Clone Name | bastl56b01 |
---|---|
Clone Library Name | barley_pub |
>gb|AY104879.1| Zea mays PCO135342 mRNA sequence Length = 916 Score = 434 bits (219), Expect = e-118 Identities = 303/331 (91%) Strand = Plus / Plus Query: 99 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 158 |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| Sbjct: 87 ccatgacgttcaagcggaggaacggcggacgcaacaagcacgggcgcggccacgtcaagt 146 Query: 159 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 218 |||| |||||||||||||||||||||||||| || ||||| |||||||||||||| |||| Sbjct: 147 acatacgctgctccaactgcgccaagtgctgtccaaaggataaggctatcaagcggttct 206 Query: 219 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 278 |||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||| Sbjct: 207 tggtgaggaacattgttgagcaggctgctgtgagggacgtgcaggaggcttgtgtgcatg 266 Query: 279 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 338 ||||||||||||| ||||| |||| || ||||| || |||||||| || || || |||| Sbjct: 267 atggatatgttcttcccaaattgtacgcaaaggttcatcactgtgtctcatgcgcaatcc 326 Query: 339 atgctcacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagc 398 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 327 atgcgcacattgtccgtgtccgctctcgtgagaacaggaggaaccgtgagcccccgcagc 386 Query: 399 gtttcaggcgcagggacgacggccctaggcc 429 ||||||||||| |||| || ||||| ||||| Sbjct: 387 gtttcaggcgccgggatgatggcccaaggcc 417
>dbj|AK061933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D01, full insert sequence Length = 664 Score = 270 bits (136), Expect = 4e-69 Identities = 271/316 (85%) Strand = Plus / Plus Query: 99 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 158 ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 50 ccatgaccttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagt 109 Query: 159 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 218 |||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 110 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggccatcaagaggttcc 169 Query: 219 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 278 |||||||||||| || |||||||| || | || ||||| |||||||| || || |||| Sbjct: 170 aggtgaggaacatcgtcgagcaggcggccatcagggatgtccaggaggcgtgcgtccatg 229 Query: 279 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 338 | ||||| || ||||| |||||||| |||||||| || ||||| || || || ||||||| Sbjct: 230 acggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatcc 289 Query: 339 atgctcacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagc 398 | || ||||| ||||||||||||||||| |||||| | ||| |||| ||| ||| || Sbjct: 290 acgcccacatcgtccgtgtccgctcccgcgagaaccgcagggaccgcaggccgccggaga 349 Query: 399 gtttcaggcgcaggga 414 | |||||||||||||| Sbjct: 350 ggttcaggcgcaggga 365
>dbj|AK119797.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-H04, full insert sequence Length = 616 Score = 270 bits (136), Expect = 4e-69 Identities = 271/316 (85%) Strand = Plus / Plus Query: 99 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 158 ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 50 ccatgaccttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagt 109 Query: 159 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 218 |||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 110 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggccatcaagaggttcc 169 Query: 219 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 278 |||||||||||| || |||||||| || | || ||||| |||||||| || || |||| Sbjct: 170 aggtgaggaacatcgtcgagcaggcggccatcagggatgtccaggaggcgtgcgtccatg 229 Query: 279 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 338 | ||||| || ||||| |||||||| |||||||| || ||||| || || || ||||||| Sbjct: 230 acggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatcc 289 Query: 339 atgctcacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagc 398 | || ||||| ||||||||||||||||| |||||| | ||| |||| ||| ||| || Sbjct: 290 acgcccacatcgtccgtgtccgctcccgcgagaaccgcagggaccgcaggccgccggaga 349 Query: 399 gtttcaggcgcaggga 414 | |||||||||||||| Sbjct: 350 ggttcaggcgcaggga 365
>dbj|AK119683.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-A02, full insert sequence Length = 641 Score = 270 bits (136), Expect = 4e-69 Identities = 271/316 (85%) Strand = Plus / Plus Query: 99 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 158 ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 51 ccatgaccttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagt 110 Query: 159 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 218 |||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 111 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggccatcaagaggttcc 170 Query: 219 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 278 |||||||||||| || |||||||| || | || ||||| |||||||| || || |||| Sbjct: 171 aggtgaggaacatcgtcgagcaggcggccatcagggatgtccaggaggcgtgcgtccatg 230 Query: 279 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 338 | ||||| || ||||| |||||||| |||||||| || ||||| || || || ||||||| Sbjct: 231 acggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatcc 290 Query: 339 atgctcacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagc 398 | || ||||| ||||||||||||||||| |||||| | ||| |||| ||| ||| || Sbjct: 291 acgcccacatcgtccgtgtccgctcccgcgagaaccgcagggaccgcaggccgccggaga 350 Query: 399 gtttcaggcgcaggga 414 | |||||||||||||| Sbjct: 351 ggttcaggcgcaggga 366
>dbj|AK098982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091A22, full insert sequence Length = 620 Score = 270 bits (136), Expect = 4e-69 Identities = 271/316 (85%) Strand = Plus / Plus Query: 99 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 158 ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 52 ccatgaccttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagt 111 Query: 159 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 218 |||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 112 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggccatcaagaggttcc 171 Query: 219 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 278 |||||||||||| || |||||||| || | || ||||| |||||||| || || |||| Sbjct: 172 aggtgaggaacatcgtcgagcaggcggccatcagggatgtccaggaggcgtgcgtccatg 231 Query: 279 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 338 | ||||| || ||||| |||||||| |||||||| || ||||| || || || ||||||| Sbjct: 232 acggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatcc 291 Query: 339 atgctcacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagc 398 | || ||||| ||||||||||||||||| |||||| | ||| |||| ||| ||| || Sbjct: 292 acgcccacatcgtccgtgtccgctcccgcgagaaccgcagggaccgcaggccgccggaga 351 Query: 399 gtttcaggcgcaggga 414 | |||||||||||||| Sbjct: 352 ggttcaggcgcaggga 367
>ref|XM_475416.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 585 Score = 262 bits (132), Expect = 9e-67 Identities = 264/308 (85%) Strand = Plus / Plus Query: 107 ttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgc 166 |||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 181 ttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagtacatccgc 240 Query: 167 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 226 |||||||||||||||||||||||||||||||||||||| |||||| | ||| ||||||| Sbjct: 241 tgctccaactgcgccaagtgctgccccaaggacaaggccatcaagaggttccaggtgagg 300 Query: 227 aacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatgatggatat 286 ||||| || |||||||| || | || ||||| |||||||| || || ||||| ||||| Sbjct: 301 aacatcgtcgagcaggcggccatcagggatgtccaggaggcgtgcgtccatgacggatac 360 Query: 287 gttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatccatgctcac 346 || ||||| |||||||| |||||||| || ||||| || || || |||||||| || ||| Sbjct: 361 gtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatccacgcccac 420 Query: 347 attgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagcgtttcagg 406 || ||||||||||||||||| |||||| | ||| |||| ||| ||| || | |||||| Sbjct: 421 atcgtccgtgtccgctcccgcgagaaccgcagggaccgcaggccgccggagaggttcagg 480 Query: 407 cgcaggga 414 |||||||| Sbjct: 481 cgcaggga 488
