Clone Name	bastl55g03
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	NUP42_YEAST (P49686) Nucleoporin NUP42 (Nuclear pore protein NUP42)	47	2e-05
2	FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)	45	8e-05
3	NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58	45	8e-05
4	PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM ...	44	1e-04
5	NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nu...	44	2e-04
6	NUP98_RAT (P49793) Nuclear pore complex protein Nup98 (Nucleopor...	44	2e-04
7	GLH4_CAEEL (O76743) ATP-dependent RNA helicase glh-4 (EC 3.6.1.-...	43	3e-04
8	NU100_YEAST (Q02629) Nucleoporin NUP100/NSP100 (Nuclear pore pro...	43	4e-04
9	NUPL_HUMAN (P52594) Nucleoporin-like protein RIP (HIV-1 Rev-bind...	42	5e-04
10	NUPL_BOVIN (Q2TA45) Nucleoporin-like protein RIP (HIV-1 Rev-bind...	42	5e-04
11	YAUF_SCHPO (Q10168) Hypothetical protein C26A3.15c in chromosome I	42	7e-04
12	NUP98_HUMAN (P52948) Nuclear pore complex protein Nup98-Nup96 pr...	42	7e-04
13	NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleo...	42	7e-04
14	NU189_SCHPO (Q9UTK4) Nucleoporin nup189 (Nuclear pore protein nu...	42	7e-04
15	PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 12...	41	0.001
16	FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncog...	41	0.002
17	NUP54_DROME (Q9V6B9) Probable nucleoporin Nup54	41	0.002
18	NUPL2_BRARE (Q6P0U9) Nucleoporin-like 2	40	0.002
19	MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)	39	0.007
20	NUPL_MOUSE (Q8K2K6) Nucleoporin-like protein RIP (HIV-1 Rev-bind...	37	0.017
21	NU116_YEAST (Q02630) Nucleoporin NUP116/NSP116 (Nuclear pore pro...	37	0.017
22	PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM ...	37	0.017
23	GAMP_PROCL (Q7M3P2) Gastrolith matrix protein (Fragment)	37	0.022
24	NUPL_RAT (Q4KLH5) Nucleoporin-like protein RIP (HIV-1 Rev-bindin...	37	0.022
25	AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor	37	0.022
26	GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-...	37	0.022
27	NSP1_YEAST (P14907) Nucleoporin NSP1 (Nuclear pore protein NSP1)...	37	0.028
28	FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)	36	0.037
29	NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleo...	35	0.063
30	NU153_HUMAN (P49790) Nuclear pore complex protein Nup153 (Nucleo...	35	0.063
31	NUPL1_HUMAN (Q9BVL2) Nucleoporin p58/p45 (Nucleoporin-like 1)	35	0.082
32	NU159_YEAST (P40477) Nucleoporin NUP159 (Nuclear pore protein NU...	35	0.082
33	NU145_YEAST (P49687) Nucleoporin NUP145 precursor (EC 3.4.21.-) ...	35	0.11
34	NUPL2_XENTR (Q5FVW4) Nucleoporin-like 2	35	0.11
35	TROP_HUMAN (Q12816) Trophinin (MAGE-D3 antigen)	34	0.14
36	NUPL2_XENLA (Q5XGN1) Nucleoporin-like 2	34	0.18
37	NUP54_HUMAN (Q7Z3B4) Nucleoporin p54 (54 kDa nucleoporin)	34	0.18
38	NUP49_YEAST (Q02199) Nucleoporin NUP49/NSP49 (Nuclear pore prote...	34	0.18
39	RGS6_CAEEL (Q18563) Regulator of G-protein signaling rgs-6	34	0.18
