Clone Information

BLAST Search Result

Clone Name	bastl55h04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RAD18_MOUSE (Q9QXK2) Postreplication repair protein RAD18 (mRAD1...	35	4e-04
2	P100_HCMVA (P08318) Large structural phosphoprotein (pp150) (150...	37	0.028
3	RN146_RAT (Q5XIK5) RING finger protein 146	36	0.037
4	RN146_HUMAN (Q9NTX7) RING finger protein 146 (Dactylidin)	33	0.41
5	ABL1_HUMAN (P00519) Proto-oncogene tyrosine-protein kinase ABL1 ...	33	0.41
6	MURD_MYCPA (Q73YQ6) UDP-N-acetylmuramoylalanine--D-glutamate lig...	33	0.41
7	ICP4_GAHVG (Q02362) Trans-acting transcriptional activator prote...	33	0.41
8	RN146_PONPY (Q5REL3) RING finger protein 146	33	0.41
9	NIFY_AZOBR (P25315) Protein nifY	32	0.53
10	PAD5_MOUSE (Q68ED3) PAP associated domain-containing 5 (EC 2.7.7...	32	0.53
11	MSP1_PLAYO (P13828) Merozoite surface protein 1 precursor (Meroz...	32	0.70
12	RN146_MOUSE (Q9CZW6) RING finger protein 146	32	0.91
13	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	32	0.91
14	SNPC4_HUMAN (Q5SXM2) snRNA-activating protein complex subunit 4 ...	31	1.2
15	HAIR_RAT (P97609) Protein hairless	31	1.2
16	PKNI_MYCTU (P65730) Probable serine/threonine-protein kinase pkn...	30	2.0
17	PKNI_MYCBO (P65731) Probable serine/threonine-protein kinase pkn...	30	2.0
18	ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (T...	30	2.0
19	SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1	30	2.0
20	RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6....	30	2.0
21	CCG8_MOUSE (Q8VHW2) Voltage-dependent calcium channel gamma-8 su...	30	2.0
22	CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel al...	30	2.0
23	HEP_DROME (Q23977) Dual specificity mitogen-activated protein ki...	30	2.0
24	FTSK2_NEIMB (Q9JZG4) DNA translocase ftsK 2	30	2.7
25	FTSK2_NEIMA (Q9JUK9) DNA translocase ftsK 2	30	2.7
26	US02_EHV1K (P32517) US1 protein	30	2.7
27	MAP4_MOUSE (P27546) Microtubule-associated protein 4 (MAP 4)	30	2.7
28	SYIM_CHICK (Q5ZKA2) Isoleucyl-tRNA synthetase, mitochondrial pre...	30	3.5
29	ITF2_CANFA (P15881) Transcription factor 4 (Immunoglobulin trans...	30	3.5
30	ITF2_HUMAN (P15884) Transcription factor 4 (Immunoglobulin trans...	30	3.5
31	MBP_XENLA (P87346) Myelin basic protein (MBP) (Myelin A1 protein)	30	3.5
32	M3K6_HUMAN (O95382) Mitogen-activated protein kinase kinase kina...	30	3.5
33	KCNS1_RAT (O88758) Potassium voltage-gated channel subfamily S m...	30	3.5
34	PANK2_HUMAN (Q9BZ23) Pantothenate kinase 2, mitochondrial precur...	30	3.5
35	IF2_PROMM (Q7V5M4) Translation initiation factor IF-2	30	3.5
36	ATG18_NEUCR (Q96U88) Autophagy-related protein 18	30	3.5
37	TRAG5_ECOLI (Q00184) Conjugal transfer protein traG	29	4.5
38	LRC56_RAT (Q4V8C9) Leucine-rich repeat-containing protein 56	29	4.5
39	MANA_RHOMR (P49425) Mannan endo-1,4-beta-mannosidase (EC 3.2.1.7...	29	4.5
40	GDF7_CERAE (Q9BDW8) Growth/differentiation factor 7 precursor (G...	29	4.5
41	TRXB_STRCO (P52215) Thioredoxin reductase (EC 1.8.1.9) (TRXR)	29	5.9
42	EVL_RAT (O08719) Ena/VASP-like protein (Ena/vasodilator stimulat...	29	5.9
43	COBD_SALTY (P97084) Threonine-phosphate decarboxylase (EC 4.1.1....	29	5.9
44	CO4_MOUSE (P01029) Complement C4 precursor [Contains: Complement...	29	5.9
45	RABE2_HUMAN (Q9H5N1) Rab GTPase-binding effector protein 2 (Raba...	29	5.9
46	ARGA_PSEPU (P0A100) Amino-acid acetyltransferase (EC 2.3.1.1) (N...	29	5.9
47	ARGA_PSEPK (P0A0Z9) Amino-acid acetyltransferase (EC 2.3.1.1) (N...	29	5.9
48	POLG_LMV0 (P31999) Genome polyprotein [Contains: P1 proteinase (...	29	5.9
49	YAZ1_SCHPO (Q10223) Hypothetical protein C13D6.01 in chromosome I	29	5.9
50	PRIA_RHORU (P05445) Primosomal protein N' (EC 3.6.1.-) (ATP-depe...	29	5.9
51	DHTM_METME (P16099) Trimethylamine dehydrogenase (EC 1.5.8.2) (T...	28	7.7
52	OST3A_HUMAN (Q9Y663) Heparan sulfate glucosamine 3-O-sulfotransf...	28	7.7
53	DYRK2_DROME (Q9V3D5) Dual specificity tyrosine-phosphorylation-r...	28	7.7
54	TAF1_DROME (P51123) Transcription initiation factor TFIID subuni...	28	7.7
55	POLG_LMVE (P89876) Genome polyprotein [Contains: P1 proteinase (...	28	7.7
56	MAST1_MOUSE (Q9R1L5) Microtubule-associated serine/threonine-pro...	28	7.7

>RAD18_MOUSE (Q9QXK2) Postreplication repair protein RAD18 (mRAD18Sc)|
          Length = 509

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = -1

Query: 337 PERRCTDPVVTLPERRCTEPAATLPKSRCTEP 242
           P  R  +P  TLP  R  EPA TLP  R  EP
Sbjct: 383 PSMRTDEPAETLPSMRTDEPAETLPLMRADEP 414



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = -3

Query: 233 PERRCTDPVVTLPERRCTEPAATLPKSRCTEP 138
           P  R  +P  TLP  R  EPA TLP  R  EP
Sbjct: 383 PSMRTDEPAETLPSMRTDEPAETLPLMRADEP 414



 Score = 32.7 bits (73), Expect(2) = 0.011
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -3

Query: 224 RCTDPVVTLPERRCTEPAATLPKSRCTEP 138
           R  +P  TLP  R  EPA TLP  R  EP
Sbjct: 374 RTDEPAETLPSMRTDEPAETLPSMRTDEP 402



 Score = 32.7 bits (73), Expect(2) = 4e-04
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -1

Query: 328 RCTDPVVTLPERRCTEPAATLPKSRCTEP 242
           R  +P  TLP  R  EPA TLP  R  EP
Sbjct: 374 RTDEPAETLPSMRTDEPAETLPSMRTDEP 402



 Score = 29.3 bits (64), Expect(2) = 4e-04
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -3

Query: 233 PERRCTDPVVTLPERRCTEPAATLPKSRC 147
           P  R  +P  TLP  R  EPA TLP S C
Sbjct: 395 PSMRTDEPAETLPLMRADEPAETLP-SEC 422



 Score = 29.3 bits (64), Expect(2) = 0.050
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -1

