ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl56e04 |
|---|---|
| Clone Library Name | barley_pub |
>I2C4_MOUSE (Q8CJF8) Eukaryotic translation initiation factor 2C 4 (eIF2C 4)| (eIF-2C 4) (Argonaute-4) (Piwi/argonaute family protein meIF2C4) Length = 861 Score = 41.6 bits (96), Expect = 0.001 Identities = 24/57 (42%), Positives = 35/57 (61%) Frame = +2 Query: 257 RPGFGKRGNPIQLVTNHFKVSLKTTDEFFHHYYVNLKYEDDRPVDGKGVGRKVIDKL 427 RPG G G PI+L+ NHF+V + D +HY V++K E RP + V R+V+D + Sbjct: 18 RPGLGTVGKPIRLLANHFQVQIPKID--VYHYDVDIKPE-KRP---RRVNREVVDTM 68
>I2C4_HUMAN (Q9HCK5) Eukaryotic translation initiation factor 2C 4 (eIF2C 4)| (eIF-2C 4) (Argonaute-4) Length = 861 Score = 41.6 bits (96), Expect = 0.001 Identities = 24/57 (42%), Positives = 35/57 (61%) Frame = +2 Query: 257 RPGFGKRGNPIQLVTNHFKVSLKTTDEFFHHYYVNLKYEDDRPVDGKGVGRKVIDKL 427 RPG G G PI+L+ NHF+V + D +HY V++K E RP + V R+V+D + Sbjct: 18 RPGLGTVGKPIRLLANHFQVQIPKID--VYHYDVDIKPE-KRP---RRVNREVVDTM 68
>I2C1_MOUSE (Q8CJG1) Eukaryotic translation initiation factor 2C 1 (eIF2C 1)| (eIF-2C 1) (Argonaute-1) (Piwi/argonaute family protein meIF2C1) Length = 857 Score = 37.4 bits (85), Expect = 0.019 Identities = 22/61 (36%), Positives = 36/61 (59%) Frame = +2 Query: 257 RPGFGKRGNPIQLVTNHFKVSLKTTDEFFHHYYVNLKYEDDRPVDGKGVGRKVIDKLQQT 436 RPG G G PI+L+ N+F+V + D +HY V++K D P + V R+V++ + Q Sbjct: 26 RPGIGTVGKPIKLLANYFEVDIPKID--VYHYEVDIK-PDKCP---RRVNREVVEYMVQH 79 Query: 437 Y 439 + Sbjct: 80 F 80
>I2C1_HUMAN (Q9UL18) Eukaryotic translation initiation factor 2C 1 (eIF2C 1)| (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99) Length = 857 Score = 37.4 bits (85), Expect = 0.019 Identities = 22/61 (36%), Positives = 36/61 (59%) Frame = +2 Query: 257 RPGFGKRGNPIQLVTNHFKVSLKTTDEFFHHYYVNLKYEDDRPVDGKGVGRKVIDKLQQT 436 RPG G G PI+L+ N+F+V + D +HY V++K D P + V R+V++ + Q Sbjct: 26 RPGIGTVGKPIKLLANYFEVDIPKID--VYHYEVDIK-PDKCP---RRVNREVVEYMVQH 79 Query: 437 Y 439 + Sbjct: 80 F 80
>I2C3_HUMAN (Q9H9G7) Eukaryotic translation initiation factor 2C 3 (eIF2C 3)| (eIF-2C 3) (Argonaute-3) Length = 860 Score = 37.0 bits (84), Expect = 0.025 Identities = 23/70 (32%), Positives = 39/70 (55%) Frame = +2 Query: 230 SKPRRALIARPGFGKRGNPIQLVTNHFKVSLKTTDEFFHHYYVNLKYEDDRPVDGKGVGR 409 ++P + RPG+G G PI+L+ N F+V + D + Y V++K D P + V R Sbjct: 11 AQPLLMVPRRPGYGTMGKPIKLLANCFQVEIPKIDVYL--YEVDIK-PDKCP---RRVNR 64 Query: 410 KVIDKLQQTY 439 +V+D + Q + Sbjct: 65 EVVDSMVQHF 74
>AGO1_ARATH (O04379) Argonaute protein| Length = 1048 Score = 35.0 bits (79), Expect = 0.097 Identities = 24/71 (33%), Positives = 31/71 (43%) Frame = +2 Query: 257 RPGFGKRGNPIQLVTNHFKVSLKTTDEFFHHYYVNLKYEDDRPVDGKGVGRKVIDKLQQT 436 RPG G+ G + NHF L D+ HHY V + E V +GV R V+ +L Sbjct: 182 RPGKGQSGKRCIVKANHFFAEL--PDKDLHHYDVTITPE----VTSRGVNRAVMKQLVDN 235 Query: 437 YASDLAHKTLP 469 Y LP Sbjct: 236 YRDSHLGSRLP 246
