ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl56c11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 Score = 119 bits (60), Expect = 8e-24 Identities = 75/80 (93%) Strand = Plus / Plus Query: 381 gcggcggggcgccgcaggtggacacgggcaagtacgtgcgctacacccccgagcaggtgg 440 |||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 91176 gcggaggggcgccgcaagtggacacgggcaagtacgtgcgctacaccccggagcaggtgg 91235 Query: 441 atgcgctggagcgcgtctac 460 | ||||||||||| |||||| Sbjct: 91236 aggcgctggagcgggtctac 91255 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 ggcatgacgcggcggcgaccctggccctggctc 221 ||||||||||||||||| || ||||| |||||| Sbjct: 90967 ggcatgacgcggcggcgcccgtggccgtggctc 90999
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 119 bits (60), Expect = 8e-24 Identities = 75/80 (93%) Strand = Plus / Minus Query: 381 gcggcggggcgccgcaggtggacacgggcaagtacgtgcgctacacccccgagcaggtgg 440 |||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 24544684 gcggaggggcgccgcaagtggacacgggcaagtacgtgcgctacaccccggagcaggtgg 24544625 Query: 441 atgcgctggagcgcgtctac 460 | ||||||||||| |||||| Sbjct: 24544624 aggcgctggagcgggtctac 24544605 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||||| |||||| || | |||||||| ||||||||||| Sbjct: 31566247 ggcaagtacgtgcactacacgccgggtcaggtggaggcgctggagcg 31566293 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 416 gtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||| || ||||||||||| ||||| ||||| Sbjct: 529286 gtgcgctacacgcctgagcaggtggaggcgcttgagcg 529323 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 189 ggcatgacgcggcggcgaccctggccctggctc 221 ||||||||||||||||| || ||||| |||||| Sbjct: 24544893 ggcatgacgcggcggcgcccgtggccgtggctc 24544861 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ccggcggcggcagcggcggg 388 |||||||||||||||||||| Sbjct: 35256183 ccggcggcggcagcggcggg 35256202 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 34048889 cggcggcggcagcggcgggg 34048870 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 32061883 cggcggcggcagcggcgggg 32061864 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 369 ccggcggcggcagcggcggggcgc 392 ||||||||||| |||||||||||| Sbjct: 30323317 ccggcggcggcggcggcggggcgc 30323340
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 119 bits (60), Expect = 8e-24 Identities = 75/80 (93%) Strand = Plus / Minus Query: 381 gcggcggggcgccgcaggtggacacgggcaagtacgtgcgctacacccccgagcaggtgg 440 |||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 24462153 gcggaggggcgccgcaagtggacacgggcaagtacgtgcgctacaccccggagcaggtgg 24462094 Query: 441 atgcgctggagcgcgtctac 460 | ||||||||||| |||||| Sbjct: 24462093 aggcgctggagcgggtctac 24462074 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||||| |||||| || | |||||||| ||||||||||| Sbjct: 31656753 ggcaagtacgtgcactacacgccgggtcaggtggaggcgctggagcg 31656799 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 416 gtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||| || ||||||||||| ||||| ||||| Sbjct: 529284 gtgcgctacacgcctgagcaggtggaggcgcttgagcg 529321 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 189 ggcatgacgcggcggcgaccctggccctggctc 221 ||||||||||||||||| || ||||| |||||| Sbjct: 24462362 ggcatgacgcggcggcgcccgtggccgtggctc 24462330 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ccggcggcggcagcggcggg 388 |||||||||||||||||||| Sbjct: 35346255 ccggcggcggcagcggcggg 35346274 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 34139361 cggcggcggcagcggcgggg 34139342 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 32152395 cggcggcggcagcggcgggg 32152376 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 369 ccggcggcggcagcggcggggcgc 392 ||||||||||| |||||||||||| Sbjct: 30414739 ccggcggcggcggcggcggggcgc 30414762
>dbj|AK103284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124M18, full insert sequence Length = 3082 Score = 119 bits (60), Expect = 8e-24 Identities = 75/80 (93%) Strand = Plus / Plus Query: 381 gcggcggggcgccgcaggtggacacgggcaagtacgtgcgctacacccccgagcaggtgg 440 |||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 410 gcggaggggcgccgcaagtggacacgggcaagtacgtgcgctacaccccggagcaggtgg 469 Query: 441 atgcgctggagcgcgtctac 460 | ||||||||||| |||||| Sbjct: 470 aggcgctggagcgggtctac 489 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 189 ggcatgacgcggcggcgaccctggccctggctc 221 ||||||||||||||||| || ||||| |||||| Sbjct: 201 ggcatgacgcggcggcgcccgtggccgtggctc 233
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 388 ggcgccgcaggtggacacgggcaagtacgtgcgctacacccccgagcaggtggatgcgct 447 |||||||||||||||| | || |||||||| || ||||| |||||||||||||| ||||| Sbjct: 25960572 ggcgccgcaggtggacgccgggaagtacgtccggtacacgcccgagcaggtggaggcgct 25960513 Query: 448 ggagcg 453 |||||| Sbjct: 25960512 ggagcg 25960507 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaggcggcgcgcggagggca 192 |||||||||||||||||||| Sbjct: 102528 gaggcggcgcgcggagggca 102547
>dbj|AK102183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086M14, full insert sequence Length = 3140 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 388 ggcgccgcaggtggacacgggcaagtacgtgcgctacacccccgagcaggtggatgcgct 447 |||||||||||||||| | || |||||||| || ||||| |||||||||||||| ||||| Sbjct: 335 ggcgccgcaggtggacgccgggaagtacgtccggtacacgcccgagcaggtggaggcgct 394 Query: 448 ggagcg 453 |||||| Sbjct: 395 ggagcg 400
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 388 ggcgccgcaggtggacacgggcaagtacgtgcgctacacccccgagcaggtggatgcgct 447 |||||||||||||||| | || |||||||| || ||||| |||||||||||||| ||||| Sbjct: 25888750 ggcgccgcaggtggacgccgggaagtacgtccggtacacgcccgagcaggtggaggcgct 25888691 Query: 448 ggagcg 453 |||||| Sbjct: 25888690 ggagcg 25888685 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaggcggcgcgcggagggca 192 |||||||||||||||||||| Sbjct: 102528 gaggcggcgcgcggagggca 102547
>emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial sequence from BAC OJ1257_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 61296 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 388 ggcgccgcaggtggacacgggcaagtacgtgcgctacacccccgagcaggtggatgcgct 447 |||||||||||||||| | || |||||||| || ||||| |||||||||||||| ||||| Sbjct: 14717 ggcgccgcaggtggacgccgggaagtacgtccggtacacgcccgagcaggtggaggcgct 14776 Query: 448 ggagcg 453 |||||| Sbjct: 14777 ggagcg 14782
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 388 ggcgccgcaggtggacacgggcaagtacgtgcgctacacccccgagcaggtggatgcgct 447 |||||||||||||||| | || |||||||| || ||||| |||||||||||||| ||||| Sbjct: 151097 ggcgccgcaggtggacgccgggaagtacgtccggtacacgcccgagcaggtggaggcgct 151156 Query: 448 ggagcg 453 |||||| Sbjct: 151157 ggagcg 151162
>gb|DQ013803.1| Phyllostachys praecox HB1 mRNA, partial cds Length = 2623 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 405 cgggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcg 453 |||||||||||||||| ||||| || ||||||||||| ||||| ||||| Sbjct: 30 cgggcaagtacgtgcgatacacgccggagcaggtggaggcgctcgagcg 78
>ref|NM_197030.1| Oryza sativa (japonica cultivar-group) putative homeodomain leucine zipper protein (OSJNBa0093B11.11), mRNA Length = 2523 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggag 451 |||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 82 ggcaagtacgtgcggtacacgccggagcaggtggaggcgctggag 126
>gb|AY423716.1| Oryza sativa (japonica cultivar-group) homeodomain leucine-zipper protein Hox9 mRNA, complete cds Length = 3174 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggag 451 |||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 363 ggcaagtacgtgcggtacacgccggagcaggtggaggcgctggag 407
>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete sequence Length = 178692 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggag 451 |||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 103130 ggcaagtacgtgcggtacacgccggagcaggtggaggcgctggag 103086
