ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl56d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 266 6e-68
2gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare str... 266 6e-68
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 266 6e-68
4emb|BX248578.6| Mouse DNA sequence from clone RP23-227K23 on chr... 44 0.39
5emb|AL663066.12| Mouse DNA sequence from clone RP23-416K12 on ch... 42 1.6
6emb|AL671860.6| Mouse DNA sequence from clone RP23-252K7 on chro... 42 1.6
7emb|CR388144.17| Zebrafish DNA sequence from clone DKEY-21I17 in... 42 1.6
8gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome 40 6.2
9gb|AC153501.2| Mus musculus 10 BAC RP23-79J15 (Roswell Park Canc... 40 6.2
10gb|AF111103.1|MMHC322F16 Mouse major histocompatibility complex ... 40 6.2
11gb|AC146507.2| Homo sapiens chromosome 5 clone CTD-2301A4, compl... 40 6.2
12gb|AC143357.1| Pan troglodytes BAC clone RP43-171L24 from 7, com... 40 6.2
13gb|AC006029.2| Homo sapiens BAC clone GS1-195F7 from 7q31.2-q32,... 40 6.2
14emb|AL365217.10| Human DNA sequence from clone RP11-74E24 on chr... 40 6.2
15emb|AL161655.8| Human DNA sequence from clone RP11-116E13 on chr... 40 6.2
16emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segmen... 40 6.2
17gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 40 6.2
18gb|AC112170.2| Homo sapiens chromosome 5 clone CTD-2018G4, compl... 40 6.2
19gb|AC110005.2| Homo sapiens chromosome 5 clone RP11-265K23, comp... 40 6.2
20gb|AC160088.2| Mus musculus BAC clone RP23-134J11 from chromosom... 40 6.2
21dbj|AK046827.1| Mus musculus 10 days neonate medulla oblongata c... 40 6.2
22gb|AF111102.2|MMHC214O16 Mus musculus strain 129/SvJ chromosome ... 40 6.2
23dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
24gb|AC140179.3| Homo sapiens chromosome 5 clone RP11-933K12, comp... 40 6.2
25gb|AC087216.1|AC087216 Mus musculus strain 129svj chromosome 17 ... 40 6.2
26emb|AL590502.12| Human DNA sequence from clone RP11-144G16 on ch... 40 6.2
27emb|BX649319.8| Zebrafish DNA sequence from clone DKEYP-88E3 in ... 40 6.2
28emb|AL732521.18| Mouse DNA sequence from clone RP23-134A17 on ch... 40 6.2
29emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
30emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
31gb|AC173486.2| Mus musculus BAC clone RP23-18O16 from chromosome... 40 6.2
32emb|CR974473.23| Mouse DNA sequence from clone RP23-38P5 on chro... 40 6.2
33emb|CR974466.14| Mouse DNA sequence from clone RP23-331E12 on ch... 40 6.2
34gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete ge... 40 6.2
35gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete ge... 40 6.2
36gb|AC168066.4| Mus musculus BAC clone RP23-134F19 from chromosom... 40 6.2
37emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chr... 40 6.2

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  266 bits (134), Expect = 6e-68
 Identities = 302/358 (84%)
 Strand = Plus / Minus

                                                                           
Query: 2       ttgaaggatattctcgtggaaggcgaactagagtggtagaaatggagaagcctgtgaaca 61
               |||||||||||||||||||||| || ||| ||||||| |||||||| ||  || ||||  
Sbjct: 5753234 ttgaaggatattctcgtggaagacggactggagtggttgaaatggacaaatctttgaagg 5753175

                                                                           
Query: 62      atgattacaataacagaaggaataacttagttccagaagtgcctagcaaccacagcacta 121
                ||||||||||| |||||| || ||||| | |||||||||  |||||| ||||| |||||
Sbjct: 5753174 ttgattacaatagcagaagaaacaacttggctccagaagtttctagcagccacatcacta 5753115

                                                                           
Query: 122     aatcttcacaggatgagtcaatgtcttccatgaacagttcatctcaccctagtgcaaaag 181
               | |||||||||||||||||| ||||||| ||||||||||||||||||  |||||  ||||
Sbjct: 5753114 agtcttcacaggatgagtcagtgtcttcgatgaacagttcatctcactatagtgggaaag 5753055

