ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl55h01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1L100_ADE05 (P24933) Late 100 kDa protein 28 7.4
2PRP_PIG (Q95JC9) Basic proline-rich protein precursor [Contains:... 28 7.4

>L100_ADE05 (P24933) Late 100 kDa protein|
          Length = 807

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -1

Query: 63  RGPGGHGARLGFPRGGEDFGR 1
           RG GGH  RLG PR G   GR
Sbjct: 741 RGGGGHDGRLGEPRRGSFRGR 761



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>PRP_PIG (Q95JC9) Basic proline-rich protein precursor [Contains:|
           Proline-rich peptide SP-A (PRP-SP-A); Proline-rich
           peptide SP-B (PRP-SP-B); Parotid hormone (PH-Ab)]
          Length = 676

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 5   PKSSPPLGNPSLAPCPPGP 61
           P + PP G P L P PPGP
Sbjct: 243 PGARPPPGPPPLGPPPPGP 261


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.301    0.143    0.481 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,463,845
Number of Sequences: 219361
Number of extensions: 88104
Number of successful extensions: 489
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 80,573,946
effective HSP length: 0
effective length of database: 80,573,946
effective search space used: 1933774704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.9 bits)
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