Query: 337 PERRCTDPVVTLPERRCTEPAATLPKSRC 251
           P  R  +P  TLP  R  EPA TLP S C
Sbjct: 395 PSMRTDEPAETLPLMRADEPAETLP-SEC 422



 Score = 25.4 bits (54), Expect(2) = 0.050
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -2

Query: 405 PERRCTEPAATLPKSRCTEP 346
           P  R  EPA TLP  R  EP
Sbjct: 383 PSMRTDEPAETLPSMRTDEP 402



 Score = 24.3 bits (51), Expect(2) = 0.011
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 129 PERRCTDPVVTLPERRCTEPAVPSPT 52
           P  R  +P  TLP  R  EPA   P+
Sbjct: 395 PSMRTDEPAETLPLMRADEPAETLPS 420

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>P100_HCMVA (P08318) Large structural phosphoprotein (pp150) (150 kDa matrix|
            phosphoprotein) (Basic phosphoprotein) (BPP) (Tegument
            protein UL32)
          Length = 1048

 Score = 36.6 bits (83), Expect = 0.028
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
 Frame = +1

Query: 172  AGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPARCIDAPATSPLDRCIDAPARPRL 351
            A S    S NVT+G+    +  A      +S  SP    + +PATSPL     A   P  
Sbjct: 824  ASSKTTSSRNVTSGAGTSSASSARQPSASASVLSPTEDDVVSPATSPLSMLSSASPSPAK 883

Query: 352  GA--STLRQRRRRLGASTLRPGHG 417
             A  S ++ R  R+G  +L+P  G
Sbjct: 884  SAPPSPVKGRGSRVGVPSLKPTLG 907



 Score = 33.5 bits (75), Expect = 0.24
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +2

Query: 68   AGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPARCIDAPATSPLDRCIDAPARPRL 247
            A S    S NVT+G+    +  A      +S  SP    + +PATSPL     A   P  
Sbjct: 824  ASSKTTSSRNVTSGAGTSSASSARQPSASASVLSPTEDDVVSPATSPLSMLSSASPSPAK 883

Query: 248  GA--STLRQRRRRLGASTLR 301
             A  S ++ R  R+G  +L+
Sbjct: 884  SAPPSPVKGRGSRVGVPSLK 903

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>RN146_RAT (Q5XIK5) RING finger protein 146|
          Length = 352

 Score = 36.2 bits (82), Expect = 0.037
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
 Frame = -2

Query: 279 RRRRCRR--VDAPSRGLAGASMHRSSGDVAGASMHRA-GGDVAEESMHRAVAWPERRCTD 109
           RRR+ +R  +D P +G+AG  +   S  V  A    A G D        +V  P    T 
Sbjct: 161 RRRKIKRDIIDIPKKGVAGLRLDCDSNTVNLARESSADGADSGSAHTGASVQLPVPSSTR 220

Query: 108 PVVTLPERRCTEPAVPSPTAGRS 40
           P+ ++ + + T P  PSP AG S
Sbjct: 221 PLTSV-DGQLTSPVTPSPDAGAS 242

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>RN146_HUMAN (Q9NTX7) RING finger protein 146 (Dactylidin)|
          Length = 359

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = -2

Query: 279 RRRRCRR--VDAPSRGLAGASMHRSSGDVAGASMHRAGGDVAEESMHRAVAWPERRCTDP 106
           RRR+ +R  +D P +G+AG  +   +  V  A    A G  +  +   A   P      P
Sbjct: 162 RRRKIKRDIIDIPKKGVAGLRLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRP 221

Query: 105 VVTLPERRCTEPAVPSPTAGRS 40
           + ++ + + T PA PSP A  S
Sbjct: 222 LTSV-DGQLTSPATPSPDASTS 242

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>ABL1_HUMAN (P00519) Proto-oncogene tyrosine-protein kinase ABL1 (EC 2.7.10.2)|
            (p150) (c-ABL) (Abelson murine leukemia viral oncogene
            homolog 1)
          Length = 1130

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 48/159 (30%), Positives = 59/159 (37%), Gaps = 17/159 (10%)
 Frame = +3

Query: 12   PSNHQSRAEMNG---RRSATARPARCID--APATSPLDRCIDAPA-RPRLGASTLRQRRR 173
            P    S  EM+G   RR A     R I   A A +PLD    A + +P  GA       R
Sbjct: 615  PKRSSSFREMDGQPERRGAGEEEGRDISNGALAFTPLDTADPAKSPKPSNGAGVPNGALR 674

Query: 174  RLGASTLRQRHHWIGASTL----------RPGHGSVHRLFGNVAAGSVHRRSGNVTTGSV 323
              G S  R  H W  +STL            G  S  R   + +A  V   + +    SV
Sbjct: 675  ESGGSGFRSPHLWKKSSTLTSSRLATGEEEGGGSSSKRFLRSCSASCVPHGAKDTEWRSV 734

Query: 324  H-RRSGQATARCIDSSATSPPARCIDAPARPRLGASTLR 437
               R  Q+T R  DSS         + PA PR  A   R
Sbjct: 735  TLPRDLQSTGRQFDSSTFG--GHKSEKPALPRKRAGENR 771

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>MURD_MYCPA (Q73YQ6) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 489

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
 Frame = +1

Query: 190 RSGNVTTGSVHRRSGQATARC---------IDSSATSPPARCIDAPATSPLDRCIDAPAR 342
           R G    G +  R GQ   R          +DS     P   +DA A + L RC+D PA 
Sbjct: 246 RLGEPAAGELGVRGGQLVDRAFADDLTLLPVDSIPVPGPVGVLDALAAAALARCVDVPAS 305

Query: 343 P 345
           P
Sbjct: 306 P 306



 Score = 32.7 bits (73), Expect = 0.41
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
 Frame = +2

Query: 86  RSGNVTTGSVHRRSGQATARC---------IDSSATSPPARCIDAPATSPLDRCIDAPAR 238
           R G    G +  R GQ   R          +DS     P   +DA A + L RC+D PA 
Sbjct: 246 RLGEPAAGELGVRGGQLVDRAFADDLTLLPVDSIPVPGPVGVLDALAAAALARCVDVPAS 305

Query: 239 P 241
           P
Sbjct: 306 P 306

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>ICP4_GAHVG (Q02362) Trans-acting transcriptional activator protein ICP4|
           (Immediate-early protein IE175)
          Length = 1415

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 9/129 (6%)
 Frame = +3

Query: 78  CIDAPATSPLDRCIDAPARPRLG-----ASTLRQRRRRLGASTLRQRHHWIGASTLRPGH 242
           C D PA       +  P+  R+       S+ R   R  G  T     H I +    P  
Sbjct: 85  CGDLPAPLTSGPRLTTPSSGRMSELPHTTSSPRSSPRPRGPETSPSNEHIIISPPRNPPS 144

Query: 243 GSVHRLFGNVA----AGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPARCIDAPAR 410
            + HR  G+V+    + S    S + ++ S+   S  +++R   S + SPP    D+ +R
Sbjct: 145 NTTHRNVGHVSRSPSSSSSSSSSSSPSSSSLIVLSSPSSSR---SPSPSPPRPRADSSSR 201

Query: 411 PRLGASTLR 437
           PR G  + R
Sbjct: 202 PRRGRGSNR 210

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>RN146_PONPY (Q5REL3) RING finger protein 146|
          Length = 358

