>PAX8_RAT (P51974) Paired box protein Pax-8|
          Length = 458

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 209 PAVASDPAPPQRILRQPFLDLVMVGSGGSLAPHLP 105
           P ++S  + P  +    FLDL  VGSGG     +P
Sbjct: 314 PELSSSSSTPSSLSSSAFLDLQQVGSGGPAGASVP 348


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.303    0.119    0.324 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,364,068
Number of Sequences: 219361
Number of extensions: 433178
Number of successful extensions: 524
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)