Clone Name | bastl56e03 |
---|---|
Clone Library Name | barley_pub |
>IBP1_MOUSE (P47876) Insulin-like growth factor-binding protein 1 precursor| (IGFBP-1) (IBP-1) (IGF-binding protein 1) Length = 272 Score = 31.2 bits (69), Expect = 0.78 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +1 Query: 64 FPGGIVGGEGDPWHSVPCRQSSLVRVSLCCPRP 162 F G+V G PWH PC + R+ LC P P Sbjct: 18 FQIGVVAGAPQPWHCAPC---TAERLGLCPPVP 47
>HES2_MOUSE (O54792) Transcription factor HES-2 (Hairy and enhancer of split 2)| Length = 157 Score = 28.9 bits (63), Expect = 3.9 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -2 Query: 95 SPSPPTMPPGNSRPWARW 42 +PSPP PPG+S W W Sbjct: 140 APSPPVPPPGSSGLWRPW 157
>MMP24_HUMAN (Q9Y5R2) Matrix metalloproteinase-24 precursor (EC 3.4.24.-)| (MMP-24) (Membrane-type matrix metalloproteinase 5) (MT-MMP 5) (Membrane-type-5 matrix metalloproteinase) (MT5-MMP) Length = 645 Score = 28.9 bits (63), Expect = 3.9 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = -2 Query: 116 QGTECHGSPSPPTMPPGNSRPWARW 42 +G P PP PPG + W+RW Sbjct: 5 RGGRAAPGPPPPPPPPGQAPRWSRW 29
>IBP1_RAT (P21743) Insulin-like growth factor-binding protein 1 precursor| (IGFBP-1) (IBP-1) (IGF-binding protein 1) Length = 272 Score = 28.5 bits (62), Expect = 5.1 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +1 Query: 76 IVGGEGDPWHSVPCRQSSLVRVSLCCPRP 162 +V G PWH PC + R+ LC P P Sbjct: 22 VVAGAPQPWHCAPC---TAERLELCPPVP 47
>METX_DECAR (Q47JU2) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine| O-trans-acetylase) (Homoserine transacetylase) (HTA) Length = 374 Score = 27.7 bits (60), Expect = 8.6 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = -2 Query: 104 CHGSPSPPTMPPGNSRPW 51 CHGS P ++ P +PW Sbjct: 101 CHGSTGPSSLNPATGKPW 118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,305,209 Number of Sequences: 219361 Number of extensions: 515693 Number of successful extensions: 2294 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2174 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2293 length of database: 80,573,946 effective HSP length: 41 effective length of database: 71,580,145 effective search space used: 1717923480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)