |||||||||||||||||||| Sbjct: 194225 cgcgccggcggcaagcacaacgacctcga 194253
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaag 305 ||||| ||||| |||||| |||| |||||||||||||||| |||| Sbjct: 172936 gacccgacgctgctgttcaccaatgccggtatgaaccagttcaag 172980
>dbj|AK192606.1| Mus musculus cDNA, clone:Y1G0109G10, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063919, based on BLAT search Length = 226 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacct 409 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 178 acccagaaatgcatccgagctgggggcaagcacaacgacct 218 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagt 300 |||||||| || || ||||||||||| || |||||||||| Sbjct: 70 gaccccaccctgctcttcgccaacgctggcatgaaccagt 109
>ref|NM_001031056.1| Gallus gallus alanyl-tRNA synthetase like (AARSL), mRNA Length = 3367 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 396 aagcacaacgacctcgacgacgtcggcaaggacacataccaccacaccttcttcga 451 |||||||| ||||| || ||||| ||| ||||| |||||||||||||||||||| Sbjct: 355 aagcacaatgacctggaggacgtgggccgtgacacctaccaccacaccttcttcga 410
>ref|XM_381082.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00906.1) partial mRNA Length = 2874 Score = 48.1 bits (24), Expect = 0.025 Identities = 51/60 (85%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaagccggtcttcctcggc 320 |||||||| || || ||| ||||||| || |||||||||| |||||| ||||||||||| Sbjct: 115 gaccccaccctgctcttcaccaacgctggcatgaaccagttcaagcccatcttcctcggc 174
>gb|AC125476.30| Medicago truncatula clone mth2-10e13, complete sequence Length = 153919 Score = 48.1 bits (24), Expect = 0.025 Identities = 75/92 (81%) Strand = Plus / Plus Query: 357 cgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgac 416 ||||||||||| | ||||||||| ||||| || || || |||||||| || || || ||| Sbjct: 107103 cgtgcctgcaatatccagaagtgtatccgagcaggtggtaagcacaatgatcttgatgac 107162 Query: 417 gtcggcaaggacacataccaccacaccttctt 448 || || || ||||| ||||| ||||| ||||| Sbjct: 107163 gtggggaaagacacttaccatcacactttctt 107194 Score = 42.1 bits (21), Expect = 1.5 Identities = 75/93 (80%) Strand = Plus / Plus Query: 356 ccgtgcctgcaacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacga 415 |||||| ||||| ||||| |||||||| || || || || |||||||| || || ||||| Sbjct: 86114 ccgtgcttgcaatacccaaaagtgcattcgagctggtggtaagcacaatgatcttgacga 86173 Query: 416 cgtcggcaaggacacataccaccacaccttctt 448 || || | ||||| ||||| ||||||||||| Sbjct: 86174 tgtgggggaagacacttaccatcacaccttctt 86206
>ref|XM_970534.1| PREDICTED: Tribolium castaneum similar to CG4633-PA (LOC664536), mRNA Length = 3135 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 372 cagaagtgcatccgcgccggaggcaagcacaacgac 407 |||||||||||||| | ||||||||| ||||||||| Sbjct: 412 cagaagtgcatccgagtcggaggcaaacacaacgac 447
>emb|AJ720883.1| Gallus gallus mRNA for hypothetical protein, clone 28n18 Length = 3367 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 396 aagcacaacgacctcgacgacgtcggcaaggacacataccaccacaccttcttcga 451 |||||||| ||||| || ||||| ||| ||||| |||||||||||||||||||| Sbjct: 355 aagcacaatgacctggaggacgtgggccgtgacacctaccaccacaccttcttcga 410
>gb|AE005920.1| Caulobacter crescentus CB15 section 246 of 359 of the complete genome Length = 10062 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Minus Query: 375 aagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||| | |||||||| ||||||||||||||||| ||| | |||||| Sbjct: 9744 aagtgcgttcgcgccggcggcaagcacaacgacctggacaatgtcggc 9697
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Minus Query: 370 cccagaagtgcatccgcgccggaggcaagcacaacgacct 409 ||||||||||| | || |||||||||||||| |||||||| Sbjct: 1680298 cccagaagtgcgttcgggccggaggcaagcataacgacct 1680259
