ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl56d03 |
|---|---|
| Clone Library Name | barley_pub |
>ACA1_ARATH (Q37145) Calcium-transporting ATPase 1, chloroplast precursor (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) Length = 1020 Score = 187 bits (475), Expect = 1e-47 Identities = 91/124 (73%), Positives = 106/124 (85%) Frame = +2 Query: 71 MESYLNENFGGVKPKHSSDEALGRWRKVVGVVKNPKRRFRFTANLGKRSEAAAMKRTNQE 250 MESYLNENFG VKPK+SSDEAL RWRK+ +VKNPKRRFRFTANL KRSEA A++R+NQE Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60 Query: 251 KLRVAVLVSKAALQFIHGLAPQSEYTVPAAIKAAGYGICAEELSSVVESHDLKKLKVHGG 430 K RVAVLVS+AALQFI+ L SEYT+P ++ AG+ IC +EL S+VE HDLKKLK+HGG Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120 Query: 431 TEGL 442 TEGL Sbjct: 121 TEGL 124
>ACA2_ARATH (O81108) Calcium-transporting ATPase 2, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 2) Length = 1014 Score = 182 bits (461), Expect = 4e-46 Identities = 92/124 (74%), Positives = 106/124 (85%) Frame = +2 Query: 71 MESYLNENFGGVKPKHSSDEALGRWRKVVGVVKNPKRRFRFTANLGKRSEAAAMKRTNQE 250 MESYLNENF VK KHSS+E L +WR + GVVKNPKRRFRFTANL KR EAAAM+RTNQE Sbjct: 1 MESYLNENFD-VKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59 Query: 251 KLRVAVLVSKAALQFIHGLAPQSEYTVPAAIKAAGYGICAEELSSVVESHDLKKLKVHGG 430 KLR+AVLVSKAA QFI G++P S+YTVP +KAAG+ ICA+EL S+VESHD+KKLK HGG Sbjct: 60 KLRIAVLVSKAAFQFISGVSP-SDYTVPEDVKAAGFEICADELGSIVESHDVKKLKFHGG 118 Query: 431 TEGL 442 +GL Sbjct: 119 VDGL 122
>ACA7_ARATH (O64806) Putative calcium-transporting ATPase 7, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 7) Length = 1015 Score = 174 bits (442), Expect = 7e-44 Identities = 88/124 (70%), Positives = 102/124 (82%) Frame = +2 Query: 71 MESYLNENFGGVKPKHSSDEALGRWRKVVGVVKNPKRRFRFTANLGKRSEAAAMKRTNQE 250 MESYLN NF VK KHSS+E L +WR + VVKNPKRRFRFTANL KR EAAAM+RTNQE Sbjct: 1 MESYLNSNFD-VKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59 Query: 251 KLRVAVLVSKAALQFIHGLAPQSEYTVPAAIKAAGYGICAEELSSVVESHDLKKLKVHGG 430 KLR+AVLVSKAA QFI G++P S+Y VP +KAAG+ ICA+EL S+VE HD+KKLK HGG Sbjct: 60 KLRIAVLVSKAAFQFISGVSP-SDYKVPEEVKAAGFDICADELGSIVEGHDVKKLKFHGG 118 Query: 431 TEGL 442 +GL Sbjct: 119 VDGL 122
>ACA11_ARATH (Q9M2L4) Putative calcium-transporting ATPase 11, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 11) Length = 1025 Score = 87.8 bits (216), Expect = 1e-17 Identities = 52/113 (46%), Positives = 68/113 (60%) Frame = +2 Query: 104 VKPKHSSDEALGRWRKVVGVVKNPKRRFRFTANLGKRSEAAAMKRTNQEKLRVAVLVSKA 283 V K+ S EA RWR VG+VKN RRFR +NL K +E + QEK+RV V KA Sbjct: 10 VASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQEKIRVVFYVQKA 69 Query: 284 ALQFIHGLAPQSEYTVPAAIKAAGYGICAEELSSVVESHDLKKLKVHGGTEGL 442 A QFI A + EY + +K AG+ + A+EL+S+V +HD K L GG EG+ Sbjct: 70 AFQFIDAGA-RPEYKLTDEVKKAGFYVEADELASMVRNHDTKSLTKIGGPEGI 121