40	CU36_MANSE (Q8MUC5) Pupal cuticle protein 36 precursor (MsCP36) ...	34	0.18
41	YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein P...	33	0.24
42	NUPL1_RAT (P70581) Nucleoporin p58/p45 (Nucleoporin-like 1)	33	0.24
43	AMO1_SCHPO (O74315) Nucleoporin-like protein amo1 (Aberrent micr...	33	0.24
44	NUPL1_MOUSE (Q8R332) Nucleoporin p58/p45 (Nucleoporin-like 1)	33	0.24
45	NUP57_YEAST (P48837) Nucleoporin NUP57 (Nuclear pore protein NUP57)	33	0.31
46	HRBL_MOUSE (Q80WC7) HIV-1 Rev-binding protein-like protein (Rev/...	33	0.31
47	KCNAE_DROME (Q02280) Potassium voltage-gated channel protein eag...	33	0.31
48	DAN4_YEAST (P47179) Cell wall protein DAN4 precursor	33	0.41
49	CU36A_MANSE (Q8T634) Pupal cuticle protein 36a precursor (CP36a)	32	0.53
50	CDSN_MOUSE (Q7TPC1) Corneodesmosin precursor	32	0.70
51	VG50_ICHV1 (Q00130) Hypothetical gene 50 protein	32	0.70
52	PUM2_MOUSE (Q80U58) Pumilio homolog 2	32	0.70
53	HBA1_SCHPO (Q09146) Brefeldin A resistance protein (Caffeine res...	32	0.70
54	WSC2_YEAST (P53832) Cell wall integrity and stress response comp...	32	0.70
55	NUP54_RAT (P70582) Nucleoporin p54 (54 kDa nucleoporin)	32	0.70
56	NUP54_MOUSE (Q8BTS4) Nucleoporin p54 (54 kDa nucleoporin)	32	0.70
57	NU153_RAT (P49791) Nuclear pore complex protein Nup153 (Nucleopo...	32	0.91
58	EP15R_MOUSE (Q60902) Epidermal growth factor receptor substrate ...	31	1.2
59	YS89_CAEEL (Q09624) Hypothetical protein ZK945.9	31	1.2
60	NUPL2_PONPY (Q5RB98) Nucleoporin-like 2	31	1.2
61	NUPL2_HUMAN (O15504) Nucleoporin-like 2 (NLP-1) (hCG1) (NUP42 ho...	31	1.2
62	GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-...	31	1.2
63	K2CB_BOVIN (P04262) Keratin, type II cytoskeletal 68 kDa, compon...	31	1.2
64	VGLX_EHV1B (P28968) Glycoprotein X precursor	31	1.2
65	FBSH_MOUSE (Q8R089) Probable fibrosin-1 long transcript protein	31	1.6
66	TCNA_TRYCR (P23253) Sialidase (EC 3.2.1.18) (Neuraminidase) (NA)...	31	1.6
67	SEC9_DEBHA (Q6BKU3) Protein transport protein SEC9	31	1.6
68	VLPC_MYCHR (P29230) Variant surface antigen C precursor (VLPC pr...	31	1.6
69	FBSH_HUMAN (Q9HAH7) Probable fibrosin-1 long transcript protein	30	2.0
70	MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)	30	2.0
71	SP96_DICDI (P14328) Spore coat protein SP96	30	2.0
72	MSA2_PLAF1 (P50496) Merozoite surface antigen 2 precursor (MSA-2)	30	2.0
73	MCM3A_HUMAN (O60318) 80 kda MCM3-associated protein (GANP protein)	30	2.0
74	SSB_COREF (Q8FLP9) Single-stranded DNA-binding protein (SSB) (He...	30	2.0
75	YI94_SCHPO (Q9UT55) Protein C806.04c	30	2.0
76	ZN703_HUMAN (Q9H7S9) Zinc finger protein 703	30	2.7
77	GUN1_USTMA (P54424) Endoglucanase 1 precursor (EC 3.2.1.4) (Endo...	30	2.7
78	ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arab...	30	2.7
79	VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor	30	2.7
80	SMBT2_MOUSE (Q5DTW2) Scm-like with four MBT domains protein 2	30	2.7
