ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl56c12 |
|---|---|
| Clone Library Name | barley_pub |
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 118 bits (296), Expect = 5e-27 Identities = 57/91 (62%), Positives = 62/91 (68%) Frame = +2 Query: 158 LVAGSHNRNELVVIRRDGEPGARPPKQQNRGACQICXXXXXXXXXXXXFVACNECAFPVC 337 LVAGSHNRNELVVI EP +P K + C+IC FVACNEC FP C Sbjct: 7 LVAGSHNRNELVVIHNHEEP--KPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPAC 64 Query: 338 RDCYEYERREGTQDCPQCKTRYKRLKGCARV 430 R CYEYERREGTQ+CPQCKTRYKRL+G RV Sbjct: 65 RPCYEYERREGTQNCPQCKTRYKRLRGSPRV 95
>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC| 2.4.1.12) (AtCesA-5) Length = 1069 Score = 117 bits (294), Expect = 9e-27 Identities = 54/91 (59%), Positives = 60/91 (65%) Frame = +2 Query: 158 LVAGSHNRNELVVIRRDGEPGARPPKQQNRGACQICXXXXXXXXXXXXFVACNECAFPVC 337 L+AGSHNRNE V+I D R ++ + CQIC FVACNECAFPVC Sbjct: 7 LIAGSHNRNEFVLINADESARIRSVEELSGQTCQICGDEIELSVDGESFVACNECAFPVC 66 Query: 338 RDCYEYERREGTQDCPQCKTRYKRLKGCARV 430 R CYEYERREG Q CPQCKTRYKR+KG RV Sbjct: 67 RPCYEYERREGNQSCPQCKTRYKRIKGSPRV 97
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 117 bits (293), Expect = 1e-26 Identities = 54/91 (59%), Positives = 60/91 (65%) Frame = +2 Query: 158 LVAGSHNRNELVVIRRDGEPGARPPKQQNRGACQICXXXXXXXXXXXXFVACNECAFPVC 337 L+AGSHNRNE V+I D R ++ + CQIC FVACNECAFPVC Sbjct: 7 LIAGSHNRNEFVLINADESARIRSVQELSGQTCQICGDEIELTVSSELFVACNECAFPVC 66 Query: 338 RDCYEYERREGTQDCPQCKTRYKRLKGCARV 430 R CYEYERREG Q CPQCKTRYKR+KG RV Sbjct: 67 RPCYEYERREGNQACPQCKTRYKRIKGSPRV 97
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 116 bits (290), Expect = 3e-26 Identities = 53/91 (58%), Positives = 62/91 (68%) Frame = +2 Query: 158 LVAGSHNRNELVVIRRDGEPGARPPKQQNRGACQICXXXXXXXXXXXXFVACNECAFPVC 337 LVAGS+ RNELV IR + + G +P K N CQIC FVACNECAFPVC Sbjct: 7 LVAGSYRRNELVRIRHESDGGTKPLKNMNGQICQICGDDVGLAETGDVFVACNECAFPVC 66 Query: 338 RDCYEYERREGTQDCPQCKTRYKRLKGCARV 430 R CYEYER++GTQ CPQCKTR++R +G RV Sbjct: 67 RPCYEYERKDGTQCCPQCKTRFRRHRGSPRV 97
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 115 bits (288), Expect = 4e-26 Identities = 54/91 (59%), Positives = 60/91 (65%) Frame = +2 Query: 158 LVAGSHNRNELVVIRRDGEPGARPPKQQNRGACQICXXXXXXXXXXXXFVACNECAFPVC 337 L+AGSHNRNE V+I D R ++ + CQIC FVACNECAFPVC Sbjct: 7 LIAGSHNRNEFVLINADENARIRSVQELSGQTCQICRDEIELTVDGEPFVACNECAFPVC 66 Query: 338 RDCYEYERREGTQDCPQCKTRYKRLKGCARV 430 R CYEYERREG Q CPQCKTR+KRLKG RV Sbjct: 67 RPCYEYERREGNQACPQCKTRFKRLKGSPRV 97
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 110 bits (275), Expect = 1e-24 Identities = 50/91 (54%), Positives = 58/91 (63%) Frame = +2 Query: 158 LVAGSHNRNELVVIRRDGEPGARPPKQQNRGACQICXXXXXXXXXXXXFVACNECAFPVC 337 L+AGSHNRNE V+I D R ++ + C+IC F+ACNECAFP C Sbjct: 7 LIAGSHNRNEFVLINADDTARIRSAEELSGQTCKICRDEIELTDNGEPFIACNECAFPTC 66 Query: 338 RDCYEYERREGTQDCPQCKTRYKRLKGCARV 430 R CYEYERREG Q CPQC TRYKR+KG RV Sbjct: 67 RPCYEYERREGNQACPQCGTRYKRIKGSPRV 97