>gb|AE004524.1| Pseudomonas aeruginosa PAO1, section 85 of 529 of the complete genome Length = 11749 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 371 ccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||| ||| | |||||||| ||||||||||||||||| || |||||||| Sbjct: 9210 ccagaaatgcgtgcgcgccggcggcaagcacaacgacctggaaaacgtcggc 9261
>gb|AF011922.1|AF011922 Pseudomonas aeruginosa aru gene cluster, ArgR regulatory protein (argR), succinylornithine aminotransferase (aruC), arginine/ornithine succinyltransferase AI subunit (aruF), arginine/ornithine succinyltransferase AII subunit (aruG), succinylglutamate 5-semialdehyde dehydrogenase (aruD), succinylarginine dihydrolase (aruB), succinylglutamate desuccinylase (aruE) genes, complete cds; and alanine tRNA synthetase (alaS) gene, partial cds Length = 12949 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Plus Query: 371 ccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||| ||| | |||||||| ||||||||||||||||| || |||||||| Sbjct: 12588 ccagaaatgcgtgcgcgccggcggcaagcacaacgacctggaaaacgtcggc 12639
>gb|AY846866.1| Antheraea pernyi nucleopolyhedrovirus occlusion-derived virus envelope-56 protein (odv-e56) gene, complete cds Length = 1602 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 cgccgccgacccggactcgccgc 342 ||||||||||||||||||||||| Sbjct: 990 cgccgccgacccggactcgccgc 1012
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/39 (89%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||| || |||||||||||||||||||| |||||||| Sbjct: 1524941 cgcgcgggcggcaagcacaacgacctcgagaacgtcggc 1524979
>gb|DQ486030.1| Antheraea pernyi nucleopolyhedrovirus, complete genome Length = 126479 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 cgccgccgacccggactcgccgc 342 ||||||||||||||||||||||| Sbjct: 7946 cgccgccgacccggactcgccgc 7968
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/39 (89%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| |||||||| |||||||||||| | |||||| Sbjct: 166334 cgcgccggcggcaagcataacgacctcgacaatgtcggc 166296
>emb|X59957.1|RMRECA R.meliloti recA gene and alaS gene 5' end for the RecA protein and alanyl-tRNA synthetase, respectively Length = 2639 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/39 (89%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| |||||||| |||||||||||| | |||||| Sbjct: 2240 cgcgccggcggcaagcataacgacctcgacaatgtcggc 2278
>ref|NM_001605.1| Homo sapiens alanyl-tRNA synthetase (AARS), mRNA Length = 3344 Score = 46.1 bits (23), Expect = 0.098 Identities = 68/83 (81%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 ||||||||||||||||| || || ||||| || || ||||| ||||| || |||||||| Sbjct: 324 acccagaagtgcatccgggctgggggcaaacaaaatgacctggacgatgtgggcaaggat 383 Query: 429 acataccaccacaccttcttcga 451 || || |||||||||||||| Sbjct: 384 gtctatcatcacaccttcttcga 406
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/39 (89%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||||||||| || |||||||| Sbjct: 3072342 cgcgccggcggcaagcacaacgacctggaaaacgtcggc 3072304
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/39 (89%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||||||||| || |||||||| Sbjct: 3479205 cgcgccggcggcaagcacaacgacctggaaaacgtcggc 3479167
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/39 (89%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| |||||||||||||| ||||| |||||||| Sbjct: 598444 cgcgccggcggcaagcacaacgatctcgagaacgtcggc 598406