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = -2

Query: 279 RRRRCRR--VDAPSRGLAGASMHRSSGDVAGASMHRAGGDVAEESMHRAVAWPERRCTDP 106
           RRR+ +R  +D P +G+AG  +   +  V  A    A G  +  +   A   P      P
Sbjct: 161 RRRKIKRDIIDIPKKGVAGLRLDCDANTVNLARESSADGADSVSAQSGASVQPLVSSVRP 220

Query: 105 VVTLPERRCTEPAVPSPTAGRS 40
           + ++ + + T PA PSP A  S
Sbjct: 221 LTSV-DGQLTSPATPSPDASTS 241

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>NIFY_AZOBR (P25315) Protein nifY|
          Length = 227

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
 Frame = +2

Query: 8   RPLQPPKQSRDERPAVGDGTAGSVHRRSGNVTTGSVHR-----RSGQATARCIDSSATSP 172
           RPL+P ++SR   P +      + +  +G VTT +  R      SG+  A     +A SP
Sbjct: 120 RPLRPGRRSRLFTPPIPGLAEHAFNVDAGGVTTSTGERIRPPPSSGRGAAANPVGAADSP 179

Query: 173 PARCIDAPATSPL---DRCIDAPARP---RLGASTLRQRRRRLGASTL 298
            +  + A +  P    DR   A +      L A   RQR R + ASTL
Sbjct: 180 ASMTVRARSADPFLAGDRHATASSSTGDVALAARRPRQRCRHVPASTL 227

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>PAD5_MOUSE (Q68ED3) PAP associated domain-containing 5 (EC 2.7.7.-)|
           (Topoisomerase-related function protein 4-2) (TRF4-2)
          Length = 633

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 31/114 (27%), Positives = 43/114 (37%), Gaps = 2/114 (1%)
 Frame = -2

Query: 423 HRAVAWPERRCTEPAATLPKSRCTEPWPGRSVDAPIQW*RCRSVD--APSRRRRCRRVDA 250
           H+  AW  R    P+A+   S  + P P  ++ A        S D  + S  +R R   A
Sbjct: 34  HQPAAWARRASAGPSASPVPSAPSSPRPAAALPA------SESTDPASGSSNKRKRDNKA 87

Query: 249 PSRGLAGASMHRSSGDVAGASMHRAGGDVAEESMHRAVAWPERRCTDPVVTLPE 88
            + GL  + +  S G  AG      GG V     +    W  R     VV L E
Sbjct: 88  STYGLNYSLLQPSGGRAAGGGRADGGGGV-----YSGTPWKRRNYNQGVVGLHE 136



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 28/107 (26%), Positives = 38/107 (35%), Gaps = 2/107 (1%)
 Frame = -1

Query: 355 HRAVAWPERRCTDPVVT-LPERRCT-EPAATLPKSRCTEPWPGRSVDAPIQW*RCRSVDA 182
           H+  AW  R    P  + +P    +  PAA LP S  T+P  G                 
Sbjct: 34  HQPAAWARRASAGPSASPVPSAPSSPRPAAALPASESTDPASG----------------- 76

Query: 181 PSRRRRCRRVDAPSRGLAGASMHRSSGDVAGASMHRAGRAVADRRPF 41
            S  +R R   A + GL  + +  S G  AG      G  V    P+
Sbjct: 77  -SSNKRKRDNKASTYGLNYSLLQPSGGRAAGGGRADGGGGVYSGTPW 122

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>MSP1_PLAYO (P13828) Merozoite surface protein 1 precursor (Merozoite surface|
            antigens) (PMMSA) (230 kDa) (PY230)
          Length = 1772

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 24/77 (31%), Positives = 35/77 (45%)
 Frame = +1

Query: 115  ASTLRPGHGSVHRLFGNVAAGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPARCID 294
            AS+  PG G+     G  A+G+    + N  T +    SG A +    +S  +PPA    
Sbjct: 976  ASSSAPGEGTPSGEAG--ASGTEGATASNAATPAGTSASGSAASNASTTSDVTPPAAAAA 1033

Query: 295  APATSPLDRCIDAPARP 345
             P+TS       APA+P
Sbjct: 1034 VPSTS-----TPAPAQP 1045



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = +2

Query: 47   PAVGDGTAGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPARCIDAPATSPLDRCID 226
            P+   G +G+    + N  T +    SG A +    +S  +PPA     P+TS       
Sbjct: 986  PSGEAGASGTEGATASNAATPAGTSASGSAASNASTTSDVTPPAAAAAVPSTS-----TP 1040

Query: 227  APARP 241
            APA+P
Sbjct: 1041 APAQP 1045

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>RN146_MOUSE (Q9CZW6) RING finger protein 146|
          Length = 359

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
 Frame = -2

Query: 279 RRRRCRR--VDAPSRGLAGASMHRSSGDVAGASMHRA-GGDVAEESMHRAVAWPERRCTD 109
           RRR+ +R  +D P +G+AG  +   +  V  A    A G D        +V       T 
Sbjct: 163 RRRKIKRDIIDIPKKGVAGLRLDCDTNTVNLARESSADGADSGSAQTGASVQLAVPSSTR 222

Query: 108 PVVTLPERRCTEPAVPSPTAGRS 40
           P+ ++ + + T P  PSP AG S
Sbjct: 223 PLTSV-DGQLTSPVTPSPDAGIS 244

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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   DSRPLQPPKQSRDERPAVGDGTAGSVHRRSGNVTTG-SVHRRSGQATARCIDSSATSPPA 178
           DS      ++ R +R  V +G  G   R S + +   S  +R  + + R    S + PPA
Sbjct: 490 DSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKEPSPRRRRRSPSPPPA 549

Query: 179 RCIDAPATSPLDRCIDAPARPRLGASTLRQRRR 277
           R   +P+  P  R   +P+ PR  + +   RRR
Sbjct: 550 RRRRSPSPPPPPRRRRSPSLPRRRSPSPPPRRR 582

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>SNPC4_HUMAN (Q5SXM2) snRNA-activating protein complex subunit 4 (SNAPc subunit|
           4) (snRNA-activating protein complex 190 kDa subunit)
           (SNAPc 190 kDa subunit) (Proximal sequence
           element-binding transcription factor alpha subunit)
           (PSE-binding factor alpha
          Length = 1469

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 24/101 (23%), Positives = 36/101 (35%)
 Frame = -3

Query: 431 SRCTEPWPGRSVDAPSRRRRCRRVDAPSRGLAGASMHRSSGDVAGASMHRAGGDVAEESM 252
           S+C   W          RRR RR     R  + +S   SSG   G+S   +     +E  
Sbjct: 489 SQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSSSSEEDEPE 548

Query: 251 HRAVAWPERRCTDPVVTLPERRCTEPAATLPKSRCTEPWPG 129
                  +R    P   +P+     PA    +   ++PW G
Sbjct: 549 QAQAGEGDRALLSPQYMVPDMDLWVPA----RQSTSQPWRG 585

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>HAIR_RAT (P97609) Protein hairless|
          Length = 1181

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 27/98 (27%), Positives = 36/98 (36%), Gaps = 6/98 (6%)
 Frame = +1

Query: 139 GSVHRLFGNVAAGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPARCIDA--PATS- 309
           G VH L GNV AG      G       ++     T RC      +PP  C  +  PA   
Sbjct: 285 GLVHTL-GNVWAGPGSNSFG-------YQLGPPVTPRCPSPGPPTPPGGCCSSHLPAREG 336

Query: 310 ---PLDRCIDAPARPRLGASTLRQRRRRLGASTLRPGH 414
              P  +C D+P     G     + R + G+    P H
Sbjct: 337 DPGPCRKCQDSPEGSSSGPGESSEERNKAGSRASPPSH 374