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggag 451 |||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 17571501 ggcaagtacgtgcggtacacgccggagcaggtggaggcgctggag 17571545 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||||| ||||| || || |||||||| ||||||||||| Sbjct: 2823176 ggcaagtacgtgcagtacacgccggatcaggtggaggcgctggagcg 2823222 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 gcggcggcagcggcggggcgccgc 395 ||||||||||||| |||||||||| Sbjct: 22001684 gcggcggcagcgggggggcgccgc 22001707 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 21388264 cggcggcggcagcggcgggg 21388245 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 10139559 cggcggcggcagcggcgggg 10139540
>dbj|AK102830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109G06, full insert sequence Length = 3000 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggag 451 |||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 210 ggcaagtacgtgcggtacacgccggagcaggtggaggcgctggag 254
>dbj|AK102603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098N12, full insert sequence Length = 3227 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggag 451 |||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 434 ggcaagtacgtgcggtacacgccggagcaggtggaggcgctggag 478
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggag 451 |||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct: 17580541 ggcaagtacgtgcggtacacgccggagcaggtggaggcgctggag 17580585 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||||| ||||| || || |||||||| ||||||||||| Sbjct: 2823127 ggcaagtacgtgcagtacacgccggatcaggtggaggcgctggagcg 2823173 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 gcggcggcagcggcggggcgccgc 395 ||||||||||||| |||||||||| Sbjct: 22013347 gcggcggcagcgggggggcgccgc 22013370 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 21399527 cggcggcggcagcggcgggg 21399508 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 10145598 cggcggcggcagcggcgggg 10145579
>ref|NM_188279.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2697 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 399 tggacacgggcaagtacgtgcgctacacccccgagcaggtggatgcgctggag 451 ||||| || ||||||||||| | ||||| || ||||||||||| ||||||||| Sbjct: 23 tggacgcgagcaagtacgtgaggtacacgccggagcaggtggaggcgctggag 75
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 399 tggacacgggcaagtacgtgcgctacacccccgagcaggtggatgcgctggag 451 ||||| || ||||||||||| | ||||| || ||||||||||| ||||||||| Sbjct: 5430384 tggacgcgagcaagtacgtgaggtacacgccggagcaggtggaggcgctggag 5430332 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 8743898 cccggcggcggcagcggcgg 8743879
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1015E06 Length = 164583 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Minus Query: 399 tggacacgggcaagtacgtgcgctacacccccgagcaggtggatgcgctggag 451 ||||| || ||||||||||| | ||||| || ||||||||||| ||||||||| Sbjct: 27224 tggacgcgagcaagtacgtgaggtacacgccggagcaggtggaggcgctggag 27172
>ref|NM_194843.1| Oryza sativa (japonica cultivar-group) putative homeodomain leucine zipper protein (OSJNBb0016M10.1), mRNA Length = 654 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||||| ||||| || || |||||||| ||||||||||| Sbjct: 472 ggcaagtacgtgcagtacacgccggatcaggtggaggcgctggagcg 518
>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence Length = 150743 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||||| |||||| || | |||||||| ||||||||||| Sbjct: 114420 ggcaagtacgtgcactacacgccgggtcaggtggaggcgctggagcg 114374
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||||| |||||| || | |||||||| ||||||||||| Sbjct: 26359 ggcaagtacgtgcactacacgccgggtcaggtggaggcgctggagcg 26313
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 428 cccgagcaggtggatgcgctgga 450 ||||||||||||||||||||||| Sbjct: 123484 cccgagcaggtggatgcgctgga 123462
>gb|DQ385533.1| Physcomitrella patens class III homeodomain-leucine zipper (C3HDZ1) gene, partial cds Length = 5211 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 410 aagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgt 456 ||||| |||||||||||| |||||| ||||| || ||||||||||| Sbjct: 16 aagtatgtgcgctacaccaacgagcaagtggaagcactggagcgcgt 62
>gb|DQ385532.1| Marchantia polymorpha class III homeodomain-leucine zipper (C3HDZ1) gene, complete cds Length = 9458 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctaca 461 |||||||| ||||||||||| ||| |||||||| || ||||||||||||||| Sbjct: 46 ggcaagtatgtgcgctacacaaacgaacaggtggaggctttggagcgcgtctaca 100
>gb|DQ385520.1| Selaginella kraussiana class III homeodomain-leucine zipper protein C3HDZ2 (C3HDZ2) mRNA, complete cds Length = 2523 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctaca 461 ||||||||| | || ||||| ||||||||||| || ||| ||||||| ||||||| Sbjct: 46 ggcaagtacatacggtacacgcccgagcaggtcgaggcgttggagcgtgtctaca 100
>gb|DQ385516.1| Physcomitrella patens class III homeodomain-leucine zipper protein C3HDZ1 (C3HDZ1) mRNA, complete cds Length = 2502 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 410 aagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgt 456 ||||| |||||||||||| |||||| ||||| || ||||||||||| Sbjct: 16 aagtatgtgcgctacaccaacgagcaagtggaagcactggagcgcgt 62
>gb|DQ385514.1| Marchantia polymorpha class III homeodomain-leucine zipper protein C3HDZ1 (C3HDZ1) mRNA, complete cds Length = 2583 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctaca 461 |||||||| ||||||||||| ||| |||||||| || ||||||||||||||| Sbjct: 46 ggcaagtatgtgcgctacacaaacgaacaggtggaggctttggagcgcgtctaca 100
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||||| ||||| || || |||||||| ||||||||||| Sbjct: 4208 ggcaagtacgtgcagtacacgccggatcaggtggaggcgctggagcg 4254
>dbj|AK100250.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060H19, full insert sequence Length = 2349 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||||| |||||| || | |||||||| ||||||||||| Sbjct: 1011 ggcaagtacgtgcactacacgccgggtcaggtggaggcgctggagcg 1057
>dbj|AK059657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-D05, full insert sequence Length = 1149 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 407 ggcaagtacgtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||||| ||||| || || |||||||| ||||||||||| Sbjct: 739 ggcaagtacgtgcagtacacgccggatcaggtggaggcgctggagcg 785
>ref|XM_468564.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2574 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 416 gtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||| || ||||||||||| ||||| ||||| Sbjct: 85 gtgcgctacacgcctgagcaggtggaggcgcttgagcg 122
>ref|NM_146222.2| Mus musculus cDNA sequence BC024479 (BC024479), mRNA Length = 2307 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 365 tcgcccggcggcggcagcggcggggc 390 ||||||||||||||||| |||||||| Sbjct: 250 tcgcccggcggcggcagtggcggggc 275
>ref|XM_600204.2| PREDICTED: Bos taurus similar to potassium channel, subfamily K, member 12 (LOC521931), mRNA Length = 2867 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcggggcg 391 |||||||||||||||||||||| Sbjct: 1487 cggcggcggcagcggcggggcg 1466
>gb|AC105958.11| Mus musculus chromosome 9, clone RP24-325P4, complete sequence Length = 195129 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 365 tcgcccggcggcggcagcggcggggc 390 ||||||||||||||||| |||||||| Sbjct: 104231 tcgcccggcggcggcagtggcggggc 104256
>ref|XM_538483.2| PREDICTED: Canis familiaris similar to potassium channel, subfamily K, member 12 (LOC481362), mRNA Length = 1445 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcggggcg 391 |||||||||||||||||||||| Sbjct: 69 cggcggcggcagcggcggggcg 48
>emb|CR732076.2|CNS0GRTD Tetraodon nigroviridis full-length cDNA Length = 1324 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcggggcg 391 |||||||||||||||||||||| Sbjct: 1071 cggcggcggcagcggcggggcg 1050
>gb|AY425991.1| Oryza sativa (japonica cultivar-group) homeodomain leucine-zipper protein Hox10 mRNA, complete cds Length = 3252 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 416 gtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||| || ||||||||||| ||||| ||||| Sbjct: 495 gtgcgctacacgcctgagcaggtggaggcgcttgagcg 532
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 374 ggcggcagcggcggggcgccgc 395 |||||||||||||||||||||| Sbjct: 1757762 ggcggcagcggcggggcgccgc 1757741