>ACA4_ARATH (O22218) Calcium-transporting ATPase 4, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 4) Length = 1030 Score = 84.0 bits (206), Expect = 2e-16 Identities = 51/113 (45%), Positives = 66/113 (58%) Frame = +2 Query: 104 VKPKHSSDEALGRWRKVVGVVKNPKRRFRFTANLGKRSEAAAMKRTNQEKLRVAVLVSKA 283 V+ K+ S EA RWR V +VKN RRFR +L K ++ K QEK+RVA V KA Sbjct: 10 VEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQEKIRVAFFVQKA 69 Query: 284 ALQFIHGLAPQSEYTVPAAIKAAGYGICAEELSSVVESHDLKKLKVHGGTEGL 442 AL FI A + EY + +K AG+ I A+EL+S+V +D K L GG E L Sbjct: 70 ALHFIDA-AARPEYKLTDEVKKAGFSIEADELASMVRKNDTKSLAQKGGVEEL 121
>ACA8_ARATH (Q9LF79) Calcium-transporting ATPase 8, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 8) Length = 1074 Score = 55.8 bits (133), Expect = 5e-08 Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 7/146 (4%) Frame = +2 Query: 26 LVERRDGRRAAGTPAMESYLNENFGG------VKPKHSSDEALGRWRKVVGVVKNPKRRF 187 L++ GRR G +ES +E+ + K++S E L +WRK +V N RRF Sbjct: 4 LLKSSPGRRRGGD--VESGKSEHADSDSDTFYIPSKNASIERLQQWRKAA-LVLNASRRF 60 Query: 188 RFTANLGKRSEAAAMKRTNQEKLRVAVLVSKAALQFIH-GLAPQSEYTVPAAIKAAGYGI 364 R+T +L K E M+ +K+R AA +F+ G E T A A +GI Sbjct: 61 RYTLDLKKEQETREMR----QKIRSHAHALLAANRFMDMGRESGVEKTTGPATPAGDFGI 116 Query: 365 CAEELSSVVESHDLKKLKVHGGTEGL 442 E+L + + H+ L+ +GGT+GL Sbjct: 117 TPEQLVIMSKDHNSGALEQYGGTQGL 142
>ACA10_ARATH (Q9SZR1) Putative calcium-transporting ATPase 10, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 10) Length = 1069 Score = 49.3 bits (116), Expect = 4e-06 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 3/132 (2%) Frame = +2 Query: 56 AGTPAMESYLNENFGGVKPKHSSDEALGRWRKVVGVVKNPKRRFRFTANLGKRSEAAAM- 232 AGT + Y + F K++ E L RWR+ +V N RRFR+T +L + + M Sbjct: 18 AGTSSFTEYEDSPFDIASTKNAPVERLRRWRQ-AALVLNASRRFRYTLDLKREEDKKQML 76 Query: 233 --KRTNQEKLRVAVLVSKAALQFIHGLAPQSEYTVPAAIKAAGYGICAEELSSVVESHDL 406 R + + +R A L KAA + G+A S P +GI E++ S+ ++ Sbjct: 77 RKMRAHAQAIRAAHLF-KAAASRVTGIA--SPLPTPG---GGDFGIGQEQIVSISRDQNI 130 Query: 407 KKLKVHGGTEGL 442 L+ GG GL Sbjct: 131 GALQELGGVRGL 142
>ACA9_ARATH (Q9LU41) Putative calcium-transporting ATPase 9, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9) Length = 1073 Score = 47.0 bits (110), Expect = 2e-05 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 3/113 (2%) Frame = +2 Query: 113 KHSSDEALGRWRKVVGVVKNPKRRFRFTANLGKRSEAAAMKRTNQEKLRVAVLVSKAALQ 292 K++S E+L RWR+ +V N RRFR+T +L K +R +R V +AAL Sbjct: 38 KNASVESLRRWRQAA-LVLNASRRFRYTLDLNKEEHYDNRRR----MIRAHAQVIRAALL 92 Query: 293 FIHGLAPQSEYTVPAAIKAAGYG---ICAEELSSVVESHDLKKLKVHGGTEGL 442 F LA + + ++ AA G I E+L S+ + ++ L+ +GG +G+ Sbjct: 93 F--KLAGEQQIAFGSSTPAASTGNFDIDLEKLVSMTRNQNMSNLQQYGGVKGV 143