>dbj|AK121584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037F24, full insert sequence Length = 947 Score = 262 bits (132), Expect = 9e-67 Identities = 270/316 (85%) Strand = Plus / Plus Query: 99 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 158 ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 51 ccatgaccttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagt 110 Query: 159 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 218 |||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| Sbjct: 111 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggccatcaagaggttcc 170 Query: 219 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 278 |||||||||||| || |||||||| || | || ||||| |||||||| || || |||| Sbjct: 171 aggtgaggaacatcgtcgagcaggcggccatcagggatgtccaggaggcgtgcgtccatg 230 Query: 279 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 338 | ||||| || ||||| |||||||| |||||||| || ||||| || || || ||||||| Sbjct: 231 acggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatcc 290 Query: 339 atgctcacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagc 398 | || ||||| |||||||||||||||| |||||| | ||| |||| ||| ||| || Sbjct: 291 acgcccacatcatccgtgtccgctcccgcgagaaccgcagggaccgcaggccgccggaga 350 Query: 399 gtttcaggcgcaggga 414 | |||||||||||||| Sbjct: 351 ggttcaggcgcaggga 366
>dbj|AK119693.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-C03, full insert sequence Length = 618 Score = 254 bits (128), Expect = 2e-64 Identities = 269/316 (85%) Strand = Plus / Plus Query: 99 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 158 ||||||| |||||||| ||||||||||||||||||| ||| |||||||||||||| |||| Sbjct: 50 ccatgaccttcaagcgcaggaacggcggccgcaacaggcatggccgcggccatgtgaagt 109 Query: 159 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 218 |||||||||||||||||||||||||||||||||||||||||||||| | |||| | ||| Sbjct: 110 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggccaccaagaggttcc 169 Query: 219 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 278 |||||||||||| || |||||||| || | || ||||| |||||||| || || |||| Sbjct: 170 aggtgaggaacatcgtcgagcaggcggccatcagggatgtccaggaggcgtgcgtccatg 229 Query: 279 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 338 | ||||| || ||||| |||||||| |||||||| || ||||| || || || ||||||| Sbjct: 230 acggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatcc 289 Query: 339 atgctcacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagc 398 | || ||||| ||||||||||||||||| |||||| | ||| |||| ||| ||| || Sbjct: 290 acgcccacatcgtccgtgtccgctcccgcgagaaccgcagggaccgcaggccgccggaga 349 Query: 399 gtttcaggcgcaggga 414 | |||||||||||||| Sbjct: 350 ggttcaggcgcaggga 365
>dbj|D38011.1|RICRPS31 Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein S31, complete cds Length = 552 Score = 252 bits (127), Expect = 8e-64 Identities = 229/263 (87%) Strand = Plus / Plus Query: 122 ggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgcc 181 |||||||||| ||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct: 72 ggcggccgcatcaagcacggtcgcgggcacgtcaagtacatccgctgctccaactgcgcc 131 Query: 182 aagtgctgccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggagcag 241 |||||||| |||||||||||||| |||||| | || |||||||||||| ||||||||| Sbjct: 132 aagtgctgtcccaaggacaaggcgatcaagaggtttcaggtgaggaacatcgtggagcag 191 Query: 242 gctgctgtgagagatgtgcaggaggcttgtgtgcatgatggatatgttctccccaagctg 301 | || | || || || ||||||| || ||||| |||||||| |||||||||||||| Sbjct: 192 gtcgccatcagggacgtccaggaggggtgcgtgcacgatggatacgttctccccaagctt 251 Query: 302 tatgccaaggtgcaccactgtgtttcttgtgccatccatgctcacattgtccgtgtccgc 361 || ||||||||||| |||||||| || ||||| |||||||||||||| |||||||||||| Sbjct: 252 tacgccaaggtgcatcactgtgtgtcctgtgcaatccatgctcacatcgtccgtgtccgc 311 Query: 362 tcccgtgagaacaggaggaaccg 384 |||||||||||| ||||| |||| Sbjct: 312 tcccgtgagaaccggagggaccg 334
>gb|AY106241.1| Zea mays PCO086893 mRNA sequence Length = 791 Score = 206 bits (104), Expect = 4e-50 Identities = 248/296 (83%) Strand = Plus / Plus Query: 119 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 |||||||||||||||||||| |||||||| || |||||||||||||| ||||| |||||| Sbjct: 140 aacggcggccgcaacaagcatggccgcggtcacgtcaagtacatccggtgctcaaactgc 199 Query: 179 gccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggag 238 |||||||||||||||||||||||||| |||||| | || |||||||||||| ||||| Sbjct: 200 gccaagtgctgccccaaggacaaggcgatcaagaggtttcaggtgaggaacatcgtggaa 259 Query: 239 caggctgctgtgagagatgtgcaggaggcttgtgtgcatgatggatatgttctccccaag 298 ||||| || | || || || ||||| || || || ||||||| || || ||||| ||| Sbjct: 260 caggcggccatcagggacgtccaggaagcatgcgtctatgatggctacgtcctcccgaag 319 Query: 299 ctgtatgccaaggtgcaccactgtgtttcttgtgccatccatgctcacattgtccgtgtc 358 ||||| ||||||||||||||||| || || || || ||||| |||||||| ||||| ||| Sbjct: 320 ctgtacgccaaggtgcaccactgcgtctcgtgcgcgatccacgctcacatcgtccgcgtc 379 Query: 359 cgctcccgtgagaacaggaggaaccgtgagcccccgcagcgtttcaggcgcaggga 414 || ||||||||||| | ||| |||| |||| ||| |||| |||||||||||||| Sbjct: 380 cgatcccgtgagaagcgcagggaccgcaagccgccggagcgcttcaggcgcaggga 435
>gb|BT016216.1| Zea mays clone Contig49 mRNA sequence Length = 749 Score = 178 bits (90), Expect = 1e-41 Identities = 237/286 (82%) Strand = Plus / Minus Query: 129 gcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgccaagtgct 188 |||||||||| |||||||| || |||||||||||||| ||||| |||||||||||||||| Sbjct: 749 gcaacaagcatggccgcggtcacgtcaagtacatccggtgctcaaactgcgccaagtgct 690 Query: 189 gccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctg 248 |||||||||||||||| |||||| | || |||||||||||| ||||| ||||| || Sbjct: 689 gccccaaggacaaggcgatcaagaggtttcaggtgaggaacatcgtggaacaggcggcca 630 Query: 249 tgagagatgtgcaggaggcttgtgtgcatgatggatatgttctccccaagctgtatgcca 308 | || || || ||||| || || || ||||||| | || ||||| |||||||| |||| Sbjct: 629 tcagggacgtccaggaagcatgcgtctatgatggttccgtcctcccgaagctgtacgcca 570 Query: 309 aggtgcaccactgtgtttcttgtgccatccatgctcacattgtccgtgtccgctcccgtg 368 ||||||||||||| || || || || ||||| |||||||| ||||| ||||| ||||||| Sbjct: 569 aggtgcaccactgcgtctcgtgcgcgatccacgctcacatcgtccgcgtccgatcccgtg 510 Query: 369 agaacaggaggaaccgtgagcccccgcagcgtttcaggcgcaggga 414 |||| | ||| |||| |||| ||| |||| |||||||||||||| Sbjct: 509 agaagcgcagggaccgcaagccgccggagcgcttcaggcgcaggga 464
>gb|AF457935.1| Zea mays clone cho1c.pk003.k1, mRNA sequence Length = 554 Score = 174 bits (88), Expect = 2e-40 Identities = 217/261 (83%) Strand = Plus / Plus Query: 99 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagt 158 ||||||| |||||||| | |||||||||||||||||||| |||||||| || ||||||| Sbjct: 27 ccatgaccttcaagcgccgcaacggcggccgcaacaagcatggccgcggtcacgtcaagt 86 Query: 159 acatccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttct 218 ||||||| ||||| |||||||||||||||||||||||||||||||| |||||| | || Sbjct: 87 acatccggtgctcaaactgcgccaagtgctgccccaaggacaaggcgatcaagaggtttc 146 Query: 219 tggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgtgcatg 278 |||||||||||| ||||| ||||| || | || || || ||||| || || || || Sbjct: 147 aggtgaggaacatcgtggaacaggcggccatcagggacgtccaggaagcatgcgtctatn 206 Query: 279 atggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcc 338 |||| || || ||||| |||||||| ||||||||||||||||| || || || || || | Sbjct: 207 atggntacgtcctcccgaagctgtacgccaaggtgcaccactgcgtctcgtgcgcgatnc 266 Query: 339 atgctcacattgtccgtgtcc 359 | |||||||| ||||| |||| Sbjct: 267 acgctcacatcgtccgcgtcc 287
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 157 bits (79), Expect = 4e-35 Identities = 88/91 (96%) Strand = Plus / Minus Query: 107 ttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgc 166 |||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 27324 ttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagtacatccgc 27265 Query: 167 tgctccaactgcgccaagtgctgccccaagg 197 ||||||||||||||||||||||||||||||| Sbjct: 27264 tgctccaactgcgccaagtgctgccccaagg 27234 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 281 ggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatccat 340 ||||| || ||||| |||||||| |||||||| || ||||| || || || |||||||| Sbjct: 26932 ggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatccac 26873 Query: 341 gctcacattgtccgtgtccgctcccgtgagaac 373 || ||||| ||||||||||||||||| |||||| Sbjct: 26872 gcccacatcgtccgtgtccgctcccgcgagaac 26840 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Minus Query: 195 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggc 243 |||||||||| |||||| | ||| |||||||||||| || |||||||| Sbjct: 27113 aggacaaggccatcaagaggttccaggtgaggaacatcgtcgagcaggc 27065
