Clone Information

BLAST Search Result

Clone Name	bastl56c07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SAPS2_MOUSE (Q8R3Q2) SAPS domain family member 2	93	3e-19
2	SAPS2_HUMAN (O75170) SAPS domain family member 2	91	1e-18
3	SAPS3_CHICK (Q5F471) SAPS domain family member 3	91	2e-18
4	SAPS3_MOUSE (Q922D4) SAPS domain family member 3	89	5e-18
5	SAPS3_HUMAN (Q5H9R7) SAPS domain family member 3 (Sporulation-in...	89	5e-18
6	SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1	86	4e-17
7	SAP3B_XENLA (Q6NRF1) SAPS domain family member 3-B	86	4e-17
8	SAP3A_XENLA (Q6NRI0) SAPS domain family member 3-A	86	5e-17
9	SAPS1_MOUSE (Q7TSI3) SAPS domain family member 1	85	9e-17
10	EKC1_SCHPO (O74511) Extragenic suppressor of kinetochore protein 1	55	7e-08
11	IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2	34	0.23
12	SGOL2_HUMAN (Q562F6) Shugoshin-like 2 (Tripin)	33	0.40
13	SA190_YEAST (P36123) SIT4-associating protein SAP190	33	0.52
14	SIN3B_HUMAN (O75182) Paired amphipathic helix protein Sin3b (Tra...	32	0.88
15	SPB1_ASPFU (Q4WVH3) AdoMet-dependent rRNA methyltransferase spb1...	32	0.88
16	ETV2_MOUSE (P41163) ETS translocation variant 2 (Ets-related pro...	32	1.2
17	SOX12_HUMAN (O15370) SOX-12 protein (SOX-22 protein)	31	1.5
18	YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4	31	1.5
19	SIN3B_MOUSE (Q62141) Paired amphipathic helix protein Sin3b (Tra...	31	1.5
20	VGLB_BHV1C (P12640) Glycoprotein I precursor (Glycoprotein GVP-6...	31	2.0
21	SCRT1_MOUSE (Q99M85) Transcriptional repressor scratch 1 (Scratc...	31	2.0
22	SCRT1_HUMAN (Q9BWW7) Transcriptional repressor scratch 1 (Scratc...	31	2.0
23	Y928_TREPA (O83898) Hypothetical protein TP0928	31	2.0
24	VGLB_BHV1P (P17471) Glycoprotein I precursor (Glycoprotein GVP-6...	31	2.0
25	HTPX_RHILO (Q98ET0) Probable protease htpX homolog (EC 3.4.24.-)	30	2.6
26	FBRL_GIALA (Q24957) Fibrillarin	30	2.6
27	SHAN3_HUMAN (Q9BYB0) SH3 and multiple ankyrin repeat domains pro...	30	2.6
28	IF2_THEFY (Q47RV1) Translation initiation factor IF-2	30	3.3
29	CCA_AERPE (Q9YB04) CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21)...	30	3.3
30	MYOB_DICDI (P34092) Myosin IB heavy chain	30	3.3
31	PIAS4_MOUSE (Q9JM05) Protein inhibitor of activated STAT protein...	30	3.3
32	ROCK2_HUMAN (O75116) Rho-associated protein kinase 2 (EC 2.7.11....	30	4.4
33	ROCK2_BOVIN (Q28021) Rho-associated protein kinase 2 (EC 2.7.11....	30	4.4
34	ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arab...	30	4.4
35	ZN297_HUMAN (O15209) Zinc finger protein 297 (BING1 protein) (Zi...	29	5.7
36	CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long...	29	5.7
37	US02_EHV1B (P28964) Gene 68 protein	29	7.5
38	CI066_HUMAN (Q5T8R8) Protein C9orf66	29	7.5
39	CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor	29	7.5
40	SOX12_MOUSE (Q04890) SOX-12 protein	29	7.5
41	RP54_XANCV (P77998) RNA polymerase sigma-54 factor	29	7.5
42	TOP3B_MOUSE (Q9Z321) DNA topoisomerase 3-beta-1 (EC 5.99.1.2) (D...	29	7.5
43	ZN297_MOUSE (Q9Z0G7) Zinc finger protein 297 (BING1 protein)	29	7.5
44	MCHR1_MACMU (Q8MJ89) Melanin-concentrating hormone receptor 1 (M...	28	9.7
45	TOP3A_DROME (Q9NG98) DNA topoisomerase 3-alpha (EC 5.99.1.2) (DN...	28	9.7
46	UL34_EBV (P03185) Protein BFRF1	28	9.7
47	APS1_SCHPO (Q09790) Diphosphoinositol polyphosphate phosphohydro...	28	9.7
48	MYSC_ACACA (P10569) Myosin IC heavy chain	28	9.7