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 100 bits (248), Expect = 2e-21 Identities = 45/91 (49%), Positives = 56/91 (61%) Frame = +2 Query: 158 LVAGSHNRNELVVIRRDGEPGARPPKQQNRGACQICXXXXXXXXXXXXFVACNECAFPVC 337 +VAGS+ R E V R D + G +P K N CQIC FVACNEC FP+C Sbjct: 1 MVAGSYRRYEFVRNRDDSDDGLKPLKDLNGQICQICGDDVGLTKTGNVFVACNECGFPLC 60 Query: 338 RDCYEYERREGTQDCPQCKTRYKRLKGCARV 430 + CYEYER++G+Q CPQCK R++R G RV Sbjct: 61 QSCYEYERKDGSQCCPQCKARFRRHNGSPRV 91
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 90.1 bits (222), Expect = 2e-18 Identities = 39/71 (54%), Positives = 45/71 (63%) Frame = +2 Query: 206 DGEPGARPPKQQNRGACQICXXXXXXXXXXXXFVACNECAFPVCRDCYEYERREGTQDCP 385 +GE +P K CQIC FVAC+ C+FPVCR CYEYER++G Q CP Sbjct: 4 EGETAGKPMKNIVPQTCQICSDNVGKTVDGDRFVACDICSFPVCRPCYEYERKDGNQSCP 63 Query: 386 QCKTRYKRLKG 418 QCKTRYKRLKG Sbjct: 64 QCKTRYKRLKG 74
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 69.3 bits (168), Expect = 4e-12 Identities = 27/59 (45%), Positives = 35/59 (59%) Frame = +2 Query: 254 CQICXXXXXXXXXXXXFVACNECAFPVCRDCYEYERREGTQDCPQCKTRYKRLKGCARV 430 C++C FVAC+ C +PVC+ CYEYER G + CPQC T YKR KG ++ Sbjct: 23 CKVCGDEVKDDDNGQTFVACHVCVYPVCKPCYEYERSNGNKCCPQCNTLYKRHKGSPKI 81
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 51.2 bits (121), Expect = 1e-06 Identities = 20/50 (40%), Positives = 27/50 (54%) Frame = +2 Query: 254 CQICXXXXXXXXXXXXFVACNECAFPVCRDCYEYERREGTQDCPQCKTRY 403 C C FVAC+EC+FP+C+ C EYE +EG + C +C Y Sbjct: 9 CNTCGEEIGVKSNGEFFVACHECSFPICKACLEYEFKEGRRICLRCGNPY 58
>MYRIP_MOUSE (Q8K3I4) Rab effector MyRIP (Myosin-VIIa- and Rab-interacting| protein) (Exophilin-8) (Slp homolog lacking C2 domains c) Length = 856 Score = 32.0 bits (71), Expect = 0.65 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +2 Query: 311 CNECAFPVCRDCYEYERREGTQDCPQCK 394 C EC F VC+ C Y++ E C C+ Sbjct: 81 CGECKFSVCKSCCSYQKHEKLWVCCVCQ 108
>JHD2C_HUMAN (Q15652) Probable JmjC domain-containing histone demethylation| protein 2C (EC 1.14.11.-) (Jumonji domain-containing protein 1C) (Thyroid receptor-interacting protein 8) (TRIP-8) Length = 2540 Score = 31.6 bits (70), Expect = 0.85 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +2 Query: 311 CNECAFPVCRDCYEYERREGTQD 379 C +C F VC DCY+ + R+ ++D Sbjct: 1860 CQKCGFVVCLDCYKAKERKSSRD 1882
>MYRIP_HUMAN (Q8NFW9) Rab effector MyRIP (Myosin-VIIa- and Rab-interacting| protein) (Exophilin-8) (Slp homolog lacking C2 domains c) Length = 859 Score = 30.8 bits (68), Expect = 1.5 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = +2 Query: 311 CNECAFPVCRDCYEYERREGTQDCPQCK 394 C +C F VC+ C Y++ E C C+ Sbjct: 81 CGDCKFNVCKSCCSYQKHEKAWVCCVCQ 108
>YL053_MIMIV (Q5UPC9) Hypothetical protein L53| Length = 100 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/54 (31%), Positives = 20/54 (37%) Frame = +2 Query: 254 CQICXXXXXXXXXXXXFVACNECAFPVCRDCYEYERREGTQDCPQCKTRYKRLK 415 C+IC F++C E PV CYE T C CK K K Sbjct: 7 CKICCASAKKCCDEPVFISCREKCEPVIYKCYEICEPVCTPVCKPCKPICKPCK 60
>RING1_DROME (Q9VB08) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (dRING1)| (dRING protein) (Sex comb extra protein) Length = 435 Score = 30.0 bits (66), Expect = 2.5 Identities = 17/69 (24%), Positives = 23/69 (33%) Frame = +2 Query: 194 VIRRDGEPGARPPKQQNRGACQICXXXXXXXXXXXXFVACNECAFPVCRDCYEYERREGT 373 VI E P + C IC + EC C DC R G Sbjct: 26 VITDSTEIAVSPRSLHSELMCPICLDMLKKT------MTTKECLHRFCSDCIVTALRSGN 79 Query: 374 QDCPQCKTR 400 ++CP C+ + Sbjct: 80 KECPTCRKK 88