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgt 418 |||||||| |||||||||||||| |||||| |||| Sbjct: 1319484 cgcgccggcggcaagcacaacgatctcgacaacgt 1319518
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/39 (89%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||||| ||||||||||| |||||||| |||||||| Sbjct: 3251691 cgcgccggcggcaagcacaatgacctcgataacgtcggc 3251653 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 gactcgccgctcggccgcctgcgc 356 ||||||||| |||||||||||||| Sbjct: 3882430 gactcgccggtcggccgcctgcgc 3882453
>gb|AC093491.3| Homo sapiens chromosome 16 clone RP11-410N2, complete sequence Length = 162176 Score = 46.1 bits (23), Expect = 0.098 Identities = 68/83 (81%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 ||||||||||||||||| || || ||||| || || ||||| ||||| || |||||||| Sbjct: 135115 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 135174 Query: 429 acataccaccacaccttcttcga 451 || || |||||||||||||| Sbjct: 135175 gtctatcatcacaccttcttcga 135197
>dbj|AK222824.1| Homo sapiens mRNA for alanyl-tRNA synthetase variant, clone: HEP06614 Length = 3372 Score = 46.1 bits (23), Expect = 0.098 Identities = 68/83 (81%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 ||||||||||||||||| || || ||||| || || ||||| ||||| || |||||||| Sbjct: 321 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 380 Query: 429 acataccaccacaccttcttcga 451 || || |||||||||||||| Sbjct: 381 gtctatcatcacaccttcttcga 403
>gb|AC009060.7|AC009060 Homo sapiens chromosome 16 clone RP11-296I10, complete sequence Length = 180596 Score = 46.1 bits (23), Expect = 0.098 Identities = 68/83 (81%) Strand = Plus / Minus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 ||||||||||||||||| || || ||||| || || ||||| ||||| || |||||||| Sbjct: 178362 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 178303 Query: 429 acataccaccacaccttcttcga 451 || || |||||||||||||| Sbjct: 178302 gtctatcatcacaccttcttcga 178280
>gb|BC011451.1| Homo sapiens alanyl-tRNA synthetase, mRNA (cDNA clone MGC:9334 IMAGE:3450606), complete cds Length = 3298 Score = 46.1 bits (23), Expect = 0.098 Identities = 68/83 (81%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 ||||||||||||||||| || || ||||| || || ||||| ||||| || |||||||| Sbjct: 256 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 315 Query: 429 acataccaccacaccttcttcga 451 || || |||||||||||||| Sbjct: 316 gtctatcatcacaccttcttcga 338
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 46.1 bits (23), Expect = 0.098 Identities = 35/39 (89%) Strand = Plus / Minus Query: 371 ccagaagtgcatccgcgccggaggcaagcacaacgacct 409 |||||||||| | || ||||| ||||||||||||||||| Sbjct: 5084075 ccagaagtgcgtgcgtgccggtggcaagcacaacgacct 5084037
>dbj|D32050.1|HUMATS Homo sapiens mRNA for alanyl-tRNA synthetase, complete cds Length = 3344 Score = 46.1 bits (23), Expect = 0.098 Identities = 68/83 (81%) Strand = Plus / Plus Query: 369 acccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggcaaggac 428 ||||||||||||||||| || || ||||| || || ||||| ||||| || |||||||| Sbjct: 324 acccagaagtgcatccgggctgggggcaaacaaaatgacctggacgatgtgggcaaggat 383 Query: 429 acataccaccacaccttcttcga 451 || || |||||||||||||| Sbjct: 384 gtctatcatcacaccttcttcga 406
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacct 409 |||||||| ||||||||||||||||| Sbjct: 1179567 cgcgccggcggcaagcacaacgacct 1179542
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Minus Query: 396 aagcacaacgacctcgacgacgtcggcaaggacacataccaccacacctt 445 |||||||||||| | |||||||| ||| ||||| |||||||||||||| Sbjct: 296393 aagcacaacgacttggacgacgtgggccgcgacacgtaccaccacacctt 296344