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 157 bits (79), Expect = 4e-35 Identities = 88/91 (96%) Strand = Plus / Minus Query: 107 ttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgc 166 |||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 23341788 ttcaagcgcaggaacggcggccgcaacaagcatggccgcggccatgtgaagtacatccgc 23341729 Query: 167 tgctccaactgcgccaagtgctgccccaagg 197 ||||||||||||||||||||||||||||||| Sbjct: 23341728 tgctccaactgcgccaagtgctgccccaagg 23341698 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Minus Query: 281 ggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatccat 340 ||||| || ||||| |||||||| |||||||| || ||||| || || || |||||||| Sbjct: 23341396 ggatacgtcctcccgaagctgtacgccaaggtccatcactgcgtctcctgcgccatccac 23341337 Query: 341 gctcacattgtccgtgtccgctcccgtgagaac 373 || ||||| ||||||||||||||||| |||||| Sbjct: 23341336 gcccacatcgtccgtgtccgctcccgcgagaac 23341304 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 ctgctccaactgcgccaagtg 186 ||||||||||||||||||||| Sbjct: 28291152 ctgctccaactgcgccaagtg 28291172 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Minus Query: 195 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggc 243 |||||||||| |||||| | ||| |||||||||||| || |||||||| Sbjct: 23341577 aggacaaggccatcaagaggttccaggtgaggaacatcgtcgagcaggc 23341529 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 gcaccactgtgtttcttgtg 332 |||||||||||||||||||| Sbjct: 25336627 gcaccactgtgtttcttgtg 25336608 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 gccgcgccgccgccgcaaac 25 |||||||||||||||||||| Sbjct: 18731452 gccgcgccgccgccgcaaac 18731433
>dbj|AK109021.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-B01, full insert sequence Length = 974 Score = 143 bits (72), Expect = 6e-31 Identities = 180/214 (84%), Gaps = 4/214 (1%) Strand = Plus / Plus Query: 196 ggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctgt-gagag 254 ||||||||||||||| ||||||||||||||||| ||||| ||||||||||| || ||| Sbjct: 187 ggacaaggctatcaaccgtttcttggtgaggaatattgttgagcaggctgcagtcttgag 246 Query: 255 atgtgcaggaggcttgtgtgcatgatggatatgttctccccaagctgtatgccaaggtgc 314 || |||| ||||||||||| |||||||| | ||||| || ||||||||||| ||||||| Sbjct: 247 atatgcaagaggcttgtgtacatgatggtcacgttcttcctaagctgtatgcaaaggtgc 306 Query: 315 accactgtgtttcttg---tgccatccatgctcacattgtccgtgtccgctcccgtgaga 371 | ||||| ||||| || ||| || ||||||||||||||| |||| ||||| | |||| Sbjct: 307 atcactgcgtttcatggaatgcaattcatgctcacattgtcagtgttcgctcttgcgaga 366 Query: 372 acaggaggaaccgtgagcccccgcagcgtttcag 405 |||||||||| |||||| ||||||| |||||| Sbjct: 367 acaggaggaattgtgagcttccgcagcatttcag 400 Score = 69.9 bits (35), Expect = 7e-09 Identities = 70/82 (85%), Gaps = 6/82 (7%) Strand = Plus / Plus Query: 99 ccatgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggc------catg 152 ||||||||| ||||||||||| ||||| ||||||||||||||||||||| || | Sbjct: 65 ccatgacgtggaagcggaggaatggcgggcgcaacaagcacggccgcggccgcggccacg 124 Query: 153 tcaagtacatccgctgctccaa 174 ||||||| |||||||||||||| Sbjct: 125 tcaagtagatccgctgctccaa 146
>gb|AF112440.1|AF112440 Pisum sativum ribosomal protein S26 (RPS26) mRNA, complete cds Length = 610 Score = 139 bits (70), Expect = 9e-30 Identities = 150/174 (86%), Gaps = 2/174 (1%) Strand = Plus / Plus Query: 101 atgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagtac 160 ||||| |||||||| ||||| || || || |||||||| ||||| ||||||||||||| | Sbjct: 32 atgactttcaagcgtaggaatggaggacgtaacaagcatggccgtggccatgtcaagttc 91 Query: 161 atccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcg-tttctt 219 ||||| ||||||||||||| || ||||| |||||||| ||||| |||||| | |||||| Sbjct: 92 atccgttgctccaactgcggaaaatgctgtcccaaggataaggcaatcaagagatttctt 151 Query: 220 ggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtgt 273 |||||||||||||| || ||||||||||| |||||||| ||||| |||||||| Sbjct: 152 -gtgaggaacattgttgaacaggctgctgttagagatgttcaggaagcttgtgt 204
>gb|BT013046.1| Lycopersicon esculentum clone 114301F, mRNA sequence Length = 637 Score = 135 bits (68), Expect = 1e-28 Identities = 146/172 (84%) Strand = Plus / Plus Query: 101 atgacgttcaagcggaggaacggcggccgcaacaagcacggccgcggccatgtcaagtac 160 ||||| |||||||| |||||||| || || |||||||| || || ||||||||||||| | Sbjct: 62 atgactttcaagcgaaggaacggaggtcgtaacaagcatggacgtggccatgtcaagttc 121 Query: 161 atccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttg 220 ||||||||||| ||||||| ||| |||||||| ||||||||||| |||||| | ||| | Sbjct: 122 atccgctgctctaactgcggcaaatgctgccctaaggacaaggccatcaagagattcctt 181 Query: 221 gtgaggaacattgtggagcaggctgctgtgagagatgtgcaggaggcttgtg 272 |||||||||||||| || || |||||||| | ||||| ||||| ||||||| Sbjct: 182 gtgaggaacattgttgaacaagctgctgtacgtgatgttcaggaagcttgtg 233
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 122 ggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgcc 181 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 35147146 ggcggccgcaacaagcacggtcgcggccacgtcaagtacatccgctgctccaactgcgcc 35147205 Query: 182 aagtgctgccccaagg 197 |||||||||||||||| Sbjct: 35147206 aagtgctgccccaagg 35147221 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 281 ggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatccat 340 ||||| |||||||||||||| || ||||||||||| |||||||| || ||||| |||||| Sbjct: 35147587 ggatacgttctccccaagctttacgccaaggtgcatcactgtgtgtcctgtgcaatccat 35147646 Query: 341 gctcacattgtccgtgtccgctcccgtgagaacaggaggaaccg 384 |||||||| |||||||||||||||||||||||| ||||| |||| Sbjct: 35147647 gctcacatcgtccgtgtccgctcccgtgagaaccggagggaccg 35147690 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 25007693 cgccgccgccgcaaaccctagc 25007714 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 195 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggc 243 |||||||||| |||||| | || |||||||||||| ||||||||||| Sbjct: 35147320 aggacaaggcgatcaagaggtttcaggtgaggaacatcgtggagcaggc 35147368 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaacccta 29 |||||||||||||||||||| Sbjct: 38074910 cgccgccgccgcaaacccta 38074929
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 122 ggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgcc 181 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 26230 ggcggccgcaacaagcacggtcgcggccacgtcaagtacatccgctgctccaactgcgcc 26289 Query: 182 aagtgctgccccaagg 197 |||||||||||||||| Sbjct: 26290 aagtgctgccccaagg 26305 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 281 ggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatccat 340 ||||| |||||||||||||| || ||||||||||| |||||||| || ||||| |||||| Sbjct: 26671 ggatacgttctccccaagctttacgccaaggtgcatcactgtgtgtcctgtgcaatccat 26730 Query: 341 gctcacattgtccgtgtccgctcccgtgagaacaggaggaaccg 384 |||||||| |||||||||||||||||||||||| ||||| |||| Sbjct: 26731 gctcacatcgtccgtgtccgctcccgtgagaaccggagggaccg 26774 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 195 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggc 243 |||||||||| |||||| | || |||||||||||| ||||||||||| Sbjct: 26404 aggacaaggcgatcaagaggtttcaggtgaggaacatcgtggagcaggc 26452
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 122 ggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgcc 181 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 154296 ggcggccgcaacaagcacggtcgcggccacgtcaagtacatccgctgctccaactgcgcc 154355 Query: 182 aagtgctgccccaagg 197 |||||||||||||||| Sbjct: 154356 aagtgctgccccaagg 154371 Score = 127 bits (64), Expect = 3e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 281 ggatatgttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatccat 340 ||||| |||||||||||||| || ||||||||||| |||||||| || ||||| |||||| Sbjct: 154737 ggatacgttctccccaagctttacgccaaggtgcatcactgtgtgtcctgtgcaatccat 154796 Query: 341 gctcacattgtccgtgtccgctcccgtgagaacaggaggaaccg 384 |||||||| |||||||||||||||||||||||| ||||| |||| Sbjct: 154797 gctcacatcgtccgtgtccgctcccgtgagaaccggagggaccg 154840 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 195 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggc 243 |||||||||| |||||| | || |||||||||||| ||||||||||| Sbjct: 154470 aggacaaggcgatcaagaggtttcaggtgaggaacatcgtggagcaggc 154518
>ref|NM_129621.2| Arabidopsis thaliana structural constituent of ribosome AT2G40590 mRNA, complete cds Length = 636 Score = 99.6 bits (50), Expect = 7e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 167 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 226 ||||||||||||| ||| |||||||| ||||||||||| || ||| | ||| | |||||| Sbjct: 137 tgctccaactgcggcaaatgctgccctaaggacaaggccattaagaggttcattgtgagg 196 Query: 227 aacattgtggagcaggctgctgtgagagatgtgcagga 264 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 197 aacattgtggagcaggctgctattagagatgttcagga 234
