Clone Name | bastl56c11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TRIP6_HUMAN (Q15654) Thyroid receptor-interacting protein 6 (TRI... | 28 | 8.7 |
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>TRIP6_HUMAN (Q15654) Thyroid receptor-interacting protein 6 (TRIP6)| (OPA-interacting protein 1) (Zyxin-related protein 1) (ZRP-1) Length = 476 Score = 28.5 bits (62), Expect = 8.7 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = +2 Query: 38 TIKPNPTSPLPAFPF 82 ++KPNP SPLPA P+ Sbjct: 135 SLKPNPASPLPASPY 149 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,273,292 Number of Sequences: 219361 Number of extensions: 301795 Number of successful extensions: 1069 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1022 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1069 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)