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>PKNI_MYCTU (P65730) Probable serine/threonine-protein kinase pknI (EC|
           2.7.11.1)
          Length = 585

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
 Frame = -2

Query: 267 CRR-VDAPSRGLAGASMHRSSGDVAGASMHRAGGDVAEESMHRAVAWPER-RCTDPVVTL 94
           CR   DA +     A   +SSG V  + +  A G+ A    + A  WPE   C +     
Sbjct: 244 CREFADAMNEQAGVAIADQSSGGVDASEVTAAAGEEAYVVDYPAYGWPEAVDCKE----- 298

Query: 93  PERRCTEPAVPSPTAGRSSLLCFGG 19
           P  R   PA P+P    S L    G
Sbjct: 299 PSARAPAPAAPTPQRRGSMLQSAAG 323



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
 Frame = -3

Query: 371 CRR-VDAPSRGLAGASMHRSSGDVAGASMHRAGGDVAEESMHRAVAWPER-RCTDPVVTL 198
           CR   DA +     A   +SSG V  + +  A G+ A    + A  WPE   C +     
Sbjct: 244 CREFADAMNEQAGVAIADQSSGGVDASEVTAAAGEEAYVVDYPAYGWPEAVDCKE----- 298

Query: 197 PERRCTEPAATLPKSR 150
           P  R   PAA  P+ R
Sbjct: 299 PSARAPAPAAPTPQRR 314

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>PKNI_MYCBO (P65731) Probable serine/threonine-protein kinase pknI (EC|
           2.7.11.1)
          Length = 585

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
 Frame = -2

Query: 267 CRR-VDAPSRGLAGASMHRSSGDVAGASMHRAGGDVAEESMHRAVAWPER-RCTDPVVTL 94
           CR   DA +     A   +SSG V  + +  A G+ A    + A  WPE   C +     
Sbjct: 244 CREFADAMNEQAGVAIADQSSGGVDASEVTAAAGEEAYVVDYPAYGWPEAVDCKE----- 298

Query: 93  PERRCTEPAVPSPTAGRSSLLCFGG 19
           P  R   PA P+P    S L    G
Sbjct: 299 PSARAPAPAAPTPQRRGSMLQSAAG 323



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
 Frame = -3

Query: 371 CRR-VDAPSRGLAGASMHRSSGDVAGASMHRAGGDVAEESMHRAVAWPER-RCTDPVVTL 198
           CR   DA +     A   +SSG V  + +  A G+ A    + A  WPE   C +     
Sbjct: 244 CREFADAMNEQAGVAIADQSSGGVDASEVTAAAGEEAYVVDYPAYGWPEAVDCKE----- 298

Query: 197 PERRCTEPAATLPKSR 150
           P  R   PAA  P+ R
Sbjct: 299 PSARAPAPAAPTPQRR 314

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>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional|
           activator IE175) (Alpha-4 protein)
          Length = 1298

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 27/111 (24%), Positives = 40/111 (36%), Gaps = 21/111 (18%)
 Frame = +2

Query: 11  PLQPPKQSRDER--PAVGDGTAGSVHRRSGNVTTGSV---------------HRRSGQAT 139
           P QPP++ R  R  P+    ++ S    S + ++ S                H R  +A 
Sbjct: 161 PAQPPRRRRHGRWRPSASSTSSDSGSSSSSSASSSSSSSDEDEDDDGNDAADHAREARAV 220

Query: 140 ARCIDSSATSPPARCIDAPATSPLDRCIDAP----ARPRLGASTLRQRRRR 280
            R   S+A + P R    P   PL      P      P   A  + +RR R
Sbjct: 221 GRGPSSAAPAAPGRTPPPPGPPPLSEAAPKPRAAARTPAASAGRIERRRAR 271

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>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 25/95 (26%), Positives = 41/95 (43%)
 Frame = +2

Query: 11  PLQPPKQSRDERPAVGDGTAGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPARCID 190
           P  PPK+     P     ++    RRS +++  S HR+    +    ++ +  P  R   
Sbjct: 641 PSPPPKRRVSHSPPPKQRSSPVTKRRSPSLS--SKHRKGSSPSRSTREARSPQPNKR--H 696

Query: 191 APATSPLDRCIDAPARPRLGASTLRQRRRRLGAST 295
           +P+  P      +P   R GAS+  QRR+    ST
Sbjct: 697 SPSPRPRAPQTSSPPPVRRGASSSPQRRQSPSPST 731

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>RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 690

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
 Frame = -2

Query: 252 APSRGLAGASMHRSSGDVAGASMHRAGGDVAE-ESMHRAVAWPERRCTDPVVTLPERRCT 76
           A   G+AG S  R +  V   S H+ GG VA+ ++  RA   P     +           
Sbjct: 27  ASQLGIAGGSRMRKADLVTAISDHQRGGSVADRDAAERAAQAPAAPAAETAPAAASSEDA 86

Query: 75  EPAVPSPTAGRS 40
            PA   P   RS
Sbjct: 87  APAAERPARRRS 98



 Score = 30.4 bits (67), Expect = 2.0
 Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
 Frame = -3

Query: 356 APSRGLAGASMHRSSGDVAGASMHRAGGDVAE-ESMHRAVAWPERRCTDPVVTLPERRCT 180
           A   G+AG S  R +  V   S H+ GG VA+ ++  RA   P     +           
Sbjct: 27  ASQLGIAGGSRMRKADLVTAISDHQRGGSVADRDAAERAAQAPAAPAAETAPAAASSEDA 86

Query: 179 EPAATLPKSR 150
            PAA  P  R
Sbjct: 87  APAAERPARR 96



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 32/98 (32%), Positives = 39/98 (39%)
 Frame = +1

Query: 115 ASTLRPGHGSVHRLFGNVAAGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPARCID 294
           AS L    GS  R    V A S H+R G+V       R+ QA A        +P A    
Sbjct: 27  ASQLGIAGGSRMRKADLVTAISDHQRGGSVADRDAAERAAQAPA--------APAAE--T 76

Query: 295 APATSPLDRCIDAPARPRLGASTLRQRRRRLGASTLRP 408
           APA +  +    A  RP       R+R RR  A T  P
Sbjct: 77  APAAASSEDAAPAAERP------ARRRSRRADADTSAP 108

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>CCG8_MOUSE (Q8VHW2) Voltage-dependent calcium channel gamma-8 subunit|
           (Neuronal voltage-gated calcium channel gamma-8 subunit)
          Length = 423

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 26/86 (30%), Positives = 37/86 (43%)
 Frame = +2

Query: 50  AVGDGTAGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPARCIDAPATSPLDRCIDA 229
           A G G AGS   R  +    ++H    +  A  +  + T PPA    APA +P      A
Sbjct: 343 AAGGGGAGSERDRGSSAGFLTLHNAFPKEAASGVTVTVTGPPAA--PAPAPAP-----PA 395

Query: 230 PARPRLGASTLRQRRRRLGASTLRQR 307
           PA P  G  TL +       +TL ++
Sbjct: 396 PAAPAPG--TLSKEAAASNTNTLNRK 419

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>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 26/90 (28%), Positives = 33/90 (36%)
 Frame = -3

Query: 410  PGRSVDAPSRRRRCRRVDAPSRGLAGASMHRSSGDVAGASMHRAGGDVAEESMHRAVAWP 231
            P  + +   RR R  R   PS+  AGA   R +    G    RAG   AE     A    
Sbjct: 924  PEEAAEREPRRHRAHRHQDPSKECAGAKGERRARHRGGP---RAGPREAESGEEPARRHR 980