>gb|BT001026.1| Arabidopsis thaliana At2g40590/T2P4.6 mRNA, complete cds Length = 396 Score = 99.6 bits (50), Expect = 7e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 167 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 226 ||||||||||||| ||| |||||||| ||||||||||| || ||| | ||| | |||||| Sbjct: 67 tgctccaactgcggcaaatgctgccctaaggacaaggccattaagaggttcattgtgagg 126 Query: 227 aacattgtggagcaggctgctgtgagagatgtgcagga 264 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 127 aacattgtggagcaggctgctattagagatgttcagga 164
>gb|AY127000.1| Arabidopsis thaliana At2g40590/T2P4.6 mRNA, complete cds Length = 640 Score = 99.6 bits (50), Expect = 7e-18 Identities = 86/98 (87%) Strand = Plus / Plus Query: 167 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 226 ||||||||||||| ||| |||||||| ||||||||||| || ||| | ||| | |||||| Sbjct: 139 tgctccaactgcggcaaatgctgccctaaggacaaggccattaagaggttcattgtgagg 198 Query: 227 aacattgtggagcaggctgctgtgagagatgtgcagga 264 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 199 aacattgtggagcaggctgctattagagatgttcagga 236
>ref|NM_129613.2| Arabidopsis thaliana structural constituent of ribosome AT2G40510 mRNA, complete cds Length = 660 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 167 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 226 ||||||||||| | ||| || ||||||||||||||||| || ||| | ||| | |||||| Sbjct: 138 tgctccaactgtggcaaatgttgccccaaggacaaggccattaagaggttcattgtgagg 197 Query: 227 aacattgtggagcaggctgctgtgagagatgtgcagga 264 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 198 aacattgtggagcaggctgctattagagatgttcagga 235
>gb|BT020291.1| Arabidopsis thaliana At2g40510 gene, complete cds Length = 417 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 167 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 226 ||||||||||| | ||| || ||||||||||||||||| || ||| | ||| | |||||| Sbjct: 82 tgctccaactgtggcaaatgttgccccaaggacaaggccattaagaggttcattgtgagg 141 Query: 227 aacattgtggagcaggctgctgtgagagatgtgcagga 264 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 142 aacattgtggagcaggctgctattagagatgttcagga 179
>gb|AY099673.1| Arabidopsis thaliana 40S ribosomal protein S26 (At2g40510) mRNA, complete cds Length = 607 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 167 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 226 ||||||||||| | ||| || ||||||||||||||||| || ||| | ||| | |||||| Sbjct: 138 tgctccaactgtggcaaatgttgccccaaggacaaggccattaagaggttcattgtgagg 197 Query: 227 aacattgtggagcaggctgctgtgagagatgtgcagga 264 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 198 aacattgtggagcaggctgctattagagatgttcagga 235
>emb|BX842037.1|CNS09Y8A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH32ZA01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 600 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 167 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 226 ||||||||||| | ||| || ||||||||||||||||| || ||| | ||| | |||||| Sbjct: 121 tgctccaactgtggcaaatgttgccccaaggacaaggccattaagaggttcattgtgagg 180 Query: 227 aacattgtggagcaggctgctgtgagagatgtgcagga 264 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 181 aacattgtggagcaggctgctattagagatgttcagga 218
>gb|AY086823.1| Arabidopsis thaliana clone 28121 mRNA, complete sequence Length = 610 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 167 tgctccaactgcgccaagtgctgccccaaggacaaggctatcaagcgtttcttggtgagg 226 ||||||||||| | ||| || ||||||||||||||||| || ||| | ||| | |||||| Sbjct: 134 tgctccaactgtggcaaatgttgccccaaggacaaggccattaagaggttcattgtgagg 193 Query: 227 aacattgtggagcaggctgctgtgagagatgtgcagga 264 ||||||||||||||||||||| | |||||||| ||||| Sbjct: 194 aacattgtggagcaggctgctattagagatgttcagga 231
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 7e-15 Identities = 79/89 (88%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 195 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctgt-gaga 253 |||||||||||||||| ||||||||||||||||| ||||| ||||||||||| || || Sbjct: 33912238 aggacaaggctatcaaccgtttcttggtgaggaatattgttgagcaggctgcagtcttga 33912297 Query: 254 gatgtgcaggaggcttgtgtgcatgatgg 282 ||| |||| ||||||||||| |||||||| Sbjct: 33912298 gatatgcaagaggcttgtgtacatgatgg 33912326 Score = 79.8 bits (40), Expect = 7e-12 Identities = 108/130 (83%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 287 gttctccccaagctgtatgccaaggtgcaccactgtgtttcttg---tgccatccatgct 343 ||||| || ||||||||||| |||||||| ||||| ||||| || ||| || |||||| Sbjct: 33912416 gttcttcctaagctgtatgcaaaggtgcatcactgcgtttcatggaatgcaattcatgct 33912475 Query: 344 cacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagcgtttc 403 ||||||||| |||| ||||| | |||||||||||||| |||||| ||||||| |||| Sbjct: 33912476 cacattgtcagtgttcgctcttgcgagaacaggaggaattgtgagcttccgcagcatttc 33912535 Query: 404 aggcgcaggg 413 ||| |||||| Sbjct: 33912536 aggtgcaggg 33912545 Score = 63.9 bits (32), Expect = 4e-07 Identities = 61/71 (85%), Gaps = 6/71 (8%) Strand = Plus / Plus Query: 110 aagcggaggaacggcggccgcaacaagcacggccgcggcc------atgtcaagtacatc 163 ||||||||||| ||||| |||||||||||||||||||||| | |||||||| ||| Sbjct: 33911687 aagcggaggaatggcgggcgcaacaagcacggccgcggccgcggccacgtcaagtagatc 33911746 Query: 164 cgctgctccaa 174 ||||||||||| Sbjct: 33911747 cgctgctccaa 33911757 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 cgccgccgccgcaaacccta 29 |||||||||||||||||||| Sbjct: 3532341 cgccgccgccgcaaacccta 3532322
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 7e-15 Identities = 79/89 (88%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 195 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctgt-gaga 253 |||||||||||||||| ||||||||||||||||| ||||| ||||||||||| || || Sbjct: 34002710 aggacaaggctatcaaccgtttcttggtgaggaatattgttgagcaggctgcagtcttga 34002769 Query: 254 gatgtgcaggaggcttgtgtgcatgatgg 282 ||| |||| ||||||||||| |||||||| Sbjct: 34002770 gatatgcaagaggcttgtgtacatgatgg 34002798 Score = 79.8 bits (40), Expect = 7e-12 Identities = 108/130 (83%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 287 gttctccccaagctgtatgccaaggtgcaccactgtgtttcttg---tgccatccatgct 343 ||||| || ||||||||||| |||||||| ||||| ||||| || ||| || |||||| Sbjct: 34002888 gttcttcctaagctgtatgcaaaggtgcatcactgcgtttcatggaatgcaattcatgct 34002947 Query: 344 cacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagcgtttc 403 ||||||||| |||| ||||| | |||||||||||||| |||||| ||||||| |||| Sbjct: 34002948 cacattgtcagtgttcgctcttgcgagaacaggaggaattgtgagcttccgcagcatttc 34003007 Query: 404 aggcgcaggg 413 ||| |||||| Sbjct: 34003008 aggtgcaggg 34003017 Score = 63.9 bits (32), Expect = 4e-07 Identities = 61/71 (85%), Gaps = 6/71 (8%) Strand = Plus / Plus Query: 110 aagcggaggaacggcggccgcaacaagcacggccgcggcc------atgtcaagtacatc 163 ||||||||||| ||||| |||||||||||||||||||||| | |||||||| ||| Sbjct: 34002159 aagcggaggaatggcgggcgcaacaagcacggccgcggccgcggccacgtcaagtagatc 34002218 Query: 164 cgctgctccaa 174 ||||||||||| Sbjct: 34002219 cgctgctccaa 34002229 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 cgccgccgccgcaaacccta 29 |||||||||||||||||||| Sbjct: 3532452 cgccgccgccgcaaacccta 3532433
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 89.7 bits (45), Expect = 7e-15 Identities = 79/89 (88%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 195 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctgt-gaga 253 |||||||||||||||| ||||||||||||||||| ||||| ||||||||||| || || Sbjct: 145453 aggacaaggctatcaaccgtttcttggtgaggaatattgttgagcaggctgcagtcttga 145394 Query: 254 gatgtgcaggaggcttgtgtgcatgatgg 282 ||| |||| ||||||||||| |||||||| Sbjct: 145393 gatatgcaagaggcttgtgtacatgatgg 145365 Score = 79.8 bits (40), Expect = 7e-12 Identities = 108/130 (83%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 287 gttctccccaagctgtatgccaaggtgcaccactgtgtttcttg---tgccatccatgct 343 ||||| || ||||||||||| |||||||| ||||| ||||| || ||| || |||||| Sbjct: 145275 gttcttcctaagctgtatgcaaaggtgcatcactgcgtttcatggaatgcaattcatgct 145216 Query: 344 cacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagcgtttc 403 ||||||||| |||| ||||| | |||||||||||||| |||||| ||||||| |||| Sbjct: 145215 cacattgtcagtgttcgctcttgcgagaacaggaggaattgtgagcttccgcagcatttc 145156 Query: 404 aggcgcaggg 413 ||| |||||| Sbjct: 145155 aggtgcaggg 145146 Score = 63.9 bits (32), Expect = 4e-07 Identities = 61/71 (85%), Gaps = 6/71 (8%) Strand = Plus / Minus Query: 110 aagcggaggaacggcggccgcaacaagcacggccgcggcc------atgtcaagtacatc 163 ||||||||||| ||||| |||||||||||||||||||||| | |||||||| ||| Sbjct: 146004 aagcggaggaatggcgggcgcaacaagcacggccgcggccgcggccacgtcaagtagatc 145945 Query: 164 cgctgctccaa 174 ||||||||||| Sbjct: 145944 cgctgctccaa 145934
