ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl56c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192531.1| Oryza sativa (japonica cultivar-group), predic... 321 1e-84
2dbj|AK099566.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 1e-59
3dbj|AK071878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 1e-59
4ref|XM_476020.1| Oryza sativa (japonica cultivar-group), predic... 228 1e-56
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
6dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
7gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 103 5e-19
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
9ref|NM_102783.4| Arabidopsis thaliana unknown protein AT1G30470 ... 64 4e-07
10ref|XM_473921.1| Oryza sativa (japonica cultivar-group), predic... 64 4e-07
11gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC F26G1... 64 4e-07
12dbj|AK066330.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
13ref|NM_128396.1| Arabidopsis thaliana unknown protein AT2G28360 ... 56 1e-04
14emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4,... 56 1e-04
15gb|AY136417.1| Arabidopsis thaliana unknown protein (At2g28360) ... 56 1e-04
16gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map ... 56 1e-04
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
18dbj|AP004505.1| Lotus japonicus genomic DNA, chromosome 3, clone... 56 1e-04
19dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
20gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.42
21emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536... 44 0.42
22gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca co... 42 1.6
23ref|XM_811829.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.6
24emb|CR722411.2|CNS0GKCX Tetraodon nigroviridis full-length cDNA 42 1.6
25emb|BX629355.3|CNS09SBR Tetraodon nigroviridis 42 1.6
26emb|AL732531.3|CNS08C96 Oryza sativa chromosome 12, . BAC OJ1005... 42 1.6
27gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
28gb|BC074599.1| Xenopus tropicalis MGC69468 protein, mRNA (cDNA c... 40 6.5
29gb|AC129943.8| Mus musculus chromosome 5, clone RP23-410M21, com... 40 6.5
30gb|AC129552.20| Mus musculus chromosome 5, clone RP24-122N24, co... 40 6.5
31gb|AC136999.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
32gb|AC006672.2| Caenorhabditis elegans cosmid K08D12, complete se... 40 6.5
33emb|CR790378.10| Zebrafish DNA sequence from clone DKEY-112E17 i... 40 6.5
34emb|BX682239.3| Human DNA sequence from clone WI2-80732C2 on chr... 40 6.5
35emb|AL137857.29| Human DNA sequence from clone RP5-1166H10 on ch... 40 6.5
36ref|XM_965216.1| PREDICTED: Tribolium castaneum similar to CG146... 40 6.5
37emb|BX058202.1|CNS09H2M Single read from an extremity of a full-... 40 6.5
38emb|BX058201.1|CNS09H2L Single read from an extremity of a full-... 40 6.5
39gb|DQ116389.1| Oryza sativa (japonica cultivar-group) hexokinase... 40 6.5
40dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.5
41ref|NM_171274.2| Caenorhabditis elegans K08D12.3b (K08D12.3) mRN... 40 6.5
42ref|NM_171273.2| Caenorhabditis elegans K08D12.3a (K08D12.3) mRN... 40 6.5
43dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
44gb|AF262336.1|AF262336 Danio rerio beta-spectrin (sptb) mRNA, co... 40 6.5
45gb|AC097373.3| Homo sapiens BAC clone RP11-64M20 from 4, complet... 40 6.5
46ref|NM_001004819.1| Xenopus tropicalis MGC69468 protein (MGC6946... 40 6.5
47dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.5
48gb|AY884169.1| Oryza sativa (japonica cultivar-group) hexokinase... 40 6.5
49dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.5
50dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
51dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
52dbj|AK067988.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
53emb|CR761302.2| Xenopus tropicalis finished cDNA, clone TEgg050d11 40 6.5
54gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.5
55ref|NM_131525.1| Danio rerio spectrin, beta, erythrocytic (sptb)... 40 6.5
56gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
57gb|AC016586.9| Homo sapiens chromosome 19 clone CTD-2622I13, com... 40 6.5 
>ref|NM_192531.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2370

 Score =  321 bits (162), Expect = 1e-84
 Identities = 229/254 (90%)
 Strand = Plus / Plus

                                                                       
Query: 227 gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 286
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 172 gtggatacaatcctagacaaggaaaattttacactggaagaacttcttgacgaggatgaa 231