                                                                           
Query: 182     cagcttctgaatcaaatagtgtttccagcagctatcatgaagacaatggttttgtaatta 241
               |||||||||| ||||| ||||| || |||||||| |  ||||| ||||||||  |||| |
Sbjct: 5753054 cagcttctgactcaaacagtgtgtcaagcagctaccgcgaagataatggtttcataatga 5752995

                                                                           
Query: 242     acgaagaacttccttctgtatctgaggcatcagagatgcagcatgaggaacatgctctag 301
               |||||||||||||||||||||||||||||||||| |  ||||| ||||| || |  ||||
Sbjct: 5752994 acgaagaacttccttctgtatctgaggcatcagataaacagcaagaggagcaagtcctag 5752935

                                                                         
Query: 302     ttaatctaatggcatcagcaaagttgcatggtttcaatggacaggctcaattgccaat 359
               ||||| ||||| ||||||| || |||||||  ||||| || || | ||||||||||||
Sbjct: 5752934 ttaatttaatgtcatcagctaaattgcatgacttcaacgggcaagttcaattgccaat 5752877



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>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0021B21, from chromosome 3, complete sequence
          Length = 166777

 Score =  266 bits (134), Expect = 6e-68
 Identities = 302/358 (84%)
 Strand = Plus / Plus

                                                                         
Query: 2     ttgaaggatattctcgtggaaggcgaactagagtggtagaaatggagaagcctgtgaaca 61
             |||||||||||||||||||||| || ||| ||||||| |||||||| ||  || ||||  
Sbjct: 77937 ttgaaggatattctcgtggaagacggactggagtggttgaaatggacaaatctttgaagg 77996

                                                                         
Query: 62    atgattacaataacagaaggaataacttagttccagaagtgcctagcaaccacagcacta 121
              ||||||||||| |||||| || ||||| | |||||||||  |||||| ||||| |||||
Sbjct: 77997 ttgattacaatagcagaagaaacaacttggctccagaagtttctagcagccacatcacta 78056

                                                                         
Query: 122   aatcttcacaggatgagtcaatgtcttccatgaacagttcatctcaccctagtgcaaaag 181
             | |||||||||||||||||| ||||||| ||||||||||||||||||  |||||  ||||
Sbjct: 78057 agtcttcacaggatgagtcagtgtcttcgatgaacagttcatctcactatagtgggaaag 78116

                                                                         
Query: 182   cagcttctgaatcaaatagtgtttccagcagctatcatgaagacaatggttttgtaatta 241
             |||||||||| ||||| ||||| || |||||||| |  ||||| ||||||||  |||| |
Sbjct: 78117 cagcttctgactcaaacagtgtgtcaagcagctaccgcgaagataatggtttcataatga 78176

                                                                         
Query: 242   acgaagaacttccttctgtatctgaggcatcagagatgcagcatgaggaacatgctctag 301
             |||||||||||||||||||||||||||||||||| |  ||||| ||||| || |  ||||
Sbjct: 78177 acgaagaacttccttctgtatctgaggcatcagataaacagcaagaggagcaagtcctag 78236

                                                                       
Query: 302   ttaatctaatggcatcagcaaagttgcatggtttcaatggacaggctcaattgccaat 359
             ||||| ||||| ||||||| || |||||||  ||||| || || | ||||||||||||
Sbjct: 78237 ttaatttaatgtcatcagctaaattgcatgacttcaacgggcaagttcaattgccaat 78294



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  266 bits (134), Expect = 6e-68
 Identities = 302/358 (84%)
 Strand = Plus / Minus

                                                                           
Query: 2       ttgaaggatattctcgtggaaggcgaactagagtggtagaaatggagaagcctgtgaaca 61
               |||||||||||||||||||||| || ||| ||||||| |||||||| ||  || ||||  
Sbjct: 5752447 ttgaaggatattctcgtggaagacggactggagtggttgaaatggacaaatctttgaagg 5752388