>RNF4_MOUSE (Q9QZS2) RING finger protein 4| Length = 194 Score = 30.0 bits (66), Expect = 2.5 Identities = 14/67 (20%), Positives = 22/67 (32%) Frame = +2 Query: 200 RRDGEPGARPPKQQNRGACQICXXXXXXXXXXXXFVACNECAFPVCRDCYEYERREGTQD 379 R + GA P+ +C IC + EC C C + + Sbjct: 118 RSTKDDGATGPRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLR-DSLKNANT 176 Query: 380 CPQCKTR 400 CP C+ + Sbjct: 177 CPTCRKK 183
>JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone demethylation| protein 2C (EC 1.14.11.-) (Jumonji domain-containing protein 1C) Length = 2350 Score = 30.0 bits (66), Expect = 2.5 Identities = 9/23 (39%), Positives = 15/23 (65%) Frame = +2 Query: 311 CNECAFPVCRDCYEYERREGTQD 379 C +C F C DCY+ + R+ ++D Sbjct: 1671 CRKCGFVACLDCYKAKERKSSRD 1693
>RING1_MACMU (Q8WMN5) Polycomb complex protein RING1 (RING finger protein 1)| Length = 377 Score = 29.6 bits (65), Expect = 3.2 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +2 Query: 317 ECAFPVCRDCYEYERREGTQDCPQCKTR 400 EC C DC R G ++CP C+ + Sbjct: 34 ECLHRFCSDCIVTALRSGNKECPTCRKK 61
>RING1_RAT (Q6MGB6) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 29.6 bits (65), Expect = 3.2 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +2 Query: 317 ECAFPVCRDCYEYERREGTQDCPQCKTR 400 EC C DC R G ++CP C+ + Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKK 90
>RING1_MOUSE (O35730) Polycomb complex protein RING1 (RING finger protein 1)| (Transcription repressor Ring1A) Length = 406 Score = 29.6 bits (65), Expect = 3.2 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +2 Query: 317 ECAFPVCRDCYEYERREGTQDCPQCKTR 400 EC C DC R G ++CP C+ + Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKK 90
>RING1_HUMAN (Q06587) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 29.6 bits (65), Expect = 3.2 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +2 Query: 317 ECAFPVCRDCYEYERREGTQDCPQCKTR 400 EC C DC R G ++CP C+ + Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKK 90
>RING1_CANFA (Q5TJF3) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (RING finger| protein 1) (RING1a) Length = 406 Score = 29.6 bits (65), Expect = 3.2 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +2 Query: 317 ECAFPVCRDCYEYERREGTQDCPQCKTR 400 EC C DC R G ++CP C+ + Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKK 90
>RNG2B_XENLA (Q7ZWM8) Ubiquitin ligase protein RING2-B (EC 6.3.2.-) (RING finger| protein 2-B) (RING finger protein 1B-B) (RING1b-B) Length = 343 Score = 29.6 bits (65), Expect = 3.2 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +2 Query: 317 ECAFPVCRDCYEYERREGTQDCPQCKTR 400 EC C DC R G ++CP C+ + Sbjct: 62 ECLHRFCSDCIVTALRSGNKECPTCRKK 89
>RNG2A_XENLA (Q66J69) Ubiquitin ligase protein RING2-A (EC 6.3.2.-) (RING finger| protein 2-A) (RING finger protein 1B-A) (RING1b-A) Length = 344 Score = 29.6 bits (65), Expect = 3.2 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +2 Query: 317 ECAFPVCRDCYEYERREGTQDCPQCKTR 400 EC C DC R G ++CP C+ + Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTCRKK 90
