Clone Name | bastl56b11 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 389 bits (196), Expect = e-105 Identities = 337/384 (87%) Strand = Plus / Plus Query: 18 aaatcatctacgcccagcactaccaggttccacttcaccactatcccttatgatgcgtga 77 |||||| ||||||||| || | ||||| |||||||||||| |||| ||||||||||||| Sbjct: 221326 aaatcagctacgcccaacagttccaggctccacttcaccattatctgttatgatgcgtga 221385 Query: 78 actaggcattctgttcacggcagaaacccataattttccatgtgccgtggcaccctaccc 137 || | ||| | ||||| |||||||||||||||||||||||||| |||||||| || || Sbjct: 221386 gcttgatattttattcacagcagaaacccataattttccatgtgctgtggcaccttatcc 221445 Query: 138 aggagctgaaacaggtgcaggtggccgcataagggacacacatgccactggaaagggctc 197 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 221446 aggagctgaaacaggtgcaggtggtcgcataagggacacacatgccactggaaagggttc 221505 Query: 198 atttgttgttgcttcaactgctggttattgtgttggaaaccttcaaattgaagaatcata 257 |||||||||||||| |||||||| ||||||||||| || || | |||||||| |||| Sbjct: 221506 ttttgttgttgcttctactgctggctattgtgttggtaatctccgaattgaaggtgcata 221565 Query: 258 tgcaccttgggaggattcatccttttcatacccatcaaacttagcttccccgttgcagat 317 |||||| ||||||||| ||||||||||||| | || || || || ||||| ||||| || Sbjct: 221566 tgcaccctgggaggatccatccttttcatatctgtcgaatttggcctcccctttgcaaat 221625 Query: 318 tcttattgatgctagcgacggtgcttctgactatgggaacaagtttggcgagcctttaat 377 |||||||||||||||||| || |||||||||||||||||||||||||| || ||| |||| Sbjct: 221626 tcttattgatgctagcgatggcgcttctgactatgggaacaagtttggtgaacctctaat 221685 Query: 378 tcagggatttacaagaaattttgg 401 |||||||||||| ||||||||||| Sbjct: 221686 tcagggatttactagaaattttgg 221709
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12, complete sequence Length = 160603 Score = 389 bits (196), Expect = e-105 Identities = 337/384 (87%) Strand = Plus / Plus Query: 18 aaatcatctacgcccagcactaccaggttccacttcaccactatcccttatgatgcgtga 77 |||||| ||||||||| || | ||||| |||||||||||| |||| ||||||||||||| Sbjct: 103510 aaatcagctacgcccaacagttccaggctccacttcaccattatctgttatgatgcgtga 103569 Query: 78 actaggcattctgttcacggcagaaacccataattttccatgtgccgtggcaccctaccc 137 || | ||| | ||||| |||||||||||||||||||||||||| |||||||| || || Sbjct: 103570 gcttgatattttattcacagcagaaacccataattttccatgtgctgtggcaccttatcc 103629 Query: 138 aggagctgaaacaggtgcaggtggccgcataagggacacacatgccactggaaagggctc 197 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 103630 aggagctgaaacaggtgcaggtggtcgcataagggacacacatgccactggaaagggttc 103689 Query: 198 atttgttgttgcttcaactgctggttattgtgttggaaaccttcaaattgaagaatcata 257 |||||||||||||| |||||||| ||||||||||| || || | |||||||| |||| Sbjct: 103690 ttttgttgttgcttctactgctggctattgtgttggtaatctccgaattgaaggtgcata 103749 Query: 258 tgcaccttgggaggattcatccttttcatacccatcaaacttagcttccccgttgcagat 317 |||||| ||||||||| ||||||||||||| | || || || || ||||| ||||| || Sbjct: 103750 tgcaccctgggaggatccatccttttcatatctgtcgaatttggcctcccctttgcaaat 103809 Query: 318 tcttattgatgctagcgacggtgcttctgactatgggaacaagtttggcgagcctttaat 377 |||||||||||||||||| || |||||||||||||||||||||||||| || ||| |||| Sbjct: 103810 tcttattgatgctagcgatggcgcttctgactatgggaacaagtttggtgaacctctaat 103869 Query: 378 tcagggatttacaagaaattttgg 401 |||||||||||| ||||||||||| Sbjct: 103870 tcagggatttactagaaattttgg 103893
