Clone Name | bastl55h09 |
---|---|
Clone Library Name | barley_pub |
>ALF_ECHMU (Q9GP32) Fructose-bisphosphate aldolase (EC 4.1.2.13)| Length = 363 Score = 31.6 bits (70), Expect = 0.87 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Frame = -2 Query: 169 EPVTRLLPEEGVLPGVK-----TICSGGSESCACEGRDSSARRPVLLLSQYFS 26 +P LL E GVLPG+K G ++ C +G D+ A+R +QY++ Sbjct: 92 KPFVELLRERGVLPGIKVDLGVVPLGGTADECTTQGLDNLAQR----CAQYYN 140
>NUOG_STRCO (Q9XAR0) NADH-quinone oxidoreductase chain G (EC 1.6.99.5) (NADH| dehydrogenase I, chain G) (NDH-1, chain G) Length = 843 Score = 28.5 bits (62), Expect = 7.4 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Frame = +3 Query: 216 DSAGQKMGCTVSLRLEKR--LTI*VTCRTSMILRALLLS*TEPLVEHGILVLLVTDDP 383 D AG C V + +++ + +TC M+++ L S +HG++ LL+ + P Sbjct: 60 DPAGACRQCIVEVEGQRKPMASCTITCTDGMVVKTQLTSPVAEKAQHGVMELLLINHP 117
>PLDZ1_ARATH (P58766) Phospholipase D zeta (EC 3.1.4.4) (AtPLDzeta) (PLD zeta)| Length = 820 Score = 28.5 bits (62), Expect = 7.4 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +3 Query: 27 EKYWERSSTGRRAELSLPSHAQLSDPPLQIV 119 E+ W + +GRR +S+ A+++ PPL IV Sbjct: 430 EQRWMKQGSGRRYLISMAQLAEITVPPLPIV 460
>GYRB_AQUAE (O67137) DNA gyrase subunit B (EC 5.99.1.3)| Length = 792 Score = 28.1 bits (61), Expect = 9.7 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = -2 Query: 322 SKSARKIIDVRQVT*IVNLFSNRRETVQPIFCPAESAAIAMAAVDLQAT*LEPVTRLLP- 146 +++ ++I++ + + F +R+ ++ I A AA+A A E V R P Sbjct: 347 NQNVKQIVESITYDFLTSYFEKKRDVLKAIVEKAIEAALAREAAKKAK---ELVRRKSPL 403 Query: 145 EEGVLPGVKTICS 107 EEGVLPG CS Sbjct: 404 EEGVLPGKLADCS 416
>ALF_ORYSA (P17784) Fructose-bisphosphate aldolase cytoplasmic isozyme (EC| 4.1.2.13) (Gravity-specific protein GSC 233) Length = 358 Score = 28.1 bits (61), Expect = 9.7 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 11/85 (12%) Frame = -2 Query: 277 IVNLFSNRRETVQPIFCPAESAAIAMAAVDLQAT*LE------PVTRLLPEEGVLPGVK- 119 + N+ NRR + +FC + + + T + P +L E GVLPG+K Sbjct: 45 VENVEENRRSLRELLFCTPGALQYLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKV 104 Query: 118 ---TICSGGSE-SCACEGRDSSARR 56 TI G+E +G D +R Sbjct: 105 DKGTIEVAGTEKETTTQGHDDLGKR 129 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,007,836 Number of Sequences: 219361 Number of extensions: 646432 Number of successful extensions: 2031 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2005 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2031 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)