81	EP15_HUMAN (P42566) Epidermal growth factor receptor substrate 1...	30	2.7
82	NG79_SCHPO (Q09793) Putative nucleoporin C22G7.09c	30	2.7
83	PRY1_YEAST (P47032) Protein PRY1 precursor (Pathogen related in ...	30	2.7
84	P53_MOUSE (P02340) Cellular tumor antigen p53 (Tumor suppressor ...	30	3.5
85	HRPA1_XANCV (P80151) Hypersensitivity response secretion protein...	30	3.5
86	BYN_DROME (P55965) T-related protein (Trp) (Protein brachyenteron)	30	3.5
87	API_ACHLY (P15636) Protease 1 precursor (EC 3.4.21.50) (Protease...	30	3.5
88	NUP62_HUMAN (P37198) Nuclear pore glycoprotein p62 (62 kDa nucle...	30	3.5
89	FLGH_PSEPU (Q52081) Flagellar L-ring protein precursor (Basal bo...	30	3.5
90	MUC13_RAT (P97881) Mucin-13 precursor	30	3.5
91	PUM2_HUMAN (Q8TB72) Pumilio homolog 2 (Pumilio-2)	29	4.5
92	NUP1_YEAST (P20676) Nucleoporin NUP1 (Nuclear pore protein NUP1)	29	4.5
93	HMB1_STRPU (P13545) Homeobox protein HB1 (SPHBOX1)	29	4.5
94	HRBL_HUMAN (O95081) HIV-1 Rev-binding protein-like protein (Rev/...	29	4.5
95	FLGH_PSEPK (Q88ER9) Flagellar L-ring protein precursor (Basal bo...	29	4.5
96	WSC4_YEAST (P38739) Cell wall integrity and stress response comp...	29	4.5
97	K2C6C_HUMAN (P48666) Keratin, type II cytoskeletal 6C (Cytokerat...	29	4.5
98	EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 1...	29	4.5
99	EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate ...	29	5.9
100	PYRD_HALMA (Q5UYF1) Dihydroorotate dehydrogenase (EC 1.3.3.1) (D...	29	5.9
101	MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronc...	29	5.9
102	EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi	29	5.9
103	PUM1_HUMAN (Q14671) Pumilio homolog 1 (Pumilio-1) (HsPUM)	29	5.9
104	PHXR5_MOUSE (P08399) Per-hexamer repeat protein 5	29	5.9
105	CYSP4_DICDI (P54639) Cysteine proteinase 4 precursor (EC 3.4.22.-)	29	5.9
106	P53_MACMU (P56424) Cellular tumor antigen p53 (Tumor suppressor ...	28	7.7
107	P53_MACFU (P61260) Cellular tumor antigen p53 (Tumor suppressor ...	28	7.7
108	P53_MACFA (P56423) Cellular tumor antigen p53 (Tumor suppressor ...	28	7.7
109	P53_CERAE (P13481) Cellular tumor antigen p53 (Tumor suppressor ...	28	7.7
110	DPOL_ASFL6 (P43139) DNA polymerase (EC 2.7.7.7)	28	7.7
111	SSB_BACAN (Q81JI3) Single-stranded DNA-binding protein (SSB) (He...	28	7.7
112	DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (...	28	7.7
113	MUCSM_CANFA (P83762) Submaxillary mucin (CSM) (Fragment)	28	7.7
114	K1C3_XENLA (P05782) Keratin, type I cytoskeletal 47 kDa (Fragment)	28	7.7
115	ILF3_MOUSE (Q9Z1X4) Interleukin enhancer-binding factor 3	28	7.7
116	PUM1_MOUSE (Q80U78) Pumilio homolog 1	28	7.7
117	P2RX1_MOUSE (P51576) P2X purinoceptor 1 (ATP receptor) (P2X1) (P...	28	7.7
118	KAPR_TRIAT (Q86ZN7) cAMP-dependent protein kinase regulatory sub...	28	7.7
119	CPO_DROME (Q01617) Protein couch potato	28	7.7
120	MUCS_BOVIN (P98091) Submaxillary mucin-like protein	28	7.7

---

>NUP42_YEAST (P49686) Nucleoporin NUP42 (Nuclear pore protein NUP42)|
          Length = 430

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSS----NPFGAQSGFGQTS-------TATNPFGSPT---TAFGA 266
           +T   G +S SAFG TS+    + FGA + FG ++       + T+ FG+P+   T FGA
Sbjct: 68  NTGNTGNTSISAFGNTSNAAKPSAFGAPA-FGSSAPINVNPPSTTSAFGAPSFGSTGFGA 126

Query: 267 QTGTTSPFGATSSTAG-AFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
              T++PFG +  + G AFGQP+                       +  AFG  S++P
Sbjct: 127 MAATSNPFGKSPGSMGSAFGQPA-------FGANKTAIPSSSVSNSNNSAFGAASNTP 177



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
 Frame = +3

Query: 150 SSASAFGQTSSNPFGAQSGFGQ--------TSTATNPFGSPTTAFGAQTGTTSPFGATSS 305
           S+ SAFG  S+ P    S FG          S+ ++ FG PT  FGA T T SPFG   +
Sbjct: 165 SNNSAFGAASNTPLTTTSPFGSLQQNASQNASSTSSAFGKPT--FGAATNTQSPFGTIQN 222

Query: 306 TAGAFGQPSAP 338
           T+ + G   +P
Sbjct: 223 TSTSSGTGVSP 233



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 15/86 (17%)
 Frame = +3

Query: 120 MFGSTNPFGQ---SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG----T 278
           M  ++NPFG+   S  SAFGQ +   FGA      +S+ +N   S  +AFGA +     T
Sbjct: 127 MAATSNPFGKSPGSMGSAFGQPA---FGANKTAIPSSSVSN---SNNSAFGAASNTPLTT 180

Query: 279 TSPFGA--------TSSTAGAFGQPS 332
           TSPFG+         SST+ AFG+P+
Sbjct: 181 TSPFGSLQQNASQNASSTSSAFGKPT 206



 Score = 38.5 bits (88), Expect = 0.007
 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 15/82 (18%)
 Frame = +3

Query: 129 STNPFG--QSSASAFGQTSSNPFGAQSGFGQTSTATNPFG-------------SPTTAFG 263
           +T+PFG  Q +AS    ++S+ FG  + FG  +   +PFG             SP   FG
Sbjct: 180 TTSPFGSLQQNASQNASSTSSAFGKPT-FGAATNTQSPFGTIQNTSTSSGTGVSPFGTFG 238

Query: 264 AQTGTTSPFGATSSTAGAFGQP 329
             +   SPF    S AGA   P
Sbjct: 239 TNSNNKSPFSNLQSGAGAGSSP 260

---

>FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)|
          Length = 518

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQT-----GTTSPFG 293
           S+ P+GQ S S +GQ++       SG+GQ+S  ++   +  T +G Q+     G+T  +G
Sbjct: 29  SSQPYGQQSYSGYGQSADT-----SGYGQSSYGSSYGQTQNTGYGTQSAPQGYGSTGGYG 83

Query: 294 ATSSTAGAFGQPSA-PXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSPFG 443
           ++ S+  ++GQ S+ P                   Q S  ++G P S  +G
Sbjct: 84  SSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGGSSQSS--SYGQPQSGGYG 132



 Score = 31.2 bits (69), Expect = 1.2
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = +3

Query: 144 GQSSASAFGQTSSNPFGAQSGFG---QTSTATNPFGSPTTAFGAQTG-TTSPFGATSSTA 311
           G S +S++GQ  S  +G QSG+G   Q+        +P   +G Q    +S  G      
Sbjct: 116 GSSQSSSYGQPQSGGYGQQSGYGGQQQSYGQQQSSYNPPQGYGQQNQYNSSSGGGGGGGG 175

Query: 312 GAFGQ 326
           G +GQ
Sbjct: 176 GNYGQ 180

---

>NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58|
          Length = 546

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
 Frame = +3

Query: 129 STNPFGQSSAS-AFGQTSSNP-FGAQSGFGQTSTATNPFGSP--TTAFGAQTGTTSPFGA 296
           +T+ FG  +A+ AFG  ++ P FGA +       AT  FG+P  T+AFGA   TT+ FGA
Sbjct: 106 ATSAFGAPAATPAFGAAAATPAFGAPA-------ATPAFGAPAATSAFGAPAATTA-FGA 157

Query: 297 TSST-AGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFG 419
            +ST A AFG P AP                     + PAFG
Sbjct: 158 PASTQASAFGAP-APAVGTVAPTFSFATPATSAPTTAPPAFG 198



 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 42/110 (38%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
 Frame = +3

Query: 129 STNPFGQSSAS-AFGQTSSNP-FGAQS----GFGQTSTATNPFGSP--TTAFGAQTGTTS 284
           +T  FG  +A+ AFG  +S P FGA S     FG T+ AT  FG P  T+AFGA   T +
Sbjct: 60  ATPAFGAPAATPAFGAPASTPGFGATSTAAPAFG-TAAATPAFGIPAATSAFGAPAATPA 118

Query: 285 PFGATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
            FGA ++T  AFG P+A                      +T AFG P+S+
Sbjct: 119 -FGAAAATP-AFGAPAA-----TPAFGAPAATSAFGAPAATTAFGAPAST 161



 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNP-FGAQ---SGFGQTSTATNPFGSP--TTAFGAQTGTTS 284
           FG+      +   +FG  +S P FGA    +       AT  FG+P  T AFGA   T  
Sbjct: 22  FGARPATTTAPPPSFGAATSTPTFGAAPATTSLFAAPAATPAFGAPAATPAFGAPASTPG 81

Query: 285 PFGATSSTAGAFGQPSAPXX----XXXXXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
            FGATS+ A AFG  +A                          +TPAFG P+++P
Sbjct: 82  -FGATSTAAPAFGTAAATPAFGIPAATSAFGAPAATPAFGAAAATPAFGAPAATP 135



 Score = 38.1 bits (87), Expect = 0.010
 Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNP-FGSPTTA--FGAQTGTTSPFGAT 299
           + N  G ++A+    T +  FGA+     T+TA  P FG+ T+   FGA   TTS F A 
Sbjct: 6   TNNAIGGATAA----TGAFAFGARPA---TTTAPPPSFGAATSTPTFGAAPATTSLFAAP 58

Query: 300 SSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
           ++T  AFG P+A                       TPAFG P+S+P
Sbjct: 59  AATP-AFGAPAA-----------------------TPAFGAPASTP 80



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
 Frame = +3

Query: 129 STNPFGQSSAS-AFG---QTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 296
           +T+ FG  +A+ AFG    T ++ FGA +    T   T  F +P T+          FG 
Sbjct: 142 ATSAFGAPAATTAFGAPASTQASAFGAPAPAVGTVAPTFSFATPATSAPTTAPPAFGFGT 201

Query: 297 TSSTAGA 317
           T++TA A
Sbjct: 202 TATTAAA 208

---

>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore|
            membrane protein of 121 kDa)
          Length = 1200

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 3/110 (2%)
 Frame = +3

Query: 123  FGSTNPFGQSSASA-FGQTSSNPFG--AQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFG 293
            FGS+  FG S ASA     +   FG  AQ  FG    A + FG+P +   A   TTS F 
Sbjct: 952  FGSSFTFGNSVASAPSAAPAPATFGSAAQPAFGGLKAAASTFGAPASTQPAFGSTTSVFS 1011

Query: 294  ATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSPFG 443
              S+T   FG  +                      PS   FG  S++P G
Sbjct: 1012 FGSATTSGFGAAATAATTTQTTNSGSSSSLFGSSAPSPFTFG-GSAAPAG 1060



 Score = 33.1 bits (74), Expect = 0.31
 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 129  STNPFGQSS-ASAFGQTSSN-PFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 287
            ST  FGQS+ A   G T S+  FGA S   Q      PFGS   +F    G+ +P
Sbjct: 1130 STPTFGQSAPAPGVGTTGSSLSFGASSTPAQGFVGVGPFGSAAPSFSIGAGSKTP 1184



 Score = 33.1 bits (74), Expect = 0.31
 Identities = 36/139 (25%), Positives = 51/139 (36%), Gaps = 32/139 (23%)
 Frame = +3

Query: 123  FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQT-------GTT 281
            FGST     +S  +FG  +++ FGA +    T+  TN  GS ++ FG+         G+ 
Sbjct: 1003 FGST-----TSVFSFGSATTSGFGAAATAATTTQTTNS-GSSSSLFGSSAPSPFTFGGSA 1056

Query: 282  SPFGA----------TSSTAGAF----GQPSAPXXXXXXXXXXX-----------XXXXX 386
            +P G+          TSST+G F    GQ   P                           
Sbjct: 1057 APAGSGGFGLSATPGTSSTSGTFSFGSGQSGTPGTTTSFGSLSQNTLGAPSQGSPFAFSV 1116

Query: 387  XXXQPSTPAFGTPSSSPFG 443
                 S P FG  S+  FG
Sbjct: 1117 GSTPESKPVFGGTSTPTFG 1135

---

>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)|
          Length = 1159

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 37/105 (35%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
 Frame = +3

Query: 120  MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQ-TSTATNPFGSPTTAFGAQTGTTSPFGA 296
            MFG++ P   SSA AFG  S     A +GFG  T+TATN    P+T F     T +P  A
Sbjct: 1011 MFGTSTP-APSSAFAFGNQSGTNPAAPAGFGGITNTATN--NPPSTGF-----TFTPSNA 1062

Query: 297  TSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSS 431
             S+ A  FG  + P                   +PS PA   PS+
Sbjct: 1063 GSTAAPMFGAGNTP-NPSGSINNASQAFAFGSGEPSNPASNPPST 1106



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 29/126 (23%), Positives = 42/126 (33%), Gaps = 24/126 (19%)
 Frame = +3

Query: 129  STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFG-----------SPTTAFGAQTG 275
            +T P   +S+   G T++ PF   S F     +TN              SP  +FG  +G
Sbjct: 847  TTKPQLDTSSKTDGVTANAPFSFASAFNAPKPSTNTADGKDSASNLTTPSPAFSFGNNSG 906

Query: 276  -------------TTSPFGATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAF 416
                         +T+PF   +S   AF   SA                      S  +F
Sbjct: 907  VKASSNNNPSTNSSTAPFSFGTSNKPAFSFGSATSKTTSEGTAPAASASAPAPTTSAFSF 966

Query: 417  GTPSSS 434
            G  +SS
Sbjct: 967  GASNSS 972

---

>NUP98_RAT (P49793) Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98|
           kDa nucleoporin)
          Length = 937

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 27/67 (40%), Positives = 36/67 (53%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 302
           FG+T+ FGQ++   FG TS   FG  S FG +S     FG+  T  G   GT+S     +
Sbjct: 16  FGTTSTFGQNTG--FGTTSGGAFGT-SAFGSSSNTGGLFGNSQTKPGGLFGTSSLSQPAT 72

Query: 303 STAGAFG 323
           ST+  FG
Sbjct: 73  STSTGFG 79



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 24/53 (45%), Positives = 30/53 (56%)
 Frame = +3

Query: 165 FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 323
           F ++   PFG   GFG TST     G  TT+ GA    TS FG++S+T G FG
Sbjct: 2   FNKSFGTPFGGTGGFGTTSTFGQNTGFGTTSGGA--FGTSAFGSSSNTGGLFG 52



 Score = 36.2 bits (82), Expect = 0.037
 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 16/86 (18%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFG----QTSSNPFGAQSGFGQTSTAT------NPFGSPTTAFGAQT 272
           FG+T+  GQ S +  G      +S P G       TST T        FG P T FGA  
Sbjct: 301 FGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQPNTGFGAVG 360

Query: 273 GT------TSPFGATSSTAGAFGQPS 332
            T       + FG ++++A +FG  S
Sbjct: 361 STLFGNNKLTTFGTSTTSAPSFGTTS 386



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 18/82 (21%)
 Frame = +3

Query: 141 FGQSSASAFGQTSSNPFG-------AQSGFGQTSTATNPFGSPTTAF-----------GA 266
           FG SS S    ++S  FG       + S FG  +T T+ F S   AF           G 
Sbjct: 62  FGTSSLSQPATSTSTGFGFGTSTGTSNSLFGTANTGTSLFSSQNNAFAQNKPTGFGNFGT 121

Query: 267 QTGTTSPFGATSSTAGAFGQPS 332
            T +   FG T++T+  FG  S
Sbjct: 122 STSSGGLFGTTNTTSNPFGNTS 143



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 19/87 (21%)
 Frame = +3

Query: 120 MFGSTN--PFGQSSASA--FGQTSSNPFG-------------AQSGFGQTSTATNPFGSP 248
           +FG+     FG S+ SA  FG TS   FG             +  GFG  ++ ++ FGS 
Sbjct: 363 LFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNNSGSSIFGSK 422

Query: 249 TTAFGAQTGTTSPFGAT--SSTAGAFG 323
             A    TG  + FG    +  A  FG
Sbjct: 423 PAAGTLGTGLGTGFGTALGAGQASLFG 449

---

>GLH4_CAEEL (O76743) ATP-dependent RNA helicase glh-4 (EC 3.6.1.-) (Germline|
           helicase 4)
          Length = 1156

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQ-------SGF--GQTSTATNPFGSPTTAFGAQTGTT 281
           S++ FG  S + FG TSS+  G Q       SGF   +TST+   FGS    FG +  T+
Sbjct: 334 SSSSFGSGSKAGFGGTSSSGIGGQKPGATESSGFPTKETSTSGGTFGS---GFGGKP-TS 389

Query: 282 SPFGATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSPFG 443
           + FGA S+T  + GQ +A                      S P FG  SS+ FG
Sbjct: 390 TGFGAPSTTDSSSGQQTAGFGGA-----------------SKPGFGGDSSTGFG 426



 Score = 41.6 bits (96), Expect = 9e-04
 Identities = 39/110 (35%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
 Frame = +3