>ref|NM_190202.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4065 Score = 349 bits (176), Expect = 5e-93 Identities = 332/384 (86%) Strand = Plus / Plus Query: 18 aaatcatctacgcccagcactaccaggttccacttcaccactatcccttatgatgcgtga 77 |||||| || |||||| || | ||||| |||||||||||| |||| ||||||||||||| Sbjct: 936 aaatcagctgcgcccaacaattccaggctccacttcaccattatctgttatgatgcgtga 995 Query: 78 actaggcattctgttcacggcagaaacccataattttccatgtgccgtggcaccctaccc 137 || | ||| | ||||| |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 996 gcttgatattttattcacagcagaaacccataattttccatgtgctgtggcaccttaccc 1055 Query: 138 aggagctgaaacaggtgcaggtggccgcataagggacacacatgccactggaaagggctc 197 ||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||| || Sbjct: 1056 aggagctgagacaggtgcaggtggtcgcataagagacacacatgccaccggaaagggttc 1115 Query: 198 atttgttgttgcttcaactgctggttattgtgttggaaaccttcaaattgaagaatcata 257 |||||||||||||| |||||||| ||||||||||| || || | ||| |||| ||||| Sbjct: 1116 ttttgttgttgcttctactgctggctattgtgttggtaatctccgaatggaaggttcata 1175 Query: 258 tgcaccttgggaggattcatccttttcatacccatcaaacttagcttccccgttgcagat 317 |||||| ||||||||| ||||||||||||| || || || || || ||||| ||||| || Sbjct: 1176 tgcaccctgggaggatccatccttttcatatccgtcgaatttggcctcccctttgcaaat 1235 Query: 318 tcttattgatgctagcgacggtgcttctgactatgggaacaagtttggcgagcctttaat 377 ||| ||||||||||||| |||||||||||||||||||| |||||||| || ||| |||| Sbjct: 1236 tctggttgatgctagcgatggtgcttctgactatgggaataagtttggtgaacctctaat 1295 Query: 378 tcagggatttacaagaaattttgg 401 |||||| ||||| ||||||||||| Sbjct: 1296 tcagggctttactagaaattttgg 1319
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 349 bits (176), Expect = 5e-93 Identities = 332/384 (86%) Strand = Plus / Minus Query: 18 aaatcatctacgcccagcactaccaggttccacttcaccactatcccttatgatgcgtga 77 |||||| || |||||| || | ||||| |||||||||||| |||| ||||||||||||| Sbjct: 38615883 aaatcagctgcgcccaacaattccaggctccacttcaccattatctgttatgatgcgtga 38615824 Query: 78 actaggcattctgttcacggcagaaacccataattttccatgtgccgtggcaccctaccc 137 || | ||| | ||||| |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 38615823 gcttgatattttattcacagcagaaacccataattttccatgtgctgtggcaccttaccc 38615764 Query: 138 aggagctgaaacaggtgcaggtggccgcataagggacacacatgccactggaaagggctc 197 ||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||| || Sbjct: 38615763 aggagctgagacaggtgcaggtggtcgcataagagacacacatgccaccggaaagggttc 38615704 Query: 198 atttgttgttgcttcaactgctggttattgtgttggaaaccttcaaattgaagaatcata 257 |||||||||||||| |||||||| ||||||||||| || || | ||| |||| ||||| Sbjct: 38615703 ttttgttgttgcttctactgctggctattgtgttggtaatctccgaatggaaggttcata 38615644 Query: 258 tgcaccttgggaggattcatccttttcatacccatcaaacttagcttccccgttgcagat 317 |||||| ||||||||| ||||||||||||| || || || || || ||||| ||||| || Sbjct: 38615643 tgcaccctgggaggatccatccttttcatatccgtcgaatttggcctcccctttgcaaat 38615584 Query: 318 tcttattgatgctagcgacggtgcttctgactatgggaacaagtttggcgagcctttaat 377 ||| ||||||||||||| |||||||||||||||||||| |||||||| || ||| |||| Sbjct: 38615583 tctggttgatgctagcgatggtgcttctgactatgggaataagtttggtgaacctctaat 38615524 Query: 378 tcagggatttacaagaaattttgg 401 |||||| ||||| ||||||||||| Sbjct: 38615523 tcagggctttactagaaattttgg 38615500
