>dbj|AK072345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049N15, full
           insert sequence
          Length = 4187

 Score =  593 bits (299), Expect = e-166
 Identities = 398/431 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   cattcttaagcctcgcctcaaattaattgtgcaaaatgatgagagagaatggttcattgt 60
           |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 502 cattcttaagcctcgcctcaaattgattgtgcaaaatgatgagagggaatggttcattgt 561

                                                                       
Query: 61  atttgtgtcgaaggcccatcctagcaatgatcaagcaactaagatggcaaagaaagtata 120
           ||||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||||||
Sbjct: 562 atttgtgtctaaggcccatcctagcaatgaccaagcatctaagatggcaaagagagtata 621

                                                                       
Query: 121 cgctaggcttgaggccgatttcaacactaaaaagagagaaaggtgctgcaaatttgatct 180
            ||||||||||||  |||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 622 tgctaggcttgagagcgatttcaacactaaaaaaagagaaagatgctgtaaatttgatct 681

                                                                       
Query: 181 gcatggacctgatgatgaattctgggatgattttgactcgaaaatggtggactgcataag 240
            |||||||||||||  ||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 682 ccatggacctgatgcggaattctgggatgattttgactccaaaatggtggactgcattag 741

                                                                       
Query: 241 aaacacattggatagaagggttcagttctatgaagaggaaaaccgcaggttaagtgagca 300
           |||||||||||||||  ||||||| || |||||||||||||  |||||||||||||||||
Sbjct: 742 aaacacattggataggcgggttcaattttatgaagaggaaattcgcaggttaagtgagca 801

                                                                       
Query: 301 gcgattcacaccgatatggaacttctgcaactttttcattctgaaggaaagtttggcatt 360
           | ||||||| |||||||||||||||||||||||||| ||||| |||||||| ||||| ||
Sbjct: 802 gagattcactccgatatggaacttctgcaacttttttattcttaaggaaagcttggcttt 861

                                                                       
Query: 361 tatgtttgaggtgactaatcttcatgaagattcactccgtgaatacgatgagcttgaact 420
            ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 862 catgtttgagatgactaatcttcatgaagattcactccgtgaatacgacgagcttgaact 921

                      
Query: 421 atgctattcag 431
           |||||| ||||
Sbjct: 922 atgctactcag 932

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  246 bits (124), Expect = 5e-62
 Identities = 154/164 (93%)
 Strand = Plus / Minus

                                                                            
Query: 1        cattcttaagcctcgcctcaaattaattgtgcaaaatgatgagagagaatggttcattgt 60
                |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 22561717 cattcttaagcctcgcctcaaattgattgtgcaaaatgatgagagggaatggttcattgt 22561658

                                                                            
Query: 61       atttgtgtcgaaggcccatcctagcaatgatcaagcaactaagatggcaaagaaagtata 120
                ||||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||||||
Sbjct: 22561657 atttgtgtctaaggcccatcctagcaatgaccaagcatctaagatggcaaagagagtata 22561598

                                                            
Query: 121      cgctaggcttgaggccgatttcaacactaaaaagagagaaaggt 164
                 ||||||||||||  |||||||||||||||||| ||||||||||
Sbjct: 22561597 tgctaggcttgagagcgatttcaacactaaaaaaagagaaaggt 22561554



 Score =  238 bits (120), Expect = 1e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                            
Query: 164      tgctgcaaatttgatctgcatggacctgatgatgaattctgggatgattttgactcgaaa 223
                ||||| ||||||||||| |||||||||||||  ||||||||||||||||||||||| |||
Sbjct: 22561307 tgctgtaaatttgatctccatggacctgatgcggaattctgggatgattttgactccaaa 22561248

                                                                            
Query: 224      atggtggactgcataagaaacacattggatagaagggttcagttctatgaagaggaaaac 283
                |||||||||||||| |||||||||||||||||  ||||||| || |||||||||||||  
Sbjct: 22561247 atggtggactgcattagaaacacattggataggcgggttcaattttatgaagaggaaatt 22561188

