Clone Name | bastl56c02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | WOX9_ARATH (Q6X7J4) WUSCHEL-related homeobox 9 | 29 | 4.4 | 2 | RL15_BRUSU (Q8G090) 50S ribosomal protein L15 | 28 | 9.9 | 3 | RL15_BRUME (Q8YHM1) 50S ribosomal protein L15 | 28 | 9.9 | 4 | RL15_BRUAB (Q57CS7) 50S ribosomal protein L15 | 28 | 9.9 |
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>WOX9_ARATH (Q6X7J4) WUSCHEL-related homeobox 9| Length = 378 Score = 29.3 bits (64), Expect = 4.4 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -2 Query: 244 KHPPPQNRPQGAQQPRTSDSXXXXXXXAESTRETK 140 KH PQ +PQ QP S S ++ST+ K Sbjct: 123 KHSLPQTQPQPQPQPSASSSSSSSSSSSKSTKPRK 157
>RL15_BRUSU (Q8G090) 50S ribosomal protein L15| Length = 156 Score = 28.1 bits (61), Expect = 9.9 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 220 VYFEVAGVCVPAMEEPNAGGGAVAAPEVIAD 312 V FEVAG A+E+ GG++ PE A+ Sbjct: 126 VAFEVAGASKAAVEKIEKAGGSIKLPEAAAE 156
>RL15_BRUME (Q8YHM1) 50S ribosomal protein L15| Length = 156 Score = 28.1 bits (61), Expect = 9.9 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 220 VYFEVAGVCVPAMEEPNAGGGAVAAPEVIAD 312 V FEVAG A+E+ GG++ PE A+ Sbjct: 126 VAFEVAGASKAAVEKIEKAGGSIKLPEAAAE 156
>RL15_BRUAB (Q57CS7) 50S ribosomal protein L15| Length = 156 Score = 28.1 bits (61), Expect = 9.9 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 220 VYFEVAGVCVPAMEEPNAGGGAVAAPEVIAD 312 V FEVAG A+E+ GG++ PE A+ Sbjct: 126 VAFEVAGASKAAVEKIEKAGGSIKLPEAAAE 156 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,393,278 Number of Sequences: 219361 Number of extensions: 414772 Number of successful extensions: 1530 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1369 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1527 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)