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 349 bits (176), Expect = 5e-93 Identities = 332/384 (86%) Strand = Plus / Minus Query: 18 aaatcatctacgcccagcactaccaggttccacttcaccactatcccttatgatgcgtga 77 |||||| || |||||| || | ||||| |||||||||||| |||| ||||||||||||| Sbjct: 136564 aaatcagctgcgcccaacaattccaggctccacttcaccattatctgttatgatgcgtga 136505 Query: 78 actaggcattctgttcacggcagaaacccataattttccatgtgccgtggcaccctaccc 137 || | ||| | ||||| |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 136504 gcttgatattttattcacagcagaaacccataattttccatgtgctgtggcaccttaccc 136445 Query: 138 aggagctgaaacaggtgcaggtggccgcataagggacacacatgccactggaaagggctc 197 ||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||| || Sbjct: 136444 aggagctgagacaggtgcaggtggtcgcataagagacacacatgccaccggaaagggttc 136385 Query: 198 atttgttgttgcttcaactgctggttattgtgttggaaaccttcaaattgaagaatcata 257 |||||||||||||| |||||||| ||||||||||| || || | ||| |||| ||||| Sbjct: 136384 ttttgttgttgcttctactgctggctattgtgttggtaatctccgaatggaaggttcata 136325 Query: 258 tgcaccttgggaggattcatccttttcatacccatcaaacttagcttccccgttgcagat 317 |||||| ||||||||| ||||||||||||| || || || || || ||||| ||||| || Sbjct: 136324 tgcaccctgggaggatccatccttttcatatccgtcgaatttggcctcccctttgcaaat 136265 Query: 318 tcttattgatgctagcgacggtgcttctgactatgggaacaagtttggcgagcctttaat 377 ||| ||||||||||||| |||||||||||||||||||| |||||||| || ||| |||| Sbjct: 136264 tctggttgatgctagcgatggtgcttctgactatgggaataagtttggtgaacctctaat 136205 Query: 378 tcagggatttacaagaaattttgg 401 |||||| ||||| ||||||||||| Sbjct: 136204 tcagggctttactagaaattttgg 136181
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 349 bits (176), Expect = 5e-93 Identities = 332/384 (86%) Strand = Plus / Minus Query: 18 aaatcatctacgcccagcactaccaggttccacttcaccactatcccttatgatgcgtga 77 |||||| || |||||| || | ||||| |||||||||||| |||| ||||||||||||| Sbjct: 73856 aaatcagctgcgcccaacaattccaggctccacttcaccattatctgttatgatgcgtga 73797 Query: 78 actaggcattctgttcacggcagaaacccataattttccatgtgccgtggcaccctaccc 137 || | ||| | ||||| |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 73796 gcttgatattttattcacagcagaaacccataattttccatgtgctgtggcaccttaccc 73737 Query: 138 aggagctgaaacaggtgcaggtggccgcataagggacacacatgccactggaaagggctc 197 ||||||||| |||||||||||||| |||||||| |||||||||||||| |||||||| || Sbjct: 73736 aggagctgagacaggtgcaggtggtcgcataagagacacacatgccaccggaaagggttc 73677 Query: 198 atttgttgttgcttcaactgctggttattgtgttggaaaccttcaaattgaagaatcata 257 |||||||||||||| |||||||| ||||||||||| || || | ||| |||| ||||| Sbjct: 73676 ttttgttgttgcttctactgctggctattgtgttggtaatctccgaatggaaggttcata 73617 Query: 258 tgcaccttgggaggattcatccttttcatacccatcaaacttagcttccccgttgcagat 317 |||||| ||||||||| ||||||||||||| || || || || || ||||| ||||| || Sbjct: 73616 tgcaccctgggaggatccatccttttcatatccgtcgaatttggcctcccctttgcaaat 73557 Query: 318 tcttattgatgctagcgacggtgcttctgactatgggaacaagtttggcgagcctttaat 377 ||| ||||||||||||| |||||||||||||||||||| |||||||| || ||| |||| Sbjct: 73556 tctggttgatgctagcgatggtgcttctgactatgggaataagtttggtgaacctctaat 73497 Query: 378 tcagggatttacaagaaattttgg 401 |||||| ||||| ||||||||||| Sbjct: 73496 tcagggctttactagaaattttgg 73473
