>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 543

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +3

Query: 141 SNLTSSATRCPPLLSPAR----KSAPRSAPGEPFHGRSVSRDETQATAMRGPP 287
           S+  SS  R PP  SPAR    ++ P+++P       S +R   QA+  R PP
Sbjct: 5   SHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPARTPPQASPARAPP 57



 Score = 29.3 bits (64), Expect = 3.9
 Identities = 20/52 (38%), Positives = 23/52 (44%)
 Frame = +3

Query: 117 ATSATTFPSNLTSSATRCPPLLSPARKSAPRSAPGEPFHGRSVSRDETQATA 272
           A+ A T P    S A   PP  SPAR S  R+ P     GRS S      T+
Sbjct: 41  ASPARTPPQ--ASPARAPPPQASPARASPARAPPSRSSSGRSSSARSASTTS 90

>PTPRS_HUMAN (Q13332) Receptor-type tyrosine-protein phosphatase S precursor (EC|
           3.1.3.48) (R-PTP-S) (Protein-tyrosine phosphatase sigma)
           (R-PTP-sigma)
          Length = 1948

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 174 PLLSPARKSAPRSAPGEPFHGRSVSRDETQATAMRGPPR 290
           PL  P +    +  PG+P + R+ +R ET  T    PPR
Sbjct: 511 PLSDPIQVKTQQGVPGQPMNLRAEARSETSITLSWSPPR 549

>ABFA_STRLI (P53627) Alpha-N-arabinofuranosidase (EC 3.2.1.55) (Arabinosidase)|
           (ABF) (Alpha-L-AF)
          Length = 662

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 21/47 (44%), Positives = 25/47 (53%)
 Frame = +3

Query: 150 TSSATRCPPLLSPARKSAPRSAPGEPFHGRSVSRDETQATAMRGPPR 290
           TSS       ++P R+S P SAPG P   R   R  T+A A RG PR
Sbjct: 614 TSSRNVVRYQVTPWRRSPPGSAPGTPAPTR---RRRTRAGASRGAPR 657

>Y1043_HAEIN (P44101) Hypothetical protein HI1043|
          Length = 166

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 119 HLGHHFPLKSHLLRHALPA--ASLASTQIRPQIGAGRAVSWAIC 244
           +L HH   +  LLRH  PA  +++  TQ RP   A   +  A+C
Sbjct: 10  YLSHHHISRRGLLRHVFPATKSTIEKTQSRPPFSAREDLFSAVC 53

>COLA_VIBAL (P43154) Microbial collagenase precursor (EC 3.4.24.3)|
          Length = 814

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = -2

Query: 214 ADLGADLRAGERSGGQRVAEEVRFEGKVVAEVASGKKGRGERFRDYGRGIKVGLPATATA 35
           + +GA+      + G+ +    ++ G   + V S      E++  YGRG  V L A  TA
Sbjct: 278 SSIGAEDEFMAANAGRELGRLTKYTGNASSVVKSQLSRIFEQYEMYGRGDAVWLAAADTA 337

Query: 34  TYSARLS 14
           +Y A  S
Sbjct: 338 SYYADCS 344

>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2161

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 17/42 (40%), Positives = 17/42 (40%)
 Frame = +3

Query: 162 TRCPPLLSPARKSAPRSAPGEPFHGRSVSRDETQATAMRGPP 287
           T  PP L P     P   P EP H   V    TQA    GPP
Sbjct: 527 TPTPPALPPTPTPTPEKDPEEPAHAPPVQSAPTQA----GPP 564

>LUZP1_HUMAN (Q86V48) Leucine zipper protein 1|
          Length = 1076

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 138 PSNLTSSATRCPPLLSPARKSAPRSAPGEPFHGRSVSRDETQ 263
           P+ +TSS T     + P+  S+PR+APGE    R  S    Q
Sbjct: 789 PNKVTSSIT-----IYPSDSSSPRAAPGEALRERHTSTSNIQ 825

>DNMBP_HUMAN (Q6XZF7) Dynamin-binding protein (Scaffold protein Tuba)|
          Length = 1577

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 21/50 (42%), Positives = 24/50 (48%)
 Frame = +3

Query: 123  SATTFPSNLTSSATRCPPLLSPARKSAPRSAPGEPFHGRSVSRDETQATA 272
            SA+  PSN  SS +RCP    P   S PRS          V+RD  Q TA
Sbjct: 1419 SASLNPSNSESSPSRCPS--DPDSTSQPRSG-----DSADVARDVKQPTA 1461

>CWC22_YARLI (Q6C8C5) Pre-mRNA-splicing factor CWC22|
          Length = 954

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +3

Query: 183 SPARKSAPRSAPGEPFHGRSVSRDETQATAMRGPPR 290
           SP  +S PRS P      RS+SRD T +     PPR
Sbjct: 817 SPGSRSRPRSRPRSRSRSRSLSRDRTGS-----PPR 847

>SIF1_DROME (P91621) Protein still life, isoform SIF type 1|
          Length = 2072