>SAPS2_MOUSE (Q8R3Q2) SAPS domain family member 2|
          Length = 923

 Score = 93.2 bits (230), Expect = 3e-19
 Identities = 42/93 (45%), Positives = 66/93 (70%)
 Frame = +2

Query: 188 MFWRMTGLSAASPVDTILDKENFTLEELLDEDEVIQECKALNTRLINFLRDKAQVEQLLR 367
           MFW+   L+  S VD +LDKE+ TL+EL+DED+++QECKA N +L++FL  +  +E+L+ 
Sbjct: 1   MFWKFD-LNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVN 59

Query: 368 YVVEEVPDDAEKKRSFKFPFIACEIFTCEIDVI 466
            + ++ P D E+K  FK+P  ACE+ TC++  I
Sbjct: 60  LITQDPPQDMEEKVRFKYPNTACELLTCDVPQI 92

to top

>SAPS2_HUMAN (O75170) SAPS domain family member 2|
          Length = 927

 Score = 91.3 bits (225), Expect = 1e-18
 Identities = 42/93 (45%), Positives = 66/93 (70%)
 Frame = +2

Query: 188 MFWRMTGLSAASPVDTILDKENFTLEELLDEDEVIQECKALNTRLINFLRDKAQVEQLLR 367
           MFW+   L+  S VD +LDKE+ TL+EL+DED+++QECKA N +L++FL  +  +E+L+ 
Sbjct: 1   MFWKFD-LNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVS 59

Query: 368 YVVEEVPDDAEKKRSFKFPFIACEIFTCEIDVI 466
            + ++ P D E+K  FK+P  ACE+ TC++  I
Sbjct: 60  LITQDPPLDMEEKVRFKYPNTACELLTCDVPQI 92

to top

>SAPS3_CHICK (Q5F471) SAPS domain family member 3|
          Length = 873

 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 40/93 (43%), Positives = 67/93 (72%)
 Frame = +2

Query: 188 MFWRMTGLSAASPVDTILDKENFTLEELLDEDEVIQECKALNTRLINFLRDKAQVEQLLR 367
           MFW+   L ++S +DT+L++E+ TL+EL+DE++V+QECKA N +LI FL     +E L+ 
Sbjct: 1   MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKSECLEDLVS 59

Query: 368 YVVEEVPDDAEKKRSFKFPFIACEIFTCEIDVI 466
           +++EE P D ++K  +K+P I+CE+ T ++  I
Sbjct: 60  FIIEEPPQDMDEKIRYKYPNISCELLTSDVSQI 92

to top

>SAPS3_MOUSE (Q922D4) SAPS domain family member 3|
          Length = 844

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 39/90 (43%), Positives = 66/90 (73%)
 Frame = +2

Query: 188 MFWRMTGLSAASPVDTILDKENFTLEELLDEDEVIQECKALNTRLINFLRDKAQVEQLLR 367
           MFW+   L ++S +DT+L++E+ TL+EL+DE++V+QECKA N +LI FL     +E L+ 
Sbjct: 1   MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKAECLEDLVS 59

Query: 368 YVVEEVPDDAEKKRSFKFPFIACEIFTCEI 457
           +++EE P D ++K  +K+P I+CE+ T ++
Sbjct: 60  FIIEEPPQDMDEKIRYKYPNISCELLTSDV 89

to top

>SAPS3_HUMAN (Q5H9R7) SAPS domain family member 3 (Sporulation-induced|
           transcript 4-associated protein SAPL) (Protein
           phosphatase 6 regulatory subunit 3)
          Length = 873

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 39/90 (43%), Positives = 66/90 (73%)
 Frame = +2

Query: 188 MFWRMTGLSAASPVDTILDKENFTLEELLDEDEVIQECKALNTRLINFLRDKAQVEQLLR 367
           MFW+   L ++S +DT+L++E+ TL+EL+DE++V+QECKA N +LI FL     +E L+ 
Sbjct: 1   MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKAECLEDLVS 59