>gb|AY069939.1| Vigna unguiculata formylglycinamide ribonucleotide amidotransferase (pur4) mRNA, partial cds Length = 4115 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 100 gaaacccataattttccatgtgccgtggcaccctacccaggagctgaaacaggtgcaggt 159 ||||| ||||||||||||||||| |||||||| || || || || || || |||||||| Sbjct: 823 gaaacgcataattttccatgtgcagtggcaccttatcctggggcagagacgggtgcagga 882 Query: 160 ggccgcataagggacacacatgccactggaaagggctcatttgt 203 || ||||| ||||| |||||||| ||||||| ||| || ||||| Sbjct: 883 ggtcgcattagggatacacatgctactggaaggggttcctttgt 926
>ref|NM_106086.2| Arabidopsis thaliana catalytic AT1G74260 mRNA, complete cds Length = 4336 Score = 65.9 bits (33), Expect = 1e-07 Identities = 231/297 (77%) Strand = Plus / Plus Query: 89 tgttcacggcagaaacccataattttccatgtgccgtggcaccctacccaggagctgaaa 148 ||||||| || |||||||||||||| || ||||| ||||| || || || || ||||| | Sbjct: 1109 tgttcactgctgaaacccataatttcccttgtgctgtggctccttatcctggtgctgaga 1168 Query: 149 caggtgcaggtggccgcataagggacacacatgccactggaaagggctcatttgttgttg 208 ||||||| || || || || || || |||||||| || |||| || || ||||| |||| Sbjct: 1169 caggtgctggaggtcgaatcagagatacacatgcaacaggaagaggttcttttgtggttg 1228 Query: 209 cttcaactgctggttattgtgttggaaaccttcaaattgaagaatcatatgcaccttggg 268 | || ||| ||||||| |||||||| |||||| | || || | ||| ||||| || |||| Sbjct: 1229 catccacttctggttactgtgttggtaaccttaacatggagggatcttatgctccatggg 1288 Query: 269 aggattcatccttttcatacccatcaaacttagcttccccgttgcagattcttattgatg 328 | || || || || ||||||||| ||| |||| || || | ||||| || || || | Sbjct: 1289 aagactcgtctttccaatacccatcgaacctagcatcacctctacagatactcatcgacg 1348 Query: 329 ctagcgacggtgcttctgactatgggaacaagtttggcgagcctttaattcagggat 385 |||| | ||||| ||||||||||| ||||| ||||| ||||| | |||||||||| Sbjct: 1349 ctagtaatggtgcatctgactatggtaacaaatttggagagcccatgattcagggat 1405
>gb|AC020579.5|AC020579 Arabidopsis thaliana chromosome 1 BAC F1O17 genomic sequence, complete sequence Length = 50821 Score = 65.9 bits (33), Expect = 1e-07 Identities = 231/297 (77%) Strand = Plus / Plus Query: 89 tgttcacggcagaaacccataattttccatgtgccgtggcaccctacccaggagctgaaa 148 ||||||| || |||||||||||||| || ||||| ||||| || || || || ||||| | Sbjct: 26799 tgttcactgctgaaacccataatttcccttgtgctgtggctccttatcctggtgctgaga 26858 Query: 149 caggtgcaggtggccgcataagggacacacatgccactggaaagggctcatttgttgttg 208 ||||||| || || || || || || |||||||| || |||| || || ||||| |||| Sbjct: 26859 caggtgctggaggtcgaatcagagatacacatgcaacaggaagaggttcttttgtggttg 26918 Query: 209 cttcaactgctggttattgtgttggaaaccttcaaattgaagaatcatatgcaccttggg 268 | || ||| ||||||| |||||||| |||||| | || || | ||| ||||| || |||| Sbjct: 26919 catccacttctggttactgtgttggtaaccttaacatggagggatcttatgctccatggg 26978 Query: 269 aggattcatccttttcatacccatcaaacttagcttccccgttgcagattcttattgatg 328 | || || || || ||||||||| ||| |||| || || | ||||| || || || | Sbjct: 26979 aagactcgtctttccaatacccatcgaacctagcatcacctctacagatactcatcgacg 27038 Query: 329 ctagcgacggtgcttctgactatgggaacaagtttggcgagcctttaattcagggat 385 |||| | ||||| ||||||||||| ||||| ||||| ||||| | |||||||||| Sbjct: 27039 ctagtaatggtgcatctgactatggtaacaaatttggagagcccatgattcagggat 27095