>I2C3_MOUSE (Q8CJF9) Eukaryotic translation initiation factor 2C 3 (eIF2C 3)| (eIF-2C 3) (Argonaute-3) (Piwi/argonaute family protein meIF2C3) Length = 860 Score = 35.0 bits (79), Expect = 0.097 Identities = 22/61 (36%), Positives = 34/61 (55%) Frame = +2 Query: 257 RPGFGKRGNPIQLVTNHFKVSLKTTDEFFHHYYVNLKYEDDRPVDGKGVGRKVIDKLQQT 436 RPG+G G PI+L+ N F+V + D + Y V++K D P + V R+V+D Q Sbjct: 20 RPGYGTMGKPIKLLANCFQVEIPKIDVYL--YEVDIK-PDKCP---RRVNREVVDSKVQH 73 Query: 437 Y 439 + Sbjct: 74 F 74
>PINH_ARATH (Q9XGW1) PINHEAD protein (ZWILLE protein)| Length = 988 Score = 34.7 bits (78), Expect = 0.13 Identities = 24/71 (33%), Positives = 31/71 (43%) Frame = +2 Query: 257 RPGFGKRGNPIQLVTNHFKVSLKTTDEFFHHYYVNLKYEDDRPVDGKGVGRKVIDKLQQT 436 RPGFG G + NHF L T D + Y V + E V K V R +I +L + Sbjct: 131 RPGFGTLGTKCIVKANHFLADLPTKD--LNQYDVTITPE----VSSKSVNRAIIAELVRL 184 Query: 437 YASDLAHKTLP 469 Y + LP Sbjct: 185 YKESDLGRRLP 195
>PDC_ASPFU (Q4WXX9) Pyruvate decarboxylase (EC 4.1.1.1)| Length = 569 Score = 33.9 bits (76), Expect = 0.22 Identities = 19/46 (41%), Positives = 26/46 (56%) Frame = +2 Query: 320 LKTTDEFFHHYYVNLKYEDDRPVDGKGVGRKVIDKLQQTYASDLAH 457 L T D FH YV ++Y + ++ KGV RKVI KL + A + H Sbjct: 313 LNTID--FHSTYVRVRYSEYPDINMKGVLRKVIQKLGRVNAQPVPH 356
>YO43_CAEEL (P34681) Hypothetical protein ZK757.3| Length = 1040 Score = 32.7 bits (73), Expect = 0.48 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +2 Query: 242 RALIARPGFGKRGNPIQLVTNHFKVSLKTTDEFFHHYYVNLKYEDDRPVD 391 R ++ARPG G G I + +N F + LK Y+V + + R +D Sbjct: 84 REVVARPGLGTIGRQIPVKSNFFAMDLKNPKMVVIQYHVEIHHPGCRKLD 133
>AGOL_ARATH (Q9SJK3) Argonaute-like protein At2g27880| Length = 997 Score = 31.6 bits (70), Expect = 1.1 Identities = 21/61 (34%), Positives = 29/61 (47%) Frame = +2 Query: 257 RPGFGKRGNPIQLVTNHFKVSLKTTDEFFHHYYVNLKYEDDRPVDGKGVGRKVIDKLQQT 436 RPG G G + + NHF V + D +HY V++ E V K V R V+ L + Sbjct: 150 RPGRGTLGKKVMVRANHFLV--QVADRDLYHYDVSINPE----VISKTVNRNVMKLLVKN 203 Query: 437 Y 439 Y Sbjct: 204 Y 204
>PDC_EMENI (P87208) Pyruvate decarboxylase (EC 4.1.1.1)| Length = 566 Score = 29.3 bits (64), Expect = 5.3 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +2 Query: 320 LKTTDEFFHHYYVNLKYEDDRPVDGKGVGRKVIDKLQQTYASDLAH 457 L T D FH YV ++Y + + KGV RKVI +L A + H Sbjct: 318 LNTID--FHTTYVRVRYSEYPDTNMKGVLRKVIQRLGFIKADPVPH 361
>CRTI_SYNP7 (P26294) Phytoene dehydrogenase (EC 1.14.99.-) (Phytoene| desaturase) Length = 474 Score = 28.9 bits (63), Expect = 6.9 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = -2 Query: 345 WKNSSVVFNETLK*LVTSCIGFPLLPKPGRAIRALL 238 WK+ S++FN+ K S FP +P P + A+L Sbjct: 79 WKSHSMIFNQPTKPGTYSRFDFPDIPAPINGVAAIL 114
>Y1775_BACSK (Q5WH45) Hypothetical protein ABC1775| Length = 374 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = -3 Query: 140 LVGEVVAVAGHHPQQHATPFGETGNSPEEPNR*TSLESMGTEMQ 9 L+G+++ +AG +P+G G +PEE R +M T+M+ Sbjct: 275 LLGKLLRMAGADAVLFPSPYGRIGINPEEAQRVKDQLTMTTQMK 318 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,814,308 Number of Sequences: 219361 Number of extensions: 1132772 Number of successful extensions: 3235 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3173 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3235 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