Query: 368 YVVEEVPDDAEKKRSFKFPFIACEIFTCEI 457
           +++EE P D ++K  +K+P I+CE+ T ++
Sbjct: 60  FIIEEPPQDMDEKIRYKYPNISCELLTSDV 89

to top

>SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1|
          Length = 881

 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 37/93 (39%), Positives = 65/93 (69%)
 Frame = +2

Query: 188 MFWRMTGLSAASPVDTILDKENFTLEELLDEDEVIQECKALNTRLINFLRDKAQVEQLLR 367
           MFW+   L  +S +DT+L++E+ +L ELLDE++V+QECK +N +L++FL     ++ ++ 
Sbjct: 1   MFWKFD-LHTSSHLDTLLEREDLSLPELLDEEDVLQECKVVNRKLLDFLLQPPHLQAMVA 59

Query: 368 YVVEEVPDDAEKKRSFKFPFIACEIFTCEIDVI 466
           +V +E PD  E++  +K+P +ACEI T ++  I
Sbjct: 60  WVTQEPPDSGEERLRYKYPSVACEILTSDVPQI 92

to top

>SAP3B_XENLA (Q6NRF1) SAPS domain family member 3-B|
          Length = 850

 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 36/93 (38%), Positives = 65/93 (69%)
 Frame = +2

Query: 188 MFWRMTGLSAASPVDTILDKENFTLEELLDEDEVIQECKALNTRLINFLRDKAQVEQLLR 367
           MFW+   L ++S +DT+L+++  TL+EL+DE++++QECKA N +L+ FL     +E L+ 
Sbjct: 1   MFWKFD-LHSSSHIDTLLERDEVTLKELMDEEDILQECKAQNRKLVEFLLKSECLEDLVT 59

Query: 368 YVVEEVPDDAEKKRSFKFPFIACEIFTCEIDVI 466
           ++ EE P D ++K  +K+P ++CE+ T ++  I
Sbjct: 60  FITEEPPQDMDEKIRYKYPNLSCELLTSDVSQI 92

to top

>SAP3A_XENLA (Q6NRI0) SAPS domain family member 3-A|
          Length = 852

 Score = 85.9 bits (211), Expect = 5e-17
 Identities = 36/93 (38%), Positives = 65/93 (69%)
 Frame = +2

Query: 188 MFWRMTGLSAASPVDTILDKENFTLEELLDEDEVIQECKALNTRLINFLRDKAQVEQLLR 367
           MFW+   L ++S +DT+L+++  TL+EL+DE++++QECKA N +L+ FL     +E L+ 
Sbjct: 1   MFWKFD-LHSSSHIDTLLERDEVTLKELMDEEDILQECKAQNRKLVEFLLKAECLEDLVT 59

Query: 368 YVVEEVPDDAEKKRSFKFPFIACEIFTCEIDVI 466
           ++ EE P D ++K  +K+P ++CE+ T ++  I
Sbjct: 60  FITEEPPQDMDEKIRYKYPNLSCELLTSDVSQI 92

to top

>SAPS1_MOUSE (Q7TSI3) SAPS domain family member 1|
          Length = 856

 Score = 85.1 bits (209), Expect = 9e-17
 Identities = 37/93 (39%), Positives = 65/93 (69%)
 Frame = +2

Query: 188 MFWRMTGLSAASPVDTILDKENFTLEELLDEDEVIQECKALNTRLINFLRDKAQVEQLLR 367
           MFW+   L  +S +DT+L+KE+ +L ELLDE++V+QECK +N +L++FL   + ++ ++ 
Sbjct: 1   MFWKFD-LHTSSHLDTLLEKEDLSLPELLDEEDVLQECKVVNRKLLDFLLQPSHLQAMVA 59

Query: 368 YVVEEVPDDAEKKRSFKFPFIACEIFTCEIDVI 466
           +V +E P   E++  +K+P +ACEI T ++  I
Sbjct: 60  WVTQEPPASGEERLRYKYPSVACEILTSDVPQI 92

to top

>EKC1_SCHPO (O74511) Extragenic suppressor of kinetochore protein 1|
          Length = 838