>gb|AY178839.1| Glycine max phosphoribosylformylglycinamidine synthase (FGAM2) gene, complete cds Length = 6450 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 100 gaaacccataattttccatgtgccgtggcaccctacccaggagctgaaacaggtgcaggt 159 ||||| ||||||||||||||||| |||||||| || || || || || ||||||||||| Sbjct: 3378 gaaacacataattttccatgtgcagtggcaccttatcctggtgcagagacaggtgcagga 3437 Query: 160 ggccgcataagggacacacatgccactggaaagggctcatttgt 203 || || || ||||| |||||||| || |||| ||| || ||||| Sbjct: 3438 ggtcgtattagggatacacatgctacaggaagggggtcctttgt 3481 Score = 48.1 bits (24), Expect = 0.023 Identities = 93/116 (80%) Strand = Plus / Plus Query: 256 tatgcaccttgggaggattcatccttttcatacccatcaaacttagcttccccgttgcag 315 ||||| || ||||| ||||| |||||| | || |||||||| || || | || || ||| Sbjct: 3534 tatgctccatgggaagattcctcctttacttatccatcaaatttggcaccacctttacag 3593 Query: 316 attcttattgatgctagcgacggtgcttctgactatgggaacaagtttggcgagcc 371 ||||| || ||| |||| | ||||| ||||||||||||||||| ||||| ||||| Sbjct: 3594 attctgatagattctagtaatggtgcatctgactatgggaacaaatttggagagcc 3649
>ref|XM_320948.2| Anopheles gambiae str. PEST ENSANGP00000017639 (ENSANGG00000015150), partial mRNA Length = 4186 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 331 agcgacggtgcttctgactatgggaacaagtttggcgagcc 371 ||||||||||| || || ||||| ||||||||||||||||| Sbjct: 1280 agcgacggtgcgtcggattatggcaacaagtttggcgagcc 1320
>gb|AY178840.1| Glycine max FGAM synthase (FGAM1) gene, complete cds Length = 5684 Score = 48.1 bits (24), Expect = 0.023 Identities = 66/80 (82%) Strand = Plus / Plus Query: 100 gaaacccataattttccatgtgccgtggcaccctacccaggagctgaaacaggtgcaggt 159 ||||| |||||||||||||| || |||||||| || || || || || || |||||||| Sbjct: 3442 gaaacacataattttccatgcgcagtggcaccttatcctggtgcagagacgggtgcagga 3501 Query: 160 ggccgcataagggacacaca 179 || ||||| ||||| ||||| Sbjct: 3502 ggtcgcattagggatacaca 3521 Score = 46.1 bits (23), Expect = 0.092 Identities = 32/35 (91%) Strand = Plus / Plus Query: 337 ggtgcttctgactatgggaacaagtttggcgagcc 371 ||||| ||||||||||||||||| ||||| ||||| Sbjct: 3679 ggtgcatctgactatgggaacaaatttggagagcc 3713
>ref|XM_511854.1| PREDICTED: Pan troglodytes similar to KIAA0361 (LOC455093), mRNA Length = 2565 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gcttctgactatgggaacaagtttgg 365 |||||||||||||| ||||||||||| Sbjct: 1258 gcttctgactatggcaacaagtttgg 1283
>ref|NM_012393.1| Homo sapiens phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) (PFAS), mRNA Length = 5338 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gcttctgactatgggaacaagtttgg 365 |||||||||||||| ||||||||||| Sbjct: 1265 gcttctgactatggcaacaagtttgg 1290
>emb|CR861271.1| Pongo pygmaeus mRNA; cDNA DKFZp459K203 (from clone DKFZp459K203) Length = 4291 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gcttctgactatgggaacaagtttgg 365 |||||||||||||| ||||||||||| Sbjct: 1271 gcttctgactatggcaacaagtttgg 1296