>RING2_PONPY (Q5R9J5) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 29.3 bits (64), Expect = 4.2 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +2 Query: 317 ECAFPVCRDCYEYERREGTQDCPQCKTR 400 EC C DC R G ++CP C+ + Sbjct: 66 ECLHRFCADCIITALRSGNKECPTCRKK 93
>RING2_MOUSE (Q9CQJ4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 29.3 bits (64), Expect = 4.2 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +2 Query: 317 ECAFPVCRDCYEYERREGTQDCPQCKTR 400 EC C DC R G ++CP C+ + Sbjct: 66 ECLHRFCADCIITALRSGNKECPTCRKK 93
>RING2_HUMAN (Q99496) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) (RING finger protein BAP-1) (DinG protein) (Huntingtin-interacting protein 2-interacting protein 3) (HIP2-interacting protein 3) Length = 336 Score = 29.3 bits (64), Expect = 4.2 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +2 Query: 317 ECAFPVCRDCYEYERREGTQDCPQCKTR 400 EC C DC R G ++CP C+ + Sbjct: 66 ECLHRFCADCIITALRSGNKECPTCRKK 93
>RING2_BRARE (Q803I4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 29.3 bits (64), Expect = 4.2 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +2 Query: 317 ECAFPVCRDCYEYERREGTQDCPQCKTR 400 EC C DC R G ++CP C+ + Sbjct: 66 ECLHRFCADCIITALRSGNKECPTCRKK 93
>MAT1_MARGL (P51950) CDK-activating kinase assembly factor MAT1 (RING finger| protein MAT1) (Menage a trois) (CDK7/cyclin H assembly factor) Length = 324 Score = 29.3 bits (64), Expect = 4.2 Identities = 11/32 (34%), Positives = 15/32 (46%) Frame = +2 Query: 314 NECAFPVCRDCYEYERREGTQDCPQCKTRYKR 409 N C +C +C E G+ CP C T +R Sbjct: 25 NVCGHTLCENCVEILFVRGSGSCPSCNTPLRR 56
>RING2_RAT (Q4KLY4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 308 Score = 29.3 bits (64), Expect = 4.2 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +2 Query: 317 ECAFPVCRDCYEYERREGTQDCPQCKTR 400 EC C DC R G ++CP C+ + Sbjct: 66 ECLHRFCADCIITALRSGNKECPTCRKK 93
>YAC4_SCHPO (Q09818) Putative general negative regulator of transcription| C16C9.04c Length = 489 Score = 28.9 bits (63), Expect = 5.5 Identities = 9/29 (31%), Positives = 16/29 (55%) Frame = +2 Query: 317 ECAFPVCRDCYEYERREGTQDCPQCKTRY 403 +C + VCR C+ + + + CP C+ Y Sbjct: 36 QCGYRVCRFCWHHIKEDLNGRCPACRRLY 64
>CAH3_HUMAN (P07451) Carbonic anhydrase 3 (EC 4.2.1.1) (Carbonic anhydrase III)| (Carbonate dehydratase III) (CA-III) Length = 259 Score = 28.9 bits (63), Expect = 5.5 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = +2 Query: 320 CAFPVCRDCYEYERREGTQDCPQC 391 C FP CRD + Y+ T C +C Sbjct: 181 CLFPACRDYWTYQGSFTTPPCEEC 204
>TRI45_MOUSE (Q6PFY8) Tripartite motif protein 45| Length = 580 Score = 28.1 bits (61), Expect = 9.4 Identities = 12/23 (52%), Positives = 12/23 (52%) Frame = +2 Query: 311 CNECAFPVCRDCYEYERREGTQD 379 C C PVCRDC E RE D Sbjct: 203 CELCDRPVCRDCVVGEHREHPYD 225