                                                                            
Query: 284      cgcaggttaagtgagcagcgattcacaccgatatggaacttctgcaactttttcattctg 343
                |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| 
Sbjct: 22561187 cgcaggttaagtgagcagagattcactccgatatggaacttctgcaacttttttattctt 22561128

                    
Query: 344      aagg 347
                ||||
Sbjct: 22561127 aagg 22561124



 Score =  125 bits (63), Expect = 1e-25
 Identities = 81/87 (93%)
 Strand = Plus / Minus

                                                                            
Query: 345      aggaaagtttggcatttatgtttgaggtgactaatcttcatgaagattcactccgtgaat 404
                ||||||| ||||| || ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 22560999 aggaaagcttggctttcatgtttgagatgactaatcttcatgaagattcactccgtgaat 22560940

                                           
Query: 405      acgatgagcttgaactatgctattcag 431
                |||| ||||||||||||||||| ||||
Sbjct: 22560939 acgacgagcttgaactatgctactcag 22560913



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 49       atggttcattgtatttgtgtc 69
                |||||||||||||||||||||
Sbjct: 23581993 atggttcattgtatttgtgtc 23582013

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  246 bits (124), Expect = 5e-62
 Identities = 154/164 (93%)
 Strand = Plus / Minus

                                                                            
Query: 1        cattcttaagcctcgcctcaaattaattgtgcaaaatgatgagagagaatggttcattgt 60
                |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 22490062 cattcttaagcctcgcctcaaattgattgtgcaaaatgatgagagggaatggttcattgt 22490003

                                                                            
Query: 61       atttgtgtcgaaggcccatcctagcaatgatcaagcaactaagatggcaaagaaagtata 120
                ||||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||||||
Sbjct: 22490002 atttgtgtctaaggcccatcctagcaatgaccaagcatctaagatggcaaagagagtata 22489943

                                                            
Query: 121      cgctaggcttgaggccgatttcaacactaaaaagagagaaaggt 164
                 ||||||||||||  |||||||||||||||||| ||||||||||
Sbjct: 22489942 tgctaggcttgagagcgatttcaacactaaaaaaagagaaaggt 22489899



 Score =  238 bits (120), Expect = 1e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                            
Query: 164      tgctgcaaatttgatctgcatggacctgatgatgaattctgggatgattttgactcgaaa 223
                ||||| ||||||||||| |||||||||||||  ||||||||||||||||||||||| |||
Sbjct: 22489652 tgctgtaaatttgatctccatggacctgatgcggaattctgggatgattttgactccaaa 22489593

                                                                            
Query: 224      atggtggactgcataagaaacacattggatagaagggttcagttctatgaagaggaaaac 283
                |||||||||||||| |||||||||||||||||  ||||||| || |||||||||||||  
Sbjct: 22489592 atggtggactgcattagaaacacattggataggcgggttcaattttatgaagaggaaatt 22489533

                                                                            
Query: 284      cgcaggttaagtgagcagcgattcacaccgatatggaacttctgcaactttttcattctg 343
                |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| 
Sbjct: 22489532 cgcaggttaagtgagcagagattcactccgatatggaacttctgcaacttttttattctt 22489473

                    
Query: 344      aagg 347
                ||||
Sbjct: 22489472 aagg 22489469



 Score =  125 bits (63), Expect = 1e-25
 Identities = 81/87 (93%)
 Strand = Plus / Minus

                                                                            
Query: 345      aggaaagtttggcatttatgtttgaggtgactaatcttcatgaagattcactccgtgaat 404
                ||||||| ||||| || ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 22489344 aggaaagcttggctttcatgtttgagatgactaatcttcatgaagattcactccgtgaat 22489285

                                           
Query: 405      acgatgagcttgaactatgctattcag 431
                |||| ||||||||||||||||| ||||
Sbjct: 22489284 acgacgagcttgaactatgctactcag 22489258



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 49       atggttcattgtatttgtgtc 69
                |||||||||||||||||||||
Sbjct: 23510184 atggttcattgtatttgtgtc 23510204

>emb|AL954871.5|CNS08CDA Oryza sativa chromosome 12, . BAC OSJNBb0085B24 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131441

 Score =  246 bits (124), Expect = 5e-62
 Identities = 154/164 (93%)
 Strand = Plus / Minus

