>FOXQ1_HUMAN (Q9C009) Forkhead box protein Q1 (Hepatocyte nuclear factor 3|
           forkhead homolog 1) (HNF-3/forkhead-like protein 1)
           (HFH-1)
          Length = 403

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
 Frame = -3

Query: 283 EEDPEKDGIGGGDTRNPQRLAGSRRTGAREQC*RISADPEVADHRICTP----EQLPAGG 116
           ++  + +G GG D  +P   AG    G+   C   +A+   A      P    EQ   GG
Sbjct: 15  KQGSDLEGAGGSDAPSPLSAAGDDSLGSDGDC---AANSPAAGGGARDPPGDGEQSAGGG 71

Query: 115 PRPHGSIPRAFSSARTLGES*EG*ARVGAGESG 17
           P    +IP A ++A     +  G A  GAG +G
Sbjct: 72  PGAEEAIPAAAAAAVVAEGAEAGAAGPGAGGAG 104

>RPA1_TRYBB (P16355) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)|
          Length = 1744

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -3

Query: 289  IHEEDPEKDGIGGGDTRNPQRLAGSRRTGAREQC*RISADPEVAD 155
            +H +  +  GI G DT  PQR  GS  +G  +     ++D E AD
Sbjct: 1411 LHSDGTDTRGIAGSDTGGPQRRRGSVESGRGDD----ASDSEAAD 1451

>PRP1_HUMAN (P04280) Basic salivary proline-rich protein 1 precursor (Salivary|
           proline-rich protein) [Contains: Basic peptide IB-6;
           Peptide P-H]
          Length = 392

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 76  PRRKPEGSIHEGGDRRRGAAPACRSGGRPPQ 168
           P  KP+G   +GG+R +G  P  +  G PPQ
Sbjct: 236 PPGKPQGPPQQGGNRPQGPPPPGKPQGPPPQ 266



 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 76  PRRKPEGSIHEGGDRRRGAAPACRSGGRPPQ 168
           P  KP+G   +GG++ +G  P  +  G PPQ
Sbjct: 175 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 205



 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 76  PRRKPEGSIHEGGDRRRGAAPACRSGGRPPQ 168
           P  KP+G   +GG++ +G  P  +  G PPQ
Sbjct: 114 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 144



 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 76  PRRKPEGSIHEGGDRRRGAAPACRSGGRPPQ 168
           P  KP+G   +GG++ +G  P  +  G PPQ
Sbjct: 53  PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 83

>GTI1_SCHPO (O14367) Gluconate transport inducer 1|
          Length = 720

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = +3

Query: 12  LFPLSPAPTLAYPSQLSPRVLAEEKARGIDP*GRGPPAGSCSGVQIRWSATSGS 173
           L P SP  + A+PS  S   L   K  G     + PP+ S S   +  ++TS +
Sbjct: 178 LSPTSPTTSAAFPSSFSSLPLVSSKPTGTPFVPKSPPSSSPSTTNVSNASTSSA 231

>PRB2_HUMAN (P02812) Basic salivary proline-rich protein 2 (Salivary|
           proline-rich protein) (Con1 glycoprotein) [Contains:
           Basic peptide P-F] (Fragment)
          Length = 382

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 76  PRRKPEGSIHEGGDRRRGAAPACRSGGRPPQDLLKSFS 189
           P  KP+G   +GG++ +G  P  +  G PPQ   KS S
Sbjct: 225 PPGKPQGPPPQGGNKSQGPPPPGKPQGPPPQGGSKSRS 262



 Score = 29.6 bits (65), Expect = 4.1
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 76  PRRKPEGSIHEGGDRRRGAAPACRSGGRPPQDLLKSFS 189
           P  KP+G   +GG++ +G  P  +  G PPQ   KS S
Sbjct: 287 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRS 324



 Score = 29.3 bits (64), Expect = 5.4
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 76  PRRKPEGSIHEGGDRRRGAAPACRSGGRPPQDLLKSFS 189
           P  KP+G   +GG++ +G  P  +  G PPQ   KS S
Sbjct: 163 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQS 200



 Score = 29.3 bits (64), Expect = 5.4
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 76  PRRKPEGSIHEGGDRRRGAAPACRSGGRPPQDLLKSFS 189
           P  KP+G   +GG++ +G  P  +  G PPQ   KS S
Sbjct: 101 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRS 138



 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 76  PRRKPEGSIHEGGDRRRGAAPACRSGGRPPQ 168
           P  KP+G   +GG++ +G  P  +  G PPQ
Sbjct: 40  PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 70

>PROB_AZOSE (Q5P7Z3) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 371

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +1

Query: 88  PEGSIHEGGDRRRGAAPACRSGG 156
           P G +  GG+  RGAA ACRS G
Sbjct: 301 PVGVVEVGGEFERGAAVACRSAG 323

>CUT2_CAEEL (P34682) Cuticlin-2 precursor|
          Length = 231

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +2

Query: 14  LPTLTRPH---PRLSLSALA*GSCRGESPRDRSMRAGTAGGELLRRADPVVGH 163
           LP L  P    PRLSL +L  G C G +P   +  A  AGG     A PV G+
Sbjct: 45  LPPLQLPRFELPRLSLPSLG-GGCGGPAPCAAAPIAAPAGGYATAPAAPVGGY 96

