ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl55g07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_474230.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2682 Score = 236 bits (119), Expect = 5e-59 Identities = 239/278 (85%), Gaps = 6/278 (2%) Strand = Plus / Plus Query: 142 atgaccaagtccaagaacggctgcctcaagatcctc---tgcggcggcgccggatccgac 198 ||||| ||| |||||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 1 atgacgaagcccaagaacggctgcctcaagatcctcgcctgcgccggcggcggatccgac 60 Query: 199 gccaccgccggctccgaccccgagaccgacgcccacgccgacgagagcaaggccatctca 258 | |||||||||||||| ||| | || | ||||| |||||||| ||||||||| ||| Sbjct: 61 ccgtccgccggctccgacggcgacgcggatgaccacgtcgacgagaacaaggccatatca 120 Query: 259 gataaaagcagatggagctttcgaaggaggtctacaaggcaccgagttctgaagaattct 318 |||||||| || ||||||||||| ||||||||||||||||| || ||| ||||||||||| Sbjct: 121 gataaaagtaggtggagctttcgtaggaggtctacaaggcatcgtgttttgaagaattct 180 Query: 319 gatatatccgagcctgaaactctaagttcgagcaaagcanaagctgatgttgctccaagc 378 |||||||| || ||||||||||| ||||||||||||||| ||||||| ||||||||||| Sbjct: 181 gatatatctgaacctgaaactcttagttcgagcaaagcaaaagctgaaattgctccaagc 240 Query: 379 aacaatgtctactcttcaacatactcttattcctcaga 416 |||| |||| |||||||| ||||| ||| ||||||| Sbjct: 241 aaca---tctattcttcaacttactcctatgcctcaga 275
>dbj|AK066310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063E15, full insert sequence Length = 3170 Score = 236 bits (119), Expect = 5e-59 Identities = 239/278 (85%), Gaps = 6/278 (2%) Strand = Plus / Plus Query: 142 atgaccaagtccaagaacggctgcctcaagatcctc---tgcggcggcgccggatccgac 198 ||||| ||| |||||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 165 atgacgaagcccaagaacggctgcctcaagatcctcgcctgcgccggcggcggatccgac 224 Query: 199 gccaccgccggctccgaccccgagaccgacgcccacgccgacgagagcaaggccatctca 258 | |||||||||||||| ||| | || | ||||| |||||||| ||||||||| ||| Sbjct: 225 ccgtccgccggctccgacggcgacgcggatgaccacgtcgacgagaacaaggccatatca 284 Query: 259 gataaaagcagatggagctttcgaaggaggtctacaaggcaccgagttctgaagaattct 318 |||||||| || ||||||||||| ||||||||||||||||| || ||| ||||||||||| Sbjct: 285 gataaaagtaggtggagctttcgtaggaggtctacaaggcatcgtgttttgaagaattct 344 Query: 319 gatatatccgagcctgaaactctaagttcgagcaaagcanaagctgatgttgctccaagc 378 |||||||| || ||||||||||| ||||||||||||||| ||||||| ||||||||||| Sbjct: 345 gatatatctgaacctgaaactcttagttcgagcaaagcaaaagctgaaattgctccaagc 404 Query: 379 aacaatgtctactcttcaacatactcttattcctcaga 416 |||| |||| |||||||| ||||| ||| ||||||| Sbjct: 405 aaca---tctattcttcaacttactcctatgcctcaga 439
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence Length = 163448 Score = 178 bits (90), Expect = 1e-41 Identities = 151/171 (88%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 246 caaggccatctcagataaaagcagatggagctttcgaaggaggtctacaaggcaccgagt 305 ||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| || || Sbjct: 87449 caaggccatatcagataaaagtaggtggagctttcgtaggaggtctacaaggcatcgtgt 87508 Query: 306 tctgaagaattctgatatatccgagcctgaaactctaagttcgagcaaagcanaagctga 365 | ||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||| Sbjct: 87509 tttgaagaattctgatatatctgaacctgaaactcttagttcgagcaaagcaaaagctga 87568 Query: 366 tgttgctccaagcaacaatgtctactcttcaacatactcttattcctcaga 416 ||||||||||||||| |||| |||||||| ||||| ||| ||||||| Sbjct: 87569 aattgctccaagcaaca---tctattcttcaacttactcctatgcctcaga 87616 Score = 71.9 bits (36), Expect = 2e-09 Identities = 68/78 (87%), Gaps = 3/78 (3%) Strand = Plus / Plus Query: 142 atgaccaagtccaagaacggctgcctcaagatcct---ctgcggcggcgccggatccgac 198 ||||| ||| ||||||||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 85875 atgacgaagcccaagaacggctgcctcaagatcctcgcctgcgccggcggcggatccgac 85934 Query: 199 gccaccgccggctccgac 216 | |||||||||||||| Sbjct: 85935 ccgtccgccggctccgac 85952
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 178 bits (90), Expect = 1e-41 Identities = 151/171 (88%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 246 caaggccatctcagataaaagcagatggagctttcgaaggaggtctacaaggcaccgagt 305 ||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| || || Sbjct: 33875550 caaggccatatcagataaaagtaggtggagctttcgtaggaggtctacaaggcatcgtgt 33875609 Query: 306 tctgaagaattctgatatatccgagcctgaaactctaagttcgagcaaagcanaagctga 365 | ||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||| Sbjct: 33875610 tttgaagaattctgatatatctgaacctgaaactcttagttcgagcaaagcaaaagctga 33875669 Query: 366 tgttgctccaagcaacaatgtctactcttcaacatactcttattcctcaga 416 ||||||||||||||| |||| |||||||| ||||| ||| ||||||| Sbjct: 33875670 aattgctccaagcaaca---tctattcttcaacttactcctatgcctcaga 33875717 Score = 71.9 bits (36), Expect = 2e-09 Identities = 68/78 (87%), Gaps = 3/78 (3%) Strand = Plus / Plus Query: 142 atgaccaagtccaagaacggctgcctcaagatcct---ctgcggcggcgccggatccgac 198 ||||| ||| ||||||||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 33873976 atgacgaagcccaagaacggctgcctcaagatcctcgcctgcgccggcggcggatccgac 33874035 Query: 199 gccaccgccggctccgac 216 | |||||||||||||| Sbjct: 33874036 ccgtccgccggctccgac 33874053
>dbj|AK120778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009J07, full insert sequence Length = 4121 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 96 ggaggaggaggggaggtgaggagcgagc 123 ||||||||||||| |||||||||||||| Sbjct: 449 ggaggaggaggggtggtgaggagcgagc 476