 Score = 55.5 bits (132), Expect = 7e-08
 Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 12/102 (11%)
 Frame = +2

Query: 188 MFWRMT---GLSAASPVDTILDK--ENFTLEELLDEDEVIQECKALNTRLINFLRDKAQV 352
           MFWR+    G  ++S ++ ILDK  +   L+ELL+E+ V+ ECK+ N +L+ +L     +
Sbjct: 1   MFWRLGQGFGFQSSSAIEAILDKPEDEINLKELLEENGVLDECKSHNPKLLEYLCKPEVL 60

Query: 353 EQLLRYVVE----EVPD---DAEKKRSFKFPFIACEIFTCEI 457
            QL+ Y++E    E+P      E+    +  +IA EI + ++
Sbjct: 61  SQLIDYILEVDETEIPSADGGYEEPEHTRLSYIASEILSSDV 102

to top

>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 26/73 (35%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
 Frame = -3

Query: 225 GEAAERPVMRQNMVAAAVDLG------FPAPGGASPRPNPRESGRRRPDWATGEGGWIGR 64
           G+ A RP        AA   G       P+PG   PRPNP    +R P      GG  GR
Sbjct: 217 GQGAPRPGATPGPRPAAAQGGPRPGGPRPSPGSMPPRPNPGAMPQRTPRPGPSAGGRPGR 276

Query: 63  --GASGSNWDRGG 31
             GA G+    GG
Sbjct: 277 PGGAPGAGRPGGG 289

to top

>SGOL2_HUMAN (Q562F6) Shugoshin-like 2 (Tripin)|
          Length = 1265

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 18/69 (26%), Positives = 29/69 (42%)
 Frame = +2

Query: 116 DSRGFGRGLAPPGAGNPRSTAAATMFWRMTGLSAASPVDTILDKENFTLEELLDEDEVIQ 295
           +++  GR    P   N          W    LSA +P  T+LDK++ +  EL   +E+  
Sbjct: 254 NAQSIGRRWEKPSPSNVTERKKRGSSWESNNLSADTPCATVLDKQHISSPELNCNNEING 313

Query: 296 ECKALNTRL 322
                NT +
Sbjct: 314 HTNETNTEM 322

to top

>SA190_YEAST (P36123) SIT4-associating protein SAP190|
          Length = 1033

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +2

Query: 260 LEELLDEDEVIQECKALNTRLINFLRDKAQVEQLLRYVVEEVPDDAE 400
           L++LLD+DE+  E    N +L+ FL+    + +L+ YV  E   D E
Sbjct: 94  LDDLLDDDELYTELMCSNFKLLIFLKYPDVLSKLIEYVTNEKILDEE 140

to top

>SIN3B_HUMAN (O75182) Paired amphipathic helix protein Sin3b (Transcriptional|
          corepressor Sin3b) (Histone deacetylase complex subunit
          Sin3b)
          Length = 1162

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 90 TGEGGWIGRGASGSNWDRGG*EAHER 13
          +G GG  GRG SG+ W R G   HE+
Sbjct: 11 SGAGGPAGRGLSGARWGRSGSAGHEK 36

to top

>SPB1_ASPFU (Q4WVH3) AdoMet-dependent rRNA methyltransferase spb1 (EC 2.1.1.-)|
           (2'-O-ribose RNA methyltransferase)
           (S-adenosyl-L-methionine-dependent methyltransferase)
          Length = 795

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 25/88 (28%), Positives = 40/88 (45%)
 Frame = +2

Query: 143 APPGAGNPRSTAAATMFWRMTGLSAASPVDTILDKENFTLEELLDEDEVIQECKALNTRL 322
           APP +G   S AA  MF+          VD + D+++    E+ ++D+  ++  AL  + 
Sbjct: 524 APPNSGTLSSKAA--MFFDQDIFQGLGDVDDVEDEDSAI--EMQEDDKSAKKGSALEKKA 579

Query: 323 INFLRDKAQVEQLLRYVVEEVPDDAEKK 406
               + KAQ  +       E PDD  KK
Sbjct: 580 PKEAKKKAQAPEDFSDSDPEEPDDPRKK 607

to top

>ETV2_MOUSE (P41163) ETS translocation variant 2 (Ets-related protein 71)|
          Length = 335