>gb|AC124316.32| Mus musculus chromosome 17, clone RP24-222O13, complete sequence Length = 223552 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcggggcg 391 |||||||||||||||||||||| Sbjct: 83092 cggcggcggcagcggcggggcg 83113
>gb|AF287300.1|AF287300 Rattus norvegicus tandem pore domain potassium channel THIK-2 (Kcnk12) mRNA, complete cds Length = 1900 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcggggcg 391 |||||||||||||||||||||| Sbjct: 536 cggcggcggcagcggcggggcg 515
>ref|NM_022292.1| Rattus norvegicus potassium channel, subfamily K, member 12 (Kcnk12), mRNA Length = 1900 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcggggcg 391 |||||||||||||||||||||| Sbjct: 536 cggcggcggcagcggcggggcg 515
>ref|NM_199251.1| Mus musculus potassium channel, subfamily K, member 12 (Kcnk12), mRNA Length = 1952 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcggggcg 391 |||||||||||||||||||||| Sbjct: 587 cggcggcggcagcggcggggcg 566
>dbj|AB052939.1| Mus musculus mntk1 mRNA, complete cds Length = 1952 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcggggcg 391 |||||||||||||||||||||| Sbjct: 587 cggcggcggcagcggcggggcg 566
>dbj|AK110678.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-H01, full insert sequence Length = 989 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 416 gtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||| || ||||||||||| ||||| ||||| Sbjct: 501 gtgcgctacacgcctgagcaggtggaggcgcttgagcg 538
>dbj|AK102378.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091P14, full insert sequence Length = 3252 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 416 gtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||| || ||||||||||| ||||| ||||| Sbjct: 495 gtgcgctacacgcctgagcaggtggaggcgcttgagcg 532
>gb|BC066002.1| Mus musculus cDNA sequence BC024479, mRNA (cDNA clone MGC:90123 IMAGE:5701381), complete cds Length = 2307 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 365 tcgcccggcggcggcagcggcggggc 390 ||||||||||||||||| |||||||| Sbjct: 250 tcgcccggcggcggcagtggcggggc 275
>gb|AC073435.26| Mus musculus strain C57BL/6J chromosome 9 clone rp23-383h20, complete sequence Length = 221953 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 365 tcgcccggcggcggcagcggcggggc 390 ||||||||||||||||| |||||||| Sbjct: 213784 tcgcccggcggcggcagtggcggggc 213759
>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0043C10, complete sequence Length = 108688 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Minus Query: 416 gtgcgctacacccccgagcaggtggatgcgctggagcg 453 ||||||||||| || ||||||||||| ||||| ||||| Sbjct: 86632 gtgcgctacacgcctgagcaggtggaggcgcttgagcg 86595
>dbj|AU066557.1| Chlamydomonas sp. HS-5 mRNA for hypothetical protein, paraquat inducible, complete cds, clone:PQ2 Length = 665 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcggggcg 391 |||||||||||||||||||||| Sbjct: 172 cggcggcggcagcggcggggcg 193
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcggggc 390 ||||||||||||||||||||| Sbjct: 81706 cggcggcggcagcggcggggc 81686 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ccggcggcggcagcggcggg 388 |||||||||||||||||||| Sbjct: 142906 ccggcggcggcagcggcggg 142887
>ref|XM_522138.1| PREDICTED: Pan troglodytes similar to tripartite motif-containing 43 (LOC466739), mRNA Length = 1689 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gccctgcctctgcctctgctc 36 ||||||||||||||||||||| Sbjct: 285 gccctgcctctgcctctgctc 305
>ref|XM_521922.1| PREDICTED: Pan troglodytes similar to tripartite motif-containing 43 (LOC466523), mRNA Length = 1422 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gccctgcctctgcctctgctc 36 ||||||||||||||||||||| Sbjct: 432 gccctgcctctgcctctgctc 452
>ref|XM_479146.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1816 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 gcccggcggcggcagcggcgg 387 ||||||||||||||||||||| Sbjct: 1399 gcccggcggcggcagcggcgg 1419
>ref|XM_868865.1| PREDICTED: Bos taurus similar to FAS-associated factor 1 (FAF1 protein) (LOC616759), partial mRNA Length = 1156 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 366 cgcccggcggcggcagcggcg 386 ||||||||||||||||||||| Sbjct: 1 cgcccggcggcggcagcggcg 21
>gb|AY501430.1| Zea mays rolled leaf1 mRNA, complete cds Length = 2700 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 399 tggacacgggcaagtacgtgcgctacacccccgagca 435 ||||| |||| || ||||||||||||||||| ||||| Sbjct: 140 tggactcgggaaaatacgtgcgctacaccccggagca 176
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 cggcagcggcggggcgccgca 396 ||||||||||||||||||||| Sbjct: 522911 cggcagcggcggggcgccgca 522931
>ref|XM_751805.1| Ustilago maydis 521 hypothetical protein (UM00751.1) partial mRNA Length = 5733 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 ggcggcggcagcggcggggcg 391 ||||||||||||||||||||| Sbjct: 5530 ggcggcggcagcggcggggcg 5550
>ref|XM_532944.2| PREDICTED: Canis familiaris hypothetical LOC130733 (LOC475737), mRNA Length = 1850 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 367 gcccggcggcggcagcggcggggcg 391 ||||||||||||| ||||||||||| Sbjct: 179 gcccggcggcggccgcggcggggcg 203
>ref|XM_538738.2| PREDICTED: Canis familiaris similar to Exosome complex exonuclease RRP40 (Ribosomal RNA processing protein 40) (Exosome component 3) (p10) (LOC481616), mRNA Length = 1100 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 gcccggcggcggcagcggcgg 387 ||||||||||||||||||||| Sbjct: 270 gcccggcggcggcagcggcgg 290
>emb|AL590233.23| Human DNA sequence from clone RP13-93L13 on chromosome 9 Contains a ubiquitin-conjugating enzyme E2 pseudogene, a proliferation-associated 2G4, 38kDa (PA2G4) pseuodgene, the 5' end of the SEMA4D gene for sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D and a CpG island, complete sequence Length = 109008 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 367 gcccggcggcggcagcggcgg 387 ||||||||||||||||||||| Sbjct: 4358 gcccggcggcggcagcggcgg 4338
>gb|AC118273.4| Homo sapiens chromosome 11, clone RP11-107P7, complete sequence Length = 187529 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gccctgcctctgcctctgctc 36 ||||||||||||||||||||| Sbjct: 32838 gccctgcctctgcctctgctc 32818
>gb|AC117746.6| Homo sapiens chromosome 11, clone RP11-159C12, complete sequence Length = 157527 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gccctgcctctgcctctgctc 36 ||||||||||||||||||||| Sbjct: 134121 gccctgcctctgcctctgctc 134141
>gb|AE005750.1| Caulobacter crescentus CB15 section 76 of 359 of the complete genome Length = 11605 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 372 gcggcggcagcggcggggcgccgcaggtg 400 |||||||| |||||||||||||| ||||| Sbjct: 7578 gcggcggcggcggcggggcgccgaaggtg 7550
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 383 ggcggggcgccgcaggtggacacgg 407 ||||||||| ||||||||||||||| Sbjct: 2093192 ggcggggcggcgcaggtggacacgg 2093216 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 369 ccggcggcggcagcggcggggcgccgcag 397 ||||||||||| ||||||||||| ||||| Sbjct: 1455478 ccggcggcggcggcggcggggcggcgcag 1455506
>gb|AC084851.2| Homo sapiens chromosome 11, clone CTD-2132H18, complete sequence Length = 76534 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gccctgcctctgcctctgctc 36 ||||||||||||||||||||| Sbjct: 42859 gccctgcctctgcctctgctc 42839
>ref|XM_941875.1| PREDICTED: Homo sapiens similar to tripartite motif protein 17 (LOC652433), mRNA Length = 1353 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gccctgcctctgcctctgctc 36 ||||||||||||||||||||| Sbjct: 108 gccctgcctctgcctctgctc 128
>ref|XM_061890.10| PREDICTED: Homo sapiens tripartite motif-containing 64 (TRIM64), mRNA Length = 1704 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gccctgcctctgcctctgctc 36 ||||||||||||||||||||| Sbjct: 285 gccctgcctctgcctctgctc 305
>ref|XM_925959.1| PREDICTED: Homo sapiens similar to tripartite motif protein 17 (LOC642446), mRNA Length = 1704 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gccctgcctctgcctctgctc 36 ||||||||||||||||||||| Sbjct: 285 gccctgcctctgcctctgctc 305