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Minus Query: 372 cagaagtgcatccgcgccggaggcaagcacaacgacctcgac 413 ||||| ||| ||||||| || ||||||||||| ||||||||| Sbjct: 2184182 cagaaatgcgtccgcgcgggcggcaagcacaatgacctcgac 2184141
>gb|AC084046.13| Trypanosoma brucei chromosome 6 clone RPCI93-3D8, complete sequence Length = 154240 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Minus Query: 396 aagcacaacgacctcgacgacgtcggcaaggacacataccaccacacctt 445 |||||||||||| | |||||||| ||| ||||| |||||||||||||| Sbjct: 89540 aagcacaacgacttggacgacgtgggccgcgacacgtaccaccacacctt 89491
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgacgacgtcgg 421 |||||||| ||||||||||| || |||||| ||||||| Sbjct: 1420447 cgcgccggcggcaagcacaatgatctcgacaacgtcgg 1420484
>ref|XM_821287.1| Trypanosoma brucei TREU927 clone RPCI93-3D8 alanyl-tRNA synthetase (Tb927.6.700) partial mRNA Length = 2901 Score = 44.1 bits (22), Expect = 0.39 Identities = 43/50 (86%) Strand = Plus / Plus Query: 396 aagcacaacgacctcgacgacgtcggcaaggacacataccaccacacctt 445 |||||||||||| | |||||||| ||| ||||| |||||||||||||| Sbjct: 250 aagcacaacgacttggacgacgtgggccgcgacacgtaccaccacacctt 299
>emb|X59956.1|RLRECA R.leguminosarum recA gene and alaS gene 5'end for the RecA protein and alanyl-tRNA synthetase, respectively Length = 1841 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgac 413 |||| ||| ||||||||||||||||||||| Sbjct: 1443 cgcgtcggcggcaagcacaacgacctcgac 1472
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 393 ggcaagcacaacgacctcgacgacgtcggc 422 |||||||||||||||||||| |||||||| Sbjct: 594218 ggcaagcacaacgacctcgaaaacgtcggc 594189
>emb|AJ243674.3|SGR243674 Streptomyces griseus subsp. griseus (partial) ppk, mutT, pstS, pstC, pstA, pstB, pitH genes and ORF Length = 9302 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 308 ggtcttcctcggcgccgccgacccgg 333 |||| ||||||||||||||||||||| Sbjct: 3000 ggtcgtcctcggcgccgccgacccgg 3025
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence Length = 197615 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgac 413 |||||||| |||||||| |||||||||||| Sbjct: 47196 cgcgccggcggcaagcataacgacctcgac 47225
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacctcgac 413 |||||||| |||||||||||||| |||||| Sbjct: 3880128 cgcgccggcggcaagcacaacgatctcgac 3880157
>ref|XM_694672.1| PREDICTED: Danio rerio similar to alanyl-tRNA synthetase (LOC571112), partial mRNA Length = 513 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 265 gaccccacgctgctcttcgccaatgccggaatgaacca 302
>ref|XM_685358.1| PREDICTED: Danio rerio similar to transglutaminase (LOC561962), mRNA Length = 3195 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 2275 gaccccacgctgctcttcgccaatgccggaatgaacca 2312
>ref|XM_685225.1| PREDICTED: Danio rerio similar to alanyl-tRNA synthetase (LOC561826), mRNA Length = 589 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 122 gaccccacgctgctcttcgccaatgccggaatgaacca 159
>ref|XM_685155.1| PREDICTED: Danio rerio similar to transglutaminase (LOC561748), mRNA Length = 1992 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 1525 gaccccacgctgctcttcgccaatgccggaatgaacca 1562
>ref|XM_683097.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) (LOC559731), mRNA Length = 589 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 122 gaccccacgctgctcttcgccaatgccggaatgaacca 159
>ref|XM_682611.1| PREDICTED: Danio rerio similar to alanyl-tRNA synthetase (LOC559282), mRNA Length = 2178 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 106 gaccccacgctgctcttcgccaatgccggaatgaacca 143
