>TMEM1_HUMAN (P48553) Transmembrane protein 1 (Epilepsy holoprosencephaly|
           candidate 1 protein) (EHOC-1) (GT334 protein)
          Length = 1259

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
 Frame = +2

Query: 47  EWFIVFVSKAHPSNDQATKMAK-KVYARLEADFNTKKRERCCKFDLHGPDD----EFWDD 211
           +W IV V       ++   + +  +  ++  DF  K+ +RC        D     E W+ 
Sbjct: 122 DWLIVIVENDAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKDSSRTQESWNA 181

Query: 212 FDSKMVDCIRNTLDRRVQFYEEENRRLSEQRFTPIWNFCNFFILKESLAFMFEVTNLHED 391
           F +K+   +  +  + +  +E++ R L E+R  P W+FC +F+++E LAF+FE+    ED
Sbjct: 182 FLTKLRTLLLMSFTKNLGKFEDDMRTLREKRTEPGWSFCEYFMVQEELAFVFEMLQQFED 241

Query: 392 SLREYDELELCYS 430
           +L +YDEL+  +S
Sbjct: 242 ALVQYDELDALFS 254

>Y623_DROME (Q9VFB7) Hypothetical protein CG6623|
          Length = 1145

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
 Frame = +2

Query: 17  LKLIVQNDEREWFIVFVSKAHPSNDQATKMAKKVYARLEADFNTKKRERCCKFDLHGPDD 196
           LK +      +W I+ V        +       V  ++  DF TK  +RC         +
Sbjct: 100 LKTLTSYGVSDWMILLVETLDMRKTKNFMPRTTVLDKIRLDFGTKNDDRCISVLNPAKFE 159

Query: 197 EFWDDFDSKMVDCIR----NTLDRRVQFYEEENRRLSEQRFTPIWNFCNFFILKESLAFM 364
           +   +    +V  IR     + +R +  YEE  R   E+R    W+F  +F ++E LA +
Sbjct: 160 QKSTESFRCLVQRIRFLMLTSYNRNIVKYEELIRSKREKRNIEGWDFRQYFFMQEDLALI 219

Query: 365 FEVTNLHEDSLREYDELELCYS 430
           FE   L  ++L +YDEL+  +S
Sbjct: 220 FEKLELPTEALIQYDELDAMFS 241

>RNAS9_SAIBB (Q7YRG9) Ribonuclease-like protein 9 precursor|
          Length = 206

 Score = 34.7 bits (78), Expect = 0.10
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
 Frame = +2

Query: 176 DLHGPDDEFWDDFDSKMVDCIRNTLDRRVQFYEEENRRLSEQRFTPIWN--FCNFFILKE 349
           D + P     +DF+  +V+  ++T   R    E+  RR+      P+ +  +CN+ I+++
Sbjct: 33  DFYFPVSRTEEDFEDFLVE-FQSTGPTRPPTKEKVKRRILVNPGMPLGDSGYCNYQIMRK 91

Query: 350 SLAFMFEVTNLHEDSLREYDELE-LCYS 430
           ++ + +     H   L +YDELE  CY+
Sbjct: 92  NVYYKYSCVTEHYFLLMQYDELEKTCYN 119

>RNAS9_CEBCA (Q7YRG7) Ribonuclease-like protein 9 precursor|
          Length = 205

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
 Frame = +2

Query: 176 DLHGPDDEFWDDFDSKMVDCIRNTLDRRVQFYEEENRRLSEQRFTPIWN--FCNFFILKE 349
           D + P     +DF+  MV+  ++T   R    E+  RR+      P+ +  +CN+ I+++
Sbjct: 31  DFYFPAYRDKEDFEDFMVE-FQSTGPTRPPTKEKVKRRILVNPGMPLGDSGYCNYQIMRK 89

Query: 350 SLAFMFEVTNLHEDSLREYDELE-LCYS 430
           ++ + +     H   L +YDEL+  CY+
Sbjct: 90  NVYYKYSCVTEHYFLLMQYDELQKTCYN 117

>RNAS9_CEBAL (Q7YRG8) Ribonuclease-like protein 9 precursor|
          Length = 205

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
 Frame = +2

Query: 176 DLHGPDDEFWDDFDSKMVDCIRNTLDRRVQFYEEENRRLSEQRFTPIWN--FCNFFILKE 349
           D + P     +DF+  MV+  ++T   R    E+  RR+      P+ +  +CN+ I+++
Sbjct: 31  DFYFPAYSDKEDFEDFMVE-FQSTGPTRPPTKEKVKRRILVNPGMPLGDSGYCNYQIMRK 89

Query: 350 SLAFMFEVTNLHEDSLREYDELE-LCYS 430
           ++ + +     H   L +YDEL+  CY+
Sbjct: 90  NVYYKYSCVTEHYFLLMQYDELQKTCYN 117