>ref|XM_929704.1| PREDICTED: Homo sapiens similar to tripartite motif protein 17 (LOC646754), mRNA Length = 1353 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gccctgcctctgcctctgctc 36 ||||||||||||||||||||| Sbjct: 108 gccctgcctctgcctctgctc 128
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 gcccggcggcggcagcggcgg 387 ||||||||||||||||||||| Sbjct: 4693245 gcccggcggcggcagcggcgg 4693265 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 369 ccggcggcggcagcggcggggcgc 392 ||||||||||| |||||||||||| Sbjct: 22338351 ccggcggcggcggcggcggggcgc 22338328
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 gcccggcggcggcagcggcgg 387 ||||||||||||||||||||| Sbjct: 25205964 gcccggcggcggcagcggcgg 25205984 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 25219951 cggcggcggcagcggcgggg 25219970 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 369 ccggcggcggcagcggcggggcgc 392 ||||||||||| |||||||||||| Sbjct: 20736884 ccggcggcggcggcggcggggcgc 20736861
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcggggcgccg 394 |||||||||||||||||| |||||| Sbjct: 6532382 cggcggcggcagcggcggcgcgccg 6532358 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 3926126 cggcggcggcagcggcgggg 3926107
>gb|AC156445.2| Volvox carteri clone JGIAOBO-25P15, complete sequence Length = 31713 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 gcccggcggcggcagcggcgg 387 ||||||||||||||||||||| Sbjct: 7577 gcccggcggcggcagcggcgg 7597
>dbj|AP006446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1097H10 Length = 159732 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 gcccggcggcggcagcggcgg 387 ||||||||||||||||||||| Sbjct: 10849 gcccggcggcggcagcggcgg 10869
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 gcccggcggcggcagcggcgg 387 ||||||||||||||||||||| Sbjct: 22635 gcccggcggcggcagcggcgg 22655 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 36622 cggcggcggcagcggcgggg 36641
>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1307A11 Length = 131538 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcggggcgccg 394 |||||||||||||||||| |||||| Sbjct: 92995 cggcggcggcagcggcggcgcgccg 92971
>dbj|AK071281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086E05, full insert sequence Length = 1817 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 gcccggcggcggcagcggcgg 387 ||||||||||||||||||||| Sbjct: 1400 gcccggcggcggcagcggcgg 1420
>dbj|AK064834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F19, full insert sequence Length = 1601 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcggggc 390 ||||||||||||||||||||| Sbjct: 475 cggcggcggcagcggcggggc 455
>dbj|AK062257.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-G09, full insert sequence Length = 1508 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcggggc 390 ||||||||||||||||||||| Sbjct: 531 cggcggcggcagcggcggggc 511
>dbj|AP004607.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-529A4, complete sequence Length = 160683 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gccctgcctctgcctctgctc 36 ||||||||||||||||||||| Sbjct: 149395 gccctgcctctgcctctgctc 149375 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gccctgcctctgcctctgctc 36 ||||||||||||||||||||| Sbjct: 55115 gccctgcctctgcctctgctc 55135
>dbj|AP000827.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-716D19, complete sequence Length = 168579 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gccctgcctctgcctctgctc 36 ||||||||||||||||||||| Sbjct: 31476 gccctgcctctgcctctgctc 31456
>dbj|AP003122.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-313I2, complete sequence Length = 137888 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gccctgcctctgcctctgctc 36 ||||||||||||||||||||| Sbjct: 128919 gccctgcctctgcctctgctc 128939
>dbj|AP002342.3| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2258N2, complete sequences Length = 174548 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctcttcctcctctgcgccctg 21 ||||||||||||||||||||| Sbjct: 10084 ctcttcctcctctgcgccctg 10064
>dbj|AP003731.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-677N11, complete sequence Length = 33560 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctcttcctcctctgcgccctg 21 ||||||||||||||||||||| Sbjct: 20148 ctcttcctcctctgcgccctg 20128
>dbj|AP005435.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-81M19, complete sequence Length = 66005 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gccctgcctctgcctctgctc 36 ||||||||||||||||||||| Sbjct: 40842 gccctgcctctgcctctgctc 40822
>dbj|AP005814.2| Homo sapiens genomic DNA, chromosome 11 clone:CMF9-168M14, complete sequence Length = 39852 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gccctgcctctgcctctgctc 36 ||||||||||||||||||||| Sbjct: 3636 gccctgcctctgcctctgctc 3616
>ref|NM_187946.1| Oryza sativa (japonica cultivar-group), Ozsa8366 predicted mRNA Length = 885 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 455 cccggcggcggcagcggcgg 436
>ref|XM_482973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1880 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 285 cggcggcggcagcggcgggg 304
>ref|XM_475190.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1158 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcggggcg 391 |||||||||||| ||||||||||| Sbjct: 428 cccggcggcggcggcggcggggcg 405
>ref|XM_530793.1| PREDICTED: Pan troglodytes LOC461754 (LOC461754), mRNA Length = 1917 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 55 cccggcggcggcagcggcgg 36
>ref|NM_197811.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0057L21.6), mRNA Length = 2076 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 372 gcggcggcagcggcggggcgccgc 395 ||||||||||||| |||||||||| Sbjct: 1104 gcggcggcagcgggggggcgccgc 1081
>ref|NM_195943.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0023M11.12), mRNA Length = 972 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 162 cggcggcggcagcggcgggg 181
>gb|BT017144.1| Zea mays clone EL01N0366F12.c mRNA sequence Length = 1174 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 827 cccggcggcggcagcggcgg 808
>ref|NM_001007595.1| Homo sapiens nuclear localized factor 2 (NLF2), mRNA Length = 1329 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 ggcggcagcggcggggcgccgcag 397 ||||||||||||||||| |||||| Sbjct: 655 ggcggcagcggcggggccccgcag 632
>ref|XM_469706.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1731 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 369 ccggcggcggcagcggcggggcgc 392 ||||||||||| |||||||||||| Sbjct: 379 ccggcggcggcggcggcggggcgc 356
>ref|XM_470403.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1631 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ccggcggcggcagcggcggg 388 |||||||||||||||||||| Sbjct: 1111 ccggcggcggcagcggcggg 1092
>ref|XM_479147.1| Oryza sativa (japonica cultivar-group), mRNA Length = 492 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 345 cggcggcggcagcggcgggg 326
>ref|XM_478529.1| Oryza sativa (japonica cultivar-group), mRNA Length = 871 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 369 ccggcggcggcagcggcggggcgc 392 ||||||||||| |||||||||||| Sbjct: 245 ccggcggcggcggcggcggggcgc 268
>ref|XM_513752.1| PREDICTED: Pan troglodytes B-cell CLL/lymphoma 9 (LOC457248), mRNA Length = 4684 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 21 cccggcggcggcagcggcgg 2
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ccggcggcggcagcggcggg 388 |||||||||||||||||||| Sbjct: 126445 ccggcggcggcagcggcggg 126464
>gb|AC158958.4| Mus musculus chromosome 1, clone RP23-31E12, complete sequence Length = 213244 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cgccctgcctctgcctctgc 34 |||||||||||||||||||| Sbjct: 202559 cgccctgcctctgcctctgc 202578
>gb|AF411339.1| Homo sapiens brain-derived neurotrophic factor opposite strand (BDNFOS) gene, partial sequence; and brain-derived neurotrophic factor (BDNF) gene, complete cds Length = 115886 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 53391 cggcggcggcagcggcgggg 53372