>TULP1_MOUSE (Q9Z273) Tubby-related protein 1 (Tubby-like protein 1)| Length = 543 Score = 32.0 bits (71), Expect = 0.73 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Frame = +1 Query: 145 AQGRR-RRQEPQAPLPLHRQPRQAIRGRRHEADQPGEAA 258 AQG++ R+++P+ P L +PR+A GRR + P ++A Sbjct: 36 AQGQKLRKKKPETPDSLESKPRKAGAGRRKHEEPPADSA 74
>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch| 3) [Contains: Notch 3 extracellular truncation; Notch 3 intracellular domain] Length = 2321 Score = 31.2 bits (69), Expect = 1.2 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Frame = +1 Query: 247 GEAACCCACFKGCTSVHPWSCSPERVHSPCRHQGSRL----RYLCR 372 G A+ CAC G T S E PCRH G L +YLCR Sbjct: 562 GIASFSCACAPGYTGTRCESQVDECRSQPCRHGGKCLDLVDKYLCR 607
>MSX1_CHICK (P28361) Homeobox protein MSX-1 (Msh homeobox 1-like protein)| (CHOX-7) Length = 249 Score = 30.8 bits (68), Expect = 1.6 Identities = 34/102 (33%), Positives = 40/102 (39%), Gaps = 13/102 (12%) Frame = +1 Query: 73 GELPQRELRGRQAQALVRRGAGPMAQGRRRRQEPQA-------------PLPLHRQPRQA 213 G P E RGRQ RR G A RR Q ++ PLP+ R QA Sbjct: 24 GSWPTAE-RGRQ-----RRSRGFRAPSRRPSQPRRSDDGGTDVAAPSRRPLPVRRGAGQA 77 Query: 214 IRGRRHEADQPGEAACCCACFKGCTSVHPWSCSPERVHSPCR 339 RGR ++ +P EA G T PW SP P R Sbjct: 78 ARGRAAQSREPREA--------GAT---PWMQSPRFSPPPPR 108
>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 30.4 bits (67), Expect = 2.1 Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 12/82 (14%) Frame = +1 Query: 43 RQESSRDARHGELPQRELRGRQAQALVR-----------RGAGPMAQGRRRRQEPQAP-L 186 R E+ R A GEL RE RGR ++ + RG GP +G RR +P Sbjct: 873 RAEALR-AEGGELGPREERGRPRRSRSKEAPGAPEVRSDRGRGPCPEGGRRHHRRGSPEE 931 Query: 187 PLHRQPRQAIRGRRHEADQPGE 252 R+PR+ R RH D PG+ Sbjct: 932 AAEREPRRH-RAHRHGPD-PGK 951
>NOTC3_RAT (Q9R172) Neurogenic locus notch homolog protein 3 precursor (Notch| 3) [Contains: Notch 3 extracellular truncation; Notch 3 intracellular domain] Length = 2319 Score = 30.0 bits (66), Expect = 2.8 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = +1 Query: 247 GEAACCCACFKGCTSVHPWSCSPERVHSPCRHQGSRL----RYLCR 372 G A+ CAC G T + S E PCR+ G L +YLCR Sbjct: 564 GIASFSCACAPGYTGIRCESQVDECRSQPCRYGGKCLDLVDKYLCR 609