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -2

Query: 289 LGGPLMAVACVSSRLTDRP*NGSPGADLGADLRAGERSGGQRVAEEVRFEG 137
           +G   +  A  S+ L D   +G PG + GAD    +  GGQ+  ++V   G
Sbjct: 229 VGSGKVVSAVSSTSLYDNVASGGPGTNQGADTLPRQMKGGQQDRQDVANSG 279

>ACM5_SAIBB (Q5IS98) Muscarinic acetylcholine receptor M5|
          Length = 532

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = +3

Query: 114 DATSATTFPSNLTSSATRCPPLLSPARKSAPRSAPGEPFHGRSVSRDETQATAMRG 281
           + T+ +++PS+         P+L    KS  + +PGE F     S +E + T ++G
Sbjct: 299 ELTTCSSYPSSEDEDKPATDPVLQVVYKSQGKESPGEEF-----SAEEAEETFVKG 349

>ACM5_PANTR (Q5IS53) Muscarinic acetylcholine receptor M5|
          Length = 532

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = +3

Query: 114 DATSATTFPSNLTSSATRCPPLLSPARKSAPRSAPGEPFHGRSVSRDETQATAMRG 281
           + T+ +++PS+         P+L    KS  + +PGE F     S +E + T ++G
Sbjct: 299 ELTTCSSYPSSEDEDKPATDPVLQVVYKSQGKESPGEEF-----SAEEAEETFVKG 349

>CYLD_MOUSE (Q80TQ2) Probable ubiquitin carboxyl-terminal hydrolase CYLD (EC|
           3.1.2.15) (Ubiquitin thioesterase CYLD) (Ubiquitin
           specific-processing protease CYLD) (Deubiquitinating
           enzyme CYLD)
          Length = 952

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 9/53 (16%)
 Frame = -2

Query: 211 DLGADLRAGERSGGQRVAEEVRFEGKVVAE-VASG--------KKGRGERFRD 80
           D+G+ ++   RSG ++    VRF G ++AE   SG        ++GRG+ F D
Sbjct: 126 DVGSPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTD 178

>RD23A_HUMAN (P54725) UV excision repair protein RAD23 homolog A (hHR23A)|
          Length = 363

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
 Frame = +3

Query: 123 SATTFPSNLTSSATRCPPLL----SPARKSAPRSAP-----GEPFHGRSVSRDETQATAM 275
           S+T+FP   TS  +  PP      SP+ +SAP ++P       P  G S   ++  +T +
Sbjct: 99  SSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSGSVPSSGSSGREEDAASTLV 158

Query: 276 RG 281
            G
Sbjct: 159 TG 160

>MCF2L_RAT (Q63406) Guanine nucleotide exchange factor DBS (DBL's big sister)|
            (MCF2 transforming sequence-like protein) (OST oncogene)
            (Fragment)
          Length = 937

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -2

Query: 280  PLMAVACVSSRLTDRP*NGSPGADLGADLRAGERSGGQRVAEEV 149
            PL    CVSS L   P  G   +     L A E  GG   AEE+
Sbjct: 870  PLCLEGCVSSSLPKPPEKGKGWSKTSHSLEAPEEDGGWSSAEEL 913

>RFIP1_HUMAN (Q6WKZ4) Rab11 family-interacting protein 1 (Rab11-FIP1)|
           (Rab-coupling protein)
          Length = 1283

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = +3

Query: 147 LTSSATRCPPLLSPARKSAPRSAPGEPFHGRSVSRDETQATAMRGPPRC 293
           L    + CP  L+PA   A  ++ GEP         E ++    GP  C
Sbjct: 827 LVEGHSSCPQELNPAWSVAGNASDGEPPESPHAEDSERESVTTPGPATC 875

>MSN2_YEAST (P33748) Zinc finger protein MSN2 (Multicopy suppressor of SNF1|
           protein 2)
          Length = 704

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 65  NAAPVVPKPLSPSFLP*RHLGHHFPLKSHLLRHALPAASL 184
           N AP+ P   S + L   H  HHFP + H   ++   +SL
Sbjct: 538 NMAPLSPASSSSTSLATNHFYHHFPQQGHHTMNSKIGSSL 577

>CYLD_HUMAN (Q9NQC7) Probable ubiquitin carboxyl-terminal hydrolase CYLD (EC|
           3.1.2.15) (Ubiquitin thioesterase CYLD)
           (Ubiquitin-specific-processing protease CYLD)
           (Deubiquitinating enzyme CYLD)
          Length = 956

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 9/53 (16%)
 Frame = -2

Query: 211 DLGADLRAGERSGGQRVAEEVRFEGKVVAE-VASG--------KKGRGERFRD 80
           D+G  ++   RSG ++    VRF G ++AE   SG        ++GRG+ F D
Sbjct: 126 DVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTD 178


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,518,114
Number of Sequences: 219361
Number of extensions: 849787
Number of successful extensions: 3382
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3368
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)