>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012G21, complete sequence Length = 135750 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ccggcggcggcagcggcggg 388 |||||||||||||||||||| Sbjct: 30796 ccggcggcggcagcggcggg 30815
>gb|AC112988.7| Mus musculus chromosome 5, clone RP24-294H5, complete sequence Length = 151194 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gccctgcctctgcctctgct 35 |||||||||||||||||||| Sbjct: 33963 gccctgcctctgcctctgct 33944
>ref|XM_424089.1| PREDICTED: Gallus gallus similar to cytoplasmic activation/proliferation-associated protein 1; caprin-1 (LOC426445), partial mRNA Length = 1652 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 538 cccggcggcggcagcggcgg 557
>gb|AC124327.9| Mus musculus chromosome 8, clone RP24-490I13, complete sequence Length = 141781 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 94326 cggcggcggcagcggcgggg 94345
>ref|XM_594925.2| PREDICTED: Bos taurus similar to acyl-Coenzyme A binding domain containing 3 (LOC516766), mRNA Length = 1185 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcggggcgcc 393 ||||||||||||| |||||||||| Sbjct: 873 cggcggcggcagcagcggggcgcc 850
>gb|AY463276.1| Uncultured proteobacterium clone FOR14 carbon monoxide dehydrogenase form I large subunit (coxL) gene, partial cds Length = 448 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gaccctggccctggctcatc 224 |||||||||||||||||||| Sbjct: 427 gaccctggccctggctcatc 408
>ref|XM_582194.2| PREDICTED: Bos taurus similar to Homeobox protein Hox-C13 (Hox-3G), transcript variant 1 (LOC538716), mRNA Length = 1074 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 85 cggcggcggcagcggcgggg 104
>ref|XM_580301.2| PREDICTED: Bos taurus similar to adenylate cyclase 5 (LOC538432), mRNA Length = 1701 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 cggcggcagcggcggggcgc 392 |||||||||||||||||||| Sbjct: 886 cggcggcagcggcggggcgc 905
>ref|NM_011141.1| Mus musculus POU domain, class 3, transcription factor 1 (Pou3f1), mRNA Length = 1517 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 371 ggcggcggcagcggcggggcgccgcagg 398 ||||||||| ||||||||||| |||||| Sbjct: 15 ggcggcggcggcggcggggcggcgcagg 42
>ref|NM_172755.2| Mus musculus splicing factor, arginine/serine-rich 14 (Sfrs14), mRNA Length = 3891 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 375 cggcggcggcagcggcgggg 394
>gb|BC045986.1| Danio rerio makorin, ring finger protein, 2, mRNA (cDNA clone MGC:56198 IMAGE:5600186), complete cds Length = 1519 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 539 cccggcggcggcagcggcgg 520
>ref|NM_194268.1| Mus musculus one cut domain, family member 2 (Onecut2), mRNA Length = 1664 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 124 cggcggcggcagcggcgggg 143
>ref|NM_005811.2| Homo sapiens growth differentiation factor 11 (GDF11), mRNA Length = 1662 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 145 cggcggcggcagcggcgggg 164
>gb|AY745194.1| Gallus gallus cytoplasmic activation- proliferation-associated protein 1 mRNA, complete cds Length = 2109 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 72 cccggcggcggcagcggcgg 91
>gb|AY264920.1| Ovis aries homeo box C13 (Hoxc13) gene, exon 1 and partial cds Length = 1861 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 1211 cggcggcggcagcggcgggg 1230
>gb|AC106017.11| Homo sapiens chromosome 17, clone RP11-744A16, complete sequence Length = 178625 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctcttcctcctctgcgccct 20 |||||||||||||||||||| Sbjct: 138915 ctcttcctcctctgcgccct 138896
>gb|BC065352.1| Danio rerio makorin, ring finger protein, 2, mRNA (cDNA clone MGC:77393 IMAGE:6969527), complete cds Length = 2004 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 527 cccggcggcggcagcggcgg 508
>gb|AC008167.5| Homo sapiens BAC clone RP11-172O13 from 7, complete sequence Length = 142363 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 ctgcgccctgcctctgcctc 31 |||||||||||||||||||| Sbjct: 40433 ctgcgccctgcctctgcctc 40414
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ccggcggcggcagcggcggg 388 |||||||||||||||||||| Sbjct: 134944 ccggcggcggcagcggcggg 134963
>ref|XM_001001997.1| PREDICTED: Mus musculus hypothetical protein LOC668520 (LOC668520), mRNA Length = 792 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 377 cccggcggcggcagcggcgg 396
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gcggcggggcgccgcaggtg 400 |||||||||||||||||||| Sbjct: 1682970 gcggcggggcgccgcaggtg 1682989
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 gagcaggtggatgcgctgga 450 |||||||||||||||||||| Sbjct: 757802 gagcaggtggatgcgctgga 757821
>gb|BC085956.1| Rattus norvegicus zinc finger, AN1-type domain 3, mRNA (cDNA clone MGC:95308 IMAGE:7134959), complete cds Length = 2617 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 33 cggcggcggcagcggcgggg 14
>gb|AC106818.2| Homo sapiens chromosome 5 clone RP11-65F13, complete sequence Length = 180056 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 48649 cccggcggcggcagcggcgg 48668
>gb|AC121956.3| Mus musculus BAC clone RP24-225I19 from chromosome 7, complete sequence Length = 191330 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cctgcctctgcctctgctcc 37 |||||||||||||||||||| Sbjct: 99146 cctgcctctgcctctgctcc 99127
>gb|BC057305.1| Mus musculus splicing factor, arginine/serine-rich 14, mRNA (cDNA clone MGC:66544 IMAGE:6822887), complete cds Length = 4296 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 35 cggcggcggcagcggcgggg 54
>gb|AC125059.4| Mus musculus BAC clone RP23-404P13 from chromosome 19, complete sequence Length = 189613 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 tcttcctcctctgcgccctgcctc 25 ||||||||||||| |||||||||| Sbjct: 156205 tcttcctcctctgagccctgcctc 156228
>gb|AC117188.3| Mus musculus BAC clone RP23-42E3 from 1, complete sequence Length = 226443 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 154334 cccggcggcggcagcggcgg 154353
>gb|AC098886.4| Mus musculus BAC clone RP23-122M21 from 4, complete sequence Length = 219825 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 371 ggcggcggcagcggcggggcgccgcagg 398 ||||||||| ||||||||||| |||||| Sbjct: 113991 ggcggcggcggcggcggggcggcgcagg 113964
>gb|BC057390.1| Homo sapiens Ras-induced senescence 1, mRNA (cDNA clone MGC:57838 IMAGE:6175193), complete cds Length = 1798 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 1077 cggcggcggcagcggcgggg 1058
>ref|NM_001012175.1| Rattus norvegicus zinc finger, AN1-type domain 3 (Zfand3), mRNA Length = 2617 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 33 cggcggcggcagcggcgggg 14
>emb|CR956634.3| Pig DNA sequence from clone CH242-277I8 on chromosome 17, complete sequence Length = 206278 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ggcggcggcagcggcggggc 390 |||||||||||||||||||| Sbjct: 98539 ggcggcggcagcggcggggc 98520
>gb|AY242995.1| Mus musculus transcription factor ONECUT2 (Oc2) mRNA, complete cds Length = 1664 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 124 cggcggcggcagcggcgggg 143
>emb|CR550303.18| Mouse DNA sequence from clone RP24-87D8 on chromosome 4, complete sequence Length = 194565 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cgccctgcctctgcctctgc 34 |||||||||||||||||||| Sbjct: 165095 cgccctgcctctgcctctgc 165076 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cgccctgcctctgcctctgc 34 |||||||||||||||||||| Sbjct: 89910 cgccctgcctctgcctctgc 89891
>gb|BC018089.1| Homo sapiens hypothetical gene supported by AK124699, mRNA (cDNA clone IMAGE:4798404) Length = 992 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 24 cccggcggcggcagcggcgg 5
>emb|AL592063.10| Human DNA sequence from clone RP11-575F9 on chromosome 1, complete sequence Length = 160396 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cctgcctctgcctctgctcc 37 |||||||||||||||||||| Sbjct: 128652 cctgcctctgcctctgctcc 128671
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 ccccgagcaggtggatgcgc 446 |||||||||||||||||||| Sbjct: 1251351 ccccgagcaggtggatgcgc 1251370