                                                                       
Query: 287 gttattcaagagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaaggcc 346
            ||||||||||||||||||| ||||| || ||||||||||||||| |||||||||  |||
Sbjct: 232 attattcaagagtgcaaagctctgaatacacgactcataaatttcttgcgtgacagagcc 291

                                                                       
Query: 347 caggtcgaacaattgcttcgttatgttgttgaagaagttccggatgatgctgnnnnnnnn 406
           ||||| || |||||||||||||||||||| |||||||| || ||||||||||        
Sbjct: 292 caggtggagcaattgcttcgttatgttgtggaagaagtaccagatgatgctgaaaaaaag 351

                                                                       
Query: 407 cgctctttcaagttccctttcattgcttgtgagatatttacttgtgaaatcgatgtcatt 466
           |||||||||||||| || ||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 352 cgctctttcaagtttccattcattgcttgtgagatatttacatgtgaaattgatgtcatt 411

                         
Query: 467 ttgaggaccctagt 480
           ||||||||||||||
Sbjct: 412 ttgaggaccctagt 425



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 188 atgttttggcgcatgaccggtctctccgcggcctcgcccgt 228
           ||||| |||||||||||||| || |||||||||||||||||
Sbjct: 1   atgttctggcgcatgaccggcctgtccgcggcctcgcccgt 41
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>dbj|AK099566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M16, full
           insert sequence
          Length = 3155

 Score =  238 bits (120), Expect = 1e-59
 Identities = 259/308 (84%)
 Strand = Plus / Plus

                                                                       
Query: 175 cgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcccgtggatac 234
           ||||| |||| ||||||| ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 211 cgccgtcgccgccatgttctggcgcatgactggtctctccgcggcctcgccggtggatac 270

                                                                       
Query: 235 aatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaagttattca 294
           ||| ||||||||||| || || ||| | |||||||||||||||||||||||| | |||||
Sbjct: 271 aattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaaataattca 330

                                                                       
Query: 295 agagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaaggcccaggtcga 354
            ||||||||||| ||||| || || |||||||||||| |||| |||||||| || || ||
Sbjct: 331 ggagtgcaaagcgctgaatactcgtctcataaatttcttgcgagacaaggctcaagtgga 390

                                                                       
Query: 355 acaattgcttcgttatgttgttgaagaagttccggatgatgctgnnnnnnnncgctcttt 414
            ||||||||||||||  | || |||||||| || || ||| |||        || |||||
Sbjct: 391 gcaattgcttcgttacatcgtggaagaagtaccagaagattctgaaaagaaacgttcttt 450

                                                                       
Query: 415 caagttccctttcattgcttgtgagatatttacttgtgaaatcgatgtcattttgaggac 474
            |||||||| ||||||||||||||||||||||| |||||||| ||  |||| ||||||||
Sbjct: 451 taagttcccattcattgcttgtgagatatttacctgtgaaattgacatcatcttgaggac 510

                   
Query: 475 cctagtag 482
           | ||||||
Sbjct: 511 cttagtag 518
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>dbj|AK071878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039C12, full
           insert sequence
          Length = 2733

 Score =  238 bits (120), Expect = 1e-59
 Identities = 259/308 (84%)
 Strand = Plus / Plus

                                                                       
Query: 175 cgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcccgtggatac 234
           ||||| |||| ||||||| ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 198 cgccgtcgccgccatgttctggcgcatgactggtctctccgcggcctcgccggtggatac 257

                                                                       
Query: 235 aatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaagttattca 294
           ||| ||||||||||| || || ||| | |||||||||||||||||||||||| | |||||
Sbjct: 258 aattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaaataattca 317

                                                                       
Query: 295 agagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaaggcccaggtcga 354
            ||||||||||| ||||| || || |||||||||||| |||| |||||||| || || ||
Sbjct: 318 ggagtgcaaagcgctgaatactcgtctcataaatttcttgcgagacaaggctcaagtgga 377

                                                                       
Query: 355 acaattgcttcgttatgttgttgaagaagttccggatgatgctgnnnnnnnncgctcttt 414
            ||||||||||||||  | || |||||||| || || ||| |||        || |||||
Sbjct: 378 gcaattgcttcgttacatcgtggaagaagtaccagaagattctgaaaagaaacgttcttt 437