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 18/69 (26%)
 Frame = -3

Query: 159 PAPGGASPRP----------NPRESGRRRPDWATGEGGW------IGRGASGSN-WDRG- 34
           PAP G SP P          NP  S    P W+     W         G SG+  WD G 
Sbjct: 105 PAPPGTSPSPFVGFEGATGQNPATSAGGVPSWSHPPAAWSTTSWDCSVGPSGATYWDNGL 164

Query: 33  G*EAHERRK 7
           G EAHE  K
Sbjct: 165 GGEAHEDYK 173

to top

>SOX12_HUMAN (O15370) SOX-12 protein (SOX-22 protein)|
          Length = 315

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = -3

Query: 204 VMRQNMVAAAVDLGFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASG-SNWDRGG* 28
           +++Q    A  D G P PG     P P E G R P W     G I R  +    W +   
Sbjct: 1   MVQQRGARAKRDGGPPPPG-----PGPAEEGAREPGWCKTPSGHIKRPMNAFMVWSQ--- 52

Query: 27  EAHERRK 7
             HERRK
Sbjct: 53  --HERRK 57

to top

>YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4|
          Length = 376

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -3

Query: 225 GEAAERPVMRQNMVAAAVDLGFPAPGGASPRPNPRESG 112
           G +A  P    N ++ +   G PAPG ++  PNP  +G
Sbjct: 31  GSSAPAPSTSPNSISPSNPTGTPAPGASAQTPNPNAAG 68

to top

>SIN3B_MOUSE (Q62141) Paired amphipathic helix protein Sin3b (Transcriptional|
          corepressor Sin3b) (Histone deacetylase complex subunit
          Sin3b)
          Length = 1098

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 87 GEGGWIGRGASGSNWDRGG*EAHER 13
          G GG  GRG  GS W R G   HE+
Sbjct: 5  GSGGSAGRGFGGSRWGRSGSGGHEK 29

to top

>VGLB_BHV1C (P12640) Glycoprotein I precursor (Glycoprotein GVP-6)|
           (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130)
           (Glycoprotein B)
          Length = 932

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 134 RGLAPPGAGNPRSTAAATMFWRMTGLSAASP 226
           RG A PGAG  R+  AA + W    L  A+P
Sbjct: 34  RGPAAPGAGGARAALAAALLWATWALLLAAP 64

to top

>SCRT1_MOUSE (Q99M85) Transcriptional repressor scratch 1 (Scratch homolog 1|
           zinc finger protein) (Scratch 1) (SCRT) (mScrt)
          Length = 348

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = -3

Query: 189 MVAAAV--DLGFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASGS 49
           M AAAV  +LG PA  G++P P P      RP+ AT  GG+I   A+ S
Sbjct: 68  MYAAAVRGELG-PAASGSAPPPTP------RPELATAAGGYINGDAAVS 109

to top

>SCRT1_HUMAN (Q9BWW7) Transcriptional repressor scratch 1 (Scratch homolog 1|
           zinc finger protein) (Scratch 1) (SCRT) (hScrt)
          Length = 348

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = -3

Query: 189 MVAAAV--DLGFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASGS 49
           M AAAV  +LG PA  G++P P P      RP+ AT  GG+I   A+ S
Sbjct: 68  MYAAAVRGELG-PAAAGSAPPPTP------RPELATAAGGYINGDAAVS 109

to top

>Y928_TREPA (O83898) Hypothetical protein TP0928|
          Length = 246

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +2

Query: 308 LNTRLINFLRDKAQVEQLLRYVV---EEVPDDAEKKRSFKFP-FIACEIFTC 451
           LN+R + F++D A+ E+  RYVV   E  P +   +     P F+ C  F C
Sbjct: 180 LNSRELRFVQDMAKKERSFRYVVLGEERFPAERVSRTGKSMPTFLPCITFPC 231

to top

>VGLB_BHV1P (P17471) Glycoprotein I precursor (Glycoprotein GVP-6)|
           (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130)
          Length = 928

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 134 RGLAPPGAGNPRSTAAATMFWRMTGLSAASP 226
           RG A PGAG  R+  AA + W    L  A+P
Sbjct: 34  RGPAAPGAGGARAALAAALLWATWALLLAAP 64

to top

>HTPX_RHILO (Q98ET0) Probable protease htpX homolog (EC 3.4.24.-)|
          Length = 336