>gb|AY341860.1| Oryza sativa (japonica cultivar-group) WRKY20 mRNA, complete cds Length = 1630 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gaggcggcgcgcggagggca 192 |||||||||||||||||||| Sbjct: 478 gaggcggcgcgcggagggca 459
>gb|AC092554.3| Papio anubis clone RP41-414G17, complete sequence Length = 167543 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 gcggcggcagcggcggggcg 391 |||||||||||||||||||| Sbjct: 33871 gcggcggcagcggcggggcg 33852
>gb|AC120049.5| Homo sapiens chromosome 18, clone RP11-456K23, complete sequence Length = 125488 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggaggcggcgcgcggagggc 191 |||||||||||||||||||| Sbjct: 84872 ggaggcggcgcgcggagggc 84853
>gb|AC163990.2| Mus musculus chromosome 5, clone RP24-166G8, complete sequence Length = 172641 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 gccctgcctctgcctctgct 35 |||||||||||||||||||| Sbjct: 111889 gccctgcctctgcctctgct 111908
>gb|AC158963.3| Mus musculus chromosome 1, clone RP23-321A12, complete sequence Length = 203604 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gccctgcctctgcctctgct 35 |||||||||||||||||||| Sbjct: 32011 gccctgcctctgcctctgct 31992
>emb|BX067985.1|CNS09OMD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC51DH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 851 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 848 cccggcggcggcagcggcgg 829
>emb|Z29371.1|OCMRADCYV O.cuniculus mRNA for adenylyl cyclase type V Length = 4995 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 cggcggcagcggcggggcgc 392 |||||||||||||||||||| Sbjct: 940 cggcggcagcggcggggcgc 959
>gb|AC124066.6| Homo sapiens chromosome 17, clone RP11-135L13, complete sequence Length = 160380 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctcttcctcctctgcgccct 20 |||||||||||||||||||| Sbjct: 147642 ctcttcctcctctgcgccct 147661
>emb|X78335.1|GGRARA21 Gallus gallus retinoic acid receptor alpha isoform 2-1 mRNA Length = 1494 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 gcgctacacccccgagcagg 437 |||||||||||||||||||| Sbjct: 813 gcgctacacccccgagcagg 832
>emb|X73972.1|GGRARA1 G.gallus RAR-alpha1 mRNA for retinoic acid receptor Length = 1552 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 gcgctacacccccgagcagg 437 |||||||||||||||||||| Sbjct: 882 gcgctacacccccgagcagg 901
>emb|X54628.1|MMOCT6GR M. musculus oct6 gene for the octamer binding factor oct6 Length = 1517 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 371 ggcggcggcagcggcggggcgccgcagg 398 ||||||||| ||||||||||| |||||| Sbjct: 15 ggcggcggcggcggcggggcggcgcagg 42
>gb|AC103796.3| Homo sapiens chromosome 11, clone RP11-1033A18, complete sequence Length = 211799 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 3881 cggcggcggcagcggcgggg 3900
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 cgcccggcggcggcagcggc 385 |||||||||||||||||||| Sbjct: 804046 cgcccggcggcggcagcggc 804065
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ggcggcagcggcggggcgcc 393 |||||||||||||||||||| Sbjct: 314700 ggcggcagcggcggggcgcc 314681
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ggcggcagcggcggggcgcc 393 |||||||||||||||||||| Sbjct: 258590 ggcggcagcggcggggcgcc 258571
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 ggcggcagcggcggggcgcc 393 |||||||||||||||||||| Sbjct: 114338 ggcggcagcggcggggcgcc 114319
>emb|AJ251217.1|PSP251217 Pseudomonas sp. B4 gene encoding putative transposase, ORF0 and ORF1 DNA, bphA1, bphA2, bphA3 and bphA4 genes Length = 6012 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 ccccgagcaggtggatgcgc 446 |||||||||||||||||||| Sbjct: 4888 ccccgagcaggtggatgcgc 4869
>emb|AJ720561.1| Gallus gallus mRNA for hypothetical protein, clone 20e8 Length = 2247 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gcccggcggcggcagcggcg 386 |||||||||||||||||||| Sbjct: 264 gcccggcggcggcagcggcg 283
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 cgcggcggcgaccctggccctggc 219 ||||||| |||||||||||||||| Sbjct: 2536868 cgcggcgtcgaccctggccctggc 2536845
>gb|AC090668.7| Homo sapiens 12 BAC RP11-791O13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111375 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 ctggccctggctcatcctct 228 |||||||||||||||||||| Sbjct: 107174 ctggccctggctcatcctct 107155
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 cggcggcagcggcggggcgc 392 |||||||||||||||||||| Sbjct: 270122 cggcggcagcggcggggcgc 270141
>gb|DQ385515.1| Phaeoceros carolinianus class III homeodomain-leucine zipper protein C3HDZ1 (C3HDZ1) mRNA, complete cds Length = 2586 Score = 40.1 bits (20), Expect = 6.2 Identities = 44/52 (84%) Strand = Plus / Plus Query: 410 aagtacgtgcgctacacccccgagcaggtggatgcgctggagcgcgtctaca 461 ||||| ||||| |||||| ||||||||||| || |||||||| ||||||| Sbjct: 55 aagtatgtgcgttacaccaatgagcaggtggaggctctggagcgtgtctaca 106
>gb|AE006022.1| Caulobacter crescentus CB15 section 348 of 359 of the complete genome Length = 10637 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 gcggcgaccctggccctggc 219 |||||||||||||||||||| Sbjct: 5383 gcggcgaccctggccctggc 5364
>dbj|AK095719.1| Homo sapiens cDNA FLJ38400 fis, clone FEBRA2008159 Length = 2869 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 25 cccggcggcggcagcggcgg 6
>emb|CR611917.1| full-length cDNA clone CS0DI082YG05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1147 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 112 cggcggcggcagcggcgggg 131
>gb|AC107988.4| Homo sapiens chromosome 18, clone CTC-346I21, complete sequence Length = 116247 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ggaggcggcgcgcggagggc 191 |||||||||||||||||||| Sbjct: 4714 ggaggcggcgcgcggagggc 4733
>tpg|BK005060.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription factor 57 (WRKY57) gene, complete cds Length = 3018 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gaggcggcgcgcggagggca 192 |||||||||||||||||||| Sbjct: 429 gaggcggcgcgcggagggca 410
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tccacgggaggcggcgcgcg 185 |||||||||||||||||||| Sbjct: 951617 tccacgggaggcggcgcgcg 951636
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete sequence Length = 187707 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 gcggcggcagcggcggggcgccgc 395 ||||||||||||| |||||||||| Sbjct: 6228 gcggcggcagcgggggggcgccgc 6251
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 63008 cggcggcggcagcggcgggg 62989
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete sequence Length = 147117 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 63277 cggcggcggcagcggcgggg 63258
>dbj|AB094101.1| Betula maximowicziana DNA, microsatellite Bmax630 Length = 232 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 196 cggcggcggcagcggcgggg 215
>dbj|AB219072.1| Pinus taeda PtPCL1 mRNA, partial cds Length = 363 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ctgcctctgcctctgctcca 38 |||||||||||||||||||| Sbjct: 155 ctgcctctgcctctgctcca 174
>gb|AC092749.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0023M11, from chromosome 10, complete sequence Length = 138668 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 59780 cggcggcggcagcggcgggg 59761
>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 372 gcggcggcagcggcggggcgccgc 395 ||||||||||||| |||||||||| Sbjct: 6637 gcggcggcagcgggggggcgccgc 6614
>gb|AY660573.1| Oryza sativa (japonica cultivar-group) cultivar TP309 putative D type cyclin gene, partial cds Length = 1036 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 623 cggcggcggcagcggcgggg 642
>dbj|AK148316.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370087H04 product:testis expressed gene 27, full insert sequence Length = 3450 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 79 cggcggcggcagcggcgggg 60
>dbj|AK147659.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1102K16 product:B-cell CLL/lymphoma 9, full insert sequence Length = 6103 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 34 cccggcggcggcagcggcgg 15