>emb|CR596699.1| full-length cDNA clone CS0DI079YF06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2183 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 76 ccgaggcggcgccggcggccgga 98 ||||||||||||||||||||||| Sbjct: 389 ccgaggcggcgccggcggccgga 411
>ref|NM_178493.3| Homo sapiens notum pectinacetylesterase homolog (Drosophila) (NOTUM), mRNA Length = 2233 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 76 ccgaggcggcgccggcggccgga 98 ||||||||||||||||||||||| Sbjct: 396 ccgaggcggcgccggcggccgga 418
>gb|AC145207.2| Homo sapiens chromosome 17, clone RP11-498C9, complete sequence Length = 182848 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 76 ccgaggcggcgccggcggccgga 98 ||||||||||||||||||||||| Sbjct: 26186 ccgaggcggcgccggcggccgga 26208
>gb|BC060882.1| Homo sapiens notum pectinacetylesterase homolog (Drosophila), mRNA (cDNA clone MGC:71851 IMAGE:30336041), complete cds Length = 2233 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 76 ccgaggcggcgccggcggccgga 98 ||||||||||||||||||||||| Sbjct: 396 ccgaggcggcgccggcggccgga 418
>emb|AL359073.25| Human DNA sequence from clone RP11-432F4 on chromosome 9 Contains the 5' end of the gene for regulator of differentiation 1 (ROD1), a ribosomal protein L32 (RPL32) pseudogene and a CpG island.n, complete sequence Length = 64850 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 gcggcgccggcggccggaggag 102 |||||||||||||||||||||| Sbjct: 19582 gcggcgccggcggccggaggag 19561
>ref|XM_371097.4| PREDICTED: Homo sapiens similar to CG13076-PA, isoform A (LOC388444), mRNA Length = 1361 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 cgaggcggcgccggcggccgga 98 |||||||||||||||||||||| Sbjct: 374 cgaggcggcgccggcggccgga 395
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.38 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 78 gaggcggcgccggcggc-cggaggaggaggggag 110 ||||||||||||||||| ||||||||||||||| Sbjct: 2593900 gaggcggcgccggcggcggggaggaggaggggag 2593933 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gcgccggcggccggaggagga 104 ||||||||||||||||||||| Sbjct: 26911590 gcgccggcggccggaggagga 26911610 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 cggccggaggaggaggggagg 111 ||||||||||||||||||||| Sbjct: 19703904 cggccggaggaggaggggagg 19703924
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggaggag 105 ||||||| |||||||||||||||||| Sbjct: 4275904 ggcggcggcggcggccggaggaggag 4275879 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 ccgagaccgacgcccacgccgacg 241 |||||||||||||| ||||||||| Sbjct: 13048469 ccgagaccgacgccgacgccgacg 13048446
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 196 gacgccaccgccggctccgaccccgagaccgacg 229 |||||||||||| || || ||||||||||||||| Sbjct: 963153 gacgccaccgcccgcgcctaccccgagaccgacg 963186 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cgaggcggcgccggcggccg 96 |||||||||||||||||||| Sbjct: 2272600 cgaggcggcgccggcggccg 2272619
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggaggag 105 ||||||| |||||||||||||||||| Sbjct: 121125 ggcggcggcggcggccggaggaggag 121100
>gb|AE005052.1| Halobacterium sp. NRC-1 section 83 of 170 of the complete genome Length = 10031 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 197 acgccaccgccggctccgaccccgag 222 |||||||||||||| ||||||||||| Sbjct: 5087 acgccaccgccggcaccgaccccgag 5062
>dbj|AK121018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049B21, full insert sequence Length = 577 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggaggag 105 ||||||| |||||||||||||||||| Sbjct: 29 ggcggcggcggcggccggaggaggag 54
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.38 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 78 gaggcggcgccggcggc-cggaggaggaggggag 110 ||||||||||||||||| ||||||||||||||| Sbjct: 2593844 gaggcggcgccggcggcggggaggaggaggggag 2593877 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gcgccggcggccggaggagga 104 ||||||||||||||||||||| Sbjct: 26839760 gcgccggcggccggaggagga 26839780 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 cggccggaggaggaggggagg 111 ||||||||||||||||||||| Sbjct: 19630118 cggccggaggaggaggggagg 19630138
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 44.1 bits (22), Expect = 0.38 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 78 gaggcggcgccggcggc-cggaggaggaggggag 110 ||||||||||||||||| ||||||||||||||| Sbjct: 74109 gaggcggcgccggcggcggggaggaggaggggag 74076
>gb|U25126.1|ASU25126 Anas sp. carboxypeptidase gp180 mRNA, complete cds Length = 4284 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 83 ggcgccggcggccggaggaggagggg 108 |||| ||||||||||||||||||||| Sbjct: 146 ggcggcggcggccggaggaggagggg 171
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 42.1 bits (21), Expect = 1.5 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggaggagg-ggaggtgag 115 ||||||| ||||||| ||||||||||| ||||||||| Sbjct: 83949 ggcggcggcggcggcgggaggaggaggtggaggtgag 83985
>ref|XM_468314.1| Oryza sativa (japonica cultivar-group), mRNA Length = 873 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 ggcggccggaggaggagggga 109 ||||||||||||||||||||| Sbjct: 475 ggcggccggaggaggagggga 455