                                                                       
Query: 415 caagttccctttcattgcttgtgagatatttacttgtgaaatcgatgtcattttgaggac 474
            |||||||| ||||||||||||||||||||||| |||||||| ||  |||| ||||||||
Sbjct: 438 taagttcccattcattgcttgtgagatatttacctgtgaaattgacatcatcttgaggac 497

                   
Query: 475 cctagtag 482
           | ||||||
Sbjct: 498 cttagtag 505
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>ref|XM_476020.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2313

 Score =  228 bits (115), Expect = 1e-56
 Identities = 248/295 (84%)
 Strand = Plus / Plus

                                                                       
Query: 188 atgttttggcgcatgaccggtctctccgcggcctcgcccgtggatacaatcctagacaag 247
           ||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 1   atgttctggcgcatgactggtctctccgcggcctcgccggtggatacaattctagacaag 60

                                                                       
Query: 248 gaaaattttacacttgaagaacttcttgacgaggatgaagttattcaagagtgcaaagca 307
           || || || ||| | |||||||||||||||||||||||| | ||||| ||||||||||| 
Sbjct: 61  gagaacttcacattagaagaacttcttgacgaggatgaaataattcaggagtgcaaagcg 120

                                                                       
Query: 308 ctgaacacccgactcataaatttcctgcgtgacaaggcccaggtcgaacaattgcttcgt 367
           ||||| || || |||||||||||| |||| |||||||| || || || ||||||||||||
Sbjct: 121 ctgaatactcgtctcataaatttcttgcgagacaaggctcaagtggagcaattgcttcgt 180

                                                                       
Query: 368 tatgttgttgaagaagttccggatgatgctgnnnnnnnncgctctttcaagttccctttc 427
           ||  | || |||||||| || || ||| |||        || ||||| |||||||| |||
Sbjct: 181 tacatcgtggaagaagtaccagaagattctgaaaagaaacgttcttttaagttcccattc 240

                                                                  
Query: 428 attgcttgtgagatatttacttgtgaaatcgatgtcattttgaggaccctagtag 482
           |||||||||||||||||||| |||||||| ||  |||| ||||||||| ||||||
Sbjct: 241 attgcttgtgagatatttacctgtgaaattgacatcatcttgaggaccttagtag 295
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  167 bits (84), Expect = 4e-38
 Identities = 99/104 (95%)
 Strand = Plus / Plus

                                                                            
Query: 227      gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 286
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 22772327 gtggatacaatcctagacaaggaaaattttacactggaagaacttcttgacgaggatgaa 22772386

                                                            
Query: 287      gttattcaagagtgcaaagcactgaacacccgactcataaattt 330
                 ||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 22772387 attattcaagagtgcaaagctctgaatacacgactcataaattt 22772430



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                        
Query: 425      ttcattgcttgtgagatatttacttgtgaaatcgatgtcattttgaggaccctagt 480
                ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 22773219 ttcattgcttgtgagatatttacatgtgaaattgatgtcattttgaggaccctagt 22773274



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 69/78 (88%), Gaps = 3/78 (3%)
 Strand = Plus / Plus

                                                                            
Query: 155      gccggaaaccctagatccaccgccgcc---gccaccatgttttggcgcatgaccggtctc 211
                |||||||||||||||||| || |||||   ||| ||||||| |||||||||||||| || 
Sbjct: 22771392 gccggaaaccctagatccgcctccgcctccgccgccatgttctggcgcatgaccggcctg 22771451

                                  
Query: 212      tccgcggcctcgcccgtg 229
                ||||||||||||||||||
Sbjct: 22771452 tccgcggcctcgcccgtg 22771469



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                            
Query: 333      tgcgtgacaaggcccaggtcgaacaattgcttcgttatgttgttgaagaagttccggatg 392
                |||||||||  |||||||| || |||||||||||||||||||| |||||||| || ||||
Sbjct: 22773045 tgcgtgacagagcccaggtggagcaattgcttcgttatgttgtggaagaagtaccagatg 22773104

                      
Query: 393      atgctg 398
                ||||||
Sbjct: 22773105 atgctg 22773110