Query: 132 TNPFGQSSASAFGQTSSNPFGA--QSGFG--QTSTATNPFGSPT--TAFGAQTGTTSPFG 293
           T  FG +S   FG  SS  FG+  ++GFG  + STA N  G PT  T FG +      FG
Sbjct: 406 TAGFGGASKPGFGGDSSTGFGSGLKAGFGGHRASTAENS-GLPTETTGFGGKLPPAG-FG 463

Query: 294 ATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSPFG 443
           A+SS   AFGQ S                     + S   FG P    FG
Sbjct: 464 ASSSNESAFGQQSKGFGGATKNGFGGDSSNSFGKRDS--GFGGPQDQGFG 511



 Score = 35.4 bits (80), Expect = 0.063
 Identities = 23/64 (35%), Positives = 31/64 (48%)
 Frame = +3

Query: 141 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 320
           FG  S++ FG      FG   G G  +   +   + TT FG +  +   FGA+SS   AF
Sbjct: 260 FGGDSSTGFGSGLKAGFG---GHGAGAAENSGLPTETTGFGGKLPSAG-FGASSSNESAF 315

Query: 321 GQPS 332
           GQ S
Sbjct: 316 GQQS 319



 Score = 32.3 bits (72), Expect = 0.53
 Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 141 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP-FGATSSTAGA 317
           FG ++   FG +SS+ FG     GQ + AT   G PT     +T T+ P FG  SST   
Sbjct: 219 FGGAAKMGFGGSSSSGFG-----GQKAGATESSGFPT----KETSTSQPGFGGDSSTGFG 269

Query: 318 FG 323
            G
Sbjct: 270 SG 271



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 30/135 (22%), Positives = 48/135 (35%), Gaps = 33/135 (24%)
 Frame = +3

Query: 129 STNPFGQSSASAFG------------QTSSNPFGAQ---SGFGQTSTATNPFGSPTTAFG 263
           S+  FG    + FG             T +  FG +   +GFG +S+  + FG  +  FG
Sbjct: 264 SSTGFGSGLKAGFGGHGAGAAENSGLPTETTGFGGKLPSAGFGASSSNESAFGQQSKGFG 323

Query: 264 AQT--------------GTTSPFGATSSTAGAFGQPSAPXX----XXXXXXXXXXXXXXX 389
             T              G+ + FG TSS+     +P A                      
Sbjct: 324 GATKNGFGGDSSSSFGSGSKAGFGGTSSSGIGGQKPGATESSGFPTKETSTSGGTFGSGF 383

Query: 390 XXQPSTPAFGTPSSS 434
             +P++  FG PS++
Sbjct: 384 GGKPTSTGFGAPSTT 398

---

>NU100_YEAST (Q02629) Nucleoporin NUP100/NSP100 (Nuclear pore protein|
           NUP100/NSP100)
          Length = 959

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 41/123 (33%), Positives = 51/123 (41%), Gaps = 16/123 (13%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSS-NPFG--AQSGFGQTSTATN-PFG-----SPTTAFGAQ-- 269
           FGS N    S+ + FG +SS   FG    + F   S +TN PFG     +  T FG+Q  
Sbjct: 91  FGSLNSSNASNGNTFGGSSSMGSFGGNTNNAFNNNSNSTNSPFGFNKPNTGGTLFGSQNN 150

Query: 270 --TGTTSPFGATS-STAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPA--FGTPSSS 434
              GT+S FG  S ST G FG   +                    Q +T    FG   SS
Sbjct: 151 NSAGTSSLFGGQSTSTTGTFGNTGSSFGTGLNGNGSNIFGAGNNSQSNTTGSLFGNQQSS 210

Query: 435 PFG 443
            FG
Sbjct: 211 AFG 213



 Score = 33.9 bits (76), Expect = 0.18
 Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 34/102 (33%)
 Frame = +3

Query: 120 MFGSTNP--------FGQSSASAFGQTSSNP---FG------------AQSGFGQTSTAT 230
           MFG+  P        FG +++S  GQ S  P   FG            AQSGFG  ++A 
Sbjct: 1   MFGNNRPMFGGSNLSFGSNTSSFGGQQSQQPNSLFGNSNNNNNSTSNNAQSGFGGFTSAA 60

Query: 231 NP-----FGSPTT----AFGAQTGTT--SPFGATSSTAGAFG 323
                  FG+  T    AFG   G T  SPFG+ +S+  + G
Sbjct: 61  GSNSNSLFGNNNTQNNGAFGQSMGATQNSPFGSLNSSNASNG 102



 Score = 