>ref|NM_196929.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0006L06.26), mRNA Length = 288 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagga 104 ||||||| ||||||||||||||||| Sbjct: 25 ggcggcggcggcggccggaggagga 49
>ref|NM_196711.1| Oryza sativa (japonica cultivar-group) translin-like protein (OSJNBb0015F09b.5), mRNA Length = 894 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 78 gaggcggcgccggcggccggaggaggagg 106 ||||||||| ||||||| ||||||||||| Sbjct: 89 gaggcggcggcggcggcgggaggaggagg 61
>gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E01, complete sequence Length = 180426 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cggcggccggaggaggagggg 108 ||||||||||||||||||||| Sbjct: 123091 cggcggccggaggaggagggg 123111
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gcgccggcggccggaggagga 104 ||||||||||||||||||||| Sbjct: 36557 gcgccggcggccggaggagga 36577
>ref|XM_418552.1| PREDICTED: Gallus gallus similar to M1851 (LOC420449), mRNA Length = 1674 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 cgccggatccgacgccaccgc 206 ||||||||||||||||||||| Sbjct: 204 cgccggatccgacgccaccgc 224
>ref|XM_547492.2| PREDICTED: Canis familiaris similar to Beclin 1 (Coiled-coil myosin-like BCL2-interacting protein) (Protein GT197) (LOC490371), mRNA Length = 1359 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 ggctgcctcaagatcctctgc 180 ||||||||||||||||||||| Sbjct: 591 ggctgcctcaagatcctctgc 571
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagga 104 ||||||| ||||||||||||||||| Sbjct: 73718 ggcggcggcggcggccggaggagga 73742
>gb|AC073391.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0015F09b, complete sequence Length = 108964 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 78 gaggcggcgccggcggccggaggaggagg 106 ||||||||| ||||||| ||||||||||| Sbjct: 15526 gaggcggcggcggcggcgggaggaggagg 15498
>ref|XM_392469.2| PREDICTED: Apis mellifera similar to CG5735-PB, isoform B (LOC408940), mRNA Length = 2130 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 212 ccgaccccgagaccgacgcccacgccgac 240 |||||||| | |||||||||||||||||| Sbjct: 1181 ccgaccccaacaccgacgcccacgccgac 1153
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagga 104 ||||||| ||||||||||||||||| Sbjct: 16729201 ggcggcggcggcggccggaggagga 16729225 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 78 gaggcggcgccggcggccggaggaggagg 106 ||||||||| ||||||| ||||||||||| Sbjct: 15432180 gaggcggcggcggcggcgggaggaggagg 15432152 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 4838777 ggcggcggcggcggccggaggagg 4838800 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 4756754 ggcggcggcggcggccggaggagg 4756777 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 4747827 ggcggcggcggcggccggaggagg 4747850 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 4738925 ggcggcggcggcggccggaggagg 4738948
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 cggcggccggaggaggagggg 108 ||||||||||||||||||||| Sbjct: 15730987 cggcggccggaggaggagggg 15731007
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ggcggccggaggaggagggga 109 ||||||||||||||||||||| Sbjct: 34578196 ggcggccggaggaggagggga 34578216 Score = 40.1 bits (20), Expect = 5.9 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 72 tcacccgaggcggcgccggcggccggaggaggaggggagg 111 ||||| ||||||||| |||||| |||||||||||||||| Sbjct: 35238917 tcaccagaggcggcggcggcgga-ggaggaggaggggagg 35238955 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ggccggaggaggaggggagg 111 |||||||||||||||||||| Sbjct: 23245908 ggccggaggaggaggggagg 23245889 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggaggaggggagg 111 ||||||| |||||| |||||||||||| |||| Sbjct: 20724219 ggcggcggcggcgggcggaggaggaggcgagg 20724250 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 96 ggaggaggaggggaggtgaggagcgagc 123 ||||||||||||| |||| ||||||||| Sbjct: 14660033 ggaggaggaggggtggtggggagcgagc 14660060
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ggcggccggaggaggagggga 109 ||||||||||||||||||||| Sbjct: 89136 ggcggccggaggaggagggga 89156
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ggcggccggaggaggagggga 109 ||||||||||||||||||||| Sbjct: 44811 ggcggccggaggaggagggga 44831
>dbj|AK109650.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-A11, full insert sequence Length = 879 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 ggcggccggaggaggagggga 109 ||||||||||||||||||||| Sbjct: 481 ggcggccggaggaggagggga 461
>dbj|AK108335.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-A05, full insert sequence Length = 720 Score = 42.1 bits (21), Expect = 1.5 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggaggagg-ggaggtgag 115 ||||||| ||||||| ||||||||||| ||||||||| Sbjct: 136 ggcggcggcggcggcgggaggaggaggtggaggtgag 172
>dbj|AK107743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-G12, full insert sequence Length = 887 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagga 104 ||||||| ||||||||||||||||| Sbjct: 453 ggcggcggcggcggccggaggagga 477
>dbj|AK063397.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-H10, full insert sequence Length = 1082 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 78 gaggcggcgccggcggccggaggaggagg 106 ||||||||| ||||||| ||||||||||| Sbjct: 80 gaggcggcggcggcggcgggaggaggagg 52