>KRA55_HUMAN (Q701N2) Keratin-associated protein 5-5 (Keratin-associated protein| 5.5) (Ultrahigh sulfur keratin-associated protein 5.5) (Keratin-associated protein 5-11) (Keratin-associated protein 5.11) Length = 221 Score = 30.0 bits (66), Expect = 2.8 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Frame = +1 Query: 250 EAACC--CACFKGCTSVHPWSCSPERVHSPCRHQGS 351 +++CC C+CF GC S SC + PC Q S Sbjct: 179 QSSCCKPCSCFSGCGS----SCCQSSCYKPCCCQSS 210
>NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 precursor (Notch| 3) [Contains: Notch 3 extracellular truncation; Notch 3 intracellular domain] Length = 2318 Score = 30.0 bits (66), Expect = 2.8 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = +1 Query: 247 GEAACCCACFKGCTSVHPWSCSPERVHSPCRHQGSRL----RYLCR 372 G A+ CAC G T + S E PCR+ G L +YLCR Sbjct: 563 GIASFSCACAPGYTGIRCESQVDECRSQPCRYGGKCLDLVDKYLCR 608
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 29.6 bits (65), Expect = 3.6 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Frame = +1 Query: 46 QESSRDARHGELPQRELRGRQAQALVRRGAGPMAQGRRRRQEPQ---APLPLHRQPRQAI 216 Q+SS D+ + E R ++ V+ G GRRRR P +P P RQ + Sbjct: 490 QQSSSDSGSSSSSEDE---RPKRSHVKNGE----VGRRRRHSPSRSASPSPRKRQKETSP 542 Query: 217 RGRRHEADQP 246 RGRR + P Sbjct: 543 RGRRRRSPSP 552
>SYE_STRAW (Q82JR3) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 504 Score = 29.6 bits (65), Expect = 3.6 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +2 Query: 5 CYIDTAELVERRDGRRAAGTPA 70 CY T EL RRD RAAG P+ Sbjct: 122 CYCSTEELDTRRDAARAAGKPS 143
>SALL2_HUMAN (Q9Y467) Sal-like protein 2 (Zinc finger protein SALL2) (HSal2)| Length = 1007 Score = 29.3 bits (64), Expect = 4.7 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Frame = +1 Query: 154 RRRRQEPQAPLPLHRQPRQAIRGRRHEADQPGEAACCCACFKGCTS--VHPWSCSPE 318 RR++++PQ + P + G E D P A CCA F T H +CS + Sbjct: 3 RRKQRKPQQLISDCEGPSASENGDASEEDHPQVCAKCCAQFTDPTEFLAHQNACSTD 59
>UL93_HCMVA (P16799) Protein UL93| Length = 594 Score = 29.3 bits (64), Expect = 4.7 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +1 Query: 127 RGAGPMAQGRRRRQEPQAPLPLHRQPRQAIRGRRHEADQPGE 252 RGA AQ RR++E AP +P++ + G R+E+ P E Sbjct: 434 RGAAAAAQRARRQRERSAP-----KPQELLFGPRNESGPPAE 470
>TENS1_BOVIN (Q9GLM4) Tensin-1| Length = 1715 Score = 29.3 bits (64), Expect = 4.7 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +1 Query: 76 ELPQRELRGRQAQALVRRGAGPMAQGRRRRQEPQAPLPLHRQ 201 +LP RG ++ V+RG Q ++++Q+ Q P P RQ Sbjct: 628 QLPPAPARGGSSREAVQRGLNSWQQQQQQQQQQQQPRPPPRQ 669
>FANCE_HUMAN (Q9HB96) Fanconi anemia group E protein (Protein FACE)| Length = 536 Score = 29.3 bits (64), Expect = 4.7 Identities = 21/62 (33%), Positives = 28/62 (45%) Frame = +1 Query: 73 GELPQRELRGRQAQALVRRGAGPMAQGRRRRQEPQAPLPLHRQPRQAIRGRRHEADQPGE 252 G P E RQ Q+L R + G RR + PQAP P + R + + + D E Sbjct: 152 GASPLSERCQRQLQSLCRG----LGLGGRRLKSPQAPDPEEEENRDSQQPGKRRKDSEEE 207 Query: 253 AA 258 AA Sbjct: 208 AA 209