>ref|XM_470096.1| Oryza sativa (japonica cultivar-group), mRNA Length = 327 Score = 79.8 bits (40), Expect = 7e-12 Identities = 108/130 (83%), Gaps = 3/130 (2%) Strand = Plus / Plus Query: 287 gttctccccaagctgtatgccaaggtgcaccactgtgtttcttg---tgccatccatgct 343 ||||| || ||||||||||| |||||||| ||||| ||||| || ||| || |||||| Sbjct: 184 gttcttcctaagctgtatgcaaaggtgcatcactgcgtttcatggaatgcaattcatgct 243 Query: 344 cacattgtccgtgtccgctcccgtgagaacaggaggaaccgtgagcccccgcagcgtttc 403 ||||||||| |||| ||||| | |||||||||||||| |||||| ||||||| |||| Sbjct: 244 cacattgtcagtgttcgctcttgcgagaacaggaggaattgtgagcttccgcagcatttc 303 Query: 404 aggcgcaggg 413 ||| |||||| Sbjct: 304 aggtgcaggg 313 Score = 77.8 bits (39), Expect = 3e-11 Identities = 70/79 (88%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 196 ggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctgtga-gag 254 ||||||||||||||| ||||||||||||||||| ||||| ||||||||||| || ||| Sbjct: 102 ggacaaggctatcaaccgtttcttggtgaggaatattgttgagcaggctgcagtcttgag 161 Query: 255 atgtgcaggaggcttgtgt 273 || |||| ||||||||||| Sbjct: 162 atatgcaagaggcttgtgt 180 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 139 cggccgcggccatgtcaagtacatccgctgctccaa 174 |||||||||||| |||||||| |||||||||||||| Sbjct: 26 cggccgcggccacgtcaagtagatccgctgctccaa 61 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 122 ggcggccgcaacaagcacggccgcggcc 149 ||||| |||||||||||||||||||||| Sbjct: 3 ggcgggcgcaacaagcacggccgcggcc 30
>gb|DQ455286.1| Medicago truncatula cDNA-AFLP fragment BT11M32_219 sequence Length = 235 Score = 75.8 bits (38), Expect = 1e-10 Identities = 124/150 (82%), Gaps = 2/150 (1%) Strand = Plus / Minus Query: 125 ggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgccaag 184 ||||| ||||| || || || ||||||||||| | ||| || ||||||||||| | || Sbjct: 221 ggccgtaacaaacatggtcgtggccatgtcaaattcattcgttgctccaactgtggtaaa 162 Query: 185 tgctgccccaaggacaaggctatcaag-cgtttcttggtgaggaacattgtggagcaggc 243 ||||| ||||||||||||||||||||| ||||||| || ||||||||||| || || || Sbjct: 161 tgctgtcccaaggacaaggctatcaagaggtttctt-gttaggaacattgttgaacaagc 103 Query: 244 tgctgtgagagatgtgcaggaggcttgtgt 273 ||| || |||||||| || || |||||||| Sbjct: 102 tgcagttagagatgtacaagaagcttgtgt 73
>ref|XM_323904.1| Neurospora crassa OR74A hypothetical protein (NCU04552.1) partial mRNA Length = 360 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 124 cggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||||||||||| | ||||||||||| |||||| ||||||||||||||||||| Sbjct: 24 cggccgcaacaagaagggccgcggccacgtcaagcccatccgctgctccaactgc 78
>ref|XM_950850.1| Neurospora crassa OR74A hypothetical protein (NCU04552.1) partial mRNA Length = 360 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 124 cggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||||||||||| | ||||||||||| |||||| ||||||||||||||||||| Sbjct: 24 cggccgcaacaagaagggccgcggccacgtcaagcccatccgctgctccaactgc 78
>emb|X55637.1|NCRPSSU N. crassa mRNA for a ribosomal protein Length = 685 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 124 cggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||||||||||| | ||||||||||| |||||| ||||||||||||||||||| Sbjct: 70 cggccgcaacaagaagggccgcggccacgtcaagcccatccgctgctccaactgc 124
>gb|M95597.1|NEUCRP5A Neurospora crassa ribosomal protein (crp-5) gene, 5' end Length = 1616 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 124 cggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||||||||||| | ||||||||||| |||||| ||||||||||||||||||| Sbjct: 1358 cggccgcaacaagaagggccgcggccacgtcaagcccatccgctgctccaactgc 1412
>gb|AC002336.3| Arabidopsis thaliana chromosome 2 clone T2P4 map CIC10A06, complete sequence Length = 84675 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 195 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctgtgagag 254 |||||||||| || ||| | ||| | ||||||||||||||||||||||||||| | |||| Sbjct: 44476 aggacaaggccattaagaggttcattgtgaggaacattgtggagcaggctgctattagag 44417 Query: 255 atgtgcagga 264 |||| ||||| Sbjct: 44416 atgttcagga 44407 Score = 67.9 bits (34), Expect = 3e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 195 aggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgctgtgagag 254 |||||||||| || ||| | ||| | ||||||||||||||||||||||||||| | |||| Sbjct: 17190 aggacaaggccattaagaggttcattgtgaggaacattgtggagcaggctgctattagag 17249 Query: 255 atgtgcagga 264 |||| ||||| Sbjct: 17250 atgttcagga 17259
>emb|BX822864.1|CNS0A737 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB69ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 610 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 188 tgccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggagcaggctgct 247 ||||||||||||||||| || ||| | || || || ||||||||||| |||||||||||| Sbjct: 144 tgccccaaggacaaggcgattaagagatttttcgtaaggaacattgttgagcaggctgct 203 Query: 248 gtgagagatgt 258 | |||||||| Sbjct: 204 attagagatgt 214
>gb|AF084202.1|AF084202 Medicago sativa clone MS56 unknown mRNA Length = 697 Score = 61.9 bits (31), Expect = 2e-06 Identities = 105/127 (82%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 148 ccatgtcaagtacatccgctgctccaactgcgccaagtgctgccccaaggacaaggctat 207 ||||||||| | ||| || ||||||||||| | || ||||| |||||||||||||| || Sbjct: 96 ccatgtcaaattcattcgttgctccaactgtggtaaatgctgtcccaaggacaaggcaat 155 Query: 208 caag-cgtttcttggtgaggaacattgtggagcaggctgctgtgagagatgtgcaggagg 266 |||| ||||||| || ||||||||||| || || ||||| || |||||||| ||||| | Sbjct: 156 caagaggtttctt-gttaggaacattgttgaacaagctgcagttagagatgttcaggaag 214 Query: 267 cttgtgt 273 | ||||| Sbjct: 215 catgtgt 221
>ref|NM_115492.2| Arabidopsis thaliana structural constituent of ribosome AT3G56340 mRNA, complete cds Length = 638 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 182 aagtgctgccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggagcag 241 ||||| ||||||||||||||||| || ||| | || | || ||||||||||| |||||| Sbjct: 155 aagtgttgccccaaggacaaggcgattaagagatttatcgtaaggaacattgttgagcag 214 Query: 242 gctgctgtgagagatgt 258 |||||| | |||||||| Sbjct: 215 gctgctattagagatgt 231
>ref|XM_658227.1| Aspergillus nidulans FGSC A4 40S ribosomal protein S26E (AN5715.2), mRNA Length = 360 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 124 cggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgc 180 ||||||||||||| ||||||||||||| || ||| | | ||||||||||||||||| Sbjct: 24 cggccgcaacaagaacggccgcggccacgttaagcccgtgcgctgctccaactgcgc 80
>ref|XM_745333.1| Aspergillus fumigatus Af293 ribosomal protein S26e (Afu1g06770) partial mRNA Length = 360 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 128 cgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgc 180 ||||||||| ||||||||||||| |||||| | | ||||||||||||||||| Sbjct: 28 cgcaacaagaacggccgcggccacgtcaagcccgtgcgctgctccaactgcgc 80
>gb|AY133664.1| Arabidopsis thaliana AT3g56340/F18O21_300 mRNA, complete cds Length = 393 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 182 aagtgctgccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggagcag 241 ||||| ||||||||||||||||| || ||| | || | || ||||||||||| |||||| Sbjct: 82 aagtgttgccccaaggacaaggcgattaagagatttatcgtaaggaacattgttgagcag 141 Query: 242 gctgctgtgagagatgt 258 |||||| | |||||||| Sbjct: 142 gctgctattagagatgt 158
>gb|AY039886.1| Arabidopsis thaliana AT3g56340/F18O21_300 mRNA, complete cds Length = 602 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 182 aagtgctgccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggagcag 241 ||||| ||||||||||||||||| || ||| | || | || ||||||||||| |||||| Sbjct: 155 aagtgttgccccaaggacaaggcgattaagagatttatcgtaaggaacattgttgagcag 214 Query: 242 gctgctgtgagagatgt 258 |||||| | |||||||| Sbjct: 215 gctgctattagagatgt 231
>gb|AY231816.1| Drosophila yakuba clone yak-em_RpS26 mRNA sequence Length = 342 Score = 50.1 bits (25), Expect = 0.006 Identities = 76/93 (81%) Strand = Plus / Plus Query: 119 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||| || |||||||||||| |||||||||||| ||| | | || ||| |||||||| Sbjct: 19 aacggaggacgcaacaagcacaaccgcggccatgtgaagcccgtgcgttgcaccaactgc 78 Query: 179 gccaagtgctgccccaaggacaaggctatcaag 211 ||| ||| ||||||||||||||||||||| Sbjct: 79 gcccgctgcgtgcccaaggacaaggctatcaag 111
>gb|AC117596.6| Mus musculus chromosome 6, clone RP23-392K24, complete sequence Length = 233811 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 228 acattgtggagcaggctgctgtgag 252 ||||||||||||||||||||||||| Sbjct: 61024 acattgtggagcaggctgctgtgag 61048