Query: 230  ERRCTDPVVTLPERRCTEPAATLPKSRCTE 141
             R    P     E+  TE  AT  ++   E
Sbjct: 981  ARHKAQPAHEAVEKETTEKEATEKEAEIVE 1010

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>HEP_DROME (Q23977) Dual specificity mitogen-activated protein kinase kinase|
            hemipterous (EC 2.7.12.2) (MAPKK)
          Length = 1178

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 7/113 (6%)
 Frame = +1

Query: 118  STLRPGHGSVHRLFGNVAAGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPARCIDA 297
            S +  G G     +  ++A S    +   T+ +     G  T+  +   A+S P   I  
Sbjct: 1022 SVVNNGSGGKSYYYRTLSAASSSSNTSQSTSPTTEPLPGGGTSSFLRRYASSGPGGSIST 1081

Query: 298  PATSPL-------DRCIDAPARPRLGASTLRQRRRRLGASTLRPGHGSVHRLF 435
            P +  +        R  D P R   G S L  R+  L  S   PG   +HR +
Sbjct: 1082 PPSPHILAGLDRRHRSPDPPPRYNRGQSPLLLRKNLLELSGQPPGSPLLHRRY 1134

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>FTSK2_NEIMB (Q9JZG4) DNA translocase ftsK 2|
          Length = 1014

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 10/109 (9%)
 Frame = +2

Query: 8   RPLQPPKQSRDERPAVGDGTAGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPARCI 187
           RP+ P   +R + P   DG     +  SGN   G+    + +A A   +++ T   A  +
Sbjct: 94  RPVPPASANRADVPTASDG-----YSDSGN---GTEEAETEEAEAAEEEAADTEDIATAV 145

Query: 188 DAPATSPLDRCID----------APARPRLGASTLRQRRRRLGASTLRQ 304
                 P DR I           +P RP     TL +  R L ++ LR+
Sbjct: 146 IDNRRIPFDRSIAEGLMPSESEISPVRPVFKEITLEEATRALNSAALRE 194

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>FTSK2_NEIMA (Q9JUK9) DNA translocase ftsK 2|
          Length = 1014

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 10/109 (9%)
 Frame = +2

Query: 8   RPLQPPKQSRDERPAVGDGTAGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPARCI 187
           RP+ P   +R + P   DG     +  SGN   G+    + +A A   +++ T   A  +
Sbjct: 94  RPVPPASANRADVPTASDG-----YSDSGN---GTEEAETEEAEAAEEEAADTEDIATAV 145

Query: 188 DAPATSPLDRCID----------APARPRLGASTLRQRRRRLGASTLRQ 304
                 P DR I           +P RP     TL +  R L ++ LR+
Sbjct: 146 IDNRRIPFDRSIAEGLMPSESEISPVRPVFKEITLEEATRALNSAALRE 194

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>US02_EHV1K (P32517) US1 protein|
          Length = 303

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 29/103 (28%), Positives = 40/103 (38%)
 Frame = -3

Query: 422 TEPWPGRSVDAPSRRRRCRRVDAPSRGLAGASMHRSSGDVAGASMHRAGGDVAEESMHRA 243
           T PW     + P + R     D    G  G S H S+  V   +++R    V + +  R 
Sbjct: 171 TIPWTTVEHNHPLKLRAAGGEDTVV-GECGFSKHSSNSLVHPPTVNRVIYAVVDPARLRE 229

Query: 242 VAWPERRCTDPVVTLPERRCTEPAATLPKSRCTEPWPGRSVDA 114
           +  P R        LP RR +E     P+ R   P P RS  A
Sbjct: 230 IPAPGR-------PLPRRRPSEGGMRAPRRRSRAPAPARSTAA 265



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
 Frame = -1

Query: 412 GLAGASMHRAGGDVAEESMHR---AVAWPER--RCTDPVVTLPERRCTEPAATLPKSRCT 248
           G  G S H +   V   +++R   AV  P R      P   LP RR +E     P+ R  
Sbjct: 196 GECGFSKHSSNSLVHPPTVNRVIYAVVDPARLREIPAPGRPLPRRRPSEGGMRAPRRRSR 255

Query: 247 EPWPGRSVDAPIQW*RCRSVDAPSRRR 167
            P P RS  A     R     AP+ RR
Sbjct: 256 APAPARSTAAAATPPRPGDPRAPAARR 282



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
 Frame = +3

Query: 6   PVPSNHQSRAEMNG--RRSATARPARCIDAPATSPLDRCIDAPARPRLGASTLRQR 167
           P+P    S   M    RRS    PAR   A AT P      APA  R G  T  +R
Sbjct: 236 PLPRRRPSEGGMRAPRRRSRAPAPARSTAAAATPPRPGDPRAPAARRAGDVTWMER 291

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>MAP4_MOUSE (P27546) Microtubule-associated protein 4 (MAP 4)|
          Length = 1125

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 22/92 (23%), Positives = 34/92 (36%)
 Frame = -3

Query: 398 VDAPSRRRRCRRVDAPSRGLAGASMHRSSGDVAGASMHRAGGDVAEESMHRAVAWPERRC 219
           +DAPS      + + P    +      S  + A A++   G D+           PE++ 
Sbjct: 613 IDAPSPLENLEQKETPGSQPSEPCSGVSRQEEAKAAVGVTGNDITTPPNKEPPPSPEKKA 672

Query: 218 TDPVVTLPERRCTEPAATLPKSRCTEPWPGRS 123
                T P +  T  A T P S   +P P  S
Sbjct: 673 KPLATTQPAKTSTSKAKTQPTSLPKQPAPTTS 704

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>SYIM_CHICK (Q5ZKA2) Isoleucyl-tRNA synthetase, mitochondrial precursor (EC|
            6.1.1.5) (Isoleucine--tRNA ligase) (IleRS)
          Length = 1000

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -3

Query: 278  GGDVAEESMHRAVAWPERRCTDPVVTLPERRCTEPAATLPKSRCTEPWPGR 126
            GGD+ EES ++ +A P  +   P      RR T  +++ P  RC +   G+
Sbjct: 951  GGDIREESSYQVIALPTTKAKCPRC----RRYTSDSSSTPCPRCLKVIAGK 997



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -1

Query: 382  GGDVAEESMHRAVAWPERRCTDPVVTLPERRCTEPAATLPKSRCTEPWPGR 230
            GGD+ EES ++ +A P  +   P      RR T  +++ P  RC +   G+
Sbjct: 951  GGDIREESSYQVIALPTTKAKCPRC----RRYTSDSSSTPCPRCLKVIAGK 997

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>ITF2_CANFA (P15881) Transcription factor 4 (Immunoglobulin transcription|
           factor 2) (ITF-2) (Thyroglobulin promoter transcription
           factor TFE)
          Length = 642

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = +3

Query: 150 STLRQRRRRLGASTLRQRHHWIGASTLRP-GHGSVHRLFGNVAAGSVHRRSGNVTTG--S 320
           S +  R  RL  +    R+H +G ST  P GHG +H + G    G++        TG  S
Sbjct: 359 SRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHGDMHGIIGPSHNGAMGGLGSGYGTGLLS 418

Query: 321 VHRRS 335
            +R S
Sbjct: 419 ANRHS 423



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 254 STLRQRRRRLGASTLRQRHHWIGASTLRP-GHGSVHRLFG 370
           S +  R  RL  +    R+H +G ST  P GHG +H + G
Sbjct: 359 SRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHGDMHGIIG 398