>ref|XM_942917.1| PREDICTED: Homo sapiens hypothetical protein LOC647650 (LOC647650), mRNA Length = 1053 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 507 cccggcggcggcagcggcgg 488
>ref|XM_932488.1| PREDICTED: Homo sapiens hypothetical protein LOC644880 (LOC644880), mRNA Length = 1242 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 696 cccggcggcggcagcggcgg 677
>gb|AC092048.2| Homo sapiens chromosome 3 clone RP11-241P3, complete sequence Length = 155663 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gccctgcctctgcctctgct 35 |||||||||||||||||||| Sbjct: 35440 gccctgcctctgcctctgct 35421
>gb|AC151294.3| Mus musculus BAC clone RP23-137I7 from chromosome 17, complete sequence Length = 206868 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 199661 cggcggcggcagcggcgggg 199642
>gb|AC154590.2| Mus musculus BAC clone RP23-368L2 from chromosome 14, complete sequence Length = 168428 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ctgcctctgcctctgctcca 38 |||||||||||||||||||| Sbjct: 122269 ctgcctctgcctctgctcca 122288
>gb|AC021766.6| Homo sapiens, clone RP11-9H20, complete sequence Length = 151558 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ggaggcggcgcgcggagggc 191 |||||||||||||||||||| Sbjct: 33781 ggaggcggcgcgcggagggc 33762
>emb|BX950196.7| Mouse DNA sequence from clone RP23-287E8 on chromosome 4, complete sequence Length = 170778 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cgccctgcctctgcctctgc 34 |||||||||||||||||||| Sbjct: 93542 cgccctgcctctgcctctgc 93561 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cgccctgcctctgcctctgc 34 |||||||||||||||||||| Sbjct: 13489 cgccctgcctctgcctctgc 13508
>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete sequence Length = 130359 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 369 ccggcggcggcagcggcggggcgc 392 ||||||||||| |||||||||||| Sbjct: 114997 ccggcggcggcggcggcggggcgc 115020
>dbj|AK077951.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030458K23 product:similar to CHOLINE TRANSPORTER-LIKE PROTEIN 1, SPLICE VARIANT A [Rattus norvegicus], full insert sequence Length = 1941 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 80 cccggcggcggcagcggcgg 61
>dbj|AK077950.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030458J16 product:unclassifiable, full insert sequence Length = 2179 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 68 cccggcggcggcagcggcgg 49
>dbj|AK042293.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630079E18 product:hypothetical D111/G-patch domain/Aminoacyl-transfer RNA synthetases class-I/Glutamic acid-rich region/SWAP / SURP containing protein, full insert sequence Length = 3684 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 383 cggcggcggcagcggcgggg 402
>gb|AY027651.1| Pseudomonas sp. Cam-1 bph operon, complete cds Length = 6137 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 ccccgagcaggtggatgcgc 446 |||||||||||||||||||| Sbjct: 3021 ccccgagcaggtggatgcgc 3002
>dbj|AK090169.1| Mus musculus 13 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:G630010A09 product:Rab3 interacting protein 1, full insert sequence Length = 1558 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 165 cccggcggcggcagcggcgg 146
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ccggcggcggcagcggcggg 388 |||||||||||||||||||| Sbjct: 669012 ccggcggcggcagcggcggg 668993
>gb|AC156393.12| Mus musculus 10 BAC RP24-315E6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 164936 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cctgcctctgcctctgctcc 37 |||||||||||||||||||| Sbjct: 69392 cctgcctctgcctctgctcc 69373
>gb|AC158639.8| Mus musculus 10 BAC RP24-73H17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 199191 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cctgcctctgcctctgctcc 37 |||||||||||||||||||| Sbjct: 136577 cctgcctctgcctctgctcc 136596
>gb|AF100907.1|AF100907 Homo sapiens bone morphogenetic protein 11 (BMP11) mRNA, complete cds Length = 1443 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 145 cggcggcggcagcggcgggg 164
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gaggcggcgcgcggagggca 192 |||||||||||||||||||| Sbjct: 106722 gaggcggcgcgcggagggca 106741
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 23641050 cggcggcggcagcggcgggg 23641069
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 11341760 cccggcggcggcagcggcgg 11341779 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 5880256 cggcggcggcagcggcgggg 5880275 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ccggcggcggcagcggcggg 388 |||||||||||||||||||| Sbjct: 5029520 ccggcggcggcagcggcggg 5029501
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ccggcggcggcagcggcggg 388 |||||||||||||||||||| Sbjct: 21778387 ccggcggcggcagcggcggg 21778406 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 cccggcggcggcagcggcggggcg 391 |||||||||||| ||||||||||| Sbjct: 18798102 cccggcggcggcggcggcggggcg 18798125
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete sequence Length = 116443 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ccggcggcggcagcggcggg 388 |||||||||||||||||||| Sbjct: 112271 ccggcggcggcagcggcggg 112252
>gb|AC012671.7| Homo sapiens BAC clone RP11-554H10 from 2, complete sequence Length = 198694 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gaccctggccctggctcatcctct 228 ||||||||| |||||||||||||| Sbjct: 4161 gaccctggctctggctcatcctct 4184
>gb|AC104081.2| Homo sapiens BAC clone RP11-559A1 from 2, complete sequence Length = 142118 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gaccctggccctggctcatcctct 228 ||||||||| |||||||||||||| Sbjct: 66896 gaccctggctctggctcatcctct 66919
>gb|AC155722.9| Mus musculus 6 BAC RP24-204J8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198481 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 181429 cccggcggcggcagcggcgg 181410
>gb|M86348.1|PSEBPHA Pseudomonas sp. LB400 biphenyl dioxygenase (bphA), biphenyl dioxygenase (bphE), biphenyl dioxygenase (bphF) and biphenyl dioxygenase (bphG)s, complete cds, and dihydrodiol dehydrogenase (bphB), partial cds Length = 5700 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 ccccgagcaggtggatgcgc 446 |||||||||||||||||||| Sbjct: 4462 ccccgagcaggtggatgcgc 4443
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 12701 cggcggcggcagcggcgggg 12682
>gb|AC073487.34| Homo sapiens 12 BAC RP11-762I7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 54666 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 8234 cggcggcggcagcggcgggg 8253
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 8802 cggcggcggcagcggcgggg 8821
>ref|NM_204536.1| Gallus gallus retinoic acid receptor alpha 1 isoform (RAR-ALPHA1), mRNA Length = 1552 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 gcgctacacccccgagcagg 437 |||||||||||||||||||| Sbjct: 882 gcgctacacccccgagcagg 901
>gb|AF518875.1| Mus musculus arginine/serine-rich 14 splicing factor (Sfrs14) mRNA, complete cds Length = 3891 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 375 cggcggcggcagcggcgggg 394
>gb|AY956872.1| Thauera selenatis strain AX putative benzoyl-CoA reductase (bcrC) gene, partial cds Length = 929 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 cgggcaagtacgtgcgctac 424 |||||||||||||||||||| Sbjct: 346 cgggcaagtacgtgcgctac 365
>gb|AY956870.1| Thauera chlorobenzoica strain 4FB2 putative benzoyl-CoA reductase (bcrC) gene, partial cds Length = 929 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 cgggcaagtacgtgcgctac 424 |||||||||||||||||||| Sbjct: 346 cgggcaagtacgtgcgctac 365
>gb|AY956869.1| Thauera chlorobenzoica strain 4FB1 putative benzoyl-CoA reductase (bcrC) gene, partial cds Length = 929 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 cgggcaagtacgtgcgctac 424 |||||||||||||||||||| Sbjct: 346 cgggcaagtacgtgcgctac 365
>gb|AY956866.1| Thauera chlorobenzoica strain 3CB1 putative benzoyl-CoA reductase (bcrC) gene, partial cds Length = 929 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 cgggcaagtacgtgcgctac 424 |||||||||||||||||||| Sbjct: 346 cgggcaagtacgtgcgctac 365
