Clone Name | bastl56a12 |
---|---|
Clone Library Name | barley_pub |
>ACA1_ARATH (Q37145) Calcium-transporting ATPase 1, chloroplast precursor (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) Length = 1020 Score = 91.7 bits (226), Expect = 7e-19 Identities = 44/53 (83%), Positives = 47/53 (88%) Frame = +1 Query: 265 MESYLNENFGGVKPKHSSDEALGRWRKVVGVVKNPKRRFRFTANLGKRSEAAA 423 MESYLNENFG VKPK+SSDEAL RWRK+ +VKNPKRRFRFTANL KRSEA A Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEA 53
>ACA2_ARATH (O81108) Calcium-transporting ATPase 2, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 2) Length = 1014 Score = 81.3 bits (199), Expect = 9e-16 Identities = 41/53 (77%), Positives = 44/53 (83%) Frame = +1 Query: 265 MESYLNENFGGVKPKHSSDEALGRWRKVVGVVKNPKRRFRFTANLGKRSEAAA 423 MESYLNENF VK KHSS+E L +WR + GVVKNPKRRFRFTANL KR EAAA Sbjct: 1 MESYLNENFD-VKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAA 52
>ACA7_ARATH (O64806) Putative calcium-transporting ATPase 7, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 7) Length = 1015 Score = 77.0 bits (188), Expect = 2e-14 Identities = 39/53 (73%), Positives = 42/53 (79%) Frame = +1 Query: 265 MESYLNENFGGVKPKHSSDEALGRWRKVVGVVKNPKRRFRFTANLGKRSEAAA 423 MESYLN NF VK KHSS+E L +WR + VVKNPKRRFRFTANL KR EAAA Sbjct: 1 MESYLNSNFD-VKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAA 52
>ACA11_ARATH (Q9M2L4) Putative calcium-transporting ATPase 11, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 11) Length = 1025 Score = 40.4 bits (93), Expect = 0.002 Identities = 21/39 (53%), Positives = 25/39 (64%) Frame = +1 Query: 298 VKPKHSSDEALGRWRKVVGVVKNPKRRFRFTANLGKRSE 414 V K+ S EA RWR VG+VKN RRFR +NL K +E Sbjct: 10 VASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAE 48
>ACA10_ARATH (Q9SZR1) Putative calcium-transporting ATPase 10, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 10) Length = 1069 Score = 35.4 bits (80), Expect = 0.056 Identities = 22/55 (40%), Positives = 30/55 (54%) Frame = +1 Query: 250 AGTPAMESYLNENFGGVKPKHSSDEALGRWRKVVGVVKNPKRRFRFTANLGKRSE 414 AGT + Y + F K++ E L RWR+ +V N RRFR+T +L KR E Sbjct: 18 AGTSSFTEYEDSPFDIASTKNAPVERLRRWRQ-AALVLNASRRFRYTLDL-KREE 70
>ACA4_ARATH (O22218) Calcium-transporting ATPase 4, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 4) Length = 1030 Score = 34.7 bits (78), Expect = 0.096 Identities = 18/39 (46%), Positives = 24/39 (61%) Frame = +1 Query: 298 VKPKHSSDEALGRWRKVVGVVKNPKRRFRFTANLGKRSE 414 V+ K+ S EA RWR V +VKN RRFR +L K ++ Sbjct: 10 VEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLAD 48
>ACA8_ARATH (Q9LF79) Calcium-transporting ATPase 8, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 8) Length = 1074 Score = 33.1 bits (74), Expect = 0.28 Identities = 17/39 (43%), Positives = 24/39 (61%) Frame = +1 Query: 298 VKPKHSSDEALGRWRKVVGVVKNPKRRFRFTANLGKRSE 414 + K++S E L +WRK +V N RRFR+T +L K E Sbjct: 34 IPSKNASIERLQQWRKAA-LVLNASRRFRYTLDLKKEQE 71
>NPAS2_MOUSE (P97460) Neuronal PAS domain protein 2 (Neuronal PAS2)| Length = 816 Score = 32.7 bits (73), Expect = 0.37 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Frame = -1 Query: 389 VKRKRRLGFLTTPTTLRHRPSASSDECLGLTPPK-FSLR*LSMAGVPAAPLPSLLSTNS 216 V+R++ L PT H PSA ++ L PP+ F+ + +G+P++P PS S +S Sbjct: 358 VERRQELALEDPPTEAMH-PSAVKEKDSSLEPPQPFNALDMGASGLPSSPSPSASSRSS 415