>PHSG_AQUAE (O66932) Glycogen phosphorylase (EC 2.4.1.1)|
          Length = 692

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +2

Query: 14  RLKLIVQNDEREWFIVFVSKAHPSNDQATKMAKKVY 121
           RLK IV + ER   I+F  KAHP++ +  K+ ++++
Sbjct: 501 RLKKIVNDSERPVQIIFAGKAHPADIEGKKIIQRIF 536

>VP2_AHSV4 (P32553) Outer capsid protein VP2|
          Length = 1060

 Score = 32.0 bits (71), Expect = 0.65
 Identities = 13/24 (54%), Positives = 20/24 (83%)
 Frame = +2

Query: 218 SKMVDCIRNTLDRRVQFYEEENRR 289
           S+ +D IRN + +RV+FYEEE++R
Sbjct: 141 SQKLDRIRNYIGKRVEFYEEESKR 164

>RNAS9_PAPAN (Q863J8) Ribonuclease-like protein 9 precursor|
          Length = 204

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
 Frame = +2

Query: 176 DLHGPDDEFWDDFDSKMVDCIRNTLDRRVQFYEEENRRLSEQRFTPIW--NFCNFFILKE 349
           D   PDD+  ++F+  + +  R T   R    E+  RR+  +   P++  N+CN  I+++
Sbjct: 32  DFDSPDDDM-EEFEEYLEEFHR-TGPTRPPTKEKVERRVLIEPGMPLYDRNYCNEEIMRK 89

Query: 350 SLAFMFEVTNLHEDSLREYDELE-LCYS 430
           ++         H   L +YDEL+ +CY+
Sbjct: 90  NVYHKQRCVTEHYFLLMQYDELQKICYN 117

>ZG16_XENLA (P18712) Gastrula zinc finger protein XLCGF16.1 (Fragment)|
          Length = 112

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 299 AHLTCGFPLHRTEPFYPMCFLCSPPFSSQNHPRIHHQVH 183
           +HL      H  E  + +CF C   F+S++H   HH+ H
Sbjct: 75  SHLNSHHKTHTGEKSF-LCFACGKCFASRSHLTAHHRTH 112

>ZN683_HUMAN (Q8IZ20) Zinc finger protein 683|
          Length = 509

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 245 CFLCSPPFSSQNHPRIHHQVHADQIC 168
           C +C   F+   H ++HH++HA Q C
Sbjct: 413 CSVCRSRFTQHIHLKLHHRLHAPQPC 438

>RNAS9_CERAE (Q7YRH1) Ribonuclease-like protein 9 precursor|
          Length = 204

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
 Frame = +2

Query: 176 DLHGPDDEFWDDFDSKMVDCIRNTLDRRVQFYEEENRRLSEQRFTPIWN--FCNFFILKE 349
           D   PDDE  ++ +  + +  ++T   R    E   RR+  +   P+++  +CN  I ++
Sbjct: 32  DFDSPDDEM-EELEEYLEE-FQSTGPTRPPTKENVERRVIIEPGMPLYDRDYCNEEIKRK 89

Query: 350 SLAFMFEVTNLHEDSLREYDELE-LCYS 430
           ++   +     H   L +YDEL+ +CY+
Sbjct: 90  NVYHKYRCVTEHYFLLMQYDELQKICYN 117

>RNAS9_MACAS (Q863J7) Ribonuclease-like protein 9 precursor|
          Length = 203

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
 Frame = +2

Query: 176 DLHGPDDEFWDDFDSKMVDCIRNTLDRRVQFYEEENRRLSEQRFTPIWN--FCNFFILKE 349
           D   PDDE  ++ +  + +  ++T   R    E   RR+  +   P+++  +CN  I ++
Sbjct: 31  DFDSPDDEM-EELEEYLEE-FQSTGPTRPPTKENVERRVIIEPGMPLYDRDYCNEEIKRK 88

Query: 350 SLAFMFEVTNLHEDSLREYDELE-LCYS 430
           ++   +     H   L +YDEL+ +CY+
Sbjct: 89  NVYHKYRCVTEHYFLLMQYDELQKICYN 116

>RNAS9_MACMU (Q7YRH3) Ribonuclease-like protein 9 precursor|
          Length = 204

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
 Frame = +2

Query: 176 DLHGPDDEFWDDFDSKMVDCIRNTLDRRVQFYEEENRRLSEQRFTPIWN--FCNFFILKE 349
           D   P+D+  ++F   + +  R T   R    E+  RR+  +   P+++  +CN  I+++
Sbjct: 32  DFDSPEDKM-EEFREYLEE-FRRTGPTRPPTKEKVERRVIIEPGMPLYHRDYCNEEIMRK 89

Query: 350 SLAFMFEVTNLHEDSLREYDELE-LCYS 430
           ++         H   L +YDELE +CY+
Sbjct: 90  NVYHKQRCVTEHYFLLMQYDELEKICYN 117