                                                                         
Query: 1     cattcttaagcctcgcctcaaattaattgtgcaaaatgatgagagagaatggttcattgt 60
             |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 64296 cattcttaagcctcgcctcaaattgattgtgcaaaatgatgagagggaatggttcattgt 64237

                                                                         
Query: 61    atttgtgtcgaaggcccatcctagcaatgatcaagcaactaagatggcaaagaaagtata 120
             ||||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||||||
Sbjct: 64236 atttgtgtctaaggcccatcctagcaatgaccaagcatctaagatggcaaagagagtata 64177

                                                         
Query: 121   cgctaggcttgaggccgatttcaacactaaaaagagagaaaggt 164
              ||||||||||||  |||||||||||||||||| ||||||||||
Sbjct: 64176 tgctaggcttgagagcgatttcaacactaaaaaaagagaaaggt 64133



 Score =  238 bits (120), Expect = 1e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                         
Query: 164   tgctgcaaatttgatctgcatggacctgatgatgaattctgggatgattttgactcgaaa 223
             ||||| ||||||||||| |||||||||||||  ||||||||||||||||||||||| |||
Sbjct: 63886 tgctgtaaatttgatctccatggacctgatgcggaattctgggatgattttgactccaaa 63827

                                                                         
Query: 224   atggtggactgcataagaaacacattggatagaagggttcagttctatgaagaggaaaac 283
             |||||||||||||| |||||||||||||||||  ||||||| || |||||||||||||  
Sbjct: 63826 atggtggactgcattagaaacacattggataggcgggttcaattttatgaagaggaaatt 63767

                                                                         
Query: 284   cgcaggttaagtgagcagcgattcacaccgatatggaacttctgcaactttttcattctg 343
             |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| 
Sbjct: 63766 cgcaggttaagtgagcagagattcactccgatatggaacttctgcaacttttttattctt 63707

                 
Query: 344   aagg 347
             ||||
Sbjct: 63706 aagg 63703



 Score =  125 bits (63), Expect = 1e-25
 Identities = 81/87 (93%)
 Strand = Plus / Minus

                                                                         
Query: 345   aggaaagtttggcatttatgtttgaggtgactaatcttcatgaagattcactccgtgaat 404
             ||||||| ||||| || ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 63578 aggaaagcttggctttcatgtttgagatgactaatcttcatgaagattcactccgtgaat 63519

                                        
Query: 405   acgatgagcttgaactatgctattcag 431
             |||| ||||||||||||||||| ||||
Sbjct: 63518 acgacgagcttgaactatgctactcag 63492

>emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa0027H05 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 138368

 Score =  246 bits (124), Expect = 5e-62
 Identities = 154/164 (93%)
 Strand = Plus / Minus

                                                                        
Query: 1    cattcttaagcctcgcctcaaattaattgtgcaaaatgatgagagagaatggttcattgt 60
            |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 6991 cattcttaagcctcgcctcaaattgattgtgcaaaatgatgagagggaatggttcattgt 6932

                                                                        
Query: 61   atttgtgtcgaaggcccatcctagcaatgatcaagcaactaagatggcaaagaaagtata 120
            ||||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||||||
Sbjct: 6931 atttgtgtctaaggcccatcctagcaatgaccaagcatctaagatggcaaagagagtata 6872

                                                        
Query: 121  cgctaggcttgaggccgatttcaacactaaaaagagagaaaggt 164
             ||||||||||||  |||||||||||||||||| ||||||||||
Sbjct: 6871 tgctaggcttgagagcgatttcaacactaaaaaaagagaaaggt 6828



 Score =  238 bits (120), Expect = 1e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                        
Query: 164  tgctgcaaatttgatctgcatggacctgatgatgaattctgggatgattttgactcgaaa 223
            ||||| ||||||||||| |||||||||||||  ||||||||||||||||||||||| |||
Sbjct: 6581 tgctgtaaatttgatctccatggacctgatgcggaattctgggatgattttgactccaaa 6522