>gb|AY105288.1| Zea mays PCO140798 mRNA sequence Length = 718 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 tcagataaaagcagatggagctttc 280 ||||||||||||||||| ||||||| Sbjct: 159 tcagataaaagcagatgtagctttc 183
>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940123D9, complete sequence Length = 121336 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 cgagaccgacgcccacgccga 239 ||||||||||||||||||||| Sbjct: 73597 cgagaccgacgcccacgccga 73577
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagga 104 ||||||| ||||||||||||||||| Sbjct: 16738241 ggcggcggcggcggccggaggagga 16738265 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 78 gaggcggcgccggcggccggaggaggagg 106 ||||||||| ||||||| ||||||||||| Sbjct: 15440421 gaggcggcggcggcggcgggaggaggagg 15440393 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 4839598 ggcggcggcggcggccggaggagg 4839621 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 4757575 ggcggcggcggcggccggaggagg 4757598 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 4748648 ggcggcggcggcggccggaggagg 4748671 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 4739746 ggcggcggcggcggccggaggagg 4739769
>gb|AC174464.1| Oryza sativa (japonica cultivar-group) chromosome 10 BAC clone OSJNBb0094D21, complete sequence Length = 127821 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 180 cggcggcgccggatccgacgccaccgccg 208 ||||||||||||||||| |||| |||||| Sbjct: 117647 cggcggcgccggatccgtcgcccccgccg 117619
>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142370 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 gcgccggcggccggaggagga 104 ||||||||||||||||||||| Sbjct: 115557 gcgccggcggccggaggagga 115577
>emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb0078B20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133659 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 cggccggaggaggaggggagg 111 ||||||||||||||||||||| Sbjct: 23089 cggccggaggaggaggggagg 23069
>ref|XM_549977.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggag 99 |||||||||||||||||||| Sbjct: 261 ggcggcgccggcggccggag 280
>ref|XM_482379.1| Oryza sativa (japonica cultivar-group), mRNA Length = 977 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 72 ggcggcggcggcggccggaggagg 49
>ref|XM_507581.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0007M04.13 mRNA Length = 983 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 78 ggcggcggcggcggccggaggagg 55
>ref|XM_507230.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0007M04.13 mRNA Length = 1096 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 74 ggcggcggcggcggccggaggagg 51
>ref|XM_468434.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2030 Score = 40.1 bits (20), Expect = 5.9 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Minus Query: 72 tcacccgaggcggcgccggcggccggaggaggaggggagg 111 ||||| ||||||||| |||||| |||||||||||||||| Sbjct: 676 tcaccagaggcggcggcggcgga-ggaggaggaggggagg 638
>ref|XM_466547.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ggccggaggaggaggggagg 111 |||||||||||||||||||| Sbjct: 899 ggccggaggaggaggggagg 880
>ref|XM_466153.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1190 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggaggaggggagg 111 ||||||| |||||| |||||||||||| |||| Sbjct: 83 ggcggcggcggcgggcggaggaggaggcgagg 52
>ref|XM_478770.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3199 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 ccccgagaccgacgcccacgccga 239 ||||||||||||||||| |||||| Sbjct: 156 ccccgagaccgacgcccccgccga 179
>gb|AY534122.1|SEG_AY534122S1 Aegilops tauschii transposon XJ, complete sequence; putative Bowman Birk trypsin inhibitor gene, complete cds; Stowaway MITE, complete sequence; and insertion sequences xl_tt1a and xl_tt1b putative ripening related protein genes, complete cds Length = 26073 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggcggccggaggaggagggg 108 |||||||||||||||||||| Sbjct: 5160 ggcggccggaggaggagggg 5179
>gb|AY022725.1| Oryza sativa microsatellite MRG5050 containing (CCG)X10, closest to marker R2561, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 ccccgagaccgacgcccacgccga 239 ||||||||||||||||| |||||| Sbjct: 165 ccccgagaccgacgcccccgccga 142
>gb|AC135409.3| Rattus norvegicus 8 BAC CH230-416D7 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 231716 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 agcccctgcatctagagaag 438 |||||||||||||||||||| Sbjct: 148492 agcccctgcatctagagaag 148473
>ref|XM_613703.2| PREDICTED: Bos taurus similar to F-box/WD-repeat protein 1A (F-box and WD-repeats protein beta-TrCP) (E3RSIkappaB) (pIkappaBalpha-E3 receptor subunit), transcript variant 2 (LOC534072), mRNA Length = 2282 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gaggaggaggggaggtgagg 116 |||||||||||||||||||| Sbjct: 2072 gaggaggaggggaggtgagg 2053
>ref|XM_879241.1| PREDICTED: Bos taurus similar to F-box/WD-repeat protein 1A (F-box and WD-repeats protein beta-TrCP) (E3RSIkappaB) (pIkappaBalpha-E3 receptor subunit), transcript variant 3 (LOC534072), mRNA Length = 1818 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gaggaggaggggaggtgagg 116 |||||||||||||||||||| Sbjct: 1608 gaggaggaggggaggtgagg 1589