>ref|XM_702495.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 2 (LOC559189), mRNA Length = 589 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 122 gaccccacgctgctcttcgccaatgccggaatgaacca 159
>ref|XM_682457.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) (LOC559142), mRNA Length = 2334 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 106 gaccccacgctgctcttcgccaatgccggaatgaacca 143
>gb|AE009520.1| Brucella melitensis 16M chromosome I, section 77 of 195 of the complete sequence Length = 10543 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 384 cgcgccggaggcaagcacaacgacct 409 |||||||| ||||||||||||||||| Sbjct: 1904 cgcgccggcggcaagcacaacgacct 1929
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacct 409 |||||||| ||||||||||||||||| Sbjct: 1197675 cgcgccggcggcaagcacaacgacct 1197650
>emb|BX571681.7| Zebrafish DNA sequence from clone DKEY-73N10 in linkage group 18, complete sequence Length = 184543 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 151021 gaccccacgctgctcttcgccaatgccggaatgaacca 151058 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaacca 298 ||||||||||| || |||||||| ||||| |||||||| Sbjct: 122916 gaccccacgctgctcttcgccaatgccggaatgaacca 122953
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 384 cgcgccggaggcaagcacaacgacct 409 |||||||| ||||||||||||||||| Sbjct: 1194826 cgcgccggcggcaagcacaacgacct 1194801
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 288 ggtatgaaccagtacaagccggtcttcct 316 |||||||||||||||||||| ||||||| Sbjct: 732024 ggtatgaaccagtacaagcctctcttcct 731996
>ref|XM_921089.2| PREDICTED: Mus musculus hypothetical LOC634280 (LOC634280), mRNA Length = 792 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cgctcggccgcctgcgccgtg 360 ||||||||||||||||||||| Sbjct: 647 cgctcggccgcctgcgccgtg 627
>ref|XM_898698.2| PREDICTED: Mus musculus hypothetical LOC625276 (LOC625276), mRNA Length = 792 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cgctcggccgcctgcgccgtg 360 ||||||||||||||||||||| Sbjct: 647 cgctcggccgcctgcgccgtg 627
>ref|XM_445923.1| Candida glabrata CBS138, CAGL0E05390g partial mRNA Length = 2871 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 396 aagcacaacgacctcgacgacgtcggcaaggacacataccaccacaccttctt 448 |||||||||||| | || || ||||| |||||| | ||||||||||| ||||| Sbjct: 253 aagcacaacgacttggaggatgtcggtaaggactcctaccaccacactttctt 305 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 273 ctgttcgccaacgccggtatgaaccagtacaa 304 |||||| ||||||| ||||||||||| ||||| Sbjct: 130 ctgttcaccaacgcgggtatgaaccaatacaa 161
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 396 aagcacaacgacctcgacgacgtcggcaaggacacataccaccacaccttctt 448 |||||||||||| | || || ||||| |||||| | ||||||||||| ||||| Sbjct: 527098 aagcacaacgacttggaggatgtcggtaaggactcctaccaccacactttctt 527046 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 273 ctgttcgccaacgccggtatgaaccagtacaa 304 |||||| ||||||| ||||||||||| ||||| Sbjct: 527221 ctgttcaccaacgcgggtatgaaccaatacaa 527190
>emb|BX842632.1| Neurospora crassa DNA linkage group I BAC contig B5K2 Length = 86737 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 408 ctcgacgacgtcggcaaggacacataccaccac 440 |||||||| ||||||||||||| ||||||||| Sbjct: 67566 ctcgacgatgtcggcaaggacagctaccaccac 67598
>gb|AY017381.1| Fibrobacter succinogenes S85 alanyl-tRNA synthase gene, partial cds Length = 171 Score = 42.1 bits (21), Expect = 1.5 Identities = 72/89 (80%) Strand = Plus / Plus Query: 363 tgcaacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||||| |||||||||| |||||| || ||||||||||||||||||| ||| ||| Sbjct: 73 tgcaacagccagaagtgcctccgcgtgtccggtaagcacaacgacctcgacgtcgtgggc 132 Query: 423 aaggacacataccaccacaccttcttcga 451 |||| ||||| ||||| |||||||| Sbjct: 133 cgcgacaactaccatcacactttcttcga 161
