ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl56c12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY483152.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA2) mRNA, complete cds Length = 3907 Score = 656 bits (331), Expect = 0.0 Identities = 343/347 (98%) Strand = Plus / Plus Query: 86 tcctccgagagagtctgggcgggatctggggcgcggggatctggtgggcgcgccatggag 145 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 21 tccttcgagagagtctgagcgggatctggggcgcggggatctggtgggcgcgccatggag 80 Query: 146 gccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgccgc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81 gccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgccgc 140 Query: 206 gacggggagccaggggcgaggccgccgaagcagcagaaccgcggggcgtgccagatttgc 265 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 141 gacggggagccaggggcgaggccgctgaagcagcagaaccgcggggcgtgccagatttgc 200 Query: 266 ggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgagtgcgcc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 ggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgagtgcgcc 260 Query: 326 ttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggactgccca 385 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 261 ttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccagaactgccca 320 Query: 386 cagtgcaagaccagatacaagcgcctcaaggggtgcgcgcgcgtgcc 432 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 cagtgcaagaccagatacaagcgcctcaaggggtgcgcgcgcgtgcc 367
>gb|AY104730.1| Zea mays PCO100501 mRNA sequence Length = 3783 Score = 295 bits (149), Expect = 6e-77 Identities = 257/293 (87%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 186 atggaggccagcgccgggctggtcgccggctcgcacaaccggaacgagctcgtcgtcatc 245 Query: 200 cgccgcgacggggagccaggggcgaggccgccgaagcagcagaaccgcggggcgtgccag 259 |||||||| || ||||||||| ||| ||| | | |||| |||| || || ||||||| Sbjct: 246 cgccgcgatggcgagccagggccgaagcccatggaccagcggaacggccaggtgtgccag 305 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| |||||| | ||||| ||| || || ||||| |||||||||||| Sbjct: 306 atttgcggcgacgacgtggggcgcaaccccgacggggagccgttcgtggcctgcaacgag 365 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggac 379 |||||||||||| ||||||| |||||||||||||||||||| ||||||||||| ||| || Sbjct: 366 tgcgccttccccatctgccgggactgctacgagtacgagcgccgcgagggcacgcagaac 425 Query: 380 tgcccacagtgcaagaccagatacaagcgcctcaaggggtgcgcgcgcgtgcc 432 ||||| |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 426 tgcccccagtgcaagacccgcttcaagcgcctcaaggggtgcgcgcgcgtgcc 478
>ref|XM_470347.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3905 Score = 289 bits (146), Expect = 4e-75 Identities = 254/290 (87%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 1 atggaggccagcgccgggctggtcgccggctcccacaaccggaacgagctcgtcgtcatc 60 Query: 200 cgccgcgacggggagccaggggcgaggccgccgaagcagcagaaccgcggggcgtgccag 259 ||||||||||||||||| ||| ||| |||| |||||| ||| | || ||||||| Sbjct: 61 cgccgcgacggggagcccgggccgaagccggtgaagcatacgaatgggcaggtgtgccag 120 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| | || ||| ||||| |||||| ||||||||||||||||||||| Sbjct: 121 atttgcggcgacgacgtcggcctcacccccgacggcgagcccttcgtcgcctgcaacgag 180 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggac 379 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || Sbjct: 181 tgcgccttccccgtctgccgcgactgctacgagtacgagcgccgcgagggcacgcagaac 240 Query: 380 tgcccacagtgcaagaccagatacaagcgcctcaaggggtgcgcgcgcgt 429 ||||| |||||||||||| | | ||| ||||||||||| ||||| ||||| Sbjct: 241 tgcccccagtgcaagacccgcttcaaacgcctcaagggttgcgcccgcgt 290
>dbj|AK100877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C10, full insert sequence Length = 4029 Score = 289 bits (146), Expect = 4e-75 Identities = 254/290 (87%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 171 atggaggccagcgccgggctggtcgccggctcccacaaccggaacgagctcgtcgtcatc 230 Query: 200 cgccgcgacggggagccaggggcgaggccgccgaagcagcagaaccgcggggcgtgccag 259 ||||||||||||||||| ||| ||| |||| |||||| ||| | || ||||||| Sbjct: 231 cgccgcgacggggagcccgggccgaagccggtgaagcatacgaatgggcaggtgtgccag 290 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| | || ||| ||||| |||||| ||||||||||||||||||||| Sbjct: 291 atttgcggcgacgacgtcggcctcacccccgacggcgagcccttcgtcgcctgcaacgag 350 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggac 379 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || Sbjct: 351 tgcgccttccccgtctgccgcgactgctacgagtacgagcgccgcgagggcacgcagaac 410 Query: 380 tgcccacagtgcaagaccagatacaagcgcctcaaggggtgcgcgcgcgt 429 ||||| |||||||||||| | | ||| ||||||||||| ||||| ||||| Sbjct: 411 tgcccccagtgcaagacccgcttcaaacgcctcaagggttgcgcccgcgt 460
>gb|AF200531.1|AF200531 Zea mays cellulose synthase-7 (CesA-7) mRNA, complete cds Length = 3968 Score = 281 bits (142), Expect = 9e-73 Identities = 244/278 (87%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 143 atggaggcgagcgccgggctggtggccggctcccacaaccgcaacgagctcgtcgtcatc 202 Query: 200 cgccgcgacggggagccaggggcgaggccgccgaagcagcagaaccgcggggcgtgccag 259 ||||||||||| || || ||| ||| ||||||| | |||||||| | || ||||||| Sbjct: 203 cgccgcgacggcgatcccgggccgaagccgccgcgggagcagaacgggcaggtgtgccag 262 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| | || || | ||||||||| ||||||||||| || ||||||||| Sbjct: 263 atttgcggcgacgacgtcggccttgcccccggcggggaccccttcgtggcgtgcaacgag 322 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggac 379 |||||||||||||||||||| ||||||||||| |||||||| || |||||||| ||| || Sbjct: 323 tgcgccttccccgtctgccgggactgctacgaatacgagcgccgggagggcacgcagaac 382 Query: 380 tgcccacagtgcaagaccagatacaagcgcctcaaggg 417 ||||| ||||||||||| ||||||||||||||||||| Sbjct: 383 tgcccccagtgcaagactcgatacaagcgcctcaaggg 420
>gb|AY103655.1| Zea mays PCO096398 mRNA sequence Length = 3897 Score = 281 bits (142), Expect = 9e-73 Identities = 244/278 (87%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 156 atggaggcgagcgccgggctggtggccggctcccacaaccgcaacgagctcgtcgtcatc 215 Query: 200 cgccgcgacggggagccaggggcgaggccgccgaagcagcagaaccgcggggcgtgccag 259 ||||||||||| || || ||| ||| ||||||| | |||||||| | || ||||||| Sbjct: 216 cgccgcgacggcgatcccgggccgaagccgccgcgggagcagaacgggcaggtgtgccag 275 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| | || || | ||||||||| ||||||||||| || ||||||||| Sbjct: 276 atttgcggcgacgacgtcggccttgcccccggcggggaccccttcgtggcgtgcaacgag 335 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggac 379 |||||||||||||||||||| ||||||||||| |||||||| || |||||||| ||| || Sbjct: 336 tgcgccttccccgtctgccgggactgctacgaatacgagcgccgggagggcacgcagaac 395 Query: 380 tgcccacagtgcaagaccagatacaagcgcctcaaggg 417 ||||| ||||||||||| ||||||||||||||||||| Sbjct: 396 tgcccccagtgcaagactcgatacaagcgcctcaaggg 433
>dbj|AK121193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086F23, full insert sequence Length = 4127 Score = 256 bits (129), Expect = 5e-65 Identities = 252/293 (86%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| ||||| || ||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 256 atggaggcgagcgccggtctggtcgccggctcccacaaccgcaacgagctcgtcgtcatc 315 Query: 200 cgccgcgacggggagccaggggcgaggccgccgaagcagcagaaccgcggggcgtgccag 259 ||||||||||| || || ||| ||| ||||| |||||||||| | || ||||||| Sbjct: 316 cgccgcgacggcgatcccgggccgaagccgctccggcagcagaacgggcaggtgtgccag 375 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| |||||||| ||||| |||||| || ||||| || ||||||||| Sbjct: 376 atttgcggcgacgacgtggggctcaaccccgacggcgagccgttcgtggcgtgcaacgag 435 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggac 379 ||||||||||| || |||||||||||||||||||||||||| ||||||||||| ||| || Sbjct: 436 tgcgccttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcacgcagaac 495 Query: 380 tgcccacagtgcaagaccagatacaagcgcctcaaggggtgcgcgcgcgtgcc 432 ||||| |||||||||||| | | ||||||||||| ||| ||||| || ||||| Sbjct: 496 tgcccccagtgcaagacccgcttcaagcgcctcaggggttgcgctcgtgtgcc 548
