>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 93      gggatcgatccatgagggcgg 113
               |||||||||||||||||||||
Sbjct: 1425735 gggatcgatccatgagggcgg 1425715

>gb|AC112230.5| Homo sapiens BAC clone RP11-85D18 from 2, complete sequence
          Length = 196480

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 15    ttcccactctcacccgccccc 35
             |||||||||||||||||||||
Sbjct: 80074 ttcccactctcacccgccccc 80054

>ref|XM_429433.1| PREDICTED: Gallus gallus LOC416464 (LOC416464), mRNA
          Length = 850

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 167 aggatctgctgaaatccttc 186
           ||||||||||||||||||||
Sbjct: 475 aggatctgctgaaatccttc 456

>ref|XM_957463.1| Neurospora crassa OR74A hypothetical protein (NCU06294.1) partial
           mRNA
          Length = 9492

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 442 tggttcaagactgtcattca 461
           ||||||||||||||||||||
Sbjct: 967 tggttcaagactgtcattca 986

>ref|XM_326148.1| Neurospora crassa OR74A hypothetical protein (NCU06294.1) partial
           mRNA
          Length = 9492

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 442 tggttcaagactgtcattca 461
           ||||||||||||||||||||
Sbjct: 967 tggttcaagactgtcattca 986

>gb|AC110102.6| Rattus norvegicus 4 BAC CH230-209C7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 219273

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 106    gagggcggggaccgccggcggggagctg 133
              ||||||||||| |||| |||||||||||
Sbjct: 120744 gagggcggggagcgcccgcggggagctg 120771

>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     cttgccgaggagaaagcccg 91
              ||||||||||||||||||||
Sbjct: 786286 cttgccgaggagaaagcccg 786305

>gb|AC087102.3| Rattus norvegicus strain Brown Norway clone RP31-331N5, complete sequence
          Length = 151673

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 106    gagggcggggaccgccggcggggagctg 133
              ||||||||||| |||| |||||||||||
Sbjct: 116184 gagggcggggagcgcccgcggggagctg 116157

>emb|CR847512.10| Zebrafish DNA sequence from clone DKEYP-13G11 in linkage group 9,
              complete sequence
          Length = 169581

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    attgttgattgcaaagccat 378
              ||||||||||||||||||||
Sbjct: 135609 attgttgattgcaaagccat 135628

>gb|AF489529.1| Rattus norvegicus caveolin 1 gene, promoter region and partial cds
          Length = 6809

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 106  gagggcggggaccgccggcggggagctg 133
            ||||||||||| |||| |||||||||||
Sbjct: 2428 gagggcggggagcgcccgcggggagctg 2401

>emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 267509

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   ttgcaaagccattctgggga 386
             ||||||||||||||||||||
Sbjct: 94108 ttgcaaagccattctgggga 94127

>ref|NM_166704.1| Drosophila melanogaster zipper CG15792-RB, transcript variant B
            (zip), mRNA
          Length = 6430

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   ttcttgccgaggagaaagcc 89
            ||||||||||||||||||||
Sbjct: 4684 ttcttgccgaggagaaagcc 4703

>ref|NM_079136.2| Drosophila melanogaster zipper CG15792-RA, transcript variant A
            (zip), mRNA
          Length = 6494

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   ttcttgccgaggagaaagcc 89
            ||||||||||||||||||||
Sbjct: 4748 ttcttgccgaggagaaagcc 4767

>gb|AC023173.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-11G22, complete
              sequence
          Length = 203451

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 106    gagggcggggaccgccggcggggagctg 133
              |||||||||||  |||||||||||||||
Sbjct: 106228 gagggcggggagtgccggcggggagctg 106201

>ref|NM_001014553.1| Drosophila melanogaster zipper CG15792-RC, transcript variant C
            (zip), mRNA
          Length = 6310

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   ttcttgccgaggagaaagcc 89
            ||||||||||||||||||||
Sbjct: 4564 ttcttgccgaggagaaagcc 4583

>ref|NM_001014552.1| Drosophila melanogaster zipper CG15792-RD, transcript variant D
            (zip), mRNA
          Length = 6374

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   ttcttgccgaggagaaagcc 89
            ||||||||||||||||||||
Sbjct: 4628 ttcttgccgaggagaaagcc 4647

>emb|BX248308.11| Zebrafish DNA sequence from clone DKEY-247M21 in linkage group 21,
             complete sequence
          Length = 171606

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     actcttccacactcttccca 20
             ||||||||||||||||||||
Sbjct: 95914 actcttccacactcttccca 95895

>gb|AC007884.5|AC007884 Drosophila melanogaster, chromosome 2R, region 60F-60F, BAC clone
              BACR08I14, complete sequence
          Length = 190616

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     ttcttgccgaggagaaagcc 89
              ||||||||||||||||||||
Sbjct: 153580 ttcttgccgaggagaaagcc 153561

>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 106    gagggcggggaccgccggcggggagctg 133
              ||||||||||| |||| |||||||||||
Sbjct: 322432 gagggcggggagcgcccgcggggagctg 322405

>gb|AF124227.1|AF124227 Mus musculus caveolin-1 gene, promoter region and 5' UTR, partial
            sequence
          Length = 1311

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 106  gagggcggggaccgccggcggggagctg 133
            |||||||||||  |||||||||||||||
Sbjct: 1086 gagggcggggagtgccggcggggagctg 1059

>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete
              sequence
          Length = 343833

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     ttcttgccgaggagaaagcc 89
              ||||||||||||||||||||
Sbjct: 305884 ttcttgccgaggagaaagcc 305865

>dbj|AP001359.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-820L6, complete
              sequences
          Length = 221535

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 423    accctgagtaggaattgttt 442
              ||||||||||||||||||||
Sbjct: 220252 accctgagtaggaattgttt 220271

>dbj|AP000755.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-716H6, complete
             sequences
          Length = 152306

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   accctgagtaggaattgttt 442
             ||||||||||||||||||||
Sbjct: 49964 accctgagtaggaattgttt 49983

>gb|U35816.1|DMU35816 Drosophila melanogaster nonmuscle myosin-II heavy chain (zip) gene,
             complete cds
          Length = 21711

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    ttcttgccgaggagaaagcc 89
             ||||||||||||||||||||
Sbjct: 19153 ttcttgccgaggagaaagcc 19172

>gb|M35012.1|DROMYONMA D.melanogaster non-muscle myosin heavy chain mRNA
          Length = 6338

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   ttcttgccgaggagaaagcc 89
            ||||||||||||||||||||
Sbjct: 4592 ttcttgccgaggagaaagcc 4611


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,548,807
Number of Sequences: 3902068
Number of extensions: 3548807
Number of successful extensions: 78692
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78609
Number of HSP's gapped (non-prelim): 83
length of query: 474
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 452
effective length of database: 17,147,199,772
effective search space: 7750534296944
effective search space used: 7750534296944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)