ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl55h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y2126_MYCBO (P64946) Hypothetical protein Mb2126 precursor 29 3.2
2Y2100_MYCTU (P64945) Hypothetical protein Rv2100/MT2160 precursor 29 3.2

>Y2126_MYCBO (P64946) Hypothetical protein Mb2126 precursor|
          Length = 550

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -1

Query: 339 DRNPSRPLSPESPSFCILSPNP 274
           D  PSRPL+PE+  F  L+P+P
Sbjct: 322 DEPPSRPLTPETTLFEALTPDP 343



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>Y2100_MYCTU (P64945) Hypothetical protein Rv2100/MT2160 precursor|
          Length = 550

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -1

Query: 339 DRNPSRPLSPESPSFCILSPNP 274
           D  PSRPL+PE+  F  L+P+P
Sbjct: 322 DEPPSRPLTPETTLFEALTPDP 343


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,386,916
Number of Sequences: 219361
Number of extensions: 438867
Number of successful extensions: 1842
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1840
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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