>dbj|AK120236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043M21, full insert sequence Length = 2931 Score = 256 bits (129), Expect = 5e-65 Identities = 252/293 (86%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| ||||| || ||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 258 atggaggcgagcgccggtctggtcgccggctcccacaaccgcaacgagctcgtcgtcatc 317 Query: 200 cgccgcgacggggagccaggggcgaggccgccgaagcagcagaaccgcggggcgtgccag 259 ||||||||||| || || ||| ||| ||||| |||||||||| | || ||||||| Sbjct: 318 cgccgcgacggcgatcccgggccgaagccgctccggcagcagaacgggcaggtgtgccag 377 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| |||||||| ||||| |||||| || ||||| || ||||||||| Sbjct: 378 atttgcggcgacgacgtggggctcaaccccgacggcgagccgttcgtggcgtgcaacgag 437 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggac 379 ||||||||||| || |||||||||||||||||||||||||| ||||||||||| ||| || Sbjct: 438 tgcgccttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcacgcagaac 497 Query: 380 tgcccacagtgcaagaccagatacaagcgcctcaaggggtgcgcgcgcgtgcc 432 ||||| |||||||||||| | | ||||||||||| ||| ||||| || ||||| Sbjct: 498 tgcccccagtgcaagacccgcttcaagcgcctcaggggttgcgctcgtgtgcc 550
>dbj|AK073561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042D15, full insert sequence Length = 4208 Score = 256 bits (129), Expect = 5e-65 Identities = 252/293 (86%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| ||||| || ||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 337 atggaggcgagcgccggtctggtcgccggctcccacaaccgcaacgagctcgtcgtcatc 396 Query: 200 cgccgcgacggggagccaggggcgaggccgccgaagcagcagaaccgcggggcgtgccag 259 ||||||||||| || || ||| ||| ||||| |||||||||| | || ||||||| Sbjct: 397 cgccgcgacggcgatcccgggccgaagccgctccggcagcagaacgggcaggtgtgccag 456 Query: 260 atttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctgcaacgag 319 |||||||| |||||| |||||||| ||||| |||||| || ||||| || ||||||||| Sbjct: 457 atttgcggcgacgacgtggggctcaaccccgacggcgagccgttcgtggcgtgcaacgag 516 Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggac 379 ||||||||||| || |||||||||||||||||||||||||| ||||||||||| ||| || Sbjct: 517 tgcgccttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcacgcagaac 576 Query: 380 tgcccacagtgcaagaccagatacaagcgcctcaaggggtgcgcgcgcgtgcc 432 ||||| |||||||||||| | | ||||||||||| ||| ||||| || ||||| Sbjct: 577 tgcccccagtgcaagacccgcttcaagcgcctcaggggttgcgctcgtgtgcc 629
>gb|AF200530.1|AF200530 Zea mays cellulose synthase-6 (CesA-6) mRNA, complete cds Length = 3538 Score = 216 bits (109), Expect = 4e-53 Identities = 211/245 (86%) Strand = Plus / Plus Query: 188 ctcgtcgtcatccgccgcgacggggagccaggggcgaggccgccgaagcagcagaaccgc 247 |||||||||||||||||||| || ||||||||| ||| ||| | | |||| |||| || Sbjct: 1 ctcgtcgtcatccgccgcgatggcgagccagggccgaagcccatggaccagcggaacggc 60 Query: 248 ggggcgtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtc 307 || ||||||||||||||| |||||| |||||| | ||||| ||| || || ||||| Sbjct: 61 caggtgtgccagatttgcggcgacgacgtggggcgcaaccccgacggggagcctttcgtg 120 Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| Sbjct: 121 gcctgcaacgagtgcgccttccccatctgccgggactgctacgagtacgagcgccgcgag 180 Query: 368 ggcacccaggactgcccacagtgcaagaccagatacaagcgcctcaaggggtgcgcgcgc 427 ||||| ||| ||||||| |||||||||||| | | ||||||| ||||||||||||||||| Sbjct: 181 ggcacgcagaactgcccccagtgcaagacccgcttcaagcgcttcaaggggtgcgcgcgc 240 Query: 428 gtgcc 432 ||||| Sbjct: 241 gtgcc 245
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 200 bits (101), Expect = 3e-48 Identities = 149/165 (90%) Strand = Plus / Plus Query: 253 gtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctg 312 ||||||||||||||| |||||| | || ||| ||||| |||||| |||||||||||||| Sbjct: 34874246 gtgccagatttgcggcgacgacgtcggcctcacccccgacggcgagcccttcgtcgcctg 34874305 Query: 313 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcac 372 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 34874306 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgccgcgagggcac 34874365 Query: 373 ccaggactgcccacagtgcaagaccagatacaagcgcctcaaggg 417 ||| ||||||| |||||||||||| | | ||| ||||||||||| Sbjct: 34874366 gcagaactgcccccagtgcaagacccgcttcaaacgcctcaaggg 34874410 Score = 123 bits (62), Expect = 5e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 34874037 atggaggccagcgccgggctggtcgccggctcccacaaccggaacgagctcgtcgtcatc 34874096 Query: 200 cgccgcgacggggagccagggg 221 ||||||||||||||||| |||| Sbjct: 34874097 cgccgcgacggggagcccgggg 34874118 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 344 tgctacgagtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagatac 403 ||||||||||||||||| || |||| ||||| ||||| ||||||||||||| ||| Sbjct: 33481804 tgctacgagtacgagcgcaaggacggcagccaggcgtgcccgcagtgcaagaccaagtac 33481745 Query: 404 aagcgcctcaaggg 417 ||||||| |||||| Sbjct: 33481744 aagcgccacaaggg 33481731
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 200 bits (101), Expect = 3e-48 Identities = 149/165 (90%) Strand = Plus / Plus Query: 253 gtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctg 312 ||||||||||||||| |||||| | || ||| ||||| |||||| |||||||||||||| Sbjct: 34964318 gtgccagatttgcggcgacgacgtcggcctcacccccgacggcgagcccttcgtcgcctg 34964377 Query: 313 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcac 372 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 34964378 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgccgcgagggcac 34964437 Query: 373 ccaggactgcccacagtgcaagaccagatacaagcgcctcaaggg 417 ||| ||||||| |||||||||||| | | ||| ||||||||||| Sbjct: 34964438 gcagaactgcccccagtgcaagacccgcttcaaacgcctcaaggg 34964482 Score = 123 bits (62), Expect = 5e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 34964109 atggaggccagcgccgggctggtcgccggctcccacaaccggaacgagctcgtcgtcatc 34964168 Query: 200 cgccgcgacggggagccagggg 221 ||||||||||||||||| |||| Sbjct: 34964169 cgccgcgacggggagcccgggg 34964190 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 344 tgctacgagtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagatac 403 ||||||||||||||||| || |||| ||||| ||||| ||||||||||||| ||| Sbjct: 33572314 tgctacgagtacgagcgcaaggacggcagccaggcgtgcccgcagtgcaagaccaagtac 33572255 Query: 404 aagcgcctcaaggg 417 ||||||| |||||| Sbjct: 33572254 aagcgccacaaggg 33572241
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 200 bits (101), Expect = 3e-48 Identities = 149/165 (90%) Strand = Plus / Minus Query: 253 gtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctg 312 ||||||||||||||| |||||| | || ||| ||||| |||||| |||||||||||||| Sbjct: 141234 gtgccagatttgcggcgacgacgtcggcctcacccccgacggcgagcccttcgtcgcctg 141175 Query: 313 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcac 372 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 141174 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgccgcgagggcac 141115 Query: 373 ccaggactgcccacagtgcaagaccagatacaagcgcctcaaggg 417 ||| ||||||| |||||||||||| | | ||| ||||||||||| Sbjct: 141114 gcagaactgcccccagtgcaagacccgcttcaaacgcctcaaggg 141070 Score = 123 bits (62), Expect = 5e-25 Identities = 77/82 (93%) Strand = Plus / Minus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 141443 atggaggccagcgccgggctggtcgccggctcccacaaccggaacgagctcgtcgtcatc 141384 Query: 200 cgccgcgacggggagccagggg 221 ||||||||||||||||| |||| Sbjct: 141383 cgccgcgacggggagcccgggg 141362
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 176 bits (89), Expect = 4e-41 Identities = 143/161 (88%) Strand = Plus / Minus Query: 253 gtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctg 312 ||||||||||||||| |||||| |||||||| ||||| |||||| || ||||| || || Sbjct: 13693081 gtgccagatttgcggcgacgacgtggggctcaaccccgacggcgagccgttcgtggcgtg 13693022 Query: 313 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcac 372 |||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct: 13693021 caacgagtgcgccttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcac 13692962 Query: 373 ccaggactgcccacagtgcaagaccagatacaagcgcctca 413 ||| ||||||| |||||||||||| | | ||||||||||| Sbjct: 13692961 gcagaactgcccccagtgcaagacccgcttcaagcgcctca 13692921 Score = 135 bits (68), Expect = 1e-28 Identities = 143/168 (85%) Strand = Plus / Plus Query: 250 ggcgtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgc 309 |||||||||||| ||||| |||||| | ||| || |||| ||| || || ||||| || Sbjct: 8528627 ggcgtgccagatatgcggcgacgacgtcggggaagggcccgacggggagccgttcgtggc 8528686 Query: 310 ctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgaggg 369 |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 8528687 gtgcaacgagtgcgccttccccgtctgccgcaactgctacgactacgagcgccgcgaggg 8528746 Query: 370 cacccaggactgcccacagtgcaagaccagatacaagcgcctcaaggg 417 | | |||| ||||| |||||||||||| | | ||||||||||||||| Sbjct: 8528747 ctcgcaggcttgcccccagtgcaagacccgcttcaagcgcctcaaggg 8528794 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| ||||| || ||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 13693291 atggaggcgagcgccggtctggtcgccggctcccacaaccgcaacgagctcgtcgtcatc 13693232 Query: 200 cgccgcgacgg 210 ||||||||||| Sbjct: 13693231 cgccgcgacgg 13693221 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 302 ttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcga 361 |||| ||||||| ||| |||| |||||| || |||||| |||||||||||||||||| Sbjct: 5890104 ttcgccgcctgcgacgtctgcggcttcccggtgtgccgcccctgctacgagtacgagcgc 5890045 Query: 362 cgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcctcaaggg 417 || |||||||||| ||||| ||||||||||||| |||||||||| |||||| Sbjct: 5890044 aaggatggcacccaggcttgcccccagtgcaagaccaagtacaagcgccacaaggg 5889989 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 |||||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 8528508 atggaggcgagcgcggggctggtggcggggtcgcacaaccggaacgagct 8528557