>ACA9_ARATH (Q9LU41) Putative calcium-transporting ATPase 9, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9) Length = 1073 Score = 32.3 bits (72), Expect = 0.48 Identities = 16/33 (48%), Positives = 23/33 (69%) Frame = +1 Query: 307 KHSSDEALGRWRKVVGVVKNPKRRFRFTANLGK 405 K++S E+L RWR+ +V N RRFR+T +L K Sbjct: 38 KNASVESLRRWRQAA-LVLNASRRFRYTLDLNK 69
>ICK_HUMAN (Q9UPZ9) Serine/threonine-protein kinase ICK (EC 2.7.11.22)| (Intestinal cell kinase) (hICK) (MAK-related kinase) (MRK) (Laryngeal cancer kinase 2) (LCK2) Length = 632 Score = 32.0 bits (71), Expect = 0.62 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 9/76 (11%) Frame = +2 Query: 2 RSDPLPYLKNSPPSMKSAAPEDRI---------PPLP*KYRPSR*PQSRTHVPTTRQRRS 154 ++ P PY+K PP+ A P RI PPL Y P + SRT P+ Q Sbjct: 310 KAGPPPYIKPVPPAQPPAKPHTRISSRQHQASQPPLHLTY-PYKAEVSRTDHPSHLQEDK 368 Query: 155 PTRFLPGKCRSEEPRA 202 P+ L ++ P++ Sbjct: 369 PSPLLFPSLHNKHPQS 384
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 31.6 bits (70), Expect = 0.81 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Frame = +2 Query: 2 RSDPLPYLKNS--PPSMKSAAPEDRIPPLP*KYRPSR*PQSRT--HVPTTRQRRSPT 160 RS LP ++ PP +S +P PP+ +Y PS P+ RT P ++R SP+ Sbjct: 565 RSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPS 621
>ADDA_RAT (Q63028) Alpha-adducin (Erythrocyte adducin alpha subunit)| Length = 735 Score = 31.6 bits (70), Expect = 0.81 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = -1 Query: 224 TNSAVSI*HAAPQTGIFPEGSAWGTVVDASWVRGSDSVATSTGDTFM--EVAVFCPRGRL 51 T S ++ AAPQ G+ + G V + +RGSDS+A G+ + ++A F L Sbjct: 99 TASVPNVYPAAPQGGMAALNMSLGMVTPVNDLRGSDSIAYDKGEKLLRCKLAAFYRLADL 158 Query: 50 ISW 42 W Sbjct: 159 FGW 161
>ADDA_MOUSE (Q9QYC0) Alpha-adducin (Erythrocyte adducin alpha subunit)| Length = 735 Score = 31.6 bits (70), Expect = 0.81 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = -1 Query: 224 TNSAVSI*HAAPQTGIFPEGSAWGTVVDASWVRGSDSVATSTGDTFM--EVAVFCPRGRL 51 T S ++ AAPQ G+ + G V + +RGSDS+A G+ + ++A F L Sbjct: 99 TASVPNVYPAAPQGGMAALNMSLGMVTPVNDLRGSDSIAYDKGEKLLRCKLAAFYRLADL 158 Query: 50 ISW 42 W Sbjct: 159 FGW 161
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 31.2 bits (69), Expect = 1.1 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = +2 Query: 35 PPSMKSAAPEDRIPPLP*KYRPSR*PQSRTHVPTTRQRRSPTRFLPGKCR 184 PP +S +P PP+ +Y PS P+ RT P +R + P K R Sbjct: 585 PPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRR 634
>KLF4_HUMAN (O43474) Krueppel-like factor 4 (Epithelial zinc-finger protein| EZF) (Gut-enriched krueppel-like factor) Length = 470 Score = 31.2 bits (69), Expect = 1.1 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 5/60 (8%) Frame = +2 Query: 77 PLP*KYRPSR*PQSRTHVPTTRQRRSPTRFL-----PGKCRSEEPRAI*IRRSWWRGGTA 241 PLP + P P + +P Q + P PG C EEP+ RRSW R TA Sbjct: 326 PLPPGFHPHPGPNYPSFLPDQMQPQVPPLHYQELMPPGSCMPEEPKPKRGRRSWPRKRTA 385