                                                                           
Query: 62      atgattacaataacagaaggaataacttagttccagaagtgcctagcaaccacagcacta 121
                ||||||||||| |||||| || ||||| | |||||||||  |||||| ||||| |||||
Sbjct: 5752387 ttgattacaatagcagaagaaacaacttggctccagaagtttctagcagccacatcacta 5752328

                                                                           
Query: 122     aatcttcacaggatgagtcaatgtcttccatgaacagttcatctcaccctagtgcaaaag 181
               | |||||||||||||||||| ||||||| ||||||||||||||||||  |||||  ||||
Sbjct: 5752327 agtcttcacaggatgagtcagtgtcttcgatgaacagttcatctcactatagtgggaaag 5752268

                                                                           
Query: 182     cagcttctgaatcaaatagtgtttccagcagctatcatgaagacaatggttttgtaatta 241
               |||||||||| ||||| ||||| || |||||||| |  ||||| ||||||||  |||| |
Sbjct: 5752267 cagcttctgactcaaacagtgtgtcaagcagctaccgcgaagataatggtttcataatga 5752208

                                                                           
Query: 242     acgaagaacttccttctgtatctgaggcatcagagatgcagcatgaggaacatgctctag 301
               |||||||||||||||||||||||||||||||||| |  ||||| ||||| || |  ||||
Sbjct: 5752207 acgaagaacttccttctgtatctgaggcatcagataaacagcaagaggagcaagtcctag 5752148

                                                                         
Query: 302     ttaatctaatggcatcagcaaagttgcatggtttcaatggacaggctcaattgccaat 359
               ||||| ||||| ||||||| || |||||||  ||||| || || | ||||||||||||
Sbjct: 5752147 ttaatttaatgtcatcagctaaattgcatgacttcaacgggcaagttcaattgccaat 5752090



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>emb|BX248578.6| Mouse DNA sequence from clone RP23-227K23 on chromosome 11 Contains a
            pseudogene similar to part of eukaryotic translation
            initiation factor 3, subunit 5 (epsilon) Eif3s5, complete
            sequence
          Length = 160629

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 159  ttcatctcaccctagtgcaaaa 180
            ||||||||||||||||||||||
Sbjct: 6977 ttcatctcaccctagtgcaaaa 6998



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>emb|AL663066.12| Mouse DNA sequence from clone RP23-416K12 on chromosome 11 Contains the
             5' end of a novel genes, an H+ transporting ATPase V1
             subunit G isoform 1 (Atp6v1g1) pseudogene, an upstream
             transcription factor 1 (Usf1) pseudogene, the 5' end of
             the Ssh2 gene for slingshot homolog 2 (Drosophila) and a
             CpG island, complete sequence
          Length = 160589

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 155   acagttcatctcaccctagtgcaaa 179
             |||||||||||||||||||| ||||
Sbjct: 18910 acagttcatctcaccctagtccaaa 18886



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>emb|AL671860.6| Mouse DNA sequence from clone RP23-252K7 on chromosome X, complete
              sequence
          Length = 185369

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 188    ctgaatcaaatagtgtttcca 208
              |||||||||||||||||||||
Sbjct: 112215 ctgaatcaaatagtgtttcca 112235



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>emb|CR388144.17| Zebrafish DNA sequence from clone DKEY-21I17 in linkage group 14,
             complete sequence
          Length = 211706

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 407   cacagcttttcctcaaaacct 427
             |||||||||||||||||||||
Sbjct: 74397 cacagcttttcctcaaaacct 74417



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>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome
          Length = 1796226

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    tcttccatgaacagttcatc 164
              ||||||||||||||||||||
Sbjct: 720668 tcttccatgaacagttcatc 720649



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>gb|AC153501.2| Mus musculus 10 BAC RP23-79J15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 251631

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     aaatggagaagcctgtgaac 60
              ||||||||||||||||||||
Sbjct: 128045 aaatggagaagcctgtgaac 128064



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>gb|AF111103.1|MMHC322F16 Mouse major histocompatibility complex region containing the Q region
             of class I
          Length = 159179