>dbj|AP004298.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409D09 Length = 150485 Score = 176 bits (89), Expect = 4e-41 Identities = 143/161 (88%) Strand = Plus / Minus Query: 253 gtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgcctg 312 ||||||||||||||| |||||| |||||||| ||||| |||||| || ||||| || || Sbjct: 44073 gtgccagatttgcggcgacgacgtggggctcaaccccgacggcgagccgttcgtggcgtg 44014 Query: 313 caacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcac 372 |||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| Sbjct: 44013 caacgagtgcgccttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcac 43954 Query: 373 ccaggactgcccacagtgcaagaccagatacaagcgcctca 413 ||| ||||||| |||||||||||| | | ||||||||||| Sbjct: 43953 gcagaactgcccccagtgcaagacccgcttcaagcgcctca 43913 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| ||||| || ||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 44283 atggaggcgagcgccggtctggtcgccggctcccacaaccgcaacgagctcgtcgtcatc 44224 Query: 200 cgccgcgacgg 210 ||||||||||| Sbjct: 44223 cgccgcgacgg 44213
>dbj|AK121170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081B08, full insert sequence Length = 3631 Score = 165 bits (83), Expect = 1e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||||| ||||||||||||||||||||||| |||||| || |||||| ||||||||| Sbjct: 242 cggcgacctcttcgtcgcctgcaacgagtgcggcttcccggtgtgccgcccctgctacga 301 Query: 352 gtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcct 411 ||||||||| ||||||||||||||| ||||||| |||||||||||| | ||||||||||| Sbjct: 302 gtacgagcgccgcgagggcacccagaactgcccccagtgcaagacccgctacaagcgcct 361 Query: 412 caagggg 418 ||||||| Sbjct: 362 caagggg 368 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 137 gccatggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 ||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 93 gccatggaggcgagcgccgggctggtggccgggtcgcacaaccggaacgagct 145
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 163 bits (82), Expect = 6e-37 Identities = 115/126 (91%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||||| ||||||||||||||||||||||| |||||| || |||||| ||||||||| Sbjct: 15226908 cggcgacctcttcgtcgcctgcaacgagtgcggcttcccggtgtgccgcccctgctacga 15226967 Query: 352 gtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcct 411 ||||||||| ||||||||||||||| ||||||| |||||||||||| | ||||||||||| Sbjct: 15226968 gtacgagcgccgcgagggcacccagaactgcccccagtgcaagacccgctacaagcgcct 15227027 Query: 412 caaggg 417 |||||| Sbjct: 15227028 caaggg 15227033 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 137 gccatggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 ||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 15226759 gccatggaggcgagcgccgggctggtggccgggtcgcacaaccggaacgagct 15226811
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 163 bits (82), Expect = 6e-37 Identities = 115/126 (91%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||||| ||||||||||||||||||||||| |||||| || |||||| ||||||||| Sbjct: 120884 cggcgacctcttcgtcgcctgcaacgagtgcggcttcccggtgtgccgcccctgctacga 120943 Query: 352 gtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcct 411 ||||||||| ||||||||||||||| ||||||| |||||||||||| | ||||||||||| Sbjct: 120944 gtacgagcgccgcgagggcacccagaactgcccccagtgcaagacccgctacaagcgcct 121003 Query: 412 caaggg 417 |||||| Sbjct: 121004 caaggg 121009 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 137 gccatggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 ||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 120735 gccatggaggcgagcgccgggctggtggccgggtcgcacaaccggaacgagct 120787
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 163 bits (82), Expect = 6e-37 Identities = 115/126 (91%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||||| ||||||||||||||||||||||| |||||| || |||||| ||||||||| Sbjct: 6097 cggcgacctcttcgtcgcctgcaacgagtgcggcttcccggtgtgccgcccctgctacga 6156 Query: 352 gtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcct 411 ||||||||| ||||||||||||||| ||||||| |||||||||||| | ||||||||||| Sbjct: 6157 gtacgagcgccgcgagggcacccagaactgcccccagtgcaagacccgctacaagcgcct 6216 Query: 412 caaggg 417 |||||| Sbjct: 6217 caaggg 6222 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 137 gccatggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 ||||||||||| ||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 5948 gccatggaggcgagcgccgggctggtggccgggtcgcacaaccggaacgagct 6000
>ref|XM_477282.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3746 Score = 145 bits (73), Expect = 1e-31 Identities = 151/177 (85%) Strand = Plus / Plus Query: 250 ggcgtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgc 309 |||||||||||| ||||| |||||| | ||| || |||| ||| || || ||||| || Sbjct: 185 ggcgtgccagatatgcggcgacgacgtcggggaagggcccgacggggagccgttcgtggc 244 Query: 310 ctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgaggg 369 |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 245 gtgcaacgagtgcgccttccccgtctgccgcaactgctacgactacgagcgccgcgaggg 304 Query: 370 cacccaggactgcccacagtgcaagaccagatacaagcgcctcaaggggtgcgcgcg 426 | | |||| ||||| |||||||||||| | | ||||||||||||||||||| |||| Sbjct: 305 ctcgcaggcttgcccccagtgcaagacccgcttcaagcgcctcaaggggtgcccgcg 361 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 |||||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 66 atggaggcgagcgcggggctggtggcggggtcgcacaaccggaacgagct 115
>dbj|AK099735.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090G16, full insert sequence Length = 2064 Score = 145 bits (73), Expect = 1e-31 Identities = 151/177 (85%) Strand = Plus / Plus Query: 250 ggcgtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgc 309 |||||||||||| ||||| |||||| | ||| || |||| ||| || || ||||| || Sbjct: 185 ggcgtgccagatatgcggcgacgacgtcggggaagggcccgacggggagccgttcgtggc 244 Query: 310 ctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgaggg 369 |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 245 gtgcaacgagtgcgccttccccgtctgccgcaactgctacgactacgagcgccgcgaggg 304 Query: 370 cacccaggactgcccacagtgcaagaccagatacaagcgcctcaaggggtgcgcgcg 426 | | |||| ||||| |||||||||||| | | ||||||||||||||||||| |||| Sbjct: 305 ctcgcaggcttgcccccagtgcaagacccgcttcaagcgcctcaaggggtgcccgcg 361 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 |||||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 66 atggaggcgagcgcggggctggtggcggggtcgcacaaccggaacgagct 115
>dbj|AK100914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133D04, full insert sequence Length = 3746 Score = 145 bits (73), Expect = 1e-31 Identities = 151/177 (85%) Strand = Plus / Plus Query: 250 ggcgtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgc 309 |||||||||||| ||||| |||||| | ||| || |||| ||| || || ||||| || Sbjct: 185 ggcgtgccagatatgcggcgacgacgtcggggaagggcccgacggggagccgttcgtggc 244 Query: 310 ctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgaggg 369 |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 245 gtgcaacgagtgcgccttccccgtctgccgcaactgctacgactacgagcgccgcgaggg 304 Query: 370 cacccaggactgcccacagtgcaagaccagatacaagcgcctcaaggggtgcgcgcg 426 | | |||| ||||| |||||||||||| | | ||||||||||||||||||| |||| Sbjct: 305 ctcgcaggcttgcccccagtgcaagacccgcttcaagcgcctcaaggggtgcccgcg 361 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 |||||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 66 atggaggcgagcgcggggctggtggcggggtcgcacaaccggaacgagct 115