>RNAS9_MACNE (Q7YRH2) Ribonuclease-like protein 9 precursor|
          Length = 204

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
 Frame = +2

Query: 176 DLHGPDDEFWDDFDSKMVDCIRNTLDRRVQFYEEENRRLSEQRFTPIWN--FCNFFILKE 349
           D   P+D+  ++F   + +  R T   R    E+  RR+  +   P+++  +CN  I+++
Sbjct: 32  DFETPEDKM-EEFREYLEE-FRRTGPTRPPTKEKVERRVIIEPGMPLYHRDYCNEEIMRK 89

Query: 350 SLAFMFEVTNLHEDSLREYDELE-LCYS 430
           ++         H   L +YDELE +CY+
Sbjct: 90  NVYHKQRCVTEHYFLLMQYDELEKICYN 117

>TNR9_MOUSE (P20334) Tumor necrosis factor receptor superfamily member 9|
           precursor (4-1BB ligand receptor) (T-cell antigen 4-1BB)
           (CD137 antigen)
          Length = 256

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = -3

Query: 207 SQNSSSGPCRSNLQHLSLFLVLKSASSLAYTFFAILVA*SLLGW 76
           S     GP   +LQ L+LFL L SA  LA  F  +L   S+L W
Sbjct: 172 SVTPEGGPGGHSLQVLTLFLALTSALLLALIFITLLF--SVLKW 213

>ISPE_BACFR (Q64T40) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 274

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +2

Query: 5   LKPRLKLIVQNDEREWFIVFVSKAHPSNDQATKMAKKVYARLEADF 142
           L+  L++ + ND ++ F++  S    S +  T +  K Y  LE +F
Sbjct: 35  LEDALEITILNDSKQKFVLHQSGLEISGEPETNLVVKAYLLLEQEF 80

>ISPE_BACFN (Q5LC56) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 274

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +2

Query: 5   LKPRLKLIVQNDEREWFIVFVSKAHPSNDQATKMAKKVYARLEADF 142
           L+  L++ + ND ++ F++  S    S +  T +  K Y  LE +F
Sbjct: 35  LEDALEITILNDSKQKFVLHQSGLEISGEPETNLVVKAYLLLEQEF 80

>NAT1_YEAST (P12945) N-terminal acetyltransferase 1 (EC 2.3.1.88)|
           (Amino-terminal, alpha-amino, acetyltransferase 1)
          Length = 853

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
 Frame = +2

Query: 86  NDQATKMAKKVYARLEADFNTKKRERCCKFDLHGPDDEFWDDFDSKMVDCIRNTLDRRVQ 265
           N+     ++K  A+ EA    K++E   K     P D+  D F  K+++      D   +
Sbjct: 638 NNGQNSSSQKKKAKKEAAAMNKRKETEAKSVAAYPSDQDNDVFGEKLIETSTPMEDFATE 697

Query: 266 FYEEENRRLSEQRFTPIWNF-CNFFILKESLAF 361
           FY   + ++ E     I +F  N+ I K +L F
Sbjct: 698 FYNNYSMQVREDERDYILDFEFNYRIGKLALCF 730

>ZN454_HUMAN (Q8N9F8) Zinc finger protein 454|
          Length = 522

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = -1

Query: 347 PSE*KSCRSSISV*IAAHLTCGFPLHRTE-PFYPMCFLCSPPFSSQNHPRIHHQVHADQ 174
           P E K C  + SV  ++ LT    +H  E PF   C LC   F    H   HH++H  +
Sbjct: 243 PYECKECGKAFSV--SSSLTYHQKIHTGEKPFE--CNLCGKAFIRNIHLAHHHRIHTGE 297

>IL1R2_HUMAN (P27930) Interleukin-1 receptor type II precursor (IL-1R-2)|
           (IL-1R-beta) (CD121b antigen) (CDw121b)
          Length = 398

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +3

Query: 51  GSLYLCRRPILAMIKQLRWQRKYTLGLRPISTLKREKGAANLICMDLMMNSGMILTRK-W 227
           G  Y   R I   IK+ + +    + + P+ T+    G+   I   + + +G  LT   W
Sbjct: 215 GQQYNITRSIELRIKKKK-EETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLW 273

Query: 228 WTA*ETH 248
           WTA +TH
Sbjct: 274 WTANDTH 280

>VG14_BPPH2 (P11188) Lysis protein (Late protein GP14)|
          Length = 131

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 277 LFIELNPSIQCVSYAVHHFRVKIIPEFIIRSMQIKFAAPF 158
           LF +LNP+I+  S+ +    +  + E I+  + I FA PF
Sbjct: 38  LFAKLNPNIKFSSFKIKTGVLIKVSEMILALLAIPFAVPF 77


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,440,458
Number of Sequences: 219361
Number of extensions: 1061645
Number of successful extensions: 3558
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3557
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)