>ref|XM_427314.1| PREDICTED: Gallus gallus similar to eukaryotic translation inititation factor 4B (LOC429759), partial mRNA Length = 1443 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gaggaggaggggaggtgagg 116 |||||||||||||||||||| Sbjct: 722 gaggaggaggggaggtgagg 703
>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete sequence Length = 130193 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 96 ggaggaggaggggaggtgaggagcgagc 123 ||||||||||||| |||| ||||||||| Sbjct: 12662 ggaggaggaggggtggtggggagcgagc 12635
>ref|NM_004384.2| Homo sapiens casein kinase 1, gamma 3 (CSNK1G3), transcript variant 1, mRNA Length = 4352 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cgccggcggccggaggagga 104 |||||||||||||||||||| Sbjct: 286 cgccggcggccggaggagga 267
>ref|NM_001031812.1| Homo sapiens casein kinase 1, gamma 3 (CSNK1G3), transcript variant 2, mRNA Length = 4280 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cgccggcggccggaggagga 104 |||||||||||||||||||| Sbjct: 286 cgccggcggccggaggagga 267
>gb|AC183432.1| Ornithorhynchus anatinus BAC clone OABb-35B8 from chromosome unknown, complete sequence Length = 142253 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 75 cccgaggcggcgccggcggccggaggag 102 |||| ||||||||||||||| ||||||| Sbjct: 68840 cccggggcggcgccggcggcgggaggag 68867
>ref|NM_181746.1| Homo sapiens LAG1 longevity assurance homolog 2 (S. cerevisiae) (LASS2), transcript variant 1, mRNA Length = 2392 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggaggaggg 107 ||||||||||||||| || ||||||||| Sbjct: 55 ggcggcgccggcggctggcggaggaggg 82
>ref|NM_013384.3| Homo sapiens LAG1 longevity assurance homolog 2 (S. cerevisiae) (LASS2), transcript variant 3, mRNA Length = 2178 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggaggaggg 107 ||||||||||||||| || ||||||||| Sbjct: 55 ggcggcgccggcggctggcggaggaggg 82
>ref|NM_022075.2| Homo sapiens LAG1 longevity assurance homolog 2 (S. cerevisiae) (LASS2), transcript variant 2, mRNA Length = 2352 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggaggaggg 107 ||||||||||||||| || ||||||||| Sbjct: 55 ggcggcgccggcggctggcggaggaggg 82
>gb|BC047567.1| Homo sapiens casein kinase 1, gamma 3, transcript variant 2, mRNA (cDNA clone MGC:48323 IMAGE:4817058), complete cds Length = 2717 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cgccggcggccggaggagga 104 |||||||||||||||||||| Sbjct: 24 cgccggcggccggaggagga 5
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 96 ggaggaggaggggaggtgaggagcgagc 123 ||||||||||||| |||| ||||||||| Sbjct: 25290046 ggaggaggaggggtggtggggagcgagc 25290073
>ref|XM_887910.2| PREDICTED: Mus musculus RIKEN cDNA A930035D04 gene (A930035D04Rik), mRNA Length = 3533 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggaggaggg 107 ||||||| ||||||| |||||||||||| Sbjct: 724 ggcggcggcggcggcgggaggaggaggg 697
>ref|XM_994391.1| PREDICTED: Mus musculus RIKEN cDNA A930035D04 gene (A930035D04Rik), mRNA Length = 3530 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggaggaggg 107 ||||||| ||||||| |||||||||||| Sbjct: 718 ggcggcggcggcggcgggaggaggaggg 691
>ref|XM_950349.1| Theileria annulata strain Ankara hypothetical protein (TA18080) partial mRNA Length = 1269 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 catgaccaagtccaagaacg 160 |||||||||||||||||||| Sbjct: 1026 catgaccaagtccaagaacg 1045
>emb|AL590133.32| Human DNA sequence from clone RP11-316M1 on chromosome 1 Contains the SETDB1 gene for SET domain, bifurcated 1, the LASS2 gene for LAG1 longevity assurance homolog 2 (S. cerevisiae), the ANXA9 gene for annexin A9, the gene for a novel protein (FLJ11280), the gene for TcD37 homolog (HTCD37), the BNIPL gene for BCL2/adenovirus E1B 19kD interacting protein like, the gene for a novel protein (FLJ20519), the gene for small protein effector 1 of Cdc42 (SPEC1), the gene for ALL1-fused gene from chromosome 1q (AF1Q), two novel genes, the 5' end of a novel gene (MGC29891) and two CpG islands, complete sequence Length = 192096 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggaggaggg 107 ||||||||||||||| || ||||||||| Sbjct: 60982 ggcggcgccggcggctggcggaggaggg 60955
>emb|AL021528.1|HS394P21 Human DNA sequence from clone RP3-394P21 on chromosome 1p36.12-36.13 Contains the PAX7 gene for Paired box gene 7 and two CpG islands, complete sequence Length = 136124 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aggaggaggggaggtgagga 117 |||||||||||||||||||| Sbjct: 86319 aggaggaggggaggtgagga 86338
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 194 ccgacgccaccgccggctccgaccccgagaccgacgcccacgccgacg 241 |||||||| ||||| | ||||| |||| |||||||||||||||||| Sbjct: 130872 ccgacgcccacgccgacgccgacgccgacgccgacgcccacgccgacg 130919
>ref|NM_031751.2| Rattus norvegicus SH3 and multiple ankyrin repeat domains 1 (Shank1), mRNA Length = 7585 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ggcggccggaggaggagggg 108 |||||||||||||||||||| Sbjct: 2945 ggcggccggaggaggagggg 2926