                                                                        
Query: 224  atggtggactgcataagaaacacattggatagaagggttcagttctatgaagaggaaaac 283
            |||||||||||||| |||||||||||||||||  ||||||| || |||||||||||||  
Sbjct: 6521 atggtggactgcattagaaacacattggataggcgggttcaattttatgaagaggaaatt 6462

                                                                        
Query: 284  cgcaggttaagtgagcagcgattcacaccgatatggaacttctgcaactttttcattctg 343
            |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| 
Sbjct: 6461 cgcaggttaagtgagcagagattcactccgatatggaacttctgcaacttttttattctt 6402

                
Query: 344  aagg 347
            ||||
Sbjct: 6401 aagg 6398



 Score =  125 bits (63), Expect = 1e-25
 Identities = 81/87 (93%)
 Strand = Plus / Minus

                                                                        
Query: 345  aggaaagtttggcatttatgtttgaggtgactaatcttcatgaagattcactccgtgaat 404
            ||||||| ||||| || ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 6273 aggaaagcttggctttcatgtttgagatgactaatcttcatgaagattcactccgtgaat 6214

                                       
Query: 405  acgatgagcttgaactatgctattcag 431
            |||| ||||||||||||||||| ||||
Sbjct: 6213 acgacgagcttgaactatgctactcag 6187

>ref|NM_124824.3| Arabidopsis thaliana unknown protein AT5G54440 mRNA, complete cds
          Length = 4033

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 114/136 (83%)
 Strand = Plus / Plus

                                                                       
Query: 293 agtgagcagcgattcacaccgatatggaacttctgcaactttttcattctgaaggaaagt 352
           ||||||||||| || |  || ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 727 agtgagcagcggtttatgccaatatggaacttttgtaactttttcatcctgaaggaaagt 786

                                                                       
Query: 353 ttggcatttatgtttgaggtgactaatcttcatgaagattcactccgtgaatacgatgag 412
           ||||| || || |||||| || || |||||||||||||| || | |||||||| ||||| 
Sbjct: 787 ttggctttcatatttgagatggctcatcttcatgaagatgcattacgtgaatatgatgaa 846

                           
Query: 413 cttgaactatgctatt 428
           || || || |||||||
Sbjct: 847 ctagagctctgctatt 862



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 123/149 (82%)
 Strand = Plus / Plus

                                                                       
Query: 20  aaattaattgtgcaaaatgatgagagagaatggttcattgtatttgtgtcgaaggcccat 79
           ||||||||||| || ||||||||||| |||||||| ||||||||||| || || || |||
Sbjct: 454 aaattaattgttcagaatgatgagagggaatggtttattgtatttgtatctaaagctcat 513

                                                                       
Query: 80  cctagcaatgatcaagcaactaagatggcaaagaaagtatacgctaggcttgaggccgat 139
           || || ||||||||||||||||| |  |  ||||||||||| || | |||||| |  || 
Sbjct: 514 ccaagtaatgatcaagcaactaaaaatgtcaagaaagtatatgcgaagcttgaagttgac 573

                                        
Query: 140 ttcaacactaaaaagagagaaaggtgctg 168
           ||||   | ||||||||||||||||||||
Sbjct: 574 ttcagttcaaaaaagagagaaaggtgctg 602

>gb|AY090975.1| Arabidopsis thaliana At5g54440 mRNA sequence
          Length = 4025

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 114/136 (83%)
 Strand = Plus / Plus

                                                                       
Query: 293 agtgagcagcgattcacaccgatatggaacttctgcaactttttcattctgaaggaaagt 352
           ||||||||||| || |  || ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 727 agtgagcagcggtttatgccaatatggaacttttgtaactttttcatcctgaaggaaagt 786

                                                                       
Query: 353 ttggcatttatgtttgaggtgactaatcttcatgaagattcactccgtgaatacgatgag 412
           ||||| || || |||||| || || |||||||||||||| || | |||||||| ||||| 
Sbjct: 787 ttggctttcatatttgagatggctcatcttcatgaagatgcattacgtgaatatgatgaa 846

                           
Query: 413 cttgaactatgctatt 428
           || || || |||||||
Sbjct: 847 ctagagctctgctatt 862



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 123/149 (82%)
 Strand = Plus / Plus