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>ITF2_HUMAN (P15884) Transcription factor 4 (Immunoglobulin transcription|
           factor 2) (ITF-2) (SL3-3 enhancer factor 2) (SEF-2)
          Length = 667

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
 Frame = +3

Query: 150 STLRQRRRRLGASTLRQRHHWIGASTLRP-GHGSVHRLFGNVAAGSVHRRSGNVTTG--S 320
           S +  R  RL  +    R+H +G ST  P GHG +H + G    G++        TG  S
Sbjct: 384 SRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHGDMHGIIGPSHNGAMGGLGSGYGTGLLS 443

Query: 321 VHRRS 335
            +R S
Sbjct: 444 ANRHS 448



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 254 STLRQRRRRLGASTLRQRHHWIGASTLRP-GHGSVHRLFG 370
           S +  R  RL  +    R+H +G ST  P GHG +H + G
Sbjct: 384 SRIEDRLERLDDAIHVLRNHAVGPSTAMPGGHGDMHGIIG 423

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>MBP_XENLA (P87346) Myelin basic protein (MBP) (Myelin A1 protein)|
          Length = 175

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 36/141 (25%), Positives = 50/141 (35%), Gaps = 14/141 (9%)
 Frame = +2

Query: 41  ERPAVGDGTAGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPARCIDAPATSPLDRC 220
           ER     G+   VH       + S  R    A  R +D +      R I +P T P    
Sbjct: 49  ERSVPRKGSGKEVHMSRSGYLSSSPQRSPYHAHGRHVDDNPVVHFFRNIVSPRTPP---- 104

Query: 221 IDAPARPRLGASTLRQRRRRLGASTLRQRHHWIGASTL--------------RPGHGSVH 358
              P++P+ G S     R   GA   +  +   G+ +L              R GHGS+ 
Sbjct: 105 ---PSQPKRGFS-----RFSWGAENHKPYYGGYGSRSLEHHKSSYKGYKDPHREGHGSLS 156

Query: 359 RLFGNVAAGSVHRRSGQATAR 421
           R+F     G    RS    AR
Sbjct: 157 RIF---KLGGQRSRSSSPMAR 174

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>M3K6_HUMAN (O95382) Mitogen-activated protein kinase kinase kinase 6 (EC|
           2.7.11.25)
          Length = 1011

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 36/110 (32%), Positives = 46/110 (41%), Gaps = 13/110 (11%)
 Frame = +2

Query: 14  LQPPKQSRD-----ERPAVGDGTAGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPA 178
           LQP K+SR        P   D  + S    S N TT S      QA ++       SPP 
Sbjct: 629 LQPGKRSRSPSSPRHAPRPSDAPSASP-TPSANSTTQSQTFPCPQAPSQ----HPPSPPK 683

Query: 179 RCIDAPATS----PLDRCIDAPARPR--LGASTLRQ--RRRRLGASTLRQ 304
           RC+    TS    P +   + PA P    G S L Q  +RR + A+ L Q
Sbjct: 684 RCLSYGGTSQLRVPEEPAAEEPASPEESSGLSLLHQESKRRAMLAAVLEQ 733

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>KCNS1_RAT (O88758) Potassium voltage-gated channel subfamily S member 1|
           (Voltage-gated potassium channel subunit Kv9.1)
           (Delayed-rectifier K(+) channel alpha subunit 1)
          Length = 497

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = +1

Query: 244 ARCIDSSATSPPARCIDAPATSPLDRCIDAPAR-----PRLGASTLRQRRRRLGASTLRP 408
           AR ++   T P A   D+ A S +D C D  +       R GA+   + RRRL  +   P
Sbjct: 123 ARYLERRVTRPRAWDEDSDAPSSVDPCPDEISDVQRELARYGAARCGRLRRRLWLTMENP 182

Query: 409 GHGSVHRLF 435
           G+    +LF
Sbjct: 183 GYSLPSKLF 191

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>PANK2_HUMAN (Q9BZ23) Pantothenate kinase 2, mitochondrial precursor (EC|
           2.7.1.33) (Pantothenic acid kinase 2) (hPANK2)
          Length = 570

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
 Frame = +2

Query: 86  RSGNVTTGSVHRRSGQATARCIDSSATSPPARCIDAPATSPLDRCIDAPARPRLGASTLR 265
           R G    G+   R G+A+A  + SSA    A   +     PL R   + + P +GAS   
Sbjct: 123 RMGAGRLGAPMERHGRASATSV-SSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASAEG 181

Query: 266 QRRRRLGA-----STLRQR 307
            RR RLG+     S  RQR
Sbjct: 182 TRRDRLGSYSGPTSVSRQR 200



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 23/68 (33%), Positives = 32/68 (47%)
 Frame = +1

Query: 190 RSGNVTTGSVHRRSGQATARCIDSSATSPPARCIDAPATSPLDRCIDAPARPRLGASTLR 369
           R G    G+   R G+A+A  + SSA    A   +     PL R   + + P +GAS   
Sbjct: 123 RMGAGRLGAPMERHGRASATSV-SSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASAEG 181

Query: 370 QRRRRLGA 393
            RR RLG+
Sbjct: 182 TRRDRLGS 189

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>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2|
          Length = 1125

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 2/107 (1%)
 Frame = +2

Query: 8   RPLQPPKQSRDERPAVGDGTAGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSP--PAR 181
           +P+ P +  + ++P    GT     RR    + G+  R   +     ++ +AT+P  P R
Sbjct: 353 KPVAPGELMQLQKPTGRPGTPPP--RRPDGTSVGT--RGGSEGATPPVERTATAPTAPKR 408

Query: 182 CIDAPATSPLDRCIDAPARPRLGASTLRQRRRRLGASTLRQRHHWIG 322
               PA +P       P RP    S   +  R       RQ+ H IG
Sbjct: 409 PGHRPAQAPAAGAPRRPGRPEWDDSAKLEALRNKSPQKQRQKVHIIG 455

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>ATG18_NEUCR (Q96U88) Autophagy-related protein 18|
          Length = 461

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +2

Query: 23  PKQSRDERPAVGDGTAGS-VHRRSGNVTTGSVHRRSGQATARCIDSSATS 169
           P   + E P+ G+G  GS  H+R  + + G++ RRS Q   R +   A+S
Sbjct: 318 PSPHKGEVPSAGNGNNGSGSHKREPSGSFGNMLRRSSQMMVRGVAGVASS 367

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>TRAG5_ECOLI (Q00184) Conjugal transfer protein traG|
          Length = 637

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 16/66 (24%), Positives = 28/66 (42%)
 Frame = -2

Query: 201 VAGASMHRAGGDVAEESMHRAVAWPERRCTDPVVTLPERRCTEPAVPSPTAGRSSLLCFG 22
           VA A +  +    A E +H +  W E++       LP  R     V    A  ++ +  G
Sbjct: 99  VAVAKVVTSNSSKANEYLHGSARWAEKKDIQAAGLLPRERNVLEIVTGKAAPTATGVYVG 158

Query: 21  GWRGRE 4
           GW+ ++
Sbjct: 159 GWQDKD 164

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>LRC56_RAT (Q4V8C9) Leucine-rich repeat-containing protein 56|
          Length = 548

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 24/75 (32%), Positives = 32/75 (42%)
 Frame = -3