>gb|AC008696.6|AC008696 Homo sapiens chromosome 5 clone CTB-70D19, complete sequence Length = 155666 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 caggagctgaaacaggtgcagg 158 |||||||||||||||||||||| Sbjct: 133494 caggagctgaaacaggtgcagg 133515
>gb|AC135178.13| Homo sapiens chromosome 17, clone RP11-849F2, complete sequence Length = 188340 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 340 gcttctgactatgggaacaagtttgg 365 |||||||||||||| ||||||||||| Sbjct: 126687 gcttctgactatggcaacaagtttgg 126662
>dbj|AB002359.1| Human mRNA for KIAA0361 gene, KIAA0361 protein Length = 5338 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 gcttctgactatgggaacaagtttgg 365 |||||||||||||| ||||||||||| Sbjct: 1265 gcttctgactatggcaacaagtttgg 1290
>emb|AL591222.2|HS378I6 Homo sapiens chromosome 9 BAC RP11-378I6, complete sequence Length = 147211 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 38 taccaggttccacttcaccact 59 |||||||||||||||||||||| Sbjct: 107810 taccaggttccacttcaccact 107831
>ref|XM_992193.1| PREDICTED: Mus musculus phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) (Pfas), mRNA Length = 4777 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 343 tctgactatgggaacaagtttggcgagcc 371 ||||||||||| ||||||||||| ||||| Sbjct: 1255 tctgactatggcaacaagtttggagagcc 1283
>ref|XM_908501.2| PREDICTED: Mus musculus phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) (Pfas), mRNA Length = 4777 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 343 tctgactatgggaacaagtttggcgagcc 371 ||||||||||| ||||||||||| ||||| Sbjct: 1255 tctgactatggcaacaagtttggagagcc 1283
>ref|XM_111232.7| PREDICTED: Mus musculus phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) (Pfas), mRNA Length = 4777 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 343 tctgactatgggaacaagtttggcgagcc 371 ||||||||||| ||||||||||| ||||| Sbjct: 1255 tctgactatggcaacaagtttggagagcc 1283
>emb|AL645902.6| Mouse DNA sequence from clone RP23-19I2 on chromosome 11 Contains the gene for the likely ortholog of H. sapiens phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) (PFAS), the gene for a novel protein (1500010J02Rik), the Aurkb gene for aurora kinase B, two genes for novel proteins (2310047M10Rik and 1110004B13Rik), a guanine nucleotide binding protein (G protein) gamma 5 subunit (Gng5) pseudogene and three CpG islands, complete sequence Length = 100678 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 343 tctgactatgggaacaagtttggcgagcc 371 ||||||||||| ||||||||||| ||||| Sbjct: 13193 tctgactatggcaacaagtttggagagcc 13165
>dbj|AK139115.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730032G07 product:Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3) (FGAM synthase) (FGAMS) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase) homolog [Homo sapiens], full insert sequence Length = 2130 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 343 tctgactatgggaacaagtttggcgagcc 371 ||||||||||| ||||||||||| ||||| Sbjct: 1253 tctgactatggcaacaagtttggagagcc 1281
>gb|AC122398.2| Mus musculus BAC clone RP24-90M8 from chromosome 18, complete sequence Length = 215758 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 aattgaagaatcatatgcac 262 |||||||||||||||||||| Sbjct: 176618 aattgaagaatcatatgcac 176599