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    agaaatggagaagcctgtga 58
             ||||||||||||||||||||
Sbjct: 21140 agaaatggagaagcctgtga 21121



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>gb|AC146507.2| Homo sapiens chromosome 5 clone CTD-2301A4, complete sequence
          Length = 144503

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    caaaagcagcttctgaatca 195
              ||||||||||||||||||||
Sbjct: 113329 caaaagcagcttctgaatca 113310



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>gb|AC143357.1| Pan troglodytes BAC clone RP43-171L24 from 7, complete sequence
          Length = 181482

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 305    atctaatggcatcagcaaagttgc 328
              |||||||||| |||||||||||||
Sbjct: 127181 atctaatggcttcagcaaagttgc 127204



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>gb|AC006029.2| Homo sapiens BAC clone GS1-195F7 from 7q31.2-q32, complete sequence
          Length = 143851

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 305   atctaatggcatcagcaaagttgc 328
             |||||||||| |||||||||||||
Sbjct: 50889 atctaatggcttcagcaaagttgc 50912



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>emb|AL365217.10| Human DNA sequence from clone RP11-74E24 on chromosome 6 Contains a
             KIAA0663 pseudogene and part of the gene for a novel
             EGF-like domain containing protein, complete sequence
          Length = 104957

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   tcatctcaccctagtgcaaa 179
             ||||||||||||||||||||
Sbjct: 80203 tcatctcaccctagtgcaaa 80184



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>emb|AL161655.8| Human DNA sequence from clone RP11-116E13 on chromosome 20 Contains
             part of a novel gene, GSSs and STSs, complete sequence
          Length = 105191

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   tttcctcaaaaccttttgcc 433
             ||||||||||||||||||||
Sbjct: 41097 tttcctcaaaaccttttgcc 41116



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>emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segment 3/7
          Length = 347365

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 341    gacaggctcaattgccaatg 360
              ||||||||||||||||||||
Sbjct: 343102 gacaggctcaattgccaatg 343121



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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 251    ttccttctgtatctgaggca 270
              ||||||||||||||||||||
Sbjct: 178091 ttccttctgtatctgaggca 178072



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>gb|AC112170.2| Homo sapiens chromosome 5 clone CTD-2018G4, complete sequence
          Length = 76631

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   caaaagcagcttctgaatca 195
             ||||||||||||||||||||
Sbjct: 33685 caaaagcagcttctgaatca 33704



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>gb|AC110005.2| Homo sapiens chromosome 5 clone RP11-265K23, complete sequence
          Length = 184157

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   caaaagcagcttctgaatca 195
             ||||||||||||||||||||
Sbjct: 27915 caaaagcagcttctgaatca 27934



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>gb|AC160088.2| Mus musculus BAC clone RP23-134J11 from chromosome 19, complete sequence
          Length = 221101

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    ggcatcagagatgcagcatg 286
              ||||||||||||||||||||
Sbjct: 117076 ggcatcagagatgcagcatg 117095



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>dbj|AK046827.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN
            full-length enriched library, clone:B830016I19
            product:unclassifiable, full insert sequence
          Length = 3927

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  ttccagcagctatcatgaag 223
            ||||||||||||||||||||
Sbjct: 2788 ttccagcagctatcatgaag 2769



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>gb|AF111102.2|MMHC214O16 Mus musculus strain 129/SvJ chromosome 17 clone BAC 214O16, complete
              sequence
          Length = 158443

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     agaaatggagaagcctgtga 58
              ||||||||||||||||||||
Sbjct: 150815 agaaatggagaagcctgtga 150796



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     agaaatggagaagcctgtga 58
              ||||||||||||||||||||
Sbjct: 120706 agaaatggagaagcctgtga 120687



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    agaaatggagaagcctgtga 58
             ||||||||||||||||||||
Sbjct: 78814 agaaatggagaagcctgtga 78795



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 397    ttactgcctccacagctttt 416
              ||||||||||||||||||||
Sbjct: 390208 ttactgcctccacagctttt 390227



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>gb|AC140179.3| Homo sapiens chromosome 5 clone RP11-933K12, complete sequence
          Length = 215808