Query: 407 GRSVDAPSRRRRCRRVDAPSRGLAGASMHRSSGDVAGASMHRAGGDVAEESMHRAVAWPE 228
           GRS D P R RR R +     G  G S+    G V G  +     +V+ +  HRA     
Sbjct: 466 GRSADLPFRGRRLRVL-----GSLGPSL--GEGSVLGERLALRALEVSSDPSHRA----- 513

Query: 227 RRCTDPVVTLPERRC 183
           + C DP  +L    C
Sbjct: 514 QGCPDPKPSLGPATC 528

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>MANA_RHOMR (P49425) Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78)|
           (Endo-(1,4)-beta-mannanase)
          Length = 1021

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +2

Query: 215 RCIDAPARPRLGASTLRQRRRRLGASTLRQRHHWIGASTLRPGHGSVH 358
           R I    RP L A  + Q+++R      R RHH  G   LR  H + H
Sbjct: 43  RLIAHTGRPALNAQRITQQKQRDQCRGQRHRHHQ-GGRNLRKAHRTFH 89



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = +3

Query: 111 RCIDAPARPRLGASTLRQRRRRLGASTLRQRHHWIGASTLRPGHGSVH 254
           R I    RP L A  + Q+++R      R RHH  G   LR  H + H
Sbjct: 43  RLIAHTGRPALNAQRITQQKQRDQCRGQRHRHHQ-GGRNLRKAHRTFH 89

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>GDF7_CERAE (Q9BDW8) Growth/differentiation factor 7 precursor (GDF-7)|
          Length = 447

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 23/67 (34%), Positives = 28/67 (41%)
 Frame = -1

Query: 244 PWPGRSVDAPIQW*RCRSVDAPSRRRRCRRVDAPSRGLAGASMHRSSGDVAGASMHRAGR 65
           P PG    +P      R+V A  RRRR          LAG    + SG  AG    R GR
Sbjct: 298 PDPGTGTGSP------RAVTAGRRRRRT--------ALAGTRTAQGSGGGAGRGHGRRGR 343

Query: 64  AVADRRP 44
           +   R+P
Sbjct: 344 SRCSRKP 350

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>TRXB_STRCO (P52215) Thioredoxin reductase (EC 1.8.1.9) (TRXR)|
          Length = 321

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query: 65  TAGSVHR-RSGNVTTGSVHRRSGQATARCIDSSATSPPARC 184
           TAG+VHR ++  VTTGS HR+ G      +     S  A C
Sbjct: 98  TAGTVHRAKAVIVTTGSQHRKLGLPNEDALSGRGVSWCATC 138

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>EVL_RAT (O08719) Ena/VASP-like protein (Ena/vasodilator stimulated|
           phosphoprotein-like)
          Length = 393

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 5/103 (4%)
 Frame = -3

Query: 374 RCRRVDAPSRGLAGASMHRSSGDVAGASMHRAGGDVAEESMHRAVAWPERRCTD---PVV 204
           + RRV  P     G+S   +S   A  +    GG    E M++ +A   +  +    P  
Sbjct: 229 KLRRVQRPEDASGGSSPSGTSKSDANRASSGGGGGGLMEEMNKLLAKRRKAASQTDKPAD 288

Query: 203 TLPERRCTEPAATLPK--SRCTEPWPGRSVDAPIQW*RCRSVD 81
              +   TE  +T P   SR T   P  S      W R  SV+
Sbjct: 289 RKEDENQTEDPSTSPSPGSRATSQPPNSSEAGRKPWERSNSVE 331

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>COBD_SALTY (P97084) Threonine-phosphate decarboxylase (EC 4.1.1.81)|
           (L-threonine-O-3-phosphate decarboxylase)
          Length = 364

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 201 RHHWIGASTLRPGHGSVHRLFGNVAAGSVHRRSGNVTTGSVHRRSGQATARC 356
           RHH + AS +  G+G    +F  VA+G   RR+  VT G        A + C
Sbjct: 70  RHHQVPASWILAGNGETESIF-TVASGLKPRRAMIVTPGFAEYGRALAQSGC 120



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +1

Query: 97  RHHWIGASTLRPGHGSVHRLFGNVAAGSVHRRSGNVTTGSVHRRSGQATARC 252
           RHH + AS +  G+G    +F  VA+G   RR+  VT G        A + C
Sbjct: 70  RHHQVPASWILAGNGETESIF-TVASGLKPRRAMIVTPGFAEYGRALAQSGC 120

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>CO4_MOUSE (P01029) Complement C4 precursor [Contains: Complement C4 beta|
           chain; Complement C4 alpha chain; C4a anaphylatoxin;
           Complement C4 gamma chain]
          Length = 1738

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 230 ERRCTDPVVTLPERR-CTEPAATLPKSRCTEPW 135
           +R C D +  LP +R C + AA +P+  C EP+
Sbjct: 698 KRCCQDGMTKLPMKRTCEQRAARVPQQACREPF 730



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -1

Query: 334 ERRCTDPVVTLPERR-CTEPAATLPKSRCTEPW 239
           +R C D +  LP +R C + AA +P+  C EP+
Sbjct: 698 KRCCQDGMTKLPMKRTCEQRAARVPQQACREPF 730

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>RABE2_HUMAN (Q9H5N1) Rab GTPase-binding effector protein 2 (Rabaptin-5beta)|
          Length = 569

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
 Frame = -2

Query: 297 SVDAPSRRRRCRRVDAPSRGLAGASMHRSSGDVAGASMHRAGG-----------DVAEES 151
           + D   RRRR       SR   GA+    SG+++      AG            +V+E +
Sbjct: 8   AADDDERRRRPGAALEDSRSQEGANGEAESGELSRLRAELAGALAEMETMKAVAEVSEST 67

Query: 150 MHRAVAWPERRCTDPVVTL 94
              AVA  +R+C + V +L
Sbjct: 68  KAEAVAAVQRQCQEEVASL 86



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
 Frame = -3

Query: 401 SVDAPSRRRRCRRVDAPSRGLAGASMHRSSGDVAGASMHRAGG-----------DVAEES 255
           + D   RRRR       SR   GA+    SG+++      AG            +V+E +
Sbjct: 8   AADDDERRRRPGAALEDSRSQEGANGEAESGELSRLRAELAGALAEMETMKAVAEVSEST 67

Query: 254 MHRAVAWPERRCTDPVVTL 198
              AVA  +R+C + V +L
Sbjct: 68  KAEAVAAVQRQCQEEVASL 86

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>ARGA_PSEPU (P0A100) Amino-acid acetyltransferase (EC 2.3.1.1)|
           (N-acetylglutamate synthase) (AGS) (NAGS)
          Length = 432

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 24/74 (32%), Positives = 28/74 (37%)
 Frame = +1

Query: 130 PGHGSVHRLFGNVAAGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPARCIDAPATS 309
           PG G  H  FGN+    V   S  V    VH    Q  +R  D   T    R +     +
Sbjct: 28  PGDGVEHPNFGNIVHDLVLLHSLGVRLVLVHGSRPQIESRLADRGLTPHYHRGMRITDAA 87

Query: 310 PLDRCIDAPARPRL 351
            LD  IDA    RL
Sbjct: 88  TLDCVIDAVGALRL 101

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>ARGA_PSEPK (P0A0Z9) Amino-acid acetyltransferase (EC 2.3.1.1)|
           (N-acetylglutamate synthase) (AGS) (NAGS)
          Length = 432

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 24/74 (32%), Positives = 28/74 (37%)
 Frame = +1