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 36       cgcgatcccaattcgatccgctc 58
                |||||||||||||||||||||||
Sbjct: 22771240 cgcgatcccaattcgatccgctc 22771262



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 4        ttttttcctcctctcgtgcgcctc 27
                |||| |||||||||||||||||||
Sbjct: 22771192 ttttctcctcctctcgtgcgcctc 22771215
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>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0712E02
          Length = 158084

 Score =  167 bits (84), Expect = 4e-38
 Identities = 99/104 (95%)
 Strand = Plus / Plus

                                                                         
Query: 227   gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 286
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 89716 gtggatacaatcctagacaaggaaaattttacactggaagaacttcttgacgaggatgaa 89775

                                                         
Query: 287   gttattcaagagtgcaaagcactgaacacccgactcataaattt 330
              ||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 89776 attattcaagagtgcaaagctctgaatacacgactcataaattt 89819



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 54/56 (96%)
 Strand = Plus / Plus

                                                                     
Query: 425   ttcattgcttgtgagatatttacttgtgaaatcgatgtcattttgaggaccctagt 480
             ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 90608 ttcattgcttgtgagatatttacatgtgaaattgatgtcattttgaggaccctagt 90663



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 69/78 (88%), Gaps = 3/78 (3%)
 Strand = Plus / Plus

                                                                         
Query: 155   gccggaaaccctagatccaccgccgcc---gccaccatgttttggcgcatgaccggtctc 211
             |||||||||||||||||| || |||||   ||| ||||||| |||||||||||||| || 
Sbjct: 88781 gccggaaaccctagatccgcctccgcctccgccgccatgttctggcgcatgaccggcctg 88840

                               
Query: 212   tccgcggcctcgcccgtg 229
             ||||||||||||||||||
Sbjct: 88841 tccgcggcctcgcccgtg 88858



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                         
Query: 333   tgcgtgacaaggcccaggtcgaacaattgcttcgttatgttgttgaagaagttccggatg 392
             |||||||||  |||||||| || |||||||||||||||||||| |||||||| || ||||
Sbjct: 90434 tgcgtgacagagcccaggtggagcaattgcttcgttatgttgtggaagaagtaccagatg 90493

                   
Query: 393   atgctg 398
             ||||||
Sbjct: 90494 atgctg 90499



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 36    cgcgatcccaattcgatccgctc 58
             |||||||||||||||||||||||
Sbjct: 88629 cgcgatcccaattcgatccgctc 88651



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 4     ttttttcctcctctcgtgcgcctc 27
             |||| |||||||||||||||||||
Sbjct: 88581 ttttctcctcctctcgtgcgcctc 88604
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score =  103 bits (52), Expect = 5e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                         
Query: 227   gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 286
             ||||||||||| ||||||||||| || || ||| | ||||||||||||||||||||||||
Sbjct: 79883 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 79942

                                                         
Query: 287   gttattcaagagtgcaaagcactgaacacccgactcataaattt 330
              | ||||| ||||||||||| ||||| || || |||||||||||
Sbjct: 79943 ataattcaggagtgcaaagcgctgaatactcgtctcataaattt 79986



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                         
Query: 418   gttccctttcattgcttgtgagatatttacttgtgaaatcgatgtcattttgaggaccct 477
             |||||| ||||||||||||||||||||||| |||||||| ||  |||| ||||||||| |
Sbjct: 80528 gttcccattcattgcttgtgagatatttacctgtgaaattgacatcatcttgaggacctt 80587

                  
Query: 478   agtag 482
             |||||
Sbjct: 80588 agtag 80592



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                
Query: 175   cgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcc 225
             ||||| |||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 78773 cgccgtcgccgccatgttctggcgcatgactggtctctccgcggcctcgcc 78823
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  103 bits (52), Expect = 5e-19
 Identities = 91/104 (87%)
 Strand = Plus / Plus

                                                                            
Query: 227      gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 286
                ||||||||||| ||||||||||| || || ||| | ||||||||||||||||||||||||
Sbjct: 29301226 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 29301285