>gb|AY993941.1| Microbacterium arborescens strain SE 14 cosmid MAS10D5, complete sequence Length = 33203 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gaccgacgcccacgccgacg 241 |||||||||||||||||||| Sbjct: 31013 gaccgacgcccacgccgacg 31032
>gb|AY129337.1| Mycobacteriophage Bxz1, complete genome Length = 156102 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 ccgaccccgagaccgacgcc 231 |||||||||||||||||||| Sbjct: 27222 ccgaccccgagaccgacgcc 27241
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 agcggctcacccgaggcggcgccg 89 |||||| ||||||||||||||||| Sbjct: 1085835 agcggcgcacccgaggcggcgccg 1085812
>emb|AJ277468.1|OSA277468 Oryza sativa rbbi3-1 gene for putative Bowman Birk trypsin inhibitor Length = 17385 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggag 99 |||||||||||||||||||| Sbjct: 6429 ggcggcgccggcggccggag 6448
>gb|AC113336.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0011A24, from chromosome 10, complete sequence Length = 176832 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 144057 ggcggcggcggcggccggaggagg 144080 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 62034 ggcggcggcggcggccggaggagg 62057 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 53107 ggcggcggcggcggccggaggagg 53130 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 44205 ggcggcggcggcggccggaggagg 44228
>gb|AE006009.1| Caulobacter crescentus CB15 section 335 of 359 of the complete genome Length = 12052 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggag 99 |||||||||||||||||||| Sbjct: 8732 ggcggcgccggcggccggag 8751
>dbj|AK001105.1| Homo sapiens cDNA FLJ10243 fis, clone HEMBB1000631, weakly similar to LONGEVITY-ASSURANCE PROTEIN 1 Length = 2083 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggaggaggg 107 ||||||||||||||| || ||||||||| Sbjct: 58 ggcggcgccggcggctggcggaggaggg 85
>gb|AC092377.3| Homo sapiens chromosome 16 clone RP11-680G10, complete sequence Length = 207283 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ggaggaggggaggtgaggag 118 |||||||||||||||||||| Sbjct: 25210 ggaggaggggaggtgaggag 25229
>gb|AC106767.2| Homo sapiens chromosome 5 clone RP11-269M17, complete sequence Length = 143792 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 cgccggcggccggaggagga 104 |||||||||||||||||||| Sbjct: 70651 cgccggcggccggaggagga 70670
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggag 99 |||||||||||||||||||| Sbjct: 3467150 ggcggcgccggcggccggag 3467131
>dbj|AK080300.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630042M01 product:unclassifiable, full insert sequence Length = 2455 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggaggaggg 107 ||||||| ||||||| |||||||||||| Sbjct: 764 ggcggcggcggcggcgggaggaggaggg 737
>gb|AC026422.5| Homo sapiens chromosome 5 clone CTD-2169H9, complete sequence Length = 67542 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cgccggcggccggaggagga 104 |||||||||||||||||||| Sbjct: 33587 cgccggcggccggaggagga 33568
>gb|AF131951.1|AF131951 Rattus norvegicus Shank1a mRNA, complete cds Length = 7087 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ggcggccggaggaggagggg 108 |||||||||||||||||||| Sbjct: 2842 ggcggccggaggaggagggg 2823
>gb|BC105151.1| Bos taurus cDNA clone MGC:127453 IMAGE:7947054, complete cds Length = 1485 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cgccggcggccggaggagga 104 |||||||||||||||||||| Sbjct: 118 cgccggcggccggaggagga 99
>gb|AC154014.4| Mus musculus 6 BAC RP24-409C18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 161963 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggaggaggg 107 ||||||| ||||||| |||||||||||| Sbjct: 21956 ggcggcggcggcggcgggaggaggaggg 21929
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||||||||||| |||||||| Sbjct: 11188028 ggcggcgccggcggcgggaggagg 11188051
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cggcgccggcggccggagga 101 |||||||||||||||||||| Sbjct: 22153317 cggcgccggcggccggagga 22153298 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 19718678 ggcggcggcggcggccggaggagg 19718701 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggag 99 |||||||||||||||||||| Sbjct: 4201468 ggcggcgccggcggccggag 4201487
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 ccccgagaccgacgcccacgccga 239 ||||||||||||||||| |||||| Sbjct: 22918938 ccccgagaccgacgcccccgccga 22918915
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 96 ggaggaggaggggaggtgaggagcgagc 123 ||||||||||||| |||| ||||||||| Sbjct: 25381355 ggaggaggaggggtggtggggagcgagc 25381382
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cggcgccggcggccggagga 101 |||||||||||||||||||| Sbjct: 9867028 cggcgccggcggccggagga 9867047 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggag 99 |||||||||||||||||||| Sbjct: 1344787 ggcggcgccggcggccggag 1344768
>gb|AC092122.5| Homo sapiens chromosome 16 clone RP11-102F12, complete sequence Length = 174809 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 gaggaggggaggtgaggagc 119 |||||||||||||||||||| Sbjct: 60399 gaggaggggaggtgaggagc 60418
>gb|AF159046.1|AF159046 Rattus norvegicus SPANK-1 mRNA, complete cds Length = 7585 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ggcggccggaggaggagggg 108 |||||||||||||||||||| Sbjct: 2945 ggcggccggaggaggagggg 2926