>gb|AF332359.1|AF332359 Fibrobacter succinogenes S85 alanyl-tRNA synthase gene, partial cds Length = 171 Score = 42.1 bits (21), Expect = 1.5 Identities = 72/89 (80%) Strand = Plus / Plus Query: 363 tgcaacacccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||||| |||||||||| |||||| || ||||||||||||||||||| ||| ||| Sbjct: 73 tgcaacagccagaagtgcctccgcgtgtccggtaagcacaacgacctcgacgtcgtgggc 132 Query: 423 aaggacacataccaccacaccttcttcga 451 |||| ||||| ||||| |||||||| Sbjct: 133 cgcgacaactaccatcacactttcttcga 161
>dbj|AK183233.1| Mus musculus cDNA, clone:Y0G0125D01, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063919, based on BLAT search Length = 226 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 373 agaagtgcatccgcgccggaggcaagcacaacgacct 409 |||| |||||||| || || ||||||||||||||||| Sbjct: 182 agaaatgcatccgagctgggggcaagcacaacgacct 218
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 301 acaagccggtcttcctcggcgccgccgac 329 ||||| |||||||| |||||||||||||| Sbjct: 575415 acaagtcggtcttcgtcggcgccgccgac 575443
>gb|AC116769.11| Mus musculus chromosome 15, clone RP23-415L16, complete sequence Length = 201535 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 cgctcggccgcctgcgccgtg 360 ||||||||||||||||||||| Sbjct: 23900 cgctcggccgcctgcgccgtg 23880
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 261 gaccccacgctcctgttcgccaacgccggtatgaaccagtacaag 305 |||||||||||| ||||| |||| ||||| ||||| |||| |||| Sbjct: 1322035 gaccccacgctcatgttcaccaatgccggcatgaatcagttcaag 1322079 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 ggcaagcacaacgacctcga 412 |||||||||||||||||||| Sbjct: 1322152 ggcaagcacaacgacctcga 1322171
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 370 cccagaagtgcatccgcgccggaggcaagcacaacgacctcgac 413 ||||||| ||| | ||||| || ||||||||||| ||||||||| Sbjct: 2161380 cccagaaatgcgtgcgcgcaggcggcaagcacaatgacctcgac 2161337
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 370 cccagaagtgcatccgcgccggaggcaagcacaacgacct 409 ||||||||||| | || ||||| || |||||||||||||| Sbjct: 232591 cccagaagtgcgtgcgggccggggggaagcacaacgacct 232630
>ref|XM_467910.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1559 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gtcttcctcggcgccgccga 328 |||||||||||||||||||| Sbjct: 570 gtcttcctcggcgccgccga 589
>gb|BC008881.2| Homo sapiens kinesin 2, transcript variant 1, mRNA (cDNA clone MGC:15245 IMAGE:4301579), complete cds Length = 2595 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 ccgctcggccgcctgcgccg 358 |||||||||||||||||||| Sbjct: 21 ccgctcggccgcctgcgccg 2
>ref|XM_363444.1| Magnaporthe grisea 70-15 hypothetical protein (MG01370.4) partial mRNA Length = 2184 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 acacgccgtggccgtcgagc 242 |||||||||||||||||||| Sbjct: 943 acacgccgtggccgtcgagc 924
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 387 gccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||| ||||||||||| ||||| ||| |||||||| Sbjct: 701061 gccgggggcaagcacaatgacctggacaacgtcggc 701096
>ref|XM_677497.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9320.2), mRNA Length = 3165 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ctggccgtccgccctggtcc 186 |||||||||||||||||||| Sbjct: 2580 ctggccgtccgccctggtcc 2599
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 387 gccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||| ||||||||||||||||| || |||||||| Sbjct: 2010644 gccggtggcaagcacaacgacctggaaaacgtcggc 2010679