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -3

Query: 192 NMVAAAVDLGFPAPGG--ASPRPNPRESGRRRPDWATGE 82
           N +AA  ++     GG  A+PRP PR++G ++P    G+
Sbjct: 268 NRIAALQEMAQQMAGGTQAAPRPTPRQAGEQQPSGPWGQ 306

to top

>FBRL_GIALA (Q24957) Fibrillarin|
          Length = 327

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
 Frame = -3

Query: 165 GFPAPGGASPRPNPRESGR-------RRPDWATGEGGWIGRGASGSNWDRGG*EAHERR 10
           G   PGG  P  + R+SGR        RPD+  G+GG  G G    +   GG +  +RR
Sbjct: 12  GRDGPGGRGPGNDRRDSGRSFGDRRPERPDFKRGDGG-RGFGDRRGSGPPGGPDRGDRR 69

to top

>SHAN3_HUMAN (Q9BYB0) SH3 and multiple ankyrin repeat domains protein 3 (Shank3)|
           (Proline-rich synapse-associated protein 2) (ProSAP2)
           (Fragment)
          Length = 797

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = -3

Query: 180 AAVDLGFPAPGGAS--PRPNPRESGRRRP--DWATGEGGWIGRGASGSNWDRGG*EAHER 13
           AA+ +G P PGG S    P+P   G R    D+  G+G  +  G  G   DR      ER
Sbjct: 33  AALAVGSPGPGGGSFAREPSPTHRGPRPGGLDYGAGDGPGLAFGGPGPAKDR---RLEER 89

Query: 12  RK 7
           R+
Sbjct: 90  RR 91

to top

>IF2_THEFY (Q47RV1) Translation initiation factor IF-2|
          Length = 955

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 12/48 (25%)
 Frame = -3

Query: 138 PRPNPRES------------GRRRPDWATGEGGWIGRGASGSNWDRGG 31
           PRP PR S            G  RP  ++  GG  GRG  G    RGG
Sbjct: 243 PRPGPRPSPMNMPASRPTPPGGARPSTSSRSGGGRGRGGGGGAGPRGG 290

to top

>CCA_AERPE (Q9YB04) CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA|
           nucleotidyltransferase) (tRNA adenylyl-/cytidylyl-
           transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT)
          Length = 435

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -3

Query: 162 FPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASG 52
           +P  G   P P  RE   R  +   GEGGW+  G  G
Sbjct: 330 YPIEGRLGPPPWERERAARFTEKRLGEGGWVWIGDDG 366

to top

>MYOB_DICDI (P34092) Myosin IB heavy chain|
          Length = 1111

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 150  GGASPRPNPRESGRRRPDWATGEGGWIGRGA 58
            GGA P P P++ G  RP  A  +GG   +GA
Sbjct: 975  GGARPMPQPQQGGGARPMGAPQQGGAPQQGA 1005

to top

>PIAS4_MOUSE (Q9JM05) Protein inhibitor of activated STAT protein 4 (Protein|
           inhibitor of activated STAT protein gamma) (PIAS-gamma)
           (PIASy)
          Length = 507

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = +2

Query: 125 GFGRGLAPPGAGNPRSTAAATMFWRMTGLSAASPVDTILDKENFTLEELLDEDE 286
           G G GL+ PG+    + AA ++     G + A  VD  LD  + + +E  DED+
Sbjct: 433 GIGSGLSGPGSAGSGAGAAGSL---ENGKTGADVVDLTLDSSSSSEDEDEDEDD 483

to top

>ROCK2_HUMAN (O75116) Rho-associated protein kinase 2 (EC 2.7.11.1)|
           (Rho-associated, coiled-coil-containing protein kinase
           2) (p164 ROCK-2) (Rho kinase 2)
          Length = 1388

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
 Frame = +2

Query: 239 LDKENFTLEELLD-----EDEVIQECKALNTRLINFLRDKAQVEQLLRYVVEEVPDDAEK 403
           + K+ +TLEE L      ++E+ Q+CK++NTRL    ++  + E  LR  VE      E+
Sbjct: 445 IQKKLYTLEEHLSNEMQAKEELEQKCKSVNTRLEKTAKE-LEEEITLRKSVESALRQLER 503