>gb|AC144788.3| Ornithorhynchus anatinus clone OA_Bb-63M19, complete sequence Length = 122867 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cggcggccggaggaggaggg 107 |||||||||||||||||||| Sbjct: 106550 cggcggccggaggaggaggg 106569
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 agaccgacgcccacgccgac 240 |||||||||||||||||||| Sbjct: 6619543 agaccgacgcccacgccgac 6619562
>gb|AE004910.1| Pseudomonas aeruginosa PAO1, section 471 of 529 of the complete genome Length = 14999 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ccgacgagagcaaggccatc 255 |||||||||||||||||||| Sbjct: 3266 ccgacgagagcaaggccatc 3247
>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025D05 Length = 145684 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cggcgccggcggccggagga 101 |||||||||||||||||||| Sbjct: 131278 cggcgccggcggccggagga 131297
>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0003H10 Length = 142418 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cggcgccggcggccggagga 101 |||||||||||||||||||| Sbjct: 2794 cggcgccggcggccggagga 2813
>dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1590_E05 Length = 148205 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggag 99 |||||||||||||||||||| Sbjct: 101091 ggcggcgccggcggccggag 101110
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 caaacgcacactcccacgcg 30 |||||||||||||||||||| Sbjct: 8865545 caaacgcacactcccacgcg 8865564
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 ccgagaccgacgcccacgccgacg 241 ||||||||||| |||||||||||| Sbjct: 2021138 ccgagaccgacacccacgccgacg 2021161
>dbj|AP004855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1538_H05 Length = 132282 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 96 ggaggaggaggggaggtgaggagcgagc 123 ||||||||||||| |||| ||||||||| Sbjct: 50831 ggaggaggaggggtggtggggagcgagc 50858
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0037C04 Length = 137879 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggag 99 |||||||||||||||||||| Sbjct: 42838 ggcggcgccggcggccggag 42819
>dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445D12 Length = 140952 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggag 99 |||||||||||||||||||| Sbjct: 138441 ggcggcgccggcggccggag 138422
>dbj|AP005384.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_D02 Length = 112773 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ggccggaggaggaggggagg 111 |||||||||||||||||||| Sbjct: 5054 ggccggaggaggaggggagg 5035
>dbj|AP004775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0451A10 Length = 137046 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggaggaggggagg 111 ||||||| |||||| |||||||||||| |||| Sbjct: 75325 ggcggcggcggcgggcggaggaggaggcgagg 75356
>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0531C01 Length = 158574 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 ccgagaccgacgcccacgccgacg 241 |||||||||||||| ||||||||| Sbjct: 87270 ccgagaccgacgccgacgccgacg 87247
>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1019_E02 Length = 121607 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 ccccgagaccgacgcccacgccga 239 ||||||||||||||||| |||||| Sbjct: 112205 ccccgagaccgacgcccccgccga 112182
>dbj|AP005689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042H24 Length = 186313 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||||||||||| |||||||| Sbjct: 23200 ggcggcgccggcggcgggaggagg 23223
>dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0004P20 Length = 160410 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||||||||||| |||||||| Sbjct: 146835 ggcggcgccggcggcgggaggagg 146858
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 40.1 bits (20), Expect = 5.9 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 72 tcacccgaggcggcgccggcggccggaggaggaggggagg 111 ||||| ||||||||| |||||| |||||||||||||||| Sbjct: 50967 tcaccagaggcggcggcggcgga-ggaggaggaggggagg 51005
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 40.1 bits (20), Expect = 5.9 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 72 tcacccgaggcggcgccggcggccggaggaggaggggagg 111 ||||| ||||||||| |||||| |||||||||||||||| Sbjct: 134273 tcaccagaggcggcggcggcgga-ggaggaggaggggagg 134311
>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1568_B05 Length = 115325 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ggccggaggaggaggggagg 111 |||||||||||||||||||| Sbjct: 103139 ggccggaggaggaggggagg 103120
>gb|AE005067.1| Halobacterium sp. NRC-1 section 98 of 170 of the complete genome Length = 9980 Score = 40.1 bits (20), Expect = 5.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 57 caccgccgcagcggctcacccgaggcggcgccggcggccg 96 |||||||| |||| ||||| | ||||||||||||||||| Sbjct: 9148 caccgccggagcgtgtcaccggcggcggcgccggcggccg 9187
>dbj|AP005469.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0040I22 Length = 134273 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggaggaggggagg 111 ||||||| |||||| |||||||||||| |||| Sbjct: 121074 ggcggcggcggcgggcggaggaggaggcgagg 121105
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 47629 ggcggcggcggcggccggaggagg 47652