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 6.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 387 gccggaggcaagcacaacgacctcgacgacgtcggc 422 ||||| ||||||||||||||||| || |||||||| Sbjct: 4050725 gccggtggcaagcacaacgacctggaaaacgtcggc 4050690
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcggccgcctgcgccgtgc 361 |||||||||||||||||||| Sbjct: 134136 ctcggccgcctgcgccgtgc 134155
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcggccgcctgcgccgtgc 361 |||||||||||||||||||| Sbjct: 133096 ctcggccgcctgcgccgtgc 133115
>ref|XM_851041.1| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit), transcript variant 3 (LOC482962), mRNA Length = 2121 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgcgccgcctgctcctcacc 47 |||||||||||||||||||| Sbjct: 86 cgcgccgcctgctcctcacc 105
>ref|XM_851001.1| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit), transcript variant 2 (LOC482962), mRNA Length = 1891 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgcgccgcctgctcctcacc 47 |||||||||||||||||||| Sbjct: 86 cgcgccgcctgctcctcacc 105
>ref|XM_540075.2| PREDICTED: Canis familiaris similar to Cleavage and polyadenylation specificity factor, 73 kDa subunit (CPSF 73 kDa subunit), transcript variant 1 (LOC482962), mRNA Length = 2269 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cgcgccgcctgctcctcacc 47 |||||||||||||||||||| Sbjct: 86 cgcgccgcctgctcctcacc 105
>emb|Z49821.1|SCPDR10 S.cerevisiae PDR10, MYO2, PDR10, SCD5, MIP1, ALA1, KRE5 and TEA1 genes Length = 29445 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 276 ttcgccaacgccggtatgaaccagtacaagcc 307 ||||| || |||||||||||||| |||||||| Sbjct: 21231 ttcgctaatgccggtatgaaccaatacaagcc 21200
>gb|AY129337.1| Mycobacteriophage Bxz1, complete genome Length = 156102 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 ctcgacgacgtcggcaagga 427 |||||||||||||||||||| Sbjct: 110401 ctcgacgacgtcggcaagga 110420
>gb|DQ417138.1| Ictalurus punctatus clone SBBD12B alanyl-tRNA synthetase-like mRNA, partial cds Length = 349 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 aacacccagaagtgcatccg 385 |||||||||||||||||||| Sbjct: 283 aacacccagaagtgcatccg 302
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcggccgcctgcgccgtgc 361 |||||||||||||||||||| Sbjct: 133375 ctcggccgcctgcgccgtgc 133394
>ref|NM_005552.3| Homo sapiens kinesin 2 (KNS2), transcript variant 1, mRNA Length = 2595 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 ccgctcggccgcctgcgccg 358 |||||||||||||||||||| Sbjct: 21 ccgctcggccgcctgcgccg 2
>gb|AY186732.1| Orf virus strain D1701 ankyrin-repeat protein ANK-1 (ANK-1), interleukin 10 (IL-10), ankyrin-repeat protein ANK-2 (ANK-2), ankyrin-repeat protein ANK-3 (ANK-3), vaccinia virus F10L-like protein (F10L), vaccinia virus F9L-like protein (F9L), vascular endothelial growth factor-like protein (VEGF-E), and ORF3 genes, complete cds Length = 9979 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcggccgcctgcgccgtgc 361 |||||||||||||||||||| Sbjct: 7314 ctcggccgcctgcgccgtgc 7333
>gb|DQ066215.1| Ixodes scapularis isolate ISUFL14 ADP/ATP translocase mRNA, complete cds Length = 900 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 298 agtacaagccggtcttcctcggcg 321 ||||||||| |||||||||||||| Sbjct: 281 agtacaagcaggtcttcctcggcg 304
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gtcttcctcggcgccgccga 328 |||||||||||||||||||| Sbjct: 32040633 gtcttcctcggcgccgccga 32040652
>emb|AL929404.19| Mouse DNA sequence from clone RP23-71H9 on chromosome 2, complete sequence Length = 187610 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 caagtcaaagccaagagctaggga 73 |||||||||||| ||||||||||| Sbjct: 109716 caagtcaaagcctagagctaggga 109739