>gb|DQ413194.1| Acyrthosiphon pisum isolate WHAP0011 putative ribosomal protein S26 mRNA, complete cds Length = 357 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 312 tgcaccactgtgtttcttgtgccatccat 340 ||||| ||||||||||||||||||||||| Sbjct: 212 tgcactactgtgtttcttgtgccatccat 240
>emb|BX822379.1|CNS0A757 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB32ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 571 Score = 50.1 bits (25), Expect = 0.006 Identities = 64/77 (83%) Strand = Plus / Plus Query: 182 aagtgctgccccaaggacaaggctatcaagcgtttcttggtgaggaacattgtggagcag 241 ||||| ||||||||||||||||| || ||| | || | || ||| ||||||| |||||| Sbjct: 128 aagtgttgccccaaggacaaggcgattaagagatttatcgtaaggcacattgttgagcag 187 Query: 242 gctgctgtgagagatgt 258 |||||| | |||||||| Sbjct: 188 gctgctattagagatgt 204
>emb|AJ719518.1| Gallus gallus mRNA for hypothetical protein, clone 2p17 Length = 463 Score = 48.1 bits (24), Expect = 0.024 Identities = 60/72 (83%) Strand = Plus / Plus Query: 140 ggccgcggccatgtcaagtacatccgctgctccaactgcgccaagtgctgccccaaggac 199 ||||||||||| ||| || |||||||||| ||||||||||| ||| |||||||||| Sbjct: 65 ggccgcggccacgtccagcccatccgctgcaccaactgcgcccgctgcgtccccaaggac 124 Query: 200 aaggctatcaag 211 || || |||||| Sbjct: 125 aaagccatcaag 136
>emb|CT963111.1| Medicago truncatula chromosome 5 clone mth2-43h1, COMPLETE SEQUENCE Length = 120939 Score = 48.1 bits (24), Expect = 0.024 Identities = 68/80 (85%), Gaps = 2/80 (2%) Strand = Plus / Plus Query: 195 aggacaaggctatcaagcg-tttcttggtgaggaacattgtggagcaggctgctgtgaga 253 ||||||||||||||||| | ||||||| | ||||||||||| || || ||||| || ||| Sbjct: 4662 aggacaaggctatcaagaggtttcttgtt-aggaacattgttgaacaagctgcagttaga 4720 Query: 254 gatgtgcaggaggcttgtgt 273 ||||| || || |||||||| Sbjct: 4721 gatgtacaagaagcttgtgt 4740
>emb|CT571263.1| Medicago truncatula chromosome 5 clone mte1-7c20, COMPLETE SEQUENCE Length = 127003 Score = 48.1 bits (24), Expect = 0.024 Identities = 68/80 (85%), Gaps = 2/80 (2%) Strand = Plus / Minus Query: 195 aggacaaggctatcaagcg-tttcttggtgaggaacattgtggagcaggctgctgtgaga 253 ||||||||||||||||| | ||||||| | ||||||||||| || || ||||| || ||| Sbjct: 7736 aggacaaggctatcaagaggtttcttgtt-aggaacattgttgaacaagctgcagttaga 7678 Query: 254 gatgtgcaggaggcttgtgt 273 ||||| || || |||||||| Sbjct: 7677 gatgtacaagaagcttgtgt 7658
>ref|XM_368025.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07929.4) partial mRNA Length = 360 Score = 46.1 bits (23), Expect = 0.096 Identities = 44/51 (86%) Strand = Plus / Plus Query: 128 cgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||||||| | ||||||||||| |||||| |||||| ||||| |||||| Sbjct: 28 cgcaacaagaagggccgcggccacgtcaagcccatccgttgctcaaactgc 78
>ref|XM_755997.1| Ustilago maydis 521 hypothetical protein (UM04943.1) partial mRNA Length = 369 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 191 cccaaggacaaggctatcaagcg 213 ||||||||||||||||||||||| Sbjct: 91 cccaaggacaaggctatcaagcg 113
>ref|XM_572351.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNH01770) partial mRNA Length = 495 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 191 cccaaggacaaggctatcaagcg 213 ||||||||||||||||||||||| Sbjct: 93 cccaaggacaaggctatcaagcg 115
>emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, BAC clone F18O21 Length = 99492 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Minus Query: 224 aggaacattgtggagcaggctgctgtgagagatgt 258 ||||||||||| |||||||||||| | |||||||| Sbjct: 95961 aggaacattgttgagcaggctgctattagagatgt 95927
>emb|AL163972.1|ATT5P19 Arabidopsis thaliana DNA chromosome 3, BAC clone T5P19 Length = 101539 Score = 46.1 bits (23), Expect = 0.096 Identities = 32/35 (91%) Strand = Plus / Minus Query: 224 aggaacattgtggagcaggctgctgtgagagatgt 258 ||||||||||| |||||||||||| | |||||||| Sbjct: 3815 aggaacattgttgagcaggctgctattagagatgt 3781
>gb|AY849657.1| Magnaporthe grisea 40S ribosomal protein S26-like protein mRNA, complete cds Length = 668 Score = 46.1 bits (23), Expect = 0.096 Identities = 44/51 (86%) Strand = Plus / Plus Query: 128 cgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||||||| | ||||||||||| |||||| |||||| ||||| |||||| Sbjct: 75 cgcaacaagaagggccgcggccacgtcaagcccatccgttgctcaaactgc 125
>ref|NM_197576.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBb0064P21.4), mRNA Length = 1312 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 gcgccgccgccgcaaaccctag 30 |||||||||||||||||||||| Sbjct: 53 gcgccgccgccgcaaaccctag 32
>ref|NM_192891.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1140 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 954 cgccgccgccgcaaaccctagc 975
>gb|AY618139.1| Sterkiella histriomuscorum clone UGC1O0006_F08_F genomic sequence Length = 492 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 192 ccaaggacaaggctatcaagcgtttc 217 ||||||||||||| |||||||||||| Sbjct: 183 ccaaggacaaggccatcaagcgtttc 208
>gb|AY617796.1| Sterkiella histriomuscorum clone UGC1O0005_K14_F genomic sequence Length = 630 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 192 ccaaggacaaggctatcaagcgtttc 217 ||||||||||||| |||||||||||| Sbjct: 445 ccaaggacaaggccatcaagcgtttc 420
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 110825 cgccgccgccgcaaaccctagc 110846
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 43806 cgccgccgccgcaaaccctagc 43827
>gb|AF143772.2| Mycobacterium avium strain 2151 glycopeptidolipid biosynthesis and daunorubicin resistance gene clusters and insertion sequences IS1601, IS1245 and IS1348, complete sequence Length = 71286 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 gccgcgccgccgccgcaaaccc 27 |||||||||||||||||||||| Sbjct: 41182 gccgcgccgccgccgcaaaccc 41203
>gb|AY341856.1| Oryza sativa (japonica cultivar-group) WRKY16 mRNA, complete cds Length = 1395 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 1047 cgccgccgccgcaaaccctagc 1068
>tpg|BK005014.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 11 (WRKY11) gene, complete cds Length = 2223 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 2037 cgccgccgccgcaaaccctagc 2058
>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete sequence Length = 142114 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 gcgccgccgccgcaaaccctag 30 |||||||||||||||||||||| Sbjct: 55058 gcgccgccgccgcaaaccctag 55037
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 1888333 cgccgccgccgcaaaccctagc 1888354
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 1972251 cgccgccgccgcaaaccctagc 1972272
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 gcgccgccgccgcaaaccctag 30 |||||||||||||||||||||| Sbjct: 20549768 gcgccgccgccgcaaaccctag 20549747
>dbj|AP002744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0006C01 Length = 153865 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 80216 cgccgccgccgcaaaccctagc 80237
>dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0688A04 Length = 143969 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 7301 cgccgccgccgcaaaccctagc 7322
>dbj|AK108745.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-E09, full insert sequence Length = 1492 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 986 cgccgccgccgcaaaccctagc 1007
>dbj|AK066890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088L20, full insert sequence Length = 2358 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 346 cgccgccgccgcaaaccctagc 367
>dbj|AK066440.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066A01, full insert sequence Length = 3309 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 gcgccgccgccgcaaaccctag 30 |||||||||||||||||||||| Sbjct: 2214 gcgccgccgccgcaaaccctag 2193
>dbj|AK061781.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E02, full insert sequence Length = 1249 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 gcgccgccgccgcaaaccctag 30 |||||||||||||||||||||| Sbjct: 36 gcgccgccgccgcaaaccctag 15
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 gccgcgccgccgccgcaaaccc 27 |||||||||||||||||||||| Sbjct: 1306403 gccgcgccgccgccgcaaaccc 1306424
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 gcgccgccgccgcaaaccctag 30 |||||||||||||||||||||| Sbjct: 20561040 gcgccgccgccgcaaaccctag 20561019
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 1980032 cgccgccgccgcaaaccctagc 1980053
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 1888284 cgccgccgccgcaaaccctagc 1888305
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 83024 cgccgccgccgcaaaccctagc 83045