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 31.2 bits (69), Expect = 1.1 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = +2 Query: 35 PPSMKSAAPEDRIPPLP*KYRPSR*PQSRTHVPTTRQRRSPTRFLPGKCR 184 PP +S +P PP+ +Y PS P+ RT P +R + P K R Sbjct: 604 PPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRR 653 Score = 28.5 bits (62), Expect = 6.9 Identities = 35/139 (25%), Positives = 46/139 (33%), Gaps = 6/139 (4%) Frame = +3 Query: 15 SPT*RTRHLP*NQPPPRTEYRHFHESIARRGSHRVGPTYPRRVNDGPP------RASFRE 176 SP + R+ P PPP+ RR S P RRV+ PP + R Sbjct: 616 SPPIQRRYSP--SPPPKRRTASPPPPPKRRASP--SPPPKRRVSHSPPPKQRSPTVTKRR 671 Query: 177 NAGLXXXXXXXXXXXXXXXXXXXXXXDARHGELPQRELRGRQAQALVRRGAGPMAQGRRR 356 + L + RH P+ + VRRGA QGR Sbjct: 672 SPSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGR-- 729 Query: 357 RQEPQAPLPLHRQPRQAIR 413 Q+P P R R+ R Sbjct: 730 ----QSPSPSTRPIRRVSR 744 Score = 28.1 bits (61), Expect = 9.0 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Frame = +2 Query: 20 YLKNSPPSMKSAAPED-----RIPPLP*KYRPSR*PQSRTHVPTTRQRRSPT 160 Y + PP ++A+P P P K R S P + PT +RRSP+ Sbjct: 623 YSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSPTVTKRRSPS 674
>ADDA_HUMAN (P35611) Alpha-adducin (Erythrocyte adducin alpha subunit)| Length = 737 Score = 31.2 bits (69), Expect = 1.1 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = -1 Query: 224 TNSAVSI*HAAPQTGIFPEGSAWGTVVDASWVRGSDSVATSTGDTFM--EVAVFCPRGRL 51 T + ++ AAPQ G+ + G V + +RGSDS+A G+ + ++A F L Sbjct: 99 TTNVPNVYPAAPQGGMAALNMSLGMVTPVNDLRGSDSIAYDKGEKLLRCKLAAFYRLADL 158 Query: 50 ISW 42 W Sbjct: 159 FGW 161
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 31.2 bits (69), Expect = 1.1 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = +2 Query: 35 PPSMKSAAPEDRIPPLP*KYRPSR*PQSRTHVPTTRQRRSPTRFLPGKCR 184 PP +S +P PP+ +Y PS P+ RT P +R + P K R Sbjct: 599 PPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRR 648
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 31.2 bits (69), Expect = 1.1 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Frame = +2 Query: 5 SDPLPYLKNSPPSMKSAAPEDRIPPLP*KYRPSR*PQSRTHVPTT--RQRRSPT 160 S P P PPS + P ++ PLP + P P R H+P RQ R PT Sbjct: 473 SPPPPAYSPPPPSPIYSPPPPQVQPLPPTFSPP--PPRRIHLPPPPHRQPRPPT 524
>KLF4_MOUSE (Q60793) Krueppel-like factor 4 (Gut-enriched krueppel-like factor)| (Epithelial zinc-finger protein EZF) Length = 474 Score = 31.2 bits (69), Expect = 1.1 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 5/60 (8%) Frame = +2 Query: 77 PLP*KYRPSR*PQSRTHVPTTRQRRSPTRFL-----PGKCRSEEPRAI*IRRSWWRGGTA 241 PLP + P P +P Q + P+ PG C EEP+ RRSW R TA Sbjct: 330 PLPPGFHPHPGPNYPPFLPDQMQSQVPSLHYQELMPPGSCLPEEPKPKRGRRSWPRKRTA 389
>ZFY19_HUMAN (Q96K21) Zinc finger FYVE domain-containing protein 19 (MLL partner| containing FYVE domain) Length = 471 Score = 29.6 bits (65), Expect = 3.1 Identities = 21/64 (32%), Positives = 29/64 (45%) Frame = +2 Query: 62 EDRIPPLP*KYRPSR*PQSRTHVPTTRQRRSPTRFLPGKCRSEEPRAI*IRRSWWRGGTA 241 E R+ L + PS+ PQ H P TR + T+ L + +E + I SW GG A Sbjct: 221 EARLAALQGRVLPSQTPQPAHHTPDTRTQAQQTQDLLTQLAAE----VAIDESWKGGGPA 276 Query: 242 GEQQ 253 Q Sbjct: 277 ASLQ 280
>DEND_HUMAN (O94850) Dendrin| Length = 657 Score = 29.3 bits (64), Expect = 4.0 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +3 Query: 276 PQRELRGRQAQALVRRGAGPMAQGRRRRQEPQAPLPLHRQPRQAIRGRR 422 P+R R Q AGP+A+ R R QE + R+ ++ R RR Sbjct: 28 PRRPWASRVLQEATNWRAGPLAEVRAREQEKRKAASQEREAKETERKRR 76