>NETR_TRAPH (Q5G266) Neurotrypsin precursor (EC 3.4.21.-)| Length = 875 Score = 29.3 bits (64), Expect = 4.7 Identities = 17/54 (31%), Positives = 21/54 (38%) Frame = +1 Query: 154 RRRRQEPQAPLPLHRQPRQAIRGRRHEADQPGEAACCCACFKGCTSVHPWSCSP 315 R R P PLP +P +A+ +R A Q G HPW C P Sbjct: 52 RPPRTRPPPPLPRFSRPPRALLAQRPHALQAGHTP----------RRHPWGCPP 95
>DEND_HUMAN (O94850) Dendrin| Length = 657 Score = 29.3 bits (64), Expect = 4.7 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +1 Query: 82 PQRELRGRQAQALVRRGAGPMAQGRRRRQEPQAPLPLHRQPRQAIRGRR 228 P+R R Q AGP+A+ R R QE + R+ ++ R RR Sbjct: 28 PRRPWASRVLQEATNWRAGPLAEVRAREQEKRKAASQEREAKETERKRR 76
>HAIR_HUMAN (O43593) Protein hairless| Length = 1189 Score = 28.9 bits (63), Expect = 6.2 Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 13/110 (11%) Frame = +1 Query: 46 QESSRDARHGELPQRELRGRQAQALVRRGAGP---MAQGRRRRQEP---QAPLPLHRQPR 207 Q+ R GEL Q E + + G+GP ++ G + L R+ R Sbjct: 515 QQVRRSPLGGELQQEEDTATNSSSEEGPGSGPDSRLSTGLAKHLLSGLGDRLCRLLRRER 574 Query: 208 QAIRGRRHEA-------DQPGEAACCCACFKGCTSVHPWSCSPERVHSPC 336 +A+ + E D PG CC C G + H W C P H C Sbjct: 575 EALAWAQREGQGPAVTEDSPGIPRCCSRCHHGLFNTH-WRC-PRCSHRLC 622
>CTDP1_HUMAN (Q9Y5B0) RNA polymerase II subunit A C-terminal domain phosphatase| (EC 3.1.3.16) (TFIIF-associating CTD phosphatase) Length = 961 Score = 28.9 bits (63), Expect = 6.2 Identities = 27/83 (32%), Positives = 33/83 (39%), Gaps = 4/83 (4%) Frame = +1 Query: 49 ESSRDARHGELPQRELRGRQAQALVRRGAGPMAQGRRRRQ-EPQAP-LPLHRQPRQAIRG 222 +SS A GE + RGRQ GAG +AQG P AP LP +P Sbjct: 468 KSSSSASDGESEGK--RGRQKPKAAPEGAGALAQGSSLEPGRPAAPSLPGEAEPGAHAPD 525 Query: 223 RRHE--ADQPGEAACCCACFKGC 285 + E + GE C GC Sbjct: 526 KEPELGGQEEGERDGLCGLGNGC 548
>PGKH_TOBAC (Q42961) Phosphoglycerate kinase, chloroplast precursor (EC| 2.7.2.3) Length = 481 Score = 28.9 bits (63), Expect = 6.2 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 14/78 (17%) Frame = +2 Query: 80 YLNENFGGVKPKHSSDEALGRWRK--------------VVGVVKNPKRRFRFTANLGKRS 217 Y+N+ FG H+S E + ++ K +VG V NPKR F K S Sbjct: 219 YVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVS 278 Query: 218 EAAAMKRTNQEKLRVAVL 271 + + EK + +L Sbjct: 279 SKIGVIESLLEKCDILLL 296
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 28.9 bits (63), Expect = 6.2 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +1 Query: 49 ESSRDARHGELPQRELRGRQAQALVRRGAGPMAQGRRRRQEPQAPLPLHRQ 201 E+S D + P++E R A+A GP +GRRR + P AP P R+ Sbjct: 241 ETSTDNSSAQAPRQE-DSRPARAR----PGPPTRGRRRGRRPAAPGPASRR 286