                                                            
Query: 287      gttattcaagagtgcaaagcactgaacacccgactcataaattt 330
                 | ||||| ||||||||||| ||||| || || |||||||||||
Sbjct: 29301286 ataattcaggagtgcaaagcgctgaatactcgtctcataaattt 29301329



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                            
Query: 418      gttccctttcattgcttgtgagatatttacttgtgaaatcgatgtcattttgaggaccct 477
                |||||| ||||||||||||||||||||||| |||||||| ||  |||| ||||||||| |
Sbjct: 29301871 gttcccattcattgcttgtgagatatttacctgtgaaattgacatcatcttgaggacctt 29301930

                     
Query: 478      agtag 482
                |||||
Sbjct: 29301931 agtag 29301935



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                   
Query: 175      cgccgccgccaccatgttttggcgcatgaccggtctctccgcggcctcgcc 225
                ||||| |||| ||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 29300116 cgccgtcgccgccatgttctggcgcatgactggtctctccgcggcctcgcc 29300166



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 166      tagatccaccgccgccgcca 185
                ||||||||||||||||||||
Sbjct: 16893016 tagatccaccgccgccgcca 16892997



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 171     ccaccgccgccgccaccatg 190
               ||||||||||||||||||||
Sbjct: 5284616 ccaccgccgccgccaccatg 5284635
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>ref|NM_102783.4| Arabidopsis thaliana unknown protein AT1G30470 mRNA, complete cds
          Length = 2939

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 269 cttcttgacgaggatgaagttattcaagagtgcaaagcactgaa 312
           |||||||||||||||||| |||||||||| |||||||| |||||
Sbjct: 334 cttcttgacgaggatgaaattattcaagaatgcaaagccctgaa 377
to top
>ref|XM_473921.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2331

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                       
Query: 227 gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 286
           |||||||| ||  |||||||||||||||| |   | || || |||||||| |||||||||
Sbjct: 40  gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 99

                                                                   
Query: 287 gttattcaagagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaa 342
            | || || |||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 100 ataatccaggagtgcaaagcactaaacacccgcctaatcaattttctgcgggacaa 155
to top
>gb|AC009917.2|F26G16 Arabidopsis thaliana chromosome 1 BAC F26G16 sequence, complete
             sequence
          Length = 75799

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 269   cttcttgacgaggatgaagttattcaagagtgcaaagcactgaa 312
             |||||||||||||||||| |||||||||| |||||||| |||||
Sbjct: 31059 cttcttgacgaggatgaaattattcaagaatgcaaagccctgaa 31102
to top
>dbj|AK066330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061K16, full
           insert sequence
          Length = 2332

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 95/116 (81%)
 Strand = Plus / Plus

                                                                       
Query: 227 gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 286
           |||||||| ||  |||||||||||||||| |   | || || |||||||| |||||||||
Sbjct: 388 gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 447

                                                                   
Query: 287 gttattcaagagtgcaaagcactgaacacccgactcataaatttcctgcgtgacaa 342
            | || || |||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct: 448 ataatccaggagtgcaaagcactaaacacccgcctaatcaattttctgcgggacaa 503
to top
>ref|NM_128396.1| Arabidopsis thaliana unknown protein AT2G28360 mRNA, complete cds
          Length = 2481

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 263 gaagaacttcttgacgaggatgaagttattcaagagtgcaaagcactgaacacccgactc 322
           ||||| |||||||||||||| ||  |||||||||| ||||||||  |||| | |||||||
Sbjct: 229 gaagagcttcttgacgaggaagagattattcaagaatgcaaagctttgaatagccgactc 288

                   
Query: 323 ataaattt 330
           || |||||
Sbjct: 289 attaattt 296
to top
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23,
              complete sequence
          Length = 164805

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Plus

                                                                          
Query: 227    gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 286
              |||||||| ||  |||||||||||||||| |   | || || |||||||| |||||||||
Sbjct: 145165 gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 145224

                                              
Query: 287    gttattcaagagtgcaaagcactgaacacccg 318
               | || || |||||||||||||| ||||||||
Sbjct: 145225 ataatccaggagtgcaaagcactaaacacccg 145256
to top
>gb|AY136417.1| Arabidopsis thaliana unknown protein (At2g28360) mRNA, complete cds
          Length = 3033