>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699D11 Length = 140825 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 61355 cccggcggcggcagcggcgg 61336
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 48646 cggcggcggcagcggcgggg 48665
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 361 gtcgtcgcccggcggcggcagcgg 384 ||||||| |||||||||||||||| Sbjct: 1358783 gtcgtcgaccggcggcggcagcgg 1358806
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 29469 cccggcggcggcagcggcgg 29488
>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1155_H10 Length = 140475 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 369 ccggcggcggcagcggcggggcgc 392 ||||||||||| |||||||||||| Sbjct: 100359 ccggcggcggcggcggcggggcgc 100336
>gb|AC102106.14| Mus musculus chromosome 18, clone RP23-92B24, complete sequence Length = 230823 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 136573 cggcggcggcagcggcgggg 136554
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ccggcggcggcagcggcggg 388 |||||||||||||||||||| Sbjct: 71634 ccggcggcggcagcggcggg 71615
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 1908 cggcggcggcagcggcgggg 1927
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 81031 cggcggcggcagcggcgggg 81050
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 369 ccggcggcggcagcggcggggcgc 392 ||||||||||| |||||||||||| Sbjct: 89634 ccggcggcggcggcggcggggcgc 89611
>emb|BX470151.16| Mouse DNA sequence from clone RP23-354H23 on chromosome 4, complete sequence Length = 59157 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cgccctgcctctgcctctgc 34 |||||||||||||||||||| Sbjct: 31932 cgccctgcctctgcctctgc 31913
>emb|BX001066.14| Mouse DNA sequence from clone RP23-463P1 on chromosome 4, complete sequence Length = 195216 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cgccctgcctctgcctctgc 34 |||||||||||||||||||| Sbjct: 60548 cgccctgcctctgcctctgc 60529
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 124597 cggcggcggcagcggcgggg 124578
>dbj|BS000240.1| Pan troglodytes chromosome 22 clone:RP43-055A16, map 22, complete sequences Length = 185079 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 199 ggcggcgaccctggccctggctca 222 ||||||||| |||||||||||||| Sbjct: 106663 ggcggcgactctggccctggctca 106640
>dbj|BS000230.1| Pan troglodytes chromosome 22 clone:PTB-105H12, map 22, complete sequences Length = 242704 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 tcctctgcgccctgcctctgcctc 31 |||||||||||| ||||||||||| Sbjct: 147227 tcctctgcgcccagcctctgcctc 147250
>dbj|AK120376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071J20, full insert sequence Length = 975 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gaggcggcgcgcggagggca 192 |||||||||||||||||||| Sbjct: 489 gaggcggcgcgcggagggca 470
>dbj|AK111249.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-D10, full insert sequence Length = 871 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 369 ccggcggcggcagcggcggggcgc 392 ||||||||||| |||||||||||| Sbjct: 245 ccggcggcggcggcggcggggcgc 268
>dbj|AK109814.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-H05, full insert sequence Length = 1631 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ccggcggcggcagcggcggg 388 |||||||||||||||||||| Sbjct: 1111 ccggcggcggcagcggcggg 1092
>dbj|AK106301.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-C05, full insert sequence Length = 2284 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 157 cggcggcggcagcggcgggg 138
>gb|AF028333.1|AF028333 Homo sapiens growth/differentiation factor-11 (GDF11) mRNA, partial cds Length = 1258 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 25 cggcggcggcagcggcgggg 44
>dbj|AK072209.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013165I05, full insert sequence Length = 1502 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 372 gcggcggcagcggcggggcgccgc 395 ||||||||||||| |||||||||| Sbjct: 315 gcggcggcagcgggggggcgccgc 292
>dbj|AK071363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092F04, full insert sequence Length = 2303 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 ccggcggcggcagcggcggg 388 |||||||||||||||||||| Sbjct: 617 ccggcggcggcagcggcggg 598
>dbj|AK070025.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039C11, full insert sequence Length = 1880 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 285 cggcggcggcagcggcgggg 304
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ggtggatgcgctggagcgcg 455 |||||||||||||||||||| Sbjct: 2931687 ggtggatgcgctggagcgcg 2931668 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ggtggatgcgctggagcgcg 455 |||||||||||||||||||| Sbjct: 569176 ggtggatgcgctggagcgcg 569157
>dbj|AK066061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050C22, full insert sequence Length = 2297 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 159 cggcggcggcagcggcgggg 140
>dbj|AK065289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M23, full insert sequence Length = 2774 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 55 cggcggcggcagcggcgggg 36
>gb|AC140071.4| Mus musculus BAC clone RP23-394K8 from 3, complete sequence Length = 203896 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 74643 cccggcggcggcagcggcgg 74624
>dbj|AK061799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H08, full insert sequence Length = 950 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gaggcggcgcgcggagggca 192 |||||||||||||||||||| Sbjct: 451 gaggcggcgcgcggagggca 432
>emb|AL359207.7| Human DNA sequence from clone RP11-533N14 on chromosome 1 Contains the 3' end of the BCL9 gene for B-cell CLL/lymphoma 9 protein and a gene for lysophosphatidic acid phosphatase ACP6 protein, complete sequence Length = 112707 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 29323 cccggcggcggcagcggcgg 29304
>dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, section 91/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 tcctctgcgccctgcctctgcctc 31 |||||||||||| ||||||||||| Sbjct: 332267 tcctctgcgcccagcctctgcctc 332290
>gb|AC131084.13| Mus musculus chromosome 1, clone RP23-450D2, complete sequence Length = 208140 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gccctgcctctgcctctgct 35 |||||||||||||||||||| Sbjct: 72813 gccctgcctctgcctctgct 72794
>emb|CT571246.8| Mouse DNA sequence from clone RP23-445P15 on chromosome 4, complete sequence Length = 121701 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cgccctgcctctgcctctgc 34 |||||||||||||||||||| Sbjct: 74809 cgccctgcctctgcctctgc 74790
>gb|BC083124.1| Mus musculus zinc finger, AN1-type domain 3, mRNA (cDNA clone MGC:103362 IMAGE:6334368), complete cds Length = 2664 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 75 cggcggcggcagcggcgggg 56
>ref|NM_148926.2| Mus musculus zinc finger, AN1-type domain 3 (Zfand3), mRNA Length = 2664 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cggcggcggcagcggcgggg 389 |||||||||||||||||||| Sbjct: 75 cggcggcggcagcggcgggg 56
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 1115225 cccggcggcggcagcggcgg 1115206
>gb|AC153592.3| Mus musculus 6 BAC RP23-20C15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195726 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cccggcggcggcagcggcgg 387 |||||||||||||||||||| Sbjct: 177935 cccggcggcggcagcggcgg 177954 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,976,906 Number of Sequences: 3902068 Number of extensions: 2976906 Number of successful extensions: 336219 Number of sequences better than 10.0: 273 Number of HSP's better than 10.0 without gapping: 292 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 330923 Number of HSP's gapped (non-prelim): 5296 length of query: 462 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 440 effective length of database: 17,147,199,772 effective search space: 7544767899680 effective search space used: 7544767899680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