>gb|AY103701.1| Zea mays PCO120363 mRNA sequence Length = 3788 Score = 143 bits (72), Expect = 5e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 299 cccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgag 358 |||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 366 cccttcgtggcgtgcaacgagtgcgccttccccgtctgccgcgcctgctacgagtacgag 425 Query: 359 cgacgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcctcaagggg 418 || ||||||||| | |||| ||||| ||||||| |||| | ||||||||||||||||| Sbjct: 426 cgccgcgagggctcgcaggcgtgcccgcagtgcaggacccgctacaagcgcctcaagggt 485 Query: 419 tgcgcgcg 426 ||| |||| Sbjct: 486 tgcccgcg 493 Score = 89.7 bits (45), Expect = 7e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| |||||||||||||||||||||||||| ||||| |||||||| || || ||| Sbjct: 201 atggaggctagcgcggggctggtggccggctcgcataaccggaacgagctggtggtgatc 260 Query: 200 cgccgcgac 208 ||||||||| Sbjct: 261 cgccgcgac 269
>gb|AY372246.1| Zea mays cellulose synthase catalytic subunit 12 (CesA12) mRNA, complete cds Length = 3443 Score = 141 bits (71), Expect = 2e-30 Identities = 113/127 (88%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||||| ||||||||||||||||||||||| ||||||||| ||||| ||||||||| Sbjct: 238 cggcgacctcttcgtcgcctgcaacgagtgcggcttccccgtgtgccggccctgctacga 297 Query: 352 gtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcct 411 ||||||||| || |||||||| ||| ||||||| ||||||||||| | ||||||||||| Sbjct: 298 gtacgagcgccgggagggcacgcagaactgcccccagtgcaagacgcgctacaagcgcct 357 Query: 412 caagggg 418 ||||||| Sbjct: 358 caagggg 364 Score = 89.7 bits (45), Expect = 7e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 133 gcgcgccatggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 |||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 85 gcgcgcgatggaggccagcgccgggctggtggccggctcgcacaaccggaacgagct 141
>gb|AF200532.1|AF200532 Zea mays cellulose synthase-8 (CesA-8) mRNA, complete cds Length = 3812 Score = 135 bits (68), Expect = 1e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 299 cccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgag 358 |||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 379 cccttcgtggcgtgcaacgagtgcgccttccccgtctgccgcgcctgctacgagtacgag 438 Query: 359 cgacgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcctcaagggg 418 || ||||||||| | || | ||||| ||||||| |||| | ||||||||||||||||| Sbjct: 439 cgccgcgagggctcgcaagcgtgcccgcagtgcaggacccgctacaagcgcctcaagggc 498 Query: 419 tgcgcgcg 426 ||| |||| Sbjct: 499 tgcccgcg 506 Score = 89.7 bits (45), Expect = 7e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatc 199 |||||||| |||||||||||||||||||||||||| ||||| |||||||| || || ||| Sbjct: 214 atggaggctagcgcggggctggtggccggctcgcataaccggaacgagctggtggtgatc 273 Query: 200 cgccgcgac 208 ||||||||| Sbjct: 274 cgccgcgac 282
>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0669H03 Length = 167878 Score = 135 bits (68), Expect = 1e-28 Identities = 143/168 (85%) Strand = Plus / Plus Query: 250 ggcgtgccagatttgcggggacgacctggggctcggccccggcggcgaccccttcgtcgc 309 |||||||||||| ||||| |||||| | ||| || |||| ||| || || ||||| || Sbjct: 61095 ggcgtgccagatatgcggcgacgacgtcggggaagggcccgacggggagccgttcgtggc 61154 Query: 310 ctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgaggg 369 |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| Sbjct: 61155 gtgcaacgagtgcgccttccccgtctgccgcaactgctacgactacgagcgccgcgaggg 61214 Query: 370 cacccaggactgcccacagtgcaagaccagatacaagcgcctcaaggg 417 | | |||| ||||| |||||||||||| | | ||||||||||||||| Sbjct: 61215 ctcgcaggcttgcccccagtgcaagacccgcttcaagcgcctcaaggg 61262 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 140 atggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagct 189 |||||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 60976 atggaggcgagcgcggggctggtggcggggtcgcacaaccggaacgagct 61025
>gb|AY483151.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA3) mRNA, partial cds Length = 3362 Score = 107 bits (54), Expect = 3e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||| | ||||| ||||||| ||| |||||||||||||||||||| ||||||||| Sbjct: 51 cggcgagctcttcgccgcctgcgacgtctgcgccttccccgtctgccggccctgctacga 110 Query: 352 gtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcct 411 ||||||||| ||||||||||||| |||||| ||||||||||||| |||||||||| Sbjct: 111 gtacgagcgcaaggagggcacccaggcctgcccgcagtgcaagaccaagtacaagcgcca 170 Query: 412 caaggg 417 |||||| Sbjct: 171 caaggg 176
>gb|DQ014506.1| Eucalyptus grandis cellulose synthase 2 (CesA2) mRNA, complete cds Length = 3471 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 302 ttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcga 361 |||||||||||| ||||||||| |||||||||||||||| |||||||| |||||||| Sbjct: 250 ttcgtcgcctgccacgagtgcggcttccccgtctgccgcccctgctacgtctacgagcgc 309 Query: 362 cgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcctcaaggggtgc 421 |||| ||||||||| |||||| |||||||| || | |||||||||| ||| |||||| Sbjct: 310 agcgacggcacccagtgctgcccccagtgcaacgcccgctacaagcgccacaaagggtgc 369
>gb|AY372244.1| Zea mays cellulose synthase catalytic subunit 10 (CesA10) mRNA, complete cds Length = 3470 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 299 cccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgag 358 |||||||| || ||| |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 194 cccttcgtggcgtgcgccgagtgcggcttccccgtctgccggccctgctacgagtacgag 253 Query: 359 cgacgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcc 410 || |||||||||| ||| |||||| |||||||| ||| | |||||||||| Sbjct: 254 cgcagcgagggcacgcagtgctgcccgcagtgcaacacccgctacaagcgcc 305
>gb|AY483155.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 3745 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 305 gtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 375 gtcgcctgcaacgagtgcgccttcccggtctgccgcccttgctacgagtacgagcg 430 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 154 ggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgc 202 |||| |||| ||||| |||||||||||||||||| ||||| | |||||| Sbjct: 218 ggggatggtcgccgggtcgcacaaccgcaacgagttcgtcatgatccgc 266 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 cagtgcaagaccagatacaag 406 ||||||||||||||||||||| Sbjct: 456 cagtgcaagaccagatacaag 476
>ref|NM_196933.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase (OSJNBa0006L06.10), mRNA Length = 3408 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 343 ctgctacgagtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagata 402 |||||||||||||||||| |||||||||||||| |||||| |||||||| ||| | || Sbjct: 141 ctgctacgagtacgagcgcagcgagggcacccagtgctgcccccagtgcaacacccgcta 200 Query: 403 caagcgcctcaaggggtgc 421 |||||||| ||| |||||| Sbjct: 201 caagcgccacaaagggtgc 219
>dbj|AK072259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009D02, full insert sequence Length = 3426 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 343 ctgctacgagtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagata 402 |||||||||||||||||| |||||||||||||| |||||| |||||||| ||| | || Sbjct: 174 ctgctacgagtacgagcgcagcgagggcacccagtgctgcccccagtgcaacacccgcta 233 Query: 403 caagcgcctcaaggggtgc 421 |||||||| ||| |||||| Sbjct: 234 caagcgccacaaagggtgc 252
>ref|XM_477093.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3954 Score = 73.8 bits (37), Expect = 4e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 302 ttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcga 361 |||| ||||||| ||| |||| |||||| || |||||| |||||||||||||||||| Sbjct: 539 ttcgccgcctgcgacgtctgcggcttcccggtgtgccgcccctgctacgagtacgagcgc 598 Query: 362 cgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcctcaagggg 418 || |||||||||| ||||| ||||||||||||| |||||||||| ||||||| Sbjct: 599 aaggatggcacccaggcttgcccccagtgcaagaccaagtacaagcgccacaagggg 655
>dbj|AK072356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059I02, full insert sequence Length = 3954 Score = 73.8 bits (37), Expect = 4e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 302 ttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcga 361 |||| ||||||| ||| |||| |||||| || |||||| |||||||||||||||||| Sbjct: 539 ttcgccgcctgcgacgtctgcggcttcccggtgtgccgcccctgctacgagtacgagcgc 598 Query: 362 cgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcctcaagggg 418 || |||||||||| ||||| ||||||||||||| |||||||||| ||||||| Sbjct: 599 aaggatggcacccaggcttgcccccagtgcaagaccaagtacaagcgccacaagggg 655
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 343 ctgctacgagtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagata 402 |||||||||||||||||| |||||||||||||| |||||| |||||||| ||| | || Sbjct: 91774 ctgctacgagtacgagcgcagcgagggcacccagtgctgcccccagtgcaacacccgcta 91833 Query: 403 caagcgcc 410 |||||||| Sbjct: 91834 caagcgcc 91841