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 263 gaagaacttcttgacgaggatgaagttattcaagagtgcaaagcactgaacacccgactc 322
           ||||| |||||||||||||| ||  |||||||||| ||||||||  |||| | |||||||
Sbjct: 266 gaagagcttcttgacgaggaagagattattcaagaatgcaaagctttgaatagccgactc 325

                   
Query: 323 ataaattt 330
           || |||||
Sbjct: 326 attaattt 333
to top
>gb|AC006283.6| Arabidopsis thaliana chromosome 2 clone T1B3 map mi54, complete
             sequence
          Length = 93122

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                         
Query: 263   gaagaacttcttgacgaggatgaagttattcaagagtgcaaagcactgaacacccgactc 322
             ||||| |||||||||||||| ||  |||||||||| ||||||||  |||| | |||||||
Sbjct: 40953 gaagagcttcttgacgaggaagagattattcaagaatgcaaagctttgaatagccgactc 41012

                     
Query: 323   ataaattt 330
             || |||||
Sbjct: 41013 attaattt 41020
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Plus

                                                                            
Query: 227      gtggatacaatcctagacaaggaaaattttacacttgaagaacttcttgacgaggatgaa 286
                |||||||| ||  |||||||||||||||| |   | || || |||||||| |||||||||
Sbjct: 31567482 gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 31567541

                                                
Query: 287      gttattcaagagtgcaaagcactgaacacccg 318
                 | || || |||||||||||||| ||||||||
Sbjct: 31567542 ataatccaggagtgcaaagcactaaacacccg 31567573
to top
>dbj|AP004505.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT10E18, TM0035,
             complete sequence
          Length = 106041

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 428   attgcttgtgagatatttacttgtgaaatcgatgtcattttgaggacc 475
             |||||||||||||| || || |||||||| ||||||||||||| ||||
Sbjct: 34496 attgcttgtgagattttcacatgtgaaattgatgtcattttgaagacc 34543
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 165      ctagatccaccgccgccgccac 186
                ||||||||||||||||||||||
Sbjct: 19118826 ctagatccaccgccgccgccac 19118805



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 167     agatccaccgccgccgccacc 187
               |||||||||||||||||||||
Sbjct: 8049192 agatccaccgccgccgccacc 8049172
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 165      ctagatccaccgccgccgccac 186
                ||||||||||||||||||||||
Sbjct: 19045053 ctagatccaccgccgccgccac 19045032



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 167     agatccaccgccgccgccacc 187
               |||||||||||||||||||||
Sbjct: 8049073 agatccaccgccgccgccacc 8049053
to top
>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 127026

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 165    ctagatccaccgccgccgccac 186
              ||||||||||||||||||||||
Sbjct: 107153 ctagatccaccgccgccgccac 107174
to top
>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete
              genome
          Length = 686194

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 440    atatttacttgtgaaatcgat 460
              |||||||||||||||||||||
Sbjct: 624233 atatttacttgtgaaatcgat 624253
to top
>ref|XM_811829.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509693.130) partial mRNA
          Length = 774

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 167 agatccaccgccgccgccacc 187
           |||||||||||||||||||||
Sbjct: 744 agatccaccgccgccgccacc 764
to top
>emb|CR722411.2|CNS0GKCX Tetraodon nigroviridis full-length cDNA
          Length = 410

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 171 ccaccgccgccgccaccatgt 191
           |||||||||||||||||||||
Sbjct: 17  ccaccgccgccgccaccatgt 37
to top
>emb|BX629355.3|CNS09SBR Tetraodon nigroviridis
          Length = 128373

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 171   ccaccgccgccgccaccatgt 191
             |||||||||||||||||||||
Sbjct: 72803 ccaccgccgccgccaccatgt 72783
to top
>emb|AL732531.3|CNS08C96 Oryza sativa chromosome 12, . BAC OJ1005_G05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151117

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 167   agatccaccgccgccgccacc 187
             |||||||||||||||||||||
Sbjct: 94486 agatccaccgccgccgccacc 94506
to top
>gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1045_C06,
              complete sequence
          Length = 143130