>TENS1_BOVIN (Q9GLM4) Tensin-1| Length = 1715 Score = 29.3 bits (64), Expect = 4.0 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +3 Query: 270 ELPQRELRGRQAQALVRRGAGPMAQGRRRRQEPQAPLPLHRQ 395 +LP RG ++ V+RG Q ++++Q+ Q P P RQ Sbjct: 628 QLPPAPARGGSSREAVQRGLNSWQQQQQQQQQQQQPRPPPRQ 669
>PHBC_RALEU (P23608) Poly-beta-hydroxybutyrate polymerase (EC 2.3.1.-)| (Poly(3-hydroxybutyrate) polymerase) (PHB polymerase) (PHB synthase) (Poly(3-hydroxyalkanoate) polymerase) (PHA polymerase) (PHA synthase) (Polyhydroxyalkanoic acid synthase) Length = 589 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/55 (25%), Positives = 25/55 (45%) Frame = -1 Query: 167 GSAWGTVVDASWVRGSDSVATSTGDTFMEVAVFCPRGRLISWKVASSLGRGGDPS 3 GS W ++ + +R + +G + V FC G ++S +A RG P+ Sbjct: 286 GSTWDDYIEHAAIRAIEVARDISGQDKINVLGFCVGGTIVSTALAVLAARGEHPA 340
>EXTN2_ARATH (Q9M1G9) Extensin-2 precursor (AtExt2) (Cell wall| hydroxyproline-rich glycoprotein 1) (HRGP1) Length = 743 Score = 28.5 bits (62), Expect = 6.9 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = +2 Query: 2 RSDPLPYLKNSPPSMKSAAP--EDRIPPLP*KYRPSR*PQSRTHVPTTR 142 ++ PLPY+ +SPP + AP E + PP P Y P T+ P+ + Sbjct: 45 KTPPLPYVDSSPPPTYTPAPEVEYKSPPPPYVYSS---PPPPTYSPSPK 90
>V70K_TYMVA (P20131) 69 kDa protein| Length = 628 Score = 28.5 bits (62), Expect = 6.9 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 7/71 (9%) Frame = -1 Query: 356 TPTTLRHRPSASSDECLGLTPPKFSL-------R*LSMAGVPAAPLPSLLSTNSAVSI*H 198 TP+T R P S CL + P+ +L R + P A LP + T+ I H Sbjct: 364 TPSTKRRLPRPSEPNCLPSSLPEATLAPSYRHRRSHPLLPNPPAALPPIAYTSGRGKIHH 423 Query: 197 AAPQTGIFPEG 165 + P+ + EG Sbjct: 424 SLPKGALPKEG 434
>YFGG_SCHPO (O13854) Hypothetical serine/threonine-rich protein C19G12.16c| precursor Length = 670 Score = 28.5 bits (62), Expect = 6.9 Identities = 13/46 (28%), Positives = 24/46 (52%) Frame = -1 Query: 164 SAWGTVVDASWVRGSDSVATSTGDTFMEVAVFCPRGRLISWKVASS 27 S++ T+ + S + S S T+TG + + F P + S ++SS Sbjct: 197 SSFSTITNTSMIPSSSSFTTTTGSPYYNTSSFLPSSVISSASLSSS 242
>RAD52_MAGGR (Q8NK72) DNA repair and recombination protein rhm52 (RAD52 homolog)| Length = 565 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 14 LPYLKNSPPSMKSAAPEDRIPPLP*KYRPS 103 LP +K P + SAAP +PPLP K S Sbjct: 203 LPPVKPEPSNTASAAPHPPLPPLPGKLSDS 232
>CD2L7_HUMAN (Q9NYV4) Cell division cycle 2-related protein kinase 7 (EC| 2.7.11.22) (CDC2-related protein kinase 7) (Cdc2-related kinase, arginine/serine-rich) (CrkRS) Length = 1490 Score = 28.5 bits (62), Expect = 6.9 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +2 Query: 11 PLPYLKNSPPSMKSAAPEDRIPPLP 85 PLP + + PP + + P + PPLP Sbjct: 528 PLPTIASPPPPLPTTTPPPQTPPLP 552
>POLS_SINDO (P27285) Structural polyprotein (p130) [Contains: Capsid protein| (EC 3.4.21.-) (Coat protein) (C); p62 (E3/E2); E3 protein (Spike glycoprotein E3); E2 envelope glycoprotein (Spike glycoprotein E2); 6K protein; E1 envelope glycoprotein (Spike g Length = 1245 Score = 28.1 bits (61), Expect = 9.0 Identities = 12/40 (30%), Positives = 20/40 (50%) Frame = +2 Query: 59 PEDRIPPLP*KYRPSR*PQSRTHVPTTRQRRSPTRFLPGK 178 P R PP K P + P+ + P ++++ P + PGK Sbjct: 63 PRPRPPPRQKKQAPKQPPKPKKPKPQEKKKKQPAKTKPGK 102