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 343 ctgctacgagtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagata 402 |||||||||||||||||| |||||||||||||| |||||| |||||||| ||| | || Sbjct: 16747257 ctgctacgagtacgagcgcagcgagggcacccagtgctgcccccagtgcaacacccgcta 16747316 Query: 403 caagcgcc 410 |||||||| Sbjct: 16747317 caagcgcc 16747324
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 302 ttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcga 361 |||| ||||||| ||| |||| |||||| || |||||| |||||||||||||||||| Sbjct: 32552 ttcgccgcctgcgacgtctgcggcttcccggtgtgccgcccctgctacgagtacgagcgc 32493 Query: 362 cgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcctcaaggg 417 || |||||||||| ||||| ||||||||||||| |||||||||| |||||| Sbjct: 32492 aaggatggcacccaggcttgcccccagtgcaagaccaagtacaagcgccacaaggg 32437
>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1559_F09 Length = 87792 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 302 ttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcga 361 |||| ||||||| ||| |||| |||||| || |||||| |||||||||||||||||| Sbjct: 64778 ttcgccgcctgcgacgtctgcggcttcccggtgtgccgcccctgctacgagtacgagcgc 64719 Query: 362 cgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcctcaaggg 417 || |||||||||| ||||| ||||||||||||| |||||||||| |||||| Sbjct: 64718 aaggatggcacccaggcttgcccccagtgcaagaccaagtacaagcgccacaaggg 64663
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 343 ctgctacgagtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagata 402 |||||||||||||||||| |||||||||||||| |||||| |||||||| ||| | || Sbjct: 16756297 ctgctacgagtacgagcgcagcgagggcacccagtgctgcccccagtgcaacacccgcta 16756356 Query: 403 caagcgcc 410 |||||||| Sbjct: 16756357 caagcgcc 16756364
>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08, complete sequence Length = 144781 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| || Sbjct: 132994 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaaggaa 132935 Query: 368 ggcacccaggactgcccacagtgcaagaccagatacaag 406 || | |||| |||||| ||||||||||| ||||||||| Sbjct: 132934 gggaaccagtgctgcccccagtgcaagactagatacaag 132896
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| || Sbjct: 21837 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaaggaa 21778 Query: 368 ggcacccaggactgcccacagtgcaagaccagatacaag 406 || | |||| |||||| ||||||||||| ||||||||| Sbjct: 21777 gggaaccagtgctgcccccagtgcaagactagatacaag 21739
>gb|DQ160224.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 4070 Score = 69.9 bits (35), Expect = 6e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 139 catggaggccagcgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcat 198 ||||||||||| |||||| ||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 160 catggaggccaatgcggggttggtggcgggctcgcacaaccgcaatgagctggttgtcat 219 Query: 199 ccg 201 ||| Sbjct: 220 ccg 222
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| || Sbjct: 4511370 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaaggaa 4511311 Query: 368 ggcacccaggactgcccacagtgcaagaccagatacaag 406 || | |||| |||||| ||||||||||| ||||||||| Sbjct: 4511310 gggaaccagtgctgcccccagtgcaagactagatacaag 4511272
>dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085K01, full insert sequence Length = 3768 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| || Sbjct: 361 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaaggaa 420 Query: 368 ggcacccaggactgcccacagtgcaagaccagatacaag 406 || | |||| |||||| ||||||||||| ||||||||| Sbjct: 421 gggaaccagtgctgcccccagtgcaagactagatacaag 459
>dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034D20, full insert sequence Length = 3897 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| || Sbjct: 361 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaaggaa 420 Query: 368 ggcacccaggactgcccacagtgcaagaccagatacaag 406 || | |||| |||||| ||||||||||| ||||||||| Sbjct: 421 gggaaccagtgctgcccccagtgcaagactagatacaag 459
>dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125F05, full insert sequence Length = 3801 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| || Sbjct: 361 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaaggaa 420 Query: 368 ggcacccaggactgcccacagtgcaagaccagatacaag 406 || | |||| |||||| ||||||||||| ||||||||| Sbjct: 421 gggaaccagtgctgcccccagtgcaagactagatacaag 459
>dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091P03, full insert sequence Length = 3732 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| || Sbjct: 361 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaaggaa 420 Query: 368 ggcacccaggactgcccacagtgcaagaccagatacaag 406 || | |||| |||||| ||||||||||| ||||||||| Sbjct: 421 gggaaccagtgctgcccccagtgcaagactagatacaag 459
>dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B06, full insert sequence Length = 3764 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| || Sbjct: 361 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaaggaa 420 Query: 368 ggcacccaggactgcccacagtgcaagaccagatacaag 406 || | |||| |||||| ||||||||||| ||||||||| Sbjct: 421 gggaaccagtgctgcccccagtgcaagactagatacaag 459
>dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125H24, full insert sequence Length = 3802 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| || Sbjct: 361 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaaggaa 420 Query: 368 ggcacccaggactgcccacagtgcaagaccagatacaag 406 || | |||| |||||| ||||||||||| ||||||||| Sbjct: 421 gggaaccagtgctgcccccagtgcaagactagatacaag 459
>dbj|AK067850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123A09, full insert sequence Length = 1444 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| || Sbjct: 364 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaaggaa 423 Query: 368 ggcacccaggactgcccacagtgcaagaccagatacaag 406 || | |||| |||||| ||||||||||| ||||||||| Sbjct: 424 gggaaccagtgctgcccccagtgcaagactagatacaag 462
>gb|AF030052.1|AF030052 Oryza sativa subsp. japonica RSW1-like cellulose synthase catalytic subunit mRNA, partial cds Length = 1838 Score = 69.9 bits (35), Expect = 6e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||| |||||||||||||| ||||||||| ||||||||||||||||| || Sbjct: 264 gcctgcaatgagtgcgccttcccggtctgccgcccttgctacgagtacgagcgcaaggaa 323 Query: 368 ggcacccaggactgcccacagtgcaagaccagatacaag 406 || | |||| |||||| ||||||||||| ||||||||| Sbjct: 324 gggaaccagtgctgcccccagtgcaagactagatacaag 362
>gb|AY483150.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA1) mRNA, complete cds Length = 3605 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 325 cttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggactgccc 384 |||||| ||||||||| |||||||||| ||||||| ||||||||||||| ||||| Sbjct: 186 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 245 Query: 385 acagtgcaagaccagatacaagcgcc 410 ||||||||||||| |||||||||| Sbjct: 246 ccagtgcaagaccaagtacaagcgcc 271
>gb|BT009438.1| Triticum aestivum clone wlmk4.pk0015.a11:fis, full insert mRNA sequence Length = 3626 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 325 cttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggactgccc 384 |||||| ||||||||| |||||||||| ||||||| ||||||||||||| ||||| Sbjct: 185 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 244 Query: 385 acagtgcaagaccagatacaagcgcc 410 ||||||||||||| |||||||||| Sbjct: 245 ccagtgcaagaccaagtacaagcgcc 270
>dbj|AB158407.1| Triticum aestivum CesA mRNA for putative cellulose synthase, complete cds Length = 3681 Score = 67.9 bits (34), Expect = 3e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 325 cttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggactgccc 384 |||||| ||||||||| |||||||||| ||||||| ||||||||||||| ||||| Sbjct: 211 cttcccggtctgccgcccctgctacgagcacgagcgcaaggagggcacccaggcctgcct 270 Query: 385 acagtgcaagaccagatacaagcgcc 410 ||||||||||||| |||||||||| Sbjct: 271 ccagtgcaagaccaagtacaagcgcc 296
>gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mRNA, complete cds Length = 3752 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 154 ggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgccgcgacgg 210 |||| ||||||| ||||||||||||||||||||| ||||| | ||||||| |||||| Sbjct: 197 ggggatggtggcgggctcgcacaaccgcaacgagttcgtcatgatccgccacgacgg 253 Score = 46.1 bits (23), Expect = 0.094 Identities = 80/99 (80%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||| ||||| |||||||| ||||||||| ||||| ||||| ||||| ||| Sbjct: 357 gcctgcaatgagtgtgccttccctgtctgccgcccatgctatgagtatgagcgcaaggag 416 Query: 368 ggcacccaggactgcccacagtgcaagaccagatacaag 406 || | ||| |||||| ||||||||||| ||||||||| Sbjct: 417 gggaaccaatgctgcccccagtgcaagactagatacaag 455