>TNR14_HUMAN (Q92956) Tumor necrosis factor receptor superfamily member 14| precursor (Herpesvirus entry mediator A) (Tumor necrosis factor receptor-like 2) (TR2) Length = 283 Score = 28.1 bits (61), Expect = 9.4 Identities = 11/37 (29%), Positives = 17/37 (45%) Frame = +2 Query: 320 CAFPVCRDCYEYERREGTQDCPQCKTRYKRLKGCARV 430 C P C E E G++ CP+C Y+ + C + Sbjct: 34 CYAPALPSCKEDEYPVGSECCPKCSPGYRVKEACGEL 70
>RNF4_HUMAN (P78317) RING finger protein 4| Length = 190 Score = 28.1 bits (61), Expect = 9.4 Identities = 15/67 (22%), Positives = 22/67 (32%) Frame = +2 Query: 200 RRDGEPGARPPKQQNRGACQICXXXXXXXXXXXXFVACNECAFPVCRDCYEYERREGTQD 379 R +G G RP +C IC + EC C C + + Sbjct: 117 RDEGATGLRP---SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLR-DSLKNANT 172 Query: 380 CPQCKTR 400 CP C+ + Sbjct: 173 CPTCRKK 179
>SYTL4_HUMAN (Q96C24) Synaptotagmin-like protein 4 (Exophilin-2) (Granuphilin)| Length = 671 Score = 28.1 bits (61), Expect = 9.4 Identities = 20/71 (28%), Positives = 26/71 (36%) Frame = +2 Query: 179 RNELVVIRRDGEPGARPPKQQNRGACQICXXXXXXXXXXXXFVACNECAFPVCRDCYEYE 358 +NEL+ I+R G R + + C C C C VCRDC + Sbjct: 40 KNELLEIKRKG--AKRGSQHYSDRTCARCQESLGRLSPKTN--TCRGCNHLVCRDC-RIQ 94 Query: 359 RREGTQDCPQC 391 GT C C Sbjct: 95 ESNGTWRCKVC 105
>CAH3_RAT (P14141) Carbonic anhydrase 3 (EC 4.2.1.1) (Carbonic anhydrase III)| (Carbonate dehydratase III) (CA-III) Length = 259 Score = 28.1 bits (61), Expect = 9.4 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = +2 Query: 320 CAFPVCRDCYEYERREGTQDCPQC 391 C FP CRD + Y T C +C Sbjct: 181 CLFPACRDYWTYHGSFTTPPCEEC 204
>CAH3_PIG (Q5S1S4) Carbonic anhydrase 3 (EC 4.2.1.1) (Carbonic anhydrase III)| (Carbonate dehydratase III) (CA-III) Length = 259 Score = 28.1 bits (61), Expect = 9.4 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = +2 Query: 320 CAFPVCRDCYEYERREGTQDCPQC 391 C FP CRD + Y T C +C Sbjct: 181 CLFPACRDYWTYHGSFTTPPCEEC 204
>CAH3_MOUSE (P16015) Carbonic anhydrase 3 (EC 4.2.1.1) (Carbonic anhydrase III)| (Carbonate dehydratase III) (CA-III) Length = 259 Score = 28.1 bits (61), Expect = 9.4 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = +2 Query: 320 CAFPVCRDCYEYERREGTQDCPQC 391 C FP CRD + Y T C +C Sbjct: 181 CLFPACRDYWTYHGSFTTPPCEEC 204
>CAH3_HORSE (P07450) Carbonic anhydrase 3 (EC 4.2.1.1) (Carbonic anhydrase III)| (Carbonate dehydratase III) (CA-III) Length = 259 Score = 28.1 bits (61), Expect = 9.4 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = +2 Query: 320 CAFPVCRDCYEYERREGTQDCPQC 391 C FP CRD + Y T C +C Sbjct: 181 CLFPTCRDYWTYRGSFTTPPCEEC 204
>RPOB_THEAC (Q03587) DNA-directed RNA polymerase subunit B (EC 2.7.7.6)| Length = 1195 Score = 28.1 bits (61), Expect = 9.4 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = +2 Query: 320 CAFPVCRDCYEYERREGTQDCPQC 391 C P C Y+RR+GT CP C Sbjct: 1135 CGNPSCGHIAIYDRRKGTLRCPVC 1158 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.134 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,079,828 Number of Sequences: 219361 Number of extensions: 352053 Number of successful extensions: 1442 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 1400 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1440 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