>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1459

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = +1

Query: 64  LGFLPRRKPEGSIHEGGDRRRGAAPACRSGGRPPQDLLKSFSIAPLLLFSDSRP 225
           L  LP  KP  +I+  G+RR   +       RPP  L  S  + PLLL +   P
Sbjct: 501 LSGLPSSKPRYAINHSGERRPSISQ------RPPTRLTPSVFVPPLLLGNIENP 548

>PRPE_HUMAN (P02811) Basic proline-rich peptide P-E (IB-9)|
          Length = 61

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 76  PRRKPEGSIHEGGDRRRGAAPACRSGGRPPQ 168
           P  KP+G   +GG+R +G  P  +  G PPQ
Sbjct: 23  PPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQ 53

>YB3_XENLA (Q00436) B box-binding protein (Protein YB3)|
          Length = 305

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -3

Query: 112 RPHGSIPRAFSSARTLGES*EG*ARVGAGESGKSVEE 2
           RP+G  P+ +S+    GES EG    GAGE G+ V +
Sbjct: 180 RPYGRRPQ-YSNVPVQGESAEGAESQGAGEQGRPVRQ 215

>SYTL2_HUMAN (Q9HCH5) Synaptotagmin-like protein 2 (Exophilin-4)|
          Length = 895

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = -3

Query: 382 QNGFAINNSGKVAFNRTFREKILHQIPACDLIHEEDPEKDGIGGGDTRNPQR 227
           +N   IN     +   T  E +L + PA +L H  +PE   + GG +R+ Q+
Sbjct: 420 ENSPTINEPKDKSSELTRLESVLPRSPADELSHCVEPEPSQVPGGSSRDRQQ 471

>M3K1_MOUSE (P53349) Mitogen-activated protein kinase kinase kinase 1 (EC|
           2.7.11.25) (MAPK/ERK kinase kinase 1) (MEK kinase 1)
           (MEKK 1)
          Length = 1493

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 20/59 (33%), Positives = 24/59 (40%)
 Frame = -3

Query: 202 AREQC*RISADPEVADHRICTPEQLPAGGPRPHGSIPRAFSSARTLGES*EG*ARVGAG 26
           A   C   S  PE AD         PA GP P G+  R  S +  L  + +  AR  AG
Sbjct: 87  ASPPCPSTSPSPEPADAAAGASRFQPAAGPPPPGAASRCGSHSAELAAARDSGARSPAG 145

>PRPP_HUMAN (P81489) Salivary proline-rich protein II-1 (Fragment)|
          Length = 174

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 76  PRRKPEGSIHEGGDRRRG-AAPACRSGGRPPQ 168
           P  KP+G   +GGD+ +G   P  +  GRPPQ
Sbjct: 36  PPGKPQGPPPQGGDQSQGPPPPPGKPEGRPPQ 67

>OTRA_STRRM (Q55002) Oxytetracycline resistance protein|
          Length = 663

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -1

Query: 288 FTRRIPKRTESEGEILAIRRGW-PGVGEQEQGSNAEG 181
           F +R+P  T+ EG  LA  RG+ P VG+       EG
Sbjct: 610 FNQRVPGLTQGEGVFLAEHRGYRPAVGQPPVRPRPEG 646

>AGUA_ERWCT (Q6CZ80) Putative agmatine deiminase (EC 3.5.3.12) (Agmatine|
           iminohydrolase)
          Length = 368

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -3

Query: 328 REKILHQIPACDLIHEEDPEKDGIGGGDTRNPQRLAGSRRTGA 200
           RE  + ++PA   +H    E  G+  GD    +RLAGSR  G+
Sbjct: 265 RELKIWKLPAPGPLHATKEEAQGVDSGDA--VERLAGSRLAGS 305

>PRP5_HUMAN (P04281) Basic proline-rich peptide IB-1|
          Length = 96

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 76  PRRKPEGSIHEGGDRRRGAAPACRSGGRPPQ 168
           P  KP+G   +GG++ +G  P  +  G PPQ
Sbjct: 58  PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 88

>PRB3_HUMAN (Q04118) Basic salivary proline-rich protein 3 precursor (Parotid|
           salivary glycoprotein G1) (Proline-rich protein G1)
          Length = 309

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +1

Query: 85  KPEGSIHEGGDRRRGAAP-ACRSGGRPPQD 171
           KPEGS  +GG++ RG  P   +  G PPQ+
Sbjct: 224 KPEGSPSQGGNKPRGPPPHPGKPQGPPPQE 253


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,158,753
Number of Sequences: 219361
Number of extensions: 1499994
Number of successful extensions: 4993
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4988
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)