                                                                       
Query: 20  aaattaattgtgcaaaatgatgagagagaatggttcattgtatttgtgtcgaaggcccat 79
           ||||||||||| || ||||||||||| |||||||| ||||||||||| || || || |||
Sbjct: 454 aaattaattgttcagaatgatgagagggaatggtttattgtatttgtatctaaagctcat 513

                                                                       
Query: 80  cctagcaatgatcaagcaactaagatggcaaagaaagtatacgctaggcttgaggccgat 139
           || || ||||||||||||||||| |  |  ||||||||||| || | |||||| |  || 
Sbjct: 514 ccaagtaatgatcaagcaactaaaaatgtcaagaaagtatatgcgaagcttgaagttgac 573

                                        
Query: 140 ttcaacactaaaaagagagaaaggtgctg 168
           ||||   | ||||||||||||||||||||
Sbjct: 574 ttcagttcaaaaaagagagaaaggtgctg 602

>dbj|AB026634.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F24B18
          Length = 50524

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                         
Query: 20    aaattaattgtgcaaaatgatgagagagaatggttcattgtatttgtgtcgaaggcccat 79
             ||||||||||| || ||||||||||| |||||||| ||||||||||| || || || |||
Sbjct: 17503 aaattaattgttcagaatgatgagagggaatggtttattgtatttgtatctaaagctcat 17562

                                    
Query: 80    cctagcaatgatcaagcaactaa 102
             || || |||||||||||||||||
Sbjct: 17563 ccaagtaatgatcaagcaactaa 17585



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 70/84 (83%)
 Strand = Plus / Plus

                                                                         
Query: 345   aggaaagtttggcatttatgtttgaggtgactaatcttcatgaagattcactccgtgaat 404
             ||||||||||||| || || |||||| || || |||||||||||||| || | |||||||
Sbjct: 18460 aggaaagtttggctttcatatttgagatggctcatcttcatgaagatgcattacgtgaat 18519

                                     
Query: 405   acgatgagcttgaactatgctatt 428
             | ||||| || || || |||||||
Sbjct: 18520 atgatgaactagagctctgctatt 18543



 Score = 46.1 bits (23), Expect = 0.094
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                    
Query: 293   agtgagcagcgattcacaccgatatggaacttctgcaactttttcattctgaagg 347
             ||||||||||| || |  || ||||||||||| || ||||||||||| |||||||
Sbjct: 18136 agtgagcagcggtttatgccaatatggaacttttgtaactttttcatcctgaagg 18190

>ref|NM_005986.2| Homo sapiens SRY (sex determining region Y)-box 1 (SOX1), mRNA
          Length = 4108

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 391  ttcactccgtgaatacgatgag 412
            ||||||||||||||||||||||
Sbjct: 4045 ttcactccgtgaatacgatgag 4024

>emb|AL138691.15| Human DNA sequence from clone RP11-310D8 on chromosome 13 Contains the
             SOX1 gene for SRY (sex determining region Y)-box 1 protein
             and 7 CpG islands, complete sequence
          Length = 147665

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 391   ttcactccgtgaatacgatgag 412
             ||||||||||||||||||||||
Sbjct: 11863 ttcactccgtgaatacgatgag 11884

>emb|AL844218.7| Mouse DNA sequence from clone RP23-409B1 on chromosome 4, complete
             sequence
          Length = 197419

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 22    attaattgtgcaaaatgatgag 43
             ||||||||||||||||||||||
Sbjct: 76530 attaattgtgcaaaatgatgag 76509

>gb|AC119935.17| Mus musculus chromosome 15, clone RP24-261L5, complete sequence
          Length = 163746

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 142   caacactaaaaagagagaaag 162
             |||||||||||||||||||||
Sbjct: 41904 caacactaaaaagagagaaag 41924

>gb|AC005771.1|AC005771 Homo sapiens chromosome 17, clone hRPK.1058_G_23, complete sequence
          Length = 190434

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 330   actttttcattctgaaggaaa 350
             |||||||||||||||||||||
Sbjct: 87644 actttttcattctgaaggaaa 87664

