>PKP3_HUMAN (Q9Y446) Plakophilin-3|
          Length = 797

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -1

Query: 416 LRNLAKNFNQHSKNXRFHSKQSLSKLVAKLPVQIGRREPPFHV 288
           L  L +N +++++N    S + +S L+ KLP  +G + PP  V
Sbjct: 675 LTGLIRNLSRNARNKDEMSTKVVSHLIEKLPGSVGEKSPPAEV 717

>PKP3_MOUSE (Q9QY23) Plakophilin-3|
          Length = 797

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -1

Query: 416 LRNLAKNFNQHSKNXRFHSKQSLSKLVAKLPVQIGRREPPFHV 288
           L  L +N +++++N    S + +S L+ KLP  +G + PP  V
Sbjct: 675 LTGLIRNLSRNARNKDEMSTKVVSHLIEKLPGSVGEKCPPAEV 717

>MMPL3_MYCTU (O53657) Putative membrane protein mmpL3|
          Length = 944

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
 Frame = +3

Query: 177  AAGDPRFPIALLAVAAGDGDQGTRI-----AAAAYLKIFARRNMEGGLSSSDLYR 326
            AAGDP  P A L +   DGD          A     K   RR   G LS+ DL R
Sbjct: 885  AAGDPAEPTAALPIIRSDGDDSEAATEQLNARGTSDKTRQRRRGGGALSAQDLLR 939

>TBC2_CHLRE (Q8VXP3) Tbc2 translation factor, chloroplast precursor|
          Length = 1115

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 10/49 (20%)
 Frame = +3

Query: 147  AATAGLDRISAAGDPRFPIALLAVAAGDG----------DQGTRIAAAA 263
            AA AG    +AAGD    ++ +  AAGDG          D GT   AAA
Sbjct: 933  AAPAGASSAAAAGDSPAALSAVPAAAGDGALVPSFMSIDDDGTAAVAAA 981

>TI50C_DROME (Q9W4V8) Import inner membrane translocase subunit TIM50-C,|
           mitochondrial precursor
          Length = 428

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 225 GDGDQGTRIAAAAYLKIFARRNMEGGLSSSDLYREFRDQLAQ 350
           G+ D G  +   A+LKI A+ N++        YR+F D + Q
Sbjct: 350 GNDDDGQLLDLIAFLKIIAQNNVDDVREVLHYYRQFDDPINQ 391

>CP6D3_MUSDO (Q964Q7) Cytochrome P450 6d3 (EC 1.14.-.-) (CYPVID3) (Pyrethroid|
           resistance cytochrome P450)
          Length = 520

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +3

Query: 270 KIFARRNMEGGLSSSDLYREFRDQLAQALLRVEPXILRVLIEVFRQVAEKD 422
           K+F R+    GL   DLY +F++Q+    L  +P +L    E+ RQ+   D
Sbjct: 43  KVF-RKERPFGLVMYDLYEKFQEQVVGIYLFFKPALLIRDAELARQILTSD 92

>VP4_ROTB9 (Q08010) Outer capsid protein VP4 (Hemagglutinin) (Outer layer|
           protein VP4) [Contains: Outer capsid protein VP8; Outer
           capsid protein VP5]
          Length = 770

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
 Frame = +3

Query: 102 SLLAATLSADKTSVDAATAGLDRISAAGDPRFPIALLAVAAGD-GDQGTRIAAAAYLKIF 278
           S +   LS   TSV  A++     S   +        +VA  D   Q +RIA+   +K F
Sbjct: 558 STITEELSDAATSVSRASSIRSNASVWNNLVDTRTQTSVATNDIATQTSRIASKLRVKEF 617

Query: 279 ARRNMEGGLSSSDLYREFRDQLAQALLRVEPXILRVLI 392
           A +  EGGLS +D+           +  V+P IL  +I
Sbjct: 618 ATQT-EGGLSFNDISAAVLKTKIDKIETVQPKILPTII 654


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,125,869
Number of Sequences: 219361
Number of extensions: 546315
Number of successful extensions: 1872
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1871
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)