>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1175_B01 Length = 96191 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gtcttcctcggcgccgccga 328 |||||||||||||||||||| Sbjct: 61008 gtcttcctcggcgccgccga 61027
>dbj|AK069088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007I17, full insert sequence Length = 1559 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gtcttcctcggcgccgccga 328 |||||||||||||||||||| Sbjct: 570 gtcttcctcggcgccgccga 589
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cgccgctcggccgcctgcgc 356 |||||||||||||||||||| Sbjct: 2089326 cgccgctcggccgcctgcgc 2089345
>emb|BX664601.6| Zebrafish DNA sequence from clone CH211-135J1 in linkage group 22, complete sequence Length = 76145 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tcacagcgcgccgcctgctc 41 |||||||||||||||||||| Sbjct: 28184 tcacagcgcgccgcctgctc 28203
>emb|BX465190.4| Zebrafish DNA sequence from clone DKEY-121A11 in linkage group 22, complete sequence Length = 183103 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tcacagcgcgccgcctgctc 41 |||||||||||||||||||| Sbjct: 18290 tcacagcgcgccgcctgctc 18271
>emb|Z75243.1|SCYOR335C S.cerevisiae chromosome XV reading frame ORF YOR335c Length = 3764 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 276 ttcgccaacgccggtatgaaccagtacaagcc 307 ||||| || |||||||||||||| |||||||| Sbjct: 2969 ttcgctaatgccggtatgaaccaatacaagcc 2938
>emb|AL139300.6|CNS01DXG Human chromosome 14 DNA sequence BAC R-894P9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 191563 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ccgctcggccgcctgcgccg 358 |||||||||||||||||||| Sbjct: 52087 ccgctcggccgcctgcgccg 52106
>gb|DQ332533.1| Synthetic construct Saccharomyces cerevisiae clone FLH202967.01X ALA1 gene, complete sequence Length = 2877 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 276 ttcgccaacgccggtatgaaccagtacaagcc 307 ||||| || |||||||||||||| |||||||| Sbjct: 133 ttcgctaatgccggtatgaaccaatacaagcc 164
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.1 Identities = 44/52 (84%) Strand = Plus / Minus Query: 371 ccagaagtgcatccgcgccggaggcaagcacaacgacctcgacgacgtcggc 422 |||||| ||| | ||||| || ||||||||||||||||| || |||||||| Sbjct: 1732602 ccagaaatgcctgcgcgcgggcggcaagcacaacgacctggaaaacgtcggc 1732551
>gb|U18672.1|SCU18672 Saccharomyces cerevisiae cytoplasmic alanyl-tRNA synthetase gene, complete cds Length = 2992 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 276 ttcgccaacgccggtatgaaccagtacaagcc 307 ||||| || |||||||||||||| |||||||| Sbjct: 196 ttcgctaatgccggtatgaaccaatacaagcc 227
>gb|U29944.1|OVU29944 Orf virus protein kinase homolog and F9L homolog genes, complete cds Length = 2211 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ctcggccgcctgcgccgtgc 361 |||||||||||||||||||| Sbjct: 1659 ctcggccgcctgcgccgtgc 1678 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,872,300 Number of Sequences: 3902068 Number of extensions: 2872300 Number of successful extensions: 67133 Number of sequences better than 10.0: 174 Number of HSP's better than 10.0 without gapping: 174 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62817 Number of HSP's gapped (non-prelim): 4310 length of query: 451 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 429 effective length of database: 17,147,199,772 effective search space: 7356148702188 effective search space used: 7356148702188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