Query: 130 PGHGSVHRLFGNVAAGSVHRRSGNVTTGSVHRRSGQATARCIDSSATSPPARCIDAPATS 309
           PG G  H  FGN+    V   S  V    VH    Q  +R  D   T    R +     +
Sbjct: 28  PGDGVEHPNFGNIVHDLVLLHSLGVRLVLVHGSRPQIESRLADRGLTPHYHRGMRITDAA 87

Query: 310 PLDRCIDAPARPRL 351
            LD  IDA    RL
Sbjct: 88  TLDCVIDAVGALRL 101

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>POLG_LMV0 (P31999) Genome polyprotein [Contains: P1 proteinase (N-terminal|
           protein); Helper component proteinase (EC 3.4.22.45)
           (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
           inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
           (6K2); Viral gen
          Length = 3255

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 239 AWPERRCTDPVVTLPERRCTEPAATLPK 156
           ++ E   ++PV + PE +C EPA T+ K
Sbjct: 133 SFTELETSEPVASAPEPKCEEPARTIAK 160



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 343 AWPERRCTDPVVTLPERRCTEPAATLPK 260
           ++ E   ++PV + PE +C EPA T+ K
Sbjct: 133 SFTELETSEPVASAPEPKCEEPARTIAK 160

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>YAZ1_SCHPO (Q10223) Hypothetical protein C13D6.01 in chromosome I|
          Length = 431

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/68 (26%), Positives = 32/68 (47%)
 Frame = +1

Query: 217 VHRRSGQATARCIDSSATSPPARCIDAPATSPLDRCIDAPARPRLGASTLRQRRRRLGAS 396
           VH+++  +   C +S  TS  A+  D P   P+   +D P+     A T+      L +S
Sbjct: 235 VHKKNPNSAVTCSESINTSAVAKFTDIPTIIPI--FLD-PSYQSYAAKTIHSDTSSLASS 291

Query: 397 TLRPGHGS 420
            ++ G G+
Sbjct: 292 IIQTGDGT 299

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>PRIA_RHORU (P05445) Primosomal protein N' (EC 3.6.1.-) (ATP-dependent helicase|
           priA) (Replication factor Y)
          Length = 811

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
 Frame = -2

Query: 432 ESMHRAVAWPERRCTEPAATLPKSRCTEPWPGRSVD----APIQW*RCRSVDAPSRRRRC 265
           E    A+A   RR  +    LP+      WP R  D    AP+QW     + A +RRR  
Sbjct: 261 EVYFEAIAETLRRGRQALVLLPEIALAAQWPRRFADRFGAAPVQW--HSQMGAAARRRAW 318

Query: 264 RRV 256
           R V
Sbjct: 319 RAV 321

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>DHTM_METME (P16099) Trimethylamine dehydrogenase (EC 1.5.8.2) (TMADh)|
          Length = 729

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
 Frame = +3

Query: 174 RLGASTLRQRH----HWIGASTLRPGHGSVHRLF---GNVAAGSVHRRSGNVTTGSVHRR 332
           ++G  TLR R     H IGA + +PG  S HR     G  AA +    S N  +   HR 
Sbjct: 14  QIGPKTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKAEGGWAALNTEYCSINPESDDTHRL 73

Query: 333 SGQ 341
           S +
Sbjct: 74  SAR 76

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>OST3A_HUMAN (Q9Y663) Heparan sulfate glucosamine 3-O-sulfotransferase 3A1 (EC|
           2.8.2.30) (Heparan sulfate D-glucosaminyl
           3-O-sulfotransferase 3A1) (Heparan sulfate
           3-O-sulfotransferase 3A1) (h3-OST-3A)
          Length = 406

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/70 (28%), Positives = 27/70 (38%)
 Frame = -2

Query: 270 RCRRVDAPSRGLAGASMHRSSGDVAGASMHRAGGDVAEESMHRAVAWPERRCTDPVVTLP 91
           RC+ +  P  GL+G       G+ AGA     GG V          WP       ++ LP
Sbjct: 45  RCQTLSGPVVGLSGG------GEEAGAP----GGGVLAGGPRELAVWPAAAQRKRLLQLP 94

Query: 90  ERRCTEPAVP 61
           + R   P  P
Sbjct: 95  QWRRRRPPAP 104

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>DYRK2_DROME (Q9V3D5) Dual specificity tyrosine-phosphorylation-regulated kinase|
           2 (EC 2.7.12.1) (dDyrk2) (Protein smell impaired at 35A)
          Length = 722

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 350 SVHRLFGNVAAGSVHRRSGQATAR 421
           S+HR++G V +GS H  S  AT +
Sbjct: 615 SLHRIYGGVGSGSTHHVSSAATRK 638

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>TAF1_DROME (P51123) Transcription initiation factor TFIID subunit 1 (EC|
            2.7.11.1) (Transcription initiation factor TFIID 230 kDa
            subunit) (TAFII-230) (TAFII250) (TBP-associated factor
            230 kDa) (p230)
          Length = 2129

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -2

Query: 204  DVAGASMHRAGGDVAEESMHRAVAWPERRCTDPVVTL 94
            D  G    R GGD+  + + R      RR TDPVV L
Sbjct: 1439 DAMGKKKRRVGGDLHCDYLQRHNKTANRRRTDPVVVL 1475



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -3

Query: 308  DVAGASMHRAGGDVAEESMHRAVAWPERRCTDPVVTL 198
            D  G    R GGD+  + + R      RR TDPVV L
Sbjct: 1439 DAMGKKKRRVGGDLHCDYLQRHNKTANRRRTDPVVVL 1475

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>POLG_LMVE (P89876) Genome polyprotein [Contains: P1 proteinase (N-terminal|
           protein); Helper component proteinase (EC 3.4.22.45)
           (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
           inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
           (6K2); Viral gen
          Length = 3255

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
 Frame = -2

Query: 411 AWPERRCTEPAATLPKSRCTEPWPGRSV---DAPIQW*RCRSVDAPSRRRRCRRVDAPSR 241
           ++ E   +EP  + PK  C E  P R++   + P++   C   D     +    VD   +
Sbjct: 133 SFTELETSEPVVSAPKPNCEE--PARTIAKPEEPVEQETCG--DGKRLLQAQMEVDKAEQ 188

Query: 240 GLAGASMH-----RSSGDVAGASMHRAGGDVAEESMHRAVAWPERRCTDPVVTLPERRCT 76
            LA A +      R  G        R  G +  ++     +W +R+ T  ++ +    C 
Sbjct: 189 DLAFAYLSASLKPRLEGRTTATIARRRDGCLVYKT---KPSWSQRKGTKKILKVDTLACK 245

Query: 75  EPAVPS 58
            P +P+
Sbjct: 246 NPYIPA 251

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>MAST1_MOUSE (Q9R1L5) Microtubule-associated serine/threonine-protein kinase 1 (EC|
            2.7.11.1) (Syntrophin-associated serine/threonine-protein
            kinase)
          Length = 1566

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 292  RCTEPAATLPKSRCTEPWPGRSV 224
            RCT  A T+P + C  P PG +V
Sbjct: 1204 RCTSSAHTIPDAGCPPPLPGHTV 1226



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 188  RCTEPAATLPKSRCTEPWPGRSV 120
            RCT  A T+P + C  P PG +V
Sbjct: 1204 RCTSSAHTIPDAGCPPPLPGHTV 1226



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 396  RCTEPAATLPKSRCTEPWPGRSV 328
            RCT  A T+P + C  P PG +V
Sbjct: 1204 RCTSSAHTIPDAGCPPPLPGHTV 1226


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,975,954
Number of Sequences: 219361
Number of extensions: 1808793
Number of successful extensions: 7371
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 3641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7230
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result