ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl55g12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (E... 30 2.2
2TKRA_ENTAG (P58000) 2-ketogluconate reductase (EC 1.1.1.215) (2K... 28 5.0
3LSB6_YEAST (P42951) Phosphatidylinositol 4-kinase LSB6 (EC 2.7.1... 28 6.5

>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 51)
           (Ubiquitin-specific-processing protease 51)
           (Deubiquitinating enzyme 51)
          Length = 711

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = +2

Query: 89  KP*PRPQPGGSSLHSPGFLLQPPDLAR 169
           KP PRPQP   S   PG    PP  AR
Sbjct: 103 KPRPRPQPRARSRSQPGLSAPPPPPAR 129



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>TKRA_ENTAG (P58000) 2-ketogluconate reductase (EC 1.1.1.215) (2KR)|
           (2-ketoaldonate reductase)
          Length = 323

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -2

Query: 204 LSSARRKQMAVERARSGGWRRKPG-EW 127
           LSSARR     ER ++G WRR  G +W
Sbjct: 111 LSSARRVVEVAERVKAGEWRRSIGPDW 137



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>LSB6_YEAST (P42951) Phosphatidylinositol 4-kinase LSB6 (EC 2.7.1.67)|
           (PI4-kinase) (PtdIns-4-kinase)
          Length = 607

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 192 RRKQMAVERARSGGWRRKPGEWRLDPPGW 106
           R K  A++   S  W+  P EWRL P GW
Sbjct: 406 RLKLAAIDNGLSFPWKH-PDEWRLYPYGW 433


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,597,301
Number of Sequences: 219361
Number of extensions: 343134
Number of successful extensions: 1352
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1352
length of database: 80,573,946
effective HSP length: 45
effective length of database: 70,702,701
effective search space used: 1696864824
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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