>gb|AY110415.1| Zea mays CL1166_1 mRNA sequence Length = 3898 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 154 ggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgccgcgacgg 210 |||| ||||||| ||||||||||||||||||||| ||||| | ||||||| |||||| Sbjct: 203 ggggatggtggcgggctcgcacaaccgcaacgagttcgtcatgatccgccacgacgg 259 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||| ||||| |||||||| ||||||||| ||||| ||||||||||| ||| Sbjct: 363 gcctgcaatgagtgtgccttccctgtctgccgcccttgctatgagtacgagcgcaaggag 422 Query: 368 ggcacccaggactgcccacagtgcaagaccagatacaag 406 || | ||| |||||| ||||||||||| ||||||||| Sbjct: 423 gggaaccaatgctgccctcagtgcaagactagatacaag 461
>gb|DQ020208.1| Bambusa oldhamii cellulose synthase BoCesA1b mRNA, complete cds Length = 3453 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 159 tggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgccgcgacgg 210 ||||||| ||||||||||||||||||||| ||||| | ||||||| |||||| Sbjct: 193 tggtggcgggctcgcacaaccgcaacgagttcgtcatgatccgccacgacgg 244 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 311 tgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggc 370 ||||| |||||||||||||| ||||||||| ||||| ||||||||||| || || Sbjct: 351 tgcaatgagtgcgccttcccggtctgccgcccttgctatgagtacgagcgcaaggaaggg 410 Query: 371 acccaggactgcccacagtgcaagaccagatacaag 406 | |||| |||||| ||||||||||| ||||||||| Sbjct: 411 aaccagtgctgccctcagtgcaagactagatacaag 446
>gb|DQ020207.1| Bambusa oldhamii cellulose synthase BoCesA1a mRNA, complete cds Length = 3547 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgag 367 |||||||| |||||||||||||| ||||||||| ||||| ||||||||||| || Sbjct: 191 gcctgcaatgagtgcgccttcccggtctgccgcccttgctatgagtacgagcgcaaggaa 250 Query: 368 ggcacccaggactgcccacagtgcaagaccagatacaag 406 || | |||| |||||| ||||||||||| ||||||||| Sbjct: 251 gggaaccagtgctgccctcagtgcaagactagatacaag 289 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 151 cgcggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgccgcgacgg 210 ||||||| ||||||| ||||| | ||||||||||||| ||||| | ||||||| |||||| Sbjct: 28 cgcggggatggtggcgggctcacgcaaccgcaacgagttcgtcatgatccgccacgacgg 87
>gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 (CesA-5) mRNA, complete cds Length = 3676 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||||| |||| ||||||| ||| |||| ||||||||| |||||| |||||||| Sbjct: 343 cggcgacctcttcaccgcctgcgacgtctgcggcttccccgtgtgccgcccatgctacga 402 Query: 352 gtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcc 410 ||||||||| || |||||||||| ||||| ||||||||||| | |||||||||| Sbjct: 403 gtacgagcgcaaggacggcacccaggcgtgcccgcagtgcaagactaagtacaagcgcc 461
>gb|AY110079.1| Zea mays CL1164_1 mRNA sequence Length = 3696 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 292 cggcgaccccttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacga 351 |||||||| |||| ||||||| ||| |||| ||||||||| |||||| |||||||| Sbjct: 343 cggcgacctcttcaccgcctgcgacgtctgcggcttccccgtgtgccgcccatgctacga 402 Query: 352 gtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcc 410 ||||||||| || |||||||||| ||||| ||||||||||| | |||||||||| Sbjct: 403 gtacgagcgcaaggacggcacccaggcgtgcccgcagtgcaagactaagtacaagcgcc 461
>dbj|AP004509.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT16K17, TM0037a, complete sequence Length = 84322 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 373 ccaggactgcccacagtgcaagaccagatacaagcgcctcaa 414 |||| |||| |||||||||||||||||||||||||| ||||| Sbjct: 49237 ccagaactgtccacagtgcaagaccagatacaagcgtctcaa 49196
>gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mRNA, complete cds Length = 3725 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 154 ggggctggtggccggctcgcacaaccgcaacgagctcgtcgtcatccgccgcgacgg 210 |||| ||||||| ||||| ||||||||||||||| ||||| | ||||||| |||||| Sbjct: 193 ggggatggtggcaggctctcacaaccgcaacgagttcgtcatgatccgccacgacgg 249 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 |||||||| ||||| |||||||| ||||||||| ||||| ||||||||||| Sbjct: 353 gcctgcaatgagtgtgccttccctgtctgccgcccttgctatgagtacgagcg 405
>gb|DQ020213.1| Bambusa oldhamii cellulose synthase BoCesA5 mRNA, complete cds Length = 3613 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 343 ctgctacgagtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagata 402 |||||||||||||||||| || |||||||||| ||||| ||||||||||||| || Sbjct: 355 ctgctacgagtacgagcgcaaggacggcacccaggcgtgcccgcagtgcaagaccaagta 414 Query: 403 caagcgcc 410 |||||||| Sbjct: 415 caagcgcc 422
>gb|AF200528.1|AF200528 Zea mays cellulose synthase-4 (CesA-4) mRNA, complete cds Length = 3745 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 343 ctgctacgagtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagata 402 |||||||||||||||||| || ||||| |||| ||||| ||||||||||||| || Sbjct: 463 ctgctacgagtacgagcgcaaggacggcacgcaggcgtgcccccagtgcaagaccaagta 522 Query: 403 caagcgcctcaagggg 418 |||||||| ||||||| Sbjct: 523 caagcgccacaagggg 538
>gb|AY108113.1| Zea mays PCO126465 mRNA sequence Length = 3763 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 343 ctgctacgagtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagata 402 |||||||||||||||||| || ||||| |||| ||||| ||||||||||||| || Sbjct: 481 ctgctacgagtacgagcgcaaggacggcacgcaggcgtgcccccagtgcaagaccaagta 540 Query: 403 caagcgcctcaagggg 418 |||||||| ||||||| Sbjct: 541 caagcgccacaagggg 556
>ref|XM_470040.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3607 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 344 tgctacgagtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagatac 403 ||||||||||||||||| || |||| ||||| ||||| ||||||||||||| ||| Sbjct: 512 tgctacgagtacgagcgcaaggacggcagccaggcgtgcccgcagtgcaagaccaagtac 571 Query: 404 aagcgcctcaagggg 418 ||||||| ||||||| Sbjct: 572 aagcgccacaagggg 586
>gb|AY573575.1| Populus tremula x Populus tremuloides cellulose synthase (CesA4) mRNA, complete cds Length = 3778 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 380 tgcccacagtgcaagaccagatacaagcgcctcaa 414 ||||| || |||||||||||||||||||||||||| Sbjct: 439 tgccctcaatgcaagaccagatacaagcgcctcaa 473
>gb|AY221087.1| Solanum tuberosum cellulose synthase (StCesA3) mRNA, complete cds Length = 3997 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 380 tgcccacagtgcaagaccagatacaag 406 ||||||||||||||||||||||||||| Sbjct: 515 tgcccacagtgcaagaccagatacaag 541
>gb|AC137522.11| Medicago truncatula clone mth2-9h8, complete sequence Length = 117720 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 344 tgctacgagtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagatac 403 |||||||||||||||||| || || | |||| |||||| ||||||||||| |||||| Sbjct: 98135 tgctacgagtacgagcgaaaagaagggaatcaggcctgccctcagtgcaagactagatac 98076 Query: 404 aagcgcctcaa 414 || |||||||| Sbjct: 98075 aaacgcctcaa 98065
>gb|AY162180.1| Populus tremuloides cellulose synthase (CesA7) mRNA, complete cds Length = 3809 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 380 tgcccacagtgcaagaccagatacaagcgcctcaa 414 ||||| || |||||||||||||||||||||||||| Sbjct: 405 tgccctcaatgcaagaccagatacaagcgcctcaa 439
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 4e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggac 379 |||| |||||| || |||||| |||||| |||||||||||| || ||| |||||| Sbjct: 288476 tgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatggcgcccaggct 288535 Query: 380 tgcccacagtgcaagaccagatacaagcgcc 410 ||||| ||||||||||||| |||||||||| Sbjct: 288536 tgcccccagtgcaagaccaagtacaagcgcc 288566
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 54.0 bits (27), Expect = 4e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggac 379 |||| |||||| || |||||| |||||| |||||||||||| || ||| |||||| Sbjct: 40314 tgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatggcgcccaggct 40373 Query: 380 tgcccacagtgcaagaccagatacaagcgcc 410 ||||| ||||||||||||| |||||||||| Sbjct: 40374 tgcccccagtgcaagaccaagtacaagcgcc 40404
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 54.0 bits (27), Expect = 4e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggac 379 |||| |||||| || |||||| |||||| |||||||||||| || ||| |||||| Sbjct: 130146 tgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatggcgcccaggct 130205 Query: 380 tgcccacagtgcaagaccagatacaagcgcc 410 ||||| ||||||||||||| |||||||||| Sbjct: 130206 tgcccccagtgcaagaccaagtacaagcgcc 130236