>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107247 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 cgccgccgccgcaaaccctagc 31 |||||||||||||||||||||| Sbjct: 79888 cgccgccgccgcaaaccctagc 79867
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 ctgctccaactgcgccaagtg 186 ||||||||||||||||||||| Sbjct: 75394 ctgctccaactgcgccaagtg 75414
>emb|AM040004.1| Eucinetus sp. APV-2005 mRNA for ribosomal protein S26e (rpS26e gene) Length = 348 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 287 gttctccccaagctgtatgccaaggtgcaccactgtgtttcttgtgccatcca 339 ||||| ||||| ||||| |||||| ||||| |||| || || ||||||||||| Sbjct: 187 gttctgcccaaactgtacgccaagctgcactactgcgtgtcctgtgccatcca 239
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 caagccgcgccgccgccgcaaaccc 27 ||||||||||||| ||||||||||| Sbjct: 3636583 caagccgcgccgcagccgcaaaccc 3636607
>gb|AY118770.1| Drosophila melanogaster GH11073 full insert cDNA Length = 2355 Score = 42.1 bits (21), Expect = 1.5 Identities = 75/93 (80%) Strand = Plus / Plus Query: 119 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 1793 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 1852 Query: 179 gccaagtgctgccccaaggacaaggctatcaag 211 ||| ||| |||||||||||||| |||||| Sbjct: 1853 gcccgctgcgtgcccaaggacaaggcaatcaag 1885
>dbj|AB226211.1| Aspergillus oryzae cDNA, contig sequence: AoEST3070 Length = 844 Score = 42.1 bits (21), Expect = 1.5 Identities = 66/81 (81%) Strand = Plus / Plus Query: 131 aacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgccaagtgctgc 190 |||||| ||||||||||||| |||| | | ||||||||||||||||| ||| | Sbjct: 115 aacaagaacggccgcggccacaccaagcccgtgcgctgctccaactgcgctcgctgcgtc 174 Query: 191 cccaaggacaaggctatcaag 211 |||||||||||||| |||||| Sbjct: 175 cccaaggacaaggccatcaag 195
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 42.1 bits (21), Expect = 1.5 Identities = 66/81 (81%) Strand = Plus / Minus Query: 131 aacaagcacggccgcggccatgtcaagtacatccgctgctccaactgcgccaagtgctgc 190 |||||| ||||||||||||| |||| | | ||||||||||||||||| ||| | Sbjct: 1212974 aacaagaacggccgcggccacaccaagcccgtgcgctgctccaactgcgctcgctgcgtc 1212915 Query: 191 cccaaggacaaggctatcaag 211 |||||||||||||| |||||| Sbjct: 1212914 cccaaggacaaggccatcaag 1212894
>ref|NM_165253.1| Drosophila melanogaster Ribosomal protein S26 CG10305-RC, transcript variant C (RpS26), mRNA Length = 632 Score = 42.1 bits (21), Expect = 1.5 Identities = 75/93 (80%) Strand = Plus / Plus Query: 119 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 86 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 145 Query: 179 gccaagtgctgccccaaggacaaggctatcaag 211 ||| ||| |||||||||||||| |||||| Sbjct: 146 gcccgctgcgtgcccaaggacaaggcaatcaag 178
>ref|NM_165252.1| Drosophila melanogaster Ribosomal protein S26 CG10305-RA, transcript variant A (RpS26), mRNA Length = 658 Score = 42.1 bits (21), Expect = 1.5 Identities = 75/93 (80%) Strand = Plus / Plus Query: 119 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 112 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 171 Query: 179 gccaagtgctgccccaaggacaaggctatcaag 211 ||| ||| |||||||||||||| |||||| Sbjct: 172 gcccgctgcgtgcccaaggacaaggcaatcaag 204
>ref|NM_078871.4| Drosophila melanogaster Ribosomal protein S26 CG10305-RB, transcript variant B (RpS26), mRNA Length = 661 Score = 42.1 bits (21), Expect = 1.5 Identities = 75/93 (80%) Strand = Plus / Plus Query: 119 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 115 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 174 Query: 179 gccaagtgctgccccaaggacaaggctatcaag 211 ||| ||| |||||||||||||| |||||| Sbjct: 175 gcccgctgcgtgcccaaggacaaggcaatcaag 207
>gb|AY069761.1| Drosophila melanogaster RE01079 full length cDNA Length = 665 Score = 42.1 bits (21), Expect = 1.5 Identities = 75/93 (80%) Strand = Plus / Plus Query: 119 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 112 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 171 Query: 179 gccaagtgctgccccaaggacaaggctatcaag 211 ||| ||| |||||||||||||| |||||| Sbjct: 172 gcccgctgcgtgcccaaggacaaggcaatcaag 204
>gb|AC006590.11|AC006590 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone BACR13N02, complete sequence Length = 172479 Score = 42.1 bits (21), Expect = 1.5 Identities = 75/93 (80%) Strand = Plus / Minus Query: 119 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 8997 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 8938 Query: 179 gccaagtgctgccccaaggacaaggctatcaag 211 ||| ||| |||||||||||||| |||||| Sbjct: 8937 gcccgctgcgtgcccaaggacaaggcaatcaag 8905
>gb|AC008184.4|AC008184 Drosophila melanogaster, chromosome 2L, region 36E5-36F2, BAC clone BACR04D05, complete sequence Length = 154730 Score = 42.1 bits (21), Expect = 1.5 Identities = 75/93 (80%) Strand = Plus / Minus Query: 119 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 86518 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 86459 Query: 179 gccaagtgctgccccaaggacaaggctatcaag 211 ||| ||| |||||||||||||| |||||| Sbjct: 86458 gcccgctgcgtgcccaaggacaaggcaatcaag 86426
>gb|AE003659.2| Drosophila melanogaster chromosome 2L, section 68 of 83 of the complete sequence Length = 260027 Score = 42.1 bits (21), Expect = 1.5 Identities = 75/93 (80%) Strand = Plus / Minus Query: 119 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 25909 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 25850 Query: 179 gccaagtgctgccccaaggacaaggctatcaag 211 ||| ||| |||||||||||||| |||||| Sbjct: 25849 gcccgctgcgtgcccaaggacaaggcaatcaag 25817
>emb|X13625.2|DMRPS26 Drosophila melanogaster mRNA for putative ribosomal protein S31 Length = 567 Score = 42.1 bits (21), Expect = 1.5 Identities = 75/93 (80%) Strand = Plus / Plus Query: 119 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 76 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 135 Query: 179 gccaagtgctgccccaaggacaaggctatcaag 211 ||| ||| |||||||||||||| |||||| Sbjct: 136 gcccgctgcgtgcccaaggacaaggcaatcaag 168
>emb|X14247.1|DMRPS31 Drosophila melanogaster gene for putative ribosomal protein S31 Length = 780 Score = 42.1 bits (21), Expect = 1.5 Identities = 75/93 (80%) Strand = Plus / Plus Query: 119 aacggcggccgcaacaagcacggccgcggccatgtcaagtacatccgctgctccaactgc 178 ||||| || |||||||||||| ||||||||||| ||| | | |||||| |||||||| Sbjct: 245 aacggaggacgcaacaagcacaatcgcggccatgtgaagcccgtgcgctgcaccaactgc 304 Query: 179 gccaagtgctgccccaaggacaaggctatcaag 211 ||| ||| |||||||||||||| |||||| Sbjct: 305 gcccgctgcgtgcccaaggacaaggcaatcaag 337
>gb|AC152884.1| Pan troglodytes chromosome 17 clone RP43-O52L01 map human ortholog 17q21.33, complete sequence Length = 162327 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gtgcaggaggcttgtgtgca 276 |||||||||||||||||||| Sbjct: 120954 gtgcaggaggcttgtgtgca 120973
>gb|BC059532.1| Danio rerio ribosomal protein S26, like, mRNA (cDNA clone MGC:73182 IMAGE:4786707), complete cds Length = 438 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 160 catccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaag 211 |||||||||| ||||||||||| ||| |||||| |||||||| |||||| Sbjct: 66 catccgctgcaccaactgcgcccgctgcgtccccaaagacaaggccatcaag 117
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 gcaccactgtgtttcttgtg 332 |||||||||||||||||||| Sbjct: 71231 gcaccactgtgtttcttgtg 71212
>gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1562_H01, complete sequence Length = 88352 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 gccgcgccgccgccgcaaac 25 |||||||||||||||||||| Sbjct: 36855 gccgcgccgccgccgcaaac 36836
>ref|XM_457166.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B04565g) partial mRNA Length = 360 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 312 tgcaccactgtgtttcttgtgccatcca 339 ||||| ||||||| |||||||||||||| Sbjct: 212 tgcactactgtgtctcttgtgccatcca 239
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 atgacgttcaagcggaggaa 120 |||||||||||||||||||| Sbjct: 2327361 atgacgttcaagcggaggaa 2327342 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 atgacgttcaagcggaggaa 120 |||||||||||||||||||| Sbjct: 2218465 atgacgttcaagcggaggaa 2218484 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 atgacgttcaagcggaggaa 120 |||||||||||||||||||| Sbjct: 1924713 atgacgttcaagcggaggaa 1924694 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 atgacgttcaagcggaggaa 120 |||||||||||||||||||| Sbjct: 1808770 atgacgttcaagcggaggaa 1808751 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 atgacgttcaagcggaggaa 120 |||||||||||||||||||| Sbjct: 990595 atgacgttcaagcggaggaa 990576 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 atgacgttcaagcggaggaa 120 |||||||||||||||||||| Sbjct: 479958 atgacgttcaagcggaggaa 479939 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 atgacgttcaagcggaggaa 120 |||||||||||||||||||| Sbjct: 300269 atgacgttcaagcggaggaa 300250