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 28.9 bits (63), Expect = 6.2 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +1 Query: 49 ESSRDARHGELPQRELRGRQAQALVRRGAGPMAQGRRRRQEPQAPLPLHRQ 201 E+S D + P++E R A+A GP +GRRR + P AP P R+ Sbjct: 241 ETSTDNSSAQAPRQE-DSRPARAR----PGPPTRGRRRGRRPAAPGPASRR 286
>PGKH_ARATH (P50318) Phosphoglycerate kinase, chloroplast precursor (EC| 2.7.2.3) Length = 478 Score = 28.9 bits (63), Expect = 6.2 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 14/78 (17%) Frame = +2 Query: 80 YLNENFGGVKPKHSSDEALGRWRK--------------VVGVVKNPKRRFRFTANLGKRS 217 Y+N+ FG H+S E + ++ K +VG V NPKR F K S Sbjct: 217 YVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVS 276 Query: 218 EAAAMKRTNQEKLRVAVL 271 + + EK + +L Sbjct: 277 SKIGVIESLLEKCDILLL 294
>PAHO_CAVPO (P13083) Pancreatic prohormone precursor (Pancreatic polypeptide)| (PP) [Contains: Pancreatic hormone; Pancreatic icosapeptide-like] Length = 126 Score = 28.9 bits (63), Expect = 6.2 Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 7/82 (8%) Frame = +1 Query: 106 QAQALVRRGAGPMAQGR--RRRQEPQAPLPLHRQPRQAIRGRRHEADQPGEAACCCACFK 279 Q A +RR + + R + +E LP+ RQ A G H G A K Sbjct: 45 QYAAEMRRYINMLTRPRYGKSAEEDALGLPVWRQSHAAAPGGSHRHPPAGLPAA-----K 99 Query: 280 GCTSVH-----PWSCSPERVHS 330 G T V PW C P R HS Sbjct: 100 GGTGVSGSPPKPWDCLPCRAHS 121
>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2505 Score = 28.9 bits (63), Expect = 6.2 Identities = 21/61 (34%), Positives = 27/61 (44%) Frame = +1 Query: 49 ESSRDARHGELPQRELRGRQAQALVRRGAGPMAQGRRRRQEPQAPLPLHRQPRQAIRGRR 228 ++ R ARH E R RG + + G GP RRRR AP R+ + RR Sbjct: 973 KAERRARHRE-GSRPARGGEGE-----GEGPDGGERRRRHRHGAPATYEGDARREDKERR 1026 Query: 229 H 231 H Sbjct: 1027 H 1027
>PGKH_SPIOL (P29409) Phosphoglycerate kinase, chloroplast precursor (EC| 2.7.2.3) (Fragment) Length = 433 Score = 28.9 bits (63), Expect = 6.2 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 14/78 (17%) Frame = +2 Query: 80 YLNENFGGVKPKHSSDEALGRWRK--------------VVGVVKNPKRRFRFTANLGKRS 217 Y+N+ FG H+S E + ++ K +VG V NPKR F K S Sbjct: 172 YVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVS 231 Query: 218 EAAAMKRTNQEKLRVAVL 271 + + EK + +L Sbjct: 232 SKIGVIESLLEKCDILLL 249
>COOS1_CARHZ (P59934) Carbon monoxide dehydrogenase 1 (EC 1.2.99.2) (CODH 1)| Length = 635 Score = 28.5 bits (62), Expect = 8.1 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%) Frame = +1 Query: 184 LPLHRQPRQAIRGRRHEADQP----GEAACCCA-CFKGCTSVHPWSCSPER 321 LP+ ++ R+EA QP GE CC C+KG + P+ P+R Sbjct: 15 LPIAKKAGIETAWDRYEAMQPQCGFGELGVCCRICWKGPCRIDPFGNGPQR 65