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cggcgccggcggccggagga 101 |||||||||||||||||||| Sbjct: 116280 cggcgccggcggccggagga 116261
>dbj|AK120058.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C08, full insert sequence Length = 3734 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 96 ggaggaggaggggaggtgaggagcgagc 123 ||||||||||||| |||| ||||||||| Sbjct: 301 ggaggaggaggggtggtggggagcgagc 328
>dbj|AK119444.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-C11, full insert sequence Length = 2949 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cggcgccggcggccggagga 101 |||||||||||||||||||| Sbjct: 1324 cggcgccggcggccggagga 1343
>dbj|AK108298.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-E09, full insert sequence Length = 1190 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggaggaggggagg 111 ||||||| |||||| |||||||||||| |||| Sbjct: 83 ggcggcggcggcgggcggaggaggaggcgagg 52
>dbj|AK104578.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B02, full insert sequence Length = 977 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 72 ggcggcggcggcggccggaggagg 49
>dbj|AK102726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105M03, full insert sequence Length = 938 Score = 40.1 bits (20), Expect = 5.9 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 77 cgaggcggcgccggcggccggaggaggagggg 108 |||||||||| ||||||| ||||||||||||| Sbjct: 355 cgaggcggcggcggcggc-ggaggaggagggg 385
>dbj|AK100076.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F09, full insert sequence Length = 3200 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 ccccgagaccgacgcccacgccga 239 ||||||||||||||||| |||||| Sbjct: 156 ccccgagaccgacgcccccgccga 179
>dbj|AK099367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051M06, full insert sequence Length = 983 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 78 ggcggcggcggcggccggaggagg 55
>dbj|AK069153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007J18, full insert sequence Length = 1816 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cggcgccggcggccggagga 101 |||||||||||||||||||| Sbjct: 950 cggcgccggcggccggagga 931
>dbj|AK067708.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118H02, full insert sequence Length = 2031 Score = 40.1 bits (20), Expect = 5.9 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Minus Query: 72 tcacccgaggcggcgccggcggccggaggaggaggggagg 111 ||||| ||||||||| |||||| |||||||||||||||| Sbjct: 676 tcaccagaggcggcggcggcgga-ggaggaggaggggagg 638
>dbj|AK065335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H01, full insert sequence Length = 1724 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||||||||||| |||||||| Sbjct: 75 ggcggcgccggcggcgggaggagg 52
>dbj|AK062394.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-D05, full insert sequence Length = 930 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ggcggcgccggcggccggag 99 |||||||||||||||||||| Sbjct: 261 ggcggcgccggcggccggag 280
>dbj|AK059631.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-A04, full insert sequence Length = 1096 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggagg 103 ||||||| |||||||||||||||| Sbjct: 74 ggcggcggcggcggccggaggagg 51
>gb|AF102855.2|AF102855 Rattus norvegicus synaptic SAPAP-interacting protein Synamon mRNA, complete cds Length = 6477 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ggcggccggaggaggagggg 108 |||||||||||||||||||| Sbjct: 2830 ggcggccggaggaggagggg 2811
>gb|AF039749.1|AF039749 Anas platyrhynchos carboxypeptidase D mRNA, complete cds Length = 4164 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 ggcgccggcggccggaggaggagg 106 |||| ||||||||||||||||||| Sbjct: 93 ggcggcggcggccggaggaggagg 116
>gb|AC003950.1|AC003950 Homo sapiens chromosome 17, clone hCIT.123_J_14, complete sequence Length = 117621 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gaaggaggtctacaaggcac 300 |||||||||||||||||||| Sbjct: 17593 gaaggaggtctacaaggcac 17574
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggag 99 |||||||||||||||||||| Sbjct: 1119987 ggcggcgccggcggccggag 1119968
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 ccgaggcggcgccggcggcc 95 |||||||||||||||||||| Sbjct: 3809131 ccgaggcggcgccggcggcc 3809112
>gb|AC154015.3| Mus musculus 6 BAC RP24-194J12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151119 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 80 ggcggcgccggcggccggaggaggaggg 107 ||||||| ||||||| |||||||||||| Sbjct: 134891 ggcggcggcggcggcgggaggaggaggg 134864
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 accgacgcccacgccgacga 242 |||||||||||||||||||| Sbjct: 2868113 accgacgcccacgccgacga 2868132 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,889,036 Number of Sequences: 3902068 Number of extensions: 3889036 Number of successful extensions: 94875 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 91402 Number of HSP's gapped (non-prelim): 3486 length of query: 439 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 417 effective length of database: 17,147,199,772 effective search space: 7150382304924 effective search space used: 7150382304924 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