Query: 404 KRS 412
           +++
Sbjct: 504 EKA 506

to top

>ROCK2_BOVIN (Q28021) Rho-associated protein kinase 2 (EC 2.7.11.1)|
           (Rho-associated, coiled-coil-containing protein kinase
           2) (p164 ROCK-2)
          Length = 1388

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
 Frame = +2

Query: 239 LDKENFTLEELLD-----EDEVIQECKALNTRLINFLRDKAQVEQLLRYVVEEVPDDAEK 403
           + K+ +TLEE L      ++E+ Q+CK++NTRL    ++  + E  LR  VE      E+
Sbjct: 445 IQKKLYTLEEHLSTEIQAKEELEQKCKSVNTRLEKVAKE-LEEEITLRKNVESTLRQLER 503

Query: 404 KRS 412
           +++
Sbjct: 504 EKA 506

to top

>ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arabidopsis|
           thaliana envelope membrane integrase) (Ath4)
           (ALBINO3-like protein 1)
          Length = 1013

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = -3

Query: 165 GFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASGSNWDRGG*E 25
           G P+PGG S  P     G   P    G GG   +G  G    + G E
Sbjct: 404 GSPSPGGGSGSPPSTGGGSGSPPSTGGGGGSPSKGGGGGKSGKSGEE 450

to top

>ZN297_HUMAN (O15209) Zinc finger protein 297 (BING1 protein) (Zinc finger and|
           BTB domain-containing protein 22A)
          Length = 634

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
 Frame = +2

Query: 116 DSRGFGRGLAPPGAG--NPRSTAAATM---FWRMTGLSAASPVDTILDKENFTLEELLDE 280
           D  G GRG   PGAG   P  T  + M    W         P  T L  ++  LEE  +E
Sbjct: 266 DDGGDGRGAVVPGAGLRRPTYTPPSIMPQKHWVYVKRGGNCPAPTPLVPQDPDLEEEEEE 325

Query: 281 DEVIQECK 304
           ++++  C+
Sbjct: 326 EDLVLTCE 333

to top

>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)|
            (LC collagen)
          Length = 2944

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -3

Query: 165  GFPA-PGGASPRPNPRESGRRRPDWATGEGGWIGRGASGSNWDR 37
            GFP  PGG  P+ +  E+G +      GE G  G   S  N DR
Sbjct: 1901 GFPGVPGGTGPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDR 1944

to top

>US02_EHV1B (P28964) Gene 68 protein|
          Length = 418

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
 Frame = -3

Query: 210 RPVMRQNMVAAAVDLG----FPAPGGASPRPNPRESGRRRPDWA 91
           RP   + ++ A VD       PAPG   PR  P E G  RP+ A
Sbjct: 210 RPPTVKRVIYAVVDPARLREIPAPGRPLPRRRPSEGGDARPEAA 253

to top

>CI066_HUMAN (Q5T8R8) Protein C9orf66|
          Length = 295

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 24/61 (39%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
 Frame = -3

Query: 219 AAERPVMRQNMV--AAAVDLGFPAPGGASPRPNPR---ESGR-RRPDWATGEGGWIGRGA 58
           AAE      N+V  +A     FP     SPR   R     GR R P W  G GG  GRG 
Sbjct: 165 AAEHAQPSANLVCRSALETSAFPPSKPKSPRGRVRARSSDGRLRHPAWRAGSGGRGGRGP 224

Query: 57  S 55
           S
Sbjct: 225 S 225

to top

>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -3

Query: 168 LGFPAPGGASPRP-NPRESGRRRPDWATGEGGWIGR-GASG 52
           +GFP P GA+  P  P E G   P  A G  G  G  GA G
Sbjct: 569 MGFPGPKGAAGEPGKPGERGAPGPPGAVGAAGKDGEAGAQG 609

to top

>SOX12_MOUSE (Q04890) SOX-12 protein|
          Length = 314

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = -3

Query: 204 VMRQNMVAAAVDLGFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASG-SNWDRGG* 28
           +++Q    A  D G P PG     P P   G R P W     G I R  +    W +   
Sbjct: 1   MVQQRGARAKRDGGPPPPG-----PGPAAEGAREPGWCKTPSGHIKRPMNAFMVWSQ--- 52

