Clone Name | bastl56d06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YM00_YEAST (Q04458) Hypothetical aldehyde dehydrogenase-like pro... | 30 | 3.8 | 2 | DPOD_CAEEL (P90829) DNA polymerase delta catalytic subunit (EC 2... | 28 | 8.4 |
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>YM00_YEAST (Q04458) Hypothetical aldehyde dehydrogenase-like protein in| ILV2-ADE17 intergenic region (EC 1.2.1.-) Length = 532 Score = 29.6 bits (65), Expect = 3.8 Identities = 16/60 (26%), Positives = 27/60 (45%) Frame = +1 Query: 235 VINEELPSVSEASEMQHEEHALVNLMASAKLHGFNGQAQLPMQLPSHMSVASLPLLPPQL 414 V+NE PS E ++ H A A ++ NG +P ++ + L L+PP + Sbjct: 296 VLNEFYPSFDEQTDFTRMIHEPAYKKAVASINSTNGSKIVPSKISINSDTEDLCLVPPTI 355
>DPOD_CAEEL (P90829) DNA polymerase delta catalytic subunit (EC 2.7.7.7)| Length = 1081 Score = 28.5 bits (62), Expect = 8.4 Identities = 12/23 (52%), Positives = 18/23 (78%) Frame = +1 Query: 289 EHALVNLMASAKLHGFNGQAQLP 357 + A+ N++A+AK G +GQAQLP Sbjct: 126 QSAICNMVAAAKRRGGSGQAQLP 148 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.133 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,439,394 Number of Sequences: 219361 Number of extensions: 929384 Number of successful extensions: 2056 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2010 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2055 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)