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 atgacgttcaagcggaggaa 120 |||||||||||||||||||| Sbjct: 516006 atgacgttcaagcggaggaa 515987 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 atgacgttcaagcggaggaa 120 |||||||||||||||||||| Sbjct: 343102 atgacgttcaagcggaggaa 343083 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 atgacgttcaagcggaggaa 120 |||||||||||||||||||| Sbjct: 89950 atgacgttcaagcggaggaa 89931
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cgcagcgtttcaggcgcagg 412 |||||||||||||||||||| Sbjct: 460050 cgcagcgtttcaggcgcagg 460069
>ref|XM_504158.1| Yarrowia lipolytica CLIB122, YALI0E19701g predicted mRNA Length = 363 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ccccaaggacaaggctatcaagcg 213 ||||||||||||||| |||||||| Sbjct: 90 ccccaaggacaaggccatcaagcg 113
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gctgctccaactgcgccaag 184 |||||||||||||||||||| Sbjct: 3431204 gctgctccaactgcgccaag 3431223
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 312 tgcaccactgtgtttcttgtgccatcca 339 ||||| ||||||| |||||||||||||| Sbjct: 377278 tgcactactgtgtctcttgtgccatcca 377305
>emb|AL117212.1|SPAC806 S.pombe chromosome I cosmid c806 Length = 22870 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 ccccaaggacaaggctatcaagcg 213 ||||||||||||||| |||||||| Sbjct: 5652 ccccaaggacaaggccatcaagcg 5629
>ref|NM_132256.1| Drosophila melanogaster CG15350-RA (Cp7Fb), mRNA Length = 1503 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ccaagctgtatgccaaggtg 313 |||||||||||||||||||| Sbjct: 284 ccaagctgtatgccaaggtg 303
>gb|AC021491.16| Homo sapiens chromosome 17, clone RP11-94C24, complete sequence Length = 175262 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gtgcaggaggcttgtgtgca 276 |||||||||||||||||||| Sbjct: 17047 gtgcaggaggcttgtgtgca 17028
>ref|NM_001018254.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC806.03c), partial mRNA Length = 363 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ccccaaggacaaggctatcaagcg 213 ||||||||||||||| |||||||| Sbjct: 90 ccccaaggacaaggccatcaagcg 113
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ccaagccgcgccgccgccgc 21 |||||||||||||||||||| Sbjct: 17316080 ccaagccgcgccgccgccgc 17316061 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ccaagccgcgccgccgccgc 21 |||||||||||||||||||| Sbjct: 17281047 ccaagccgcgccgccgccgc 17281028
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ccaagccgcgccgccgccgc 21 |||||||||||||||||||| Sbjct: 12325309 ccaagccgcgccgccgccgc 12325290
>emb|AL662967.2|OSJN00166 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0034E24, complete sequence Length = 152220 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ccaagccgcgccgccgccgc 21 |||||||||||||||||||| Sbjct: 116304 ccaagccgcgccgccgccgc 116285 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ccaagccgcgccgccgccgc 21 |||||||||||||||||||| Sbjct: 81271 ccaagccgcgccgccgccgc 81252
>ref|NM_200742.1| Danio rerio ribosomal protein S26, like (rps26l), mRNA Length = 438 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 160 catccgctgctccaactgcgccaagtgctgccccaaggacaaggctatcaag 211 |||||||||| ||||||||||| ||| |||||| |||||||| |||||| Sbjct: 66 catccgctgcaccaactgcgcccgctgcgtccccaaagacaaggccatcaag 117
>gb|AC009958.3| Homo sapiens BAC clone RP11-316G9 from 2, complete sequence Length = 211201 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tgtggagcaggctgctgtga 251 |||||||||||||||||||| Sbjct: 163378 tgtggagcaggctgctgtga 163397
>gb|AC110080.2| Homo sapiens BAC clone RP11-421K23 from 2, complete sequence Length = 172465 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tgtggagcaggctgctgtga 251 |||||||||||||||||||| Sbjct: 90707 tgtggagcaggctgctgtga 90726
>gb|AC023696.4| Drosophila melanogaster X BAC RP98-17J10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174367 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ccaagctgtatgccaaggtg 313 |||||||||||||||||||| Sbjct: 64426 ccaagctgtatgccaaggtg 64445
>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19, complete sequence Length = 150620 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 cgccgccgccgcaaacccta 29 |||||||||||||||||||| Sbjct: 49994 cgccgccgccgcaaacccta 49975
>dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0471B04 Length = 138025 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 cgccgccgccgcaaacccta 29 |||||||||||||||||||| Sbjct: 42944 cgccgccgccgcaaacccta 42963
>dbj|AP005063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016I05 Length = 140933 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ccaagccgcgccgccgccgc 21 |||||||||||||||||||| Sbjct: 72469 ccaagccgcgccgccgccgc 72450
>dbj|AK108808.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-D04, full insert sequence Length = 3427 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 gccgcgccgccgccgcaaac 25 |||||||||||||||||||| Sbjct: 93 gccgcgccgccgccgcaaac 112
>dbj|AK108295.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-E05, full insert sequence Length = 546 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ccccaaggacaaggctatcaagcg 213 ||||||||||||||| |||||||| Sbjct: 106 ccccaaggacaaggcgatcaagcg 129
>dbj|AK099148.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055M03, full insert sequence Length = 1243 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 gcgccgccgccgcaaaccct 28 |||||||||||||||||||| Sbjct: 21 gcgccgccgccgcaaaccct 2
>emb|AL845306.9| Zebrafish DNA sequence from clone DKEY-217M5 in linkage group 20, complete sequence Length = 186675 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 tgctgtgagagatgtgcagg 263 |||||||||||||||||||| Sbjct: 57900 tgctgtgagagatgtgcagg 57919
>emb|X63389.1|CCRNS26MR C.cricetus mRNA for ribosomal protein S26 Length = 437 Score = 40.1 bits (20), Expect = 5.9 Identities = 59/72 (81%) Strand = Plus / Plus Query: 140 ggccgcggccatgtcaagtacatccgctgctccaactgcgccaagtgctgccccaaggac 199 |||||||||||||| || ||||||||| | ||||||||| |||| ||||||||| Sbjct: 63 ggccgcggccatgtgcagccgatccgctgcacgaactgcgcccggtgcgtgcccaaggac 122 Query: 200 aaggctatcaag 211 ||||| |||||| Sbjct: 123 aaggccatcaag 134
>gb|AE003444.3| Drosophila melanogaster chromosome X, section 28 of 74 of the complete sequence Length = 299633 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ccaagctgtatgccaaggtg 313 |||||||||||||||||||| Sbjct: 58880 ccaagctgtatgccaaggtg 58899
>gb|AC004590.1|AC004590 Homo sapiens chromosome 17, clone hCIT.22_K_21, complete sequence Length = 135259 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gtgcaggaggcttgtgtgca 276 |||||||||||||||||||| Sbjct: 59143 gtgcaggaggcttgtgtgca 59162
>ref|NG_000834.1| Homo sapiens immunoglobulin kappa locus, proximal V-cluster and J-C cluster (IGK-proximal) on chromosome 2 Length = 515442 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tgtggagcaggctgctgtga 251 |||||||||||||||||||| Sbjct: 92530 tgtggagcaggctgctgtga 92511
>ref|NG_000833.1| Homo sapiens immunoglobulin kappa locus, distal duplicated V-cluster (IGK-distal) on chromosome 2 Length = 407661 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tgtggagcaggctgctgtga 251 |||||||||||||||||||| Sbjct: 315576 tgtggagcaggctgctgtga 315595
>dbj|AP001235.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:cos607/7B8 Length = 8421 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tgtggagcaggctgctgtga 251 |||||||||||||||||||| Sbjct: 4453 tgtggagcaggctgctgtga 4434
>dbj|AP001226.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:cos237 Length = 33101 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tgtggagcaggctgctgtga 251 |||||||||||||||||||| Sbjct: 25328 tgtggagcaggctgctgtga 25347 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,108,786 Number of Sequences: 3902068 Number of extensions: 3108786 Number of successful extensions: 73513 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 71829 Number of HSP's gapped (non-prelim): 1656 length of query: 440 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 418 effective length of database: 17,147,199,772 effective search space: 7167529504696 effective search space used: 7167529504696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)