>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 157690

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 49     atggttcattgtatttgtgtc 69
              |||||||||||||||||||||
Sbjct: 124417 atggttcattgtatttgtgtc 124397

>gb|AC138221.23| Mus musculus chromosome 15, clone RP23-204C16, complete sequence
          Length = 239740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 142  caacactaaaaagagagaaag 162
            |||||||||||||||||||||
Sbjct: 9219 caacactaaaaagagagaaag 9199

>gb|AC120404.25| Mus musculus chromosome 6, clone RP24-405O23, complete sequence
          Length = 202146

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    ttctgaaggaaagtttggca 358
              ||||||||||||||||||||
Sbjct: 115491 ttctgaaggaaagtttggca 115472

>gb|AC121495.11| Mus musculus chromosome 18, clone RP24-181M14, complete sequence
          Length = 195507

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    aaacacattggatagaaggg 260
              ||||||||||||||||||||
Sbjct: 124596 aaacacattggatagaaggg 124577

>emb|CT010587.5| Mouse DNA sequence from clone RP23-307A6 on chromosome 17, complete
              sequence
          Length = 173949

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    tgatgatgaattctgggatg 209
              ||||||||||||||||||||
Sbjct: 111590 tgatgatgaattctgggatg 111609

>gb|AC114820.4| Mus musculus BAC clone RP23-70M6 from 18, complete sequence
          Length = 174470

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 336  tcattctgaaggaaagtttg 355
            ||||||||||||||||||||
Sbjct: 6001 tcattctgaaggaaagtttg 6020

>emb|AL356741.11| Human DNA sequence from clone RP11-474D14 on chromosome 10 Contains
             part of the gene for a novel protein (KIAA0032), a
             ribosomal protein S3A (RPS3A) pseudogene and a pseudogene
             similar to part of POU domain containing protein, complete
             sequence
          Length = 87244

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   tttttcattctgaaggaaag 351
             ||||||||||||||||||||
Sbjct: 80214 tttttcattctgaaggaaag 80195

>gb|AC155261.3| Mus musculus BAC clone RP24-66D10 from chromosome 18, complete
            sequence
          Length = 207400

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 334  tttcattctgaaggaaagtt 353
            ||||||||||||||||||||
Sbjct: 2248 tttcattctgaaggaaagtt 2229

>gb|AC093303.2| Homo sapiens chromosome 5 clone RP11-61K20, complete sequence
          Length = 163590

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   caacactaaaaagagagaaa 161
             ||||||||||||||||||||
Sbjct: 44951 caacactaaaaagagagaaa 44932

>emb|AJ330778.1|HSA330778 Homo sapiens genomic sequence surrounding NotI site, clone NL1-CC2R
          Length = 949

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 tatacgctaggcttgaggcc 136
           ||||||||||||||||||||
Sbjct: 794 tatacgctaggcttgaggcc 813

>emb|CT485603.4| RP43-005L22, complete sequence
          Length = 204041

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 atggtggactgcataagaaa 243
           ||||||||||||||||||||
Sbjct: 635 atggtggactgcataagaaa 616

>gb|AC154790.2| Mus musculus BAC clone RP24-481A4 from 17, complete sequence
          Length = 194675

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   tgatgatgaattctgggatg 209
             ||||||||||||||||||||
Sbjct: 82639 tgatgatgaattctgggatg 82658

>gb|AC148002.3| Mus musculus BAC clone RP23-478M1 from 18, complete sequence
          Length = 200845

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   tttcattctgaaggaaagtt 353
             ||||||||||||||||||||
Sbjct: 74392 tttcattctgaaggaaagtt 74373

>emb|CT033752.6| Mouse DNA sequence from clone RP23-140I20 on chromosome 17, complete
             sequence
          Length = 216455

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   tgatgatgaattctgggatg 209
             ||||||||||||||||||||
Sbjct: 53252 tgatgatgaattctgggatg 53271


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,500,151
Number of Sequences: 3902068
Number of extensions: 4500151
Number of successful extensions: 87117
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86995
Number of HSP's gapped (non-prelim): 122
length of query: 431
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 409
effective length of database: 17,147,199,772
effective search space: 7013204706748
effective search space used: 7013204706748
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)