Query: 27  EAHERRK 7
             HERRK
Sbjct: 53  --HERRK 57

to top

>RP54_XANCV (P77998) RNA polymerase sigma-54 factor|
          Length = 479

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
 Frame = -3

Query: 180 AAVDLGFPAPGGASPRPNPRES---GRRRPDWATGEGGWIGRGASGSNWDRGG*EAHER 13
           AA D+   +   AS     RE      R  DW+  E  W G G+ GS  D    +A ER
Sbjct: 56  AASDIAVDSSPSASTEQPQREEVAPAERDEDWSQDELQWTGSGSGGSFDDDESGDAAER 114

to top

>TOP3B_MOUSE (Q9Z321) DNA topoisomerase 3-beta-1 (EC 5.99.1.2) (DNA|
           topoisomerase III beta-1)
          Length = 862

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +2

Query: 95  QSGRRRPDSRGFGRGLAPPGAGNPR 169
           + G  R   RG GRG  PPG  NPR
Sbjct: 824 RGGPGRRQGRGRGRGRRPPGKPNPR 848

to top

>ZN297_MOUSE (Q9Z0G7) Zinc finger protein 297 (BING1 protein)|
          Length = 638

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
 Frame = +2

Query: 116 DSRGFGRGLAPPGAGNPRS-----TAAATMFWRMTGLSAASPVDTILDKENFTLEELLDE 280
           D  G GRG   PGAG  RS     +A     W     +   P    L  ++  LE+  +E
Sbjct: 267 DDGGDGRGAVAPGAGLRRSNCMPASAVPQKHWVYVKQARNCPAPASLVHQDPDLEDEEEE 326

Query: 281 DEVIQECK 304
           ++++  C+
Sbjct: 327 EDLVLTCE 334

to top

>MCHR1_MACMU (Q8MJ89) Melanin-concentrating hormone receptor 1 (MCH receptor 1)|
           (MCHR-1) (MCH-R1) (MCH1R) (MCH-1R) (MCHR) (G-protein
           coupled receptor 24) (Fragment)
          Length = 388

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
 Frame = -3

Query: 126 PRESGRR----RPDWATGEGGWIGRGASGSNW 43
           P + GRR    +P W  G   W+   A+G+ W
Sbjct: 4   PGQGGRRWRLPQPAWVEGSSAWLWEPATGTGW 35

to top

>TOP3A_DROME (Q9NG98) DNA topoisomerase 3-alpha (EC 5.99.1.2) (DNA topoisomerase|
           III alpha)
          Length = 1250

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
 Frame = -3

Query: 150 GGASPRPNPRESGRRRPDWATGEGGWI---GRGASGSNWDRGG 31
           GG  P P P   G  R     G GGW    G G SG     GG
Sbjct: 771 GGGGPGPGPGGGGSGR---GAGSGGWSSGPGGGGSGGGGGSGG 810

to top

>UL34_EBV (P03185) Protein BFRF1|
          Length = 336

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = -3

Query: 171 DLGFPAPGGASPRPNPRESGRRRPDWATGEGGW 73
           D G    GG  PRP    SG        G GGW
Sbjct: 199 DTGARVTGGGGPRPGVTHSGCLGDSHVRGRGGW 231

to top

>APS1_SCHPO (Q09790) Diphosphoinositol polyphosphate phosphohydrolase aps1 (EC|
           3.6.1.52) (Diadenosine 5',5'''-P1,P6-hexaphosphate
           hydrolase) (EC 3.6.1.-) (Ap6A hydrolase)
          Length = 210

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 5/41 (12%)
 Frame = -3

Query: 117 SGRRRPDWATGEGGW-----IGRGASGSNWDRGG*EAHERR 10
           S ++ P W   +GGW     + + A    W+ GG   H  R
Sbjct: 62  SAKKHPSWVVPKGGWEADESVQQAALREGWEEGGLVGHITR 102

to top

>MYSC_ACACA (P10569) Myosin IC heavy chain|
          Length = 1168

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = -3

Query: 165  GFPAPGGASPRPNPRESGRRRPDWATGEGGWIGRGASGS 49
            G PAPGGA+PR      GR  P    G GG  G G  G+
Sbjct: 1099 GMPAPGGAAPR------GRGAP--PPGAGGPPGGGRGGA 1129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,061,358
Number of Sequences: 219361
Number of extensions: 1044443
Number of successful extensions: 4520
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 4130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4503
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result