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    tagatccaccgccgccgcca 185
              ||||||||||||||||||||
Sbjct: 105502 tagatccaccgccgccgcca 105483
to top
>gb|BC074599.1| Xenopus tropicalis MGC69468 protein, mRNA (cDNA clone MGC:69468
           IMAGE:5336075), complete cds
          Length = 1425

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 ccaccgccgccgccaccatg 190
           ||||||||||||||||||||
Sbjct: 792 ccaccgccgccgccaccatg 773
to top
>gb|AC129943.8| Mus musculus chromosome 5, clone RP23-410M21, complete sequence
          Length = 178544

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   aaattttacacttgaagaac 269
             ||||||||||||||||||||
Sbjct: 60716 aaattttacacttgaagaac 60697
to top
>gb|AC129552.20| Mus musculus chromosome 5, clone RP24-122N24, complete sequence
          Length = 153520

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   ccaccgccgccgccaccatg 190
             ||||||||||||||||||||
Sbjct: 10925 ccaccgccgccgccaccatg 10906
to top
>gb|AC136999.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0009L15, complete sequence
          Length = 137570

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   tagatccaccgccgccgcca 185
             ||||||||||||||||||||
Sbjct: 24059 tagatccaccgccgccgcca 24040
to top
>gb|AC006672.2| Caenorhabditis elegans cosmid K08D12, complete sequence
          Length = 33673

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   gatccaccgccgccgccacc 187
             ||||||||||||||||||||
Sbjct: 15746 gatccaccgccgccgccacc 15727
to top
>emb|CR790378.10| Zebrafish DNA sequence from clone DKEY-112E17 in linkage group 5,
            complete sequence
          Length = 160791

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 285  aagttattcaagagtgcaaa 304
            ||||||||||||||||||||
Sbjct: 9473 aagttattcaagagtgcaaa 9454
to top
>emb|BX682239.3| Human DNA sequence from clone WI2-80732C2 on chromosome X, complete
            sequence
          Length = 12711

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 419  ttccctttcattgcttgtga 438
            ||||||||||||||||||||
Sbjct: 1190 ttccctttcattgcttgtga 1209
to top
>emb|AL137857.29| Human DNA sequence from clone RP5-1166H10 on chromosome 1p33-35.1
             Contains the MATN1 gene for matrilin 1 cartilage matrix
             protein, a novel gene (FLJ46197, FLJ33163), the 3' end of
             the gene for Lysosomal-associated multispanning membrane
             protein-5 (LAPTM5) and a CpG island, complete sequence
          Length = 152042

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    cccctctcccgatccacccc 79
             ||||||||||||||||||||
Sbjct: 29584 cccctctcccgatccacccc 29565
to top
>ref|XM_965216.1| PREDICTED: Tribolium castaneum similar to CG14622-PC, isoform C
            (LOC658864), mRNA
          Length = 3767

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  tccaccgccgccgccaccat 189
            ||||||||||||||||||||
Sbjct: 1791 tccaccgccgccgccaccat 1810
to top
>emb|BX058202.1|CNS09H2M Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC38BH02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 328

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 174 ccgccgccgccaccatgttttggc 197
           ||||||||||||||||||| ||||
Sbjct: 271 ccgccgccgccaccatgttctggc 294
to top
>emb|BX058201.1|CNS09H2L Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC38BH02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 957

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 174 ccgccgccgccaccatgttttggc 197
           ||||||||||||||||||| ||||
Sbjct: 745 ccgccgccgccaccatgttctggc 722
to top
>gb|DQ116389.1| Oryza sativa (japonica cultivar-group) hexokinase 7 (HXK7) mRNA,
           complete cds
          Length = 1816

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 ccaccgccgccgccaccatg 190
           ||||||||||||||||||||
Sbjct: 111 ccaccgccgccgccaccatg 92
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 97      atccggccgccgccgcccgg 116
               ||||||||||||||||||||
Sbjct: 2015886 atccggccgccgccgcccgg 2015867



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 100     cggccgccgccgcccggatt 119
               ||||||||||||||||||||
Sbjct: 1120760 cggccgccgccgcccggatt 1120741
to top
>ref|NM_171274.2| Caenorhabditis elegans K08D12.3b (K08D12.3) mRNA, complete cds
          Length = 376