>NOTC3_HUMAN (Q9UM47) Neurogenic locus notch homolog protein 3 precursor (Notch| 3) [Contains: Notch 3 extracellular truncation; Notch 3 intracellular domain] Length = 2321 Score = 28.1 bits (61), Expect = 9.0 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +3 Query: 330 GPMAQGRRRRQEPQAPLP 383 GP A+GRRRR+ P +P P Sbjct: 2 GPGARGRRRRRRPMSPPP 19
>LOXL1_MOUSE (P97873) Lysyl oxidase homolog 1 precursor (EC 1.4.3.-) (Lysyl| oxidase-like protein 1) (Lysyl oxidase 2) Length = 607 Score = 28.1 bits (61), Expect = 9.0 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = +3 Query: 261 RHGELPQRELRGRQAQALVRRGAGPMAQGRRRRQEPQAPLPLHRQPRQAIRGR-RH 425 + GE R L Q RR G G RRRQ P PLP R +RG+ RH Sbjct: 67 QRGETSSRVLLAGAPQTSQRRSQG----GPRRRQAPSLPLP-GRVGSDTVRGQTRH 117
>YNE1_CAEEL (P30640) Hypothetical protein R08D7.1| Length = 458 Score = 28.1 bits (61), Expect = 9.0 Identities = 19/56 (33%), Positives = 25/56 (44%) Frame = +2 Query: 29 NSPPSMKSAAPEDRIPPLP*KYRPSR*PQSRTHVPTTRQRRSPTRFLPGKCRSEEP 196 NSPP +S D PP + RPS + R + R+S P K + EEP Sbjct: 192 NSPPRNRSRRDSDNSPP---RRRPSSPARRRKDDDLSPPRKSRKIEEPKKIKKEEP 244
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 28.1 bits (61), Expect = 9.0 Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 2/90 (2%) Frame = +2 Query: 2 RSDPLPYLKNSPPSMKSAAPEDRIPPLP*KYRPSR*PQSRTHVPTTRQRRSPTRFLPGKC 181 RS PLP L PP+ P P RPS P +R PT R+RR PT P + Sbjct: 136 RSTPLPELLTGPPAPNLPGPIAVEP----GRRPSPPPSTR---PTYRRRR-PTAATPSRK 187 Query: 182 RSEE--PRAI*IRRSWWRGGTAGEQQGRPP 265 + P+A + G GE G P Sbjct: 188 KKARRGPKAS-------KAGREGELGGGSP 210
>KCNA6_HUMAN (P17658) Potassium voltage-gated channel subfamily A member 6| (Voltage-gated potassium channel subunit Kv1.6) (HBK2) Length = 529 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = +1 Query: 61 RGQNTATSMKVSPVEVATESDPRTHDASTTVPHALPSGKMPV*GAA 198 RG N +VSPV ++ + D S T H + G+M G++ Sbjct: 204 RGGNNGGVSRVSPVSRGSQEEEEDEDDSYTFHHGITPGEMGTGGSS 249
>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 28.1 bits (61), Expect = 9.0 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 12/68 (17%) Frame = +3 Query: 258 ARHGELPQRELRGRQAQALVR-----------RGAGPMAQGRRRRQEPQAP-LPLHRQPR 401 A GEL RE RGR ++ + RG GP +G RR +P R+PR Sbjct: 879 AEGGELGPREERGRPRRSRSKEAPGAPEVRSDRGRGPCPEGGRRHHRRGSPEEAAEREPR 938 Query: 402 QAIRGRRH 425 + R RH Sbjct: 939 RH-RAHRH 945
>TENS1_HUMAN (Q9HBL0) Tensin-1| Length = 1735 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = +3 Query: 270 ELPQRELRGRQAQALVRRGAGPMAQGRRRRQEPQAPLPLHRQPRQAIR 413 +LP +RG ++ V+RG Q ++++Q+P+ P PRQ R Sbjct: 628 QLPPAPVRGGSSREAVQRGLNSWQQQQQQQQQPRPP------PRQQER 669 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.132 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,134,461 Number of Sequences: 219361 Number of extensions: 1288968 Number of successful extensions: 4888 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 4519 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4871 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)