>PHLPL_HUMAN (Q6ZVD8) PH domain leucine-rich repeat protein phosphatase-like (EC| 3.1.3.16) Length = 1323 Score = 28.5 bits (62), Expect = 8.1 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Frame = +1 Query: 112 QALVRRGAGPMAQGRRRRQEPQAPLPLHRQPRQAIRGRRHEA----DQPGEAACCCACFK 279 QA++ RG P+ + L + P +A R + +A D CC Sbjct: 902 QAVLCRGGKPVPLSK--------VFSLEQDPEEAQRVKDQKAIITEDNKVNGVTCCTRML 953 Query: 280 GCTSVHPW 303 GCT ++PW Sbjct: 954 GCTYLYPW 961
>GSP_CRIFA (P90518) Glutathionylspermidine synthase (EC 6.3.1.8)| Length = 719 Score = 28.5 bits (62), Expect = 8.1 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +2 Query: 248 EKLRVAVLVSKAALQFIHGLAPQSEYTVPAA 340 E L AV SKA L F+H LAP E+ + A+ Sbjct: 534 EPLWKAVTGSKAILPFMHALAPDHEHMLAAS 564
>SERA_BACSU (P35136) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 525 Score = 28.5 bits (62), Expect = 8.1 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +2 Query: 239 TNQEKLRVAVLVSKAALQFIHGLAPQSEYTVPAAIK 346 T + +L VA VS+ LQF GL S +PA K Sbjct: 281 TKEAQLNVAAQVSEEVLQFAKGLPVMSAINLPAMTK 316
>HAIR_MOUSE (Q61645) Protein hairless| Length = 1182 Score = 28.5 bits (62), Expect = 8.1 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 7/48 (14%) Frame = +1 Query: 190 LHRQPRQAIRGRRHEA-------DQPGEAACCCACFKGCTSVHPWSCS 312 L R+ R+A+ + E D PG CC C G + H W CS Sbjct: 564 LLRKEREALAWAQREGQGPAMTEDSPGIPHCCSRCHHGLFNTH-WRCS 610
>HAIR_RAT (P97609) Protein hairless| Length = 1181 Score = 28.5 bits (62), Expect = 8.1 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 7/48 (14%) Frame = +1 Query: 190 LHRQPRQAIRGRRHEA-------DQPGEAACCCACFKGCTSVHPWSCS 312 L R+ R+A+ + E D PG CC C G + H W CS Sbjct: 563 LLRKEREALAWAQREGQGPAMTEDSPGIPHCCSRCHHGLFNTH-WRCS 609
>FGRL1_HUMAN (Q8N441) Fibroblast growth factor receptor-like 1 precursor (FGF| receptor-like protein 1) (Fibroblast growth factor receptor 5) (FGFR-like protein) (FGF homologous factor receptor) Length = 504 Score = 28.5 bits (62), Expect = 8.1 Identities = 22/71 (30%), Positives = 28/71 (39%) Frame = +1 Query: 145 AQGRRRRQEPQAPLPLHRQPRQAIRGRRHEADQPGEAACCCACFKGCTSVHPWSCSPERV 324 AQ + P PLP HR P A R R + D P AA G H +P+ + Sbjct: 401 AQKKPCTPAPAPPLPGHRPPGTA-RDRSGDKDLPSLAALSAGPGVGLCEEHGSPAAPQHL 459 Query: 325 HSPCRHQGSRL 357 P G +L Sbjct: 460 LGPGPVAGPKL 470 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,610,568 Number of Sequences: 219361 Number of extensions: 1152157 Number of successful extensions: 4942 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 4677 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4920 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