>gb|AC127021.25| Medicago truncatula clone mth2-5e5, complete sequence Length = 139116 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaaccttcaaattgaagaat 253 |||||||||||||||||||| Sbjct: 88700 aaaccttcaaattgaagaat 88719
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 5.7 Identities = 44/52 (84%) Strand = Plus / Plus Query: 335 acggtgcttctgactatgggaacaagtttggcgagcctttaattcagggatt 386 ||||||||||||| ||||| || ||||| ||||| || | ||||||||||| Sbjct: 777106 acggtgcttctgattatggtaataagttcggcgaacccctgattcagggatt 777157
>gb|AC158620.6| Mus musculus 10 BAC RP23-288C18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 179342 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 taaaagggactcttgtaaat 21 |||||||||||||||||||| Sbjct: 48532 taaaagggactcttgtaaat 48513
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 atttgttgttgcttcaactgctggttat 225 |||||||| | ||||||||||||||||| Sbjct: 6220584 atttgttgattcttcaactgctggttat 6220611
>gb|AC106736.4| Homo sapiens chromosome 16 clone CTD-2520I13, complete sequence Length = 152212 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ttcaccactatcccttatga 70 |||||||||||||||||||| Sbjct: 7112 ttcaccactatcccttatga 7131
>dbj|AK069445.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020G11, full insert sequence Length = 2307 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 198 atttgttgttgcttcaactgctggttat 225 |||||||| | ||||||||||||||||| Sbjct: 1671 atttgttgattcttcaactgctggttat 1644
>dbj|AK065570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N16, full insert sequence Length = 2009 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 198 atttgttgttgcttcaactgctggttat 225 |||||||| | ||||||||||||||||| Sbjct: 1271 atttgttgattcttcaactgctggttat 1244
>emb|BX511238.6| Zebrafish DNA sequence from clone CH211-106F13 in linkage group 4, complete sequence Length = 65784 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 aaacccataattttccatgt 120 |||||||||||||||||||| Sbjct: 32970 aaacccataattttccatgt 32951
>emb|AL606997.3|OSJN00115 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0059D20, complete sequence Length = 147108 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 atttgttgttgcttcaactgctggttat 225 |||||||| | ||||||||||||||||| Sbjct: 116369 atttgttgattcttcaactgctggttat 116396
>emb|AL935319.8| Zebrafish DNA sequence from clone DKEY-56L2 in linkage group 18, complete sequence Length = 106806 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 aaacccataattttccatgt 120 |||||||||||||||||||| Sbjct: 50757 aaacccataattttccatgt 50776 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,634,579 Number of Sequences: 3902068 Number of extensions: 3634579 Number of successful extensions: 66213 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66099 Number of HSP's gapped (non-prelim): 112 length of query: 422 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 400 effective length of database: 17,147,199,772 effective search space: 6858879908800 effective search space used: 6858879908800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)