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 gatccaccgccgccgccacc 187
           ||||||||||||||||||||
Sbjct: 242 gatccaccgccgccgccacc 223
to top
>ref|NM_171273.2| Caenorhabditis elegans K08D12.3a (K08D12.3) mRNA, complete cds
          Length = 672

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 gatccaccgccgccgccacc 187
           ||||||||||||||||||||
Sbjct: 212 gatccaccgccgccgccacc 193
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 100      cggccgccgccgcccggattcgcg 123
                |||||| |||||||||||||||||
Sbjct: 28975145 cggccggcgccgcccggattcgcg 28975168
to top
>gb|AF262336.1|AF262336 Danio rerio beta-spectrin (sptb) mRNA, complete cds
          Length = 7371

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 326  aatttcctgcgtgacaaggcccag 349
            ||||||||||||||| ||||||||
Sbjct: 3058 aatttcctgcgtgacgaggcccag 3081
to top
>gb|AC097373.3| Homo sapiens BAC clone RP11-64M20 from 4, complete sequence
          Length = 145580

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 449   tgtgaaatcgatgtcatttt 468
             ||||||||||||||||||||
Sbjct: 79144 tgtgaaatcgatgtcatttt 79163
to top
>ref|NM_001004819.1| Xenopus tropicalis MGC69468 protein (MGC69468), mRNA
          Length = 1425

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 ccaccgccgccgccaccatg 190
           ||||||||||||||||||||
Sbjct: 792 ccaccgccgccgccaccatg 773
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 97      atccggccgccgccgcccgg 116
               ||||||||||||||||||||
Sbjct: 2711404 atccggccgccgccgcccgg 2711423
to top
>gb|AY884169.1| Oryza sativa (japonica cultivar-group) hexokinase 6 (HXK6) mRNA,
           complete cds
          Length = 1652

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 ccaccgccgccgccaccatg 190
           ||||||||||||||||||||
Sbjct: 101 ccaccgccgccgccaccatg 82
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 94      ccaatccggccgccgccgcc 113
               ||||||||||||||||||||
Sbjct: 2495246 ccaatccggccgccgccgcc 2495265
to top
>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0724B10
          Length = 169143

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   cggccgccgccgcccggattcgcg 123
             |||||| |||||||||||||||||
Sbjct: 21310 cggccggcgccgcccggattcgcg 21333
to top
>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1218_D07
          Length = 114511

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   cggccgccgccgcccggattcgcg 123
             |||||| |||||||||||||||||
Sbjct: 58203 cggccggcgccgcccggattcgcg 58226
to top
>dbj|AK067988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D05, full
           insert sequence
          Length = 1777

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 ccaccgccgccgccaccatg 190
           ||||||||||||||||||||
Sbjct: 147 ccaccgccgccgccaccatg 128
to top
>emb|CR761302.2| Xenopus tropicalis finished cDNA, clone TEgg050d11
          Length = 1306

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 ccaccgccgccgccaccatg 190
           ||||||||||||||||||||
Sbjct: 723 ccaccgccgccgccaccatg 704
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    agatccaccgccgccgccac 186
              ||||||||||||||||||||
Sbjct: 380562 agatccaccgccgccgccac 380543
to top
>ref|NM_131525.1| Danio rerio spectrin, beta, erythrocytic (sptb), mRNA
          Length = 7371

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 326  aatttcctgcgtgacaaggcccag 349
            ||||||||||||||| ||||||||
Sbjct: 3058 aatttcctgcgtgacgaggcccag 3081
to top
>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12,
             complete sequence
          Length = 88725

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   ccaccgccgccgccaccatg 190
             ||||||||||||||||||||
Sbjct: 21317 ccaccgccgccgccaccatg 21336
to top
>gb|AC016586.9| Homo sapiens chromosome 19 clone CTD-2622I13, complete sequence
          Length = 205642

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    cccccttccccggtcgccca 96
             ||||||||||||||||||||
Sbjct: 85744 cccccttccccggtcgccca 85725


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,562,945
Number of Sequences: 3902068
Number of extensions: 4562945
Number of successful extensions: 124794
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122597
Number of HSP's gapped (non-prelim): 2191
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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