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  caaaagcagcttctgaatca 195
            ||||||||||||||||||||
Sbjct: 5916 caaaagcagcttctgaatca 5897



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>gb|AC087216.1|AC087216 Mus musculus strain 129svj chromosome 17 clone GS1-11M9, complete
             sequence
          Length = 226594

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    agaaatggagaagcctgtga 58
             ||||||||||||||||||||
Sbjct: 66395 agaaatggagaagcctgtga 66376



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    agaaatggagaagcctgtga 58
             ||||||||||||||||||||
Sbjct: 21199 agaaatggagaagcctgtga 21180



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>emb|AL590502.12| Human DNA sequence from clone RP11-144G16 on chromosome 10, complete
              sequence
          Length = 175583

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    ttttcctcaaaaccttttgc 432
              ||||||||||||||||||||
Sbjct: 172455 ttttcctcaaaaccttttgc 172436



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>emb|BX649319.8| Zebrafish DNA sequence from clone DKEYP-88E3 in linkage group 20,
             complete sequence
          Length = 108164

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   tccacagcttttcctcaaaa 424
             ||||||||||||||||||||
Sbjct: 11679 tccacagcttttcctcaaaa 11660



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>emb|AL732521.18| Mouse DNA sequence from clone RP23-134A17 on chromosome 4, complete
              sequence
          Length = 207223

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    ttccagcagctatcatgaag 223
              ||||||||||||||||||||
Sbjct: 158503 ttccagcagctatcatgaag 158522



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>emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004G23,
             complete sequence
          Length = 115972

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 397   ttactgcctccacagctttt 416
             ||||||||||||||||||||
Sbjct: 74867 ttactgcctccacagctttt 74886



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>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13,
             complete sequence
          Length = 130249

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 397   ttactgcctccacagctttt 416
             ||||||||||||||||||||
Sbjct: 28960 ttactgcctccacagctttt 28979



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>gb|AC173486.2| Mus musculus BAC clone RP23-18O16 from chromosome 16, complete sequence
          Length = 208322

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    gtggtagaaatggagaagcctgtg 57
             ||||||||||||||| ||||||||
Sbjct: 87887 gtggtagaaatggagcagcctgtg 87864



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>emb|CR974473.23| Mouse DNA sequence from clone RP23-38P5 on chromosome 17, complete
             sequence
          Length = 219471

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    agaaatggagaagcctgtga 58
             ||||||||||||||||||||
Sbjct: 20454 agaaatggagaagcctgtga 20435



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>emb|CR974466.14| Mouse DNA sequence from clone RP23-331E12 on chromosome 17, complete
              sequence
          Length = 210806

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     agaaatggagaagcctgtga 58
              ||||||||||||||||||||
Sbjct: 201255 agaaatggagaagcctgtga 201236



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     agaaatggagaagcctgtga 58
              ||||||||||||||||||||
Sbjct: 156055 agaaatggagaagcctgtga 156036



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>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 64      gattacaataacagaaggaataac 87
               |||||||| |||||||||||||||
Sbjct: 1258500 gattacaaaaacagaaggaataac 1258523



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>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome
          Length = 1796846

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    tcttccatgaacagttcatc 164
              ||||||||||||||||||||
Sbjct: 722402 tcttccatgaacagttcatc 722383



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>gb|AC168066.4| Mus musculus BAC clone RP23-134F19 from chromosome 16, complete
             sequence
          Length = 198238

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 34    gtggtagaaatggagaagcctgtg 57
             ||||||||||||||| ||||||||
Sbjct: 65745 gtggtagaaatggagcagcctgtg 65768



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>emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chromosome 2, complete
              sequence
          Length = 224038

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    ctgaggcatcagagatgcag 282
              ||||||||||||||||||||
Sbjct: 122631 ctgaggcatcagagatgcag 122650


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,349,522
Number of Sequences: 3902068
Number of extensions: 4349522
Number of successful extensions: 83403
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83200
Number of HSP's gapped (non-prelim): 200
length of query: 457
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 435
effective length of database: 17,147,199,772
effective search space: 7459031900820
effective search space used: 7459031900820
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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