>dbj|AK106913.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-A09, full insert sequence Length = 1950 Score = 54.0 bits (27), Expect = 4e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 320 tgcgccttccccgtctgccgcgactgctacgagtacgagcgacgcgagggcacccaggac 379 |||| |||||| || |||||| |||||| |||||||||||| || ||| |||||| Sbjct: 917 tgcggcttcccggtgtgccgcccctgctatgagtacgagcgaaaggatggcgcccaggct 976 Query: 380 tgcccacagtgcaagaccagatacaagcgcc 410 ||||| ||||||||||||| |||||||||| Sbjct: 977 tgcccccagtgcaagaccaagtacaagcgcc 1007
>dbj|AK069196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003G18, full insert sequence Length = 4282 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 344 tgctacgagtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagatac 403 ||||||||||||||||| || |||| ||||| ||||| ||||||||||||| ||| Sbjct: 401 tgctacgagtacgagcgcaaggacggcagccaggcgtgcccgcagtgcaagaccaagtac 460 Query: 404 aagcgcctcaagggg 418 ||||||| ||||||| Sbjct: 461 aagcgccacaagggg 475
>gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 genomic sequence, complete sequence Length = 41693 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 344 tgctacgagtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagatac 403 ||||||||||||||||| || |||| ||||| ||||| ||||||||||||| ||| Sbjct: 11031 tgctacgagtacgagcgcaaggacggcagccaggcgtgcccgcagtgcaagaccaagtac 10972 Query: 404 aagcgcctcaaggg 417 ||||||| |||||| Sbjct: 10971 aagcgccacaaggg 10958
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 344 tgctacgagtacgagcgacgcgagggcacccaggactgcccacagtgcaagaccagatac 403 ||||||||||||||||| || |||| ||||| ||||| ||||||||||||| ||| Sbjct: 16307 tgctacgagtacgagcgcaaggacggcagccaggcgtgcccgcagtgcaagaccaagtac 16366 Query: 404 aagcgcctcaaggg 417 ||||||| |||||| Sbjct: 16367 aagcgccacaaggg 16380
>gb|DQ020212.1| Bambusa oldhamii cellulose synthase BoCesA4b mRNA, partial cds Length = 3409 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 301 cttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 ||||| ||||||| ||| |||| |||||| || ||||| |||||||||||||||||| Sbjct: 54 cttcgccgcctgcgacgtctgcggcttcccggtgtgccggccctgctacgagtacgagcg 113 Query: 361 acgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcc 410 || |||||||||| ||||| ||||||||||| | |||||||||| Sbjct: 114 caaggacggcacccaggcgtgcccgcagtgcaagactaagtacaagcgcc 163
>gb|DQ020211.1| Bambusa oldhamii cellulose synthase BoCesA4a mRNA, complete cds Length = 3756 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 301 cttcgtcgcctgcaacgagtgcgccttccccgtctgccgcgactgctacgagtacgagcg 360 ||||| ||||||| ||| |||| |||||| || ||||| |||||||||||||||||| Sbjct: 398 cttcgccgcctgcgacgtctgcggcttcccggtgtgccggccctgctacgagtacgagcg 457 Query: 361 acgcgagggcacccaggactgcccacagtgcaagaccagatacaagcgcc 410 || |||||||||| ||||| ||||||||||| | |||||||||| Sbjct: 458 caaggacggcacccaggcgtgcccgcagtgcaagactaagtacaagcgcc 507
>gb|AC140546.12| Medicago truncatula clone mth2-35l19, complete sequence Length = 106962 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 386 cagtgcaagaccagatacaagcgcctcaa 414 ||||||||||||||||||||||| ||||| Sbjct: 27126 cagtgcaagaccagatacaagcgtctcaa 27154
>gb|AC150446.8| Medicago truncatula clone mth2-101n14, complete sequence Length = 109162 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 386 cagtgcaagaccagatacaagcgcctcaa 414 ||||||||||||||||||||||| ||||| Sbjct: 102914 cagtgcaagaccagatacaagcgtctcaa 102942
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds Length = 3773 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 gcctgcaacgagtgcgccttcccc 331 |||||||||||||||||||||||| Sbjct: 233 gcctgcaacgagtgcgccttcccc 256
>gb|DQ014507.1| Eucalyptus grandis cellulose synthase 3 (CesA3) mRNA, complete cds Length = 3452 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 164 gccggctcgcacaaccgcaacgagctcgtcgt 195 ||||| || ||||||||||||||||||||||| Sbjct: 58 gccggttctcacaaccgcaacgagctcgtcgt 89
>gb|BT013780.1| Lycopersicon esculentum clone 132670R, mRNA sequence Length = 3414 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 383 ccacagtgcaagaccagatacaa 405 ||||||||||||||||||||||| Sbjct: 303 ccacagtgcaagaccagatacaa 325
>gb|DQ160225.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA7) mRNA, complete cds Length = 4016 Score = 46.1 bits (23), Expect = 0.094 Identities = 32/35 (91%) Strand = Plus / Plus Query: 155 gggctggtggccggctcgcacaaccgcaacgagct 189 |||||| |||| |||||||||||||| |||||||| Sbjct: 149 gggctgctggcgggctcgcacaaccggaacgagct 183
>gb|DQ020209.1| Bambusa oldhamii cellulose synthase BoCesA2 mRNA, complete cds Length = 3648 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 305 gtcgcctgcaacgagtgcgccttccc 330 ||||||||||||||||| |||||||| Sbjct: 266 gtcgcctgcaacgagtgtgccttccc 291
>gb|AF033385.1|AF033385 Geosmithia lavendula strain NRRL 2146 internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1139 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 cggggagccaggggcgaggccgccgaagca 237 ||||| ||| |||||||||||||||||||| Sbjct: 81 cggggcgcccggggcgaggccgccgaagca 52
>gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds Length = 3277 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 386 cagtgcaagaccagatacaagcgcctcaa 414 ||||||||||| ||||||||||| ||||| Sbjct: 261 cagtgcaagactagatacaagcgtctcaa 289 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 158 ctggtggccggctcgcacaaccgcaacgagctcgtcgtcat 198 ||||| || ||||| ||||||||||||||||| || ||||| Sbjct: 39 ctggtcgcaggctctcacaaccgcaacgagcttgttgtcat 79
>gb|DQ014510.1| Eucalyptus grandis cellulose synthase 6 (CesA6) mRNA, complete cds Length = 3782 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 167 ggctcgcacaaccgcaacgagctcgtcgtcatccgccgcga 207 ||||| |||||| | |||||||| || |||||||||||||| Sbjct: 75 ggctctcacaacaggaacgagctggttgtcatccgccgcga 115
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 ccggcggcgaccccttcgtcg 308 ||||||||||||||||||||| Sbjct: 3373763 ccggcggcgaccccttcgtcg 3373783
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 gcgcggggctggtggccggct 170 ||||||||||||||||||||| Sbjct: 336302 gcgcggggctggtggccggct 336322
>dbj|AB081806.1| Streptomyces griseus chi II gene for chitinase II, partial cds Length = 2299 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 282 tcggccccggcggcgaccccttcgt 306 |||||||||||||||||||| |||| Sbjct: 764 tcggccccggcggcgaccccgtcgt 788
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome Length = 150715 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggccagcgcggggctggtggccgg 168 |||| ||||||||||||||||||| Sbjct: 138025 ggccggcgcggggctggtggccgg 138048
>gb|AC115006.12| Mus musculus chromosome 8, clone RP24-184D21, complete sequence Length = 163874 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 gactgcccacagtgcaagac 396 |||||||||||||||||||| Sbjct: 52095 gactgcccacagtgcaagac 52076
>ref|XM_468275.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2598 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cggccccggcggcgacccct 302 |||||||||||||||||||| Sbjct: 156 cggccccggcggcgacccct 175
>ref|XM_517018.1| PREDICTED: Pan troglodytes aminomethyltransferase (glycine cleavage system protein T) (LOC461012), mRNA Length = 2169 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgtcgcctgcaacgagtgc 322 |||||||||||||||||||| Sbjct: 850 tcgtcgcctgcaacgagtgc 831
>ref|NM_000481.2| Homo sapiens aminomethyltransferase (glycine cleavage system protein T) (AMT), mRNA Length = 2117 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgtcgcctgcaacgagtgc 322 |||||||||||||||||||| Sbjct: 130 tcgtcgcctgcaacgagtgc 111
>gb|L21196.1|RERCOBLMK Rhodococcus erythropolis CobL (cobL), S-adenosylmethionine-dependent methylase (cobM), and precorrin-6x reductase (cobK) genes, complete cds; and unknown genes Length = 5753 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 tggggctcggccccggcggc 295 |||||||||||||||||||| Sbjct: 1105 tggggctcggccccggcggc 1124
>gb|DQ489295.1| Acremonium alternatum strain ES08 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 507 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 61 ggggcgaggccgccgaagca 42
>emb|AJ578481.1|GLA578481 Geosmithia langdonii 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, isolate AK 142/98 Length = 549 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 67 ggggcgaggccgccgaagca 48
>emb|AJ578480.1|GLA578480 Geosmithia langdonii 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, isolate MK 127 Length = 549 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 67 ggggcgaggccgccgaagca 48
>gb|AC140307.3| Mus musculus BAC clone RP23-389D15 from chromosome 19, complete sequence Length = 187731 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cagtgcaagaccagatacaa 405 |||||||||||||||||||| Sbjct: 65868 cagtgcaagaccagatacaa 65849
>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12 Length = 340900 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 gctggtggccggctcgcacaaccg 180 |||||||||||||||||| ||||| Sbjct: 33251 gctggtggccggctcgcagaaccg 33228
>gb|AE004327.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 235 of 251 of the complete chromosome Length = 16140 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 actgcccacagtgcaagacc 397 |||||||||||||||||||| Sbjct: 9796 actgcccacagtgcaagacc 9777
>ref|NM_032316.3| Homo sapiens nicolin 1 (NICN1), mRNA Length = 3227 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgtcgcctgcaacgagtgc 322 |||||||||||||||||||| Sbjct: 3110 tcgtcgcctgcaacgagtgc 3091
>gb|AY138844.1| Acremonium strictum genogroup II strain UW 836 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 574 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 92 ggggcgaggccgccgaagca 73
>emb|AJ628350.1| Geosmithia putterillii 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, isolate CCF3442 Length = 568 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 67 ggggcgaggccgccgaagca 48
>emb|AJ578489.1|GPA578489 Geosmithia pallida 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, isolate IMI 051240b Length = 548 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 67 ggggcgaggccgccgaagca 48
>emb|AJ578488.1|GPA578488 Geosmithia pallida 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, isolate CCF 2809 Length = 547 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 67 ggggcgaggccgccgaagca 48
>emb|AJ578487.1|GPA578487 Geosmithia pallida 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, isolate CCF 3341 Length = 547 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 67 ggggcgaggccgccgaagca 48
>emb|AJ578486.1|GPA578486 Geosmithia pallida 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, isolate NRRL 2037 Length = 547 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 67 ggggcgaggccgccgaagca 48
>emb|AJ578485.1|GPA578485 Geosmithia pallida 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, isolate CCF 3340 Length = 547 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 67 ggggcgaggccgccgaagca 48
>emb|AJ578484.1|GFL578484 Geosmithia flava 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, isolate IMI 224697 Length = 550 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 67 ggggcgaggccgccgaagca 48
>emb|AJ578483.1|GFL578483 Geosmithia flava 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, isolate CCF 3333 Length = 547 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 66 ggggcgaggccgccgaagca 47
>gb|AC104452.2| Homo sapiens chromosome 3 clone RP11-949J7, complete sequence Length = 186563 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgtcgcctgcaacgagtgc 322 |||||||||||||||||||| Sbjct: 145008 tcgtcgcctgcaacgagtgc 144989
>dbj|AK096062.1| Homo sapiens cDNA FLJ38743 fis, clone KIDNE2012025, highly similar to AMINOMETHYLTRANSFERASE PRECURSOR (EC 2.1.2.10) Length = 2038 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgtcgcctgcaacgagtgc 322 |||||||||||||||||||| Sbjct: 80 tcgtcgcctgcaacgagtgc 61
>gb|AY787701.1| Geosmithia sp. olrim907 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 492 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 452 ggggcgaggccgccgaagca 471
>gb|AF449714.1|AF449714 Cercopithecine herpesvirus 2 unique short region, partial sequence Length = 9811 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ggccagcgcggggctggtggccgg 168 |||| ||||||||||||||||||| Sbjct: 4976 ggccggcgcggggctggtggccgg 4999
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cggccccggcggcgacccct 302 |||||||||||||||||||| Sbjct: 33958846 cggccccggcggcgacccct 33958827
>gb|AF033384.1|AF033384 Geosmithia putterillii strain NRRL 2024 internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 1134 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 71 ggggcgaggccgccgaagca 52
>dbj|D14686.2| Homo sapiens AMT gene for glycine cleavage system T-protein, complete cds Length = 5129 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgtcgcctgcaacgagtgc 322 |||||||||||||||||||| Sbjct: 731 tcgtcgcctgcaacgagtgc 712
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ggctcggccccggcggcgac 298 |||||||||||||||||||| Sbjct: 6260905 ggctcggccccggcggcgac 6260924
>emb|AJ621772.1| Acremonium sclerotigenum 5.8S rRNA gene, ITS1 and ITS2, strain CBS 124.42 Length = 486 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 63 ggggcgaggccgccgaagca 44
>gb|AE005123.1| Halobacterium sp. NRC-1 section 154 of 170 of the complete genome Length = 11202 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cggccccggcggcgacccct 302 |||||||||||||||||||| Sbjct: 441 cggccccggcggcgacccct 460
>dbj|AP003975.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_E04 Length = 133621 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cggccccggcggcgacccct 302 |||||||||||||||||||| Sbjct: 117809 cggccccggcggcgacccct 117790
>dbj|AB158290.1| Acremonium sp. KMU 4529 gene for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence Length = 535 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 73 ggggcgaggccgccgaagca 54
>dbj|AB158289.1| Acremonium sp. KMU 4528 gene for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence Length = 535 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 73 ggggcgaggccgccgaagca 54
>dbj|AK073980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076G02, full insert sequence Length = 2597 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 cggccccggcggcgacccct 302 |||||||||||||||||||| Sbjct: 155 cggccccggcggcgacccct 174
>gb|AY566992.1| Acremonium alternatum strain CBS 233.70 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 518 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 67 ggggcgaggccgccgaagca 48
>dbj|D13811.1|HUMGCSTP Homo sapiens mRNA for glycine cleavage system T-protein, complete cds Length = 2102 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 tcgtcgcctgcaacgagtgc 322 |||||||||||||||||||| Sbjct: 130 tcgtcgcctgcaacgagtgc 111
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 cctggggctcggccccggcg 293 |||||||||||||||||||| Sbjct: 1742506 cctggggctcggccccggcg 1742487
>emb|AJ578482.1|GAL578482 Geosmithia fassatiae 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, isolate AK 14/93 Length = 550 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 67 ggggcgaggccgccgaagca 48
>emb|AM176743.1| Penicillium sp. JS1070 18S rRNA gene (partial), ITS1, 5.8S rRNA gene, ITS2 and 26S rRNA gene (partial), isolate 1070 Length = 535 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 73 ggggcgaggccgccgaagca 54
>emb|AM176682.1| Acremonium strictum 18S rRNA gene (partial), ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene (partial), isolate 1070 Length = 535 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 73 ggggcgaggccgccgaagca 54
>emb|AM176679.1| Acremonium alternatum 18S rRNA gene (partial), ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene (partial), isolate 1039 Length = 535 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 73 ggggcgaggccgccgaagca 54
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cagcgcggggctggtggccg 167 |||||||||||||||||||| Sbjct: 579806 cagcgcggggctggtggccg 579825
>gb|U57674.1|AAU57674 Acremonium alternatum rDNA internal transcribed spacers 1 and 2 and 5.8S rRNA gene Length = 576 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggggcgaggccgccgaagca 237 |||||||||||||||||||| Sbjct: 94 ggggcgaggccgccgaagca 75 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,196,664 Number of Sequences: 3902068 Number of extensions: 2196664 Number of successful extensions: 46460 Number of sequences better than 10.0: 137 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 45606 Number of HSP's gapped (non-prelim): 825 length of query: 432 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 410 effective length of database: 17,147,199,772 effective search space: 7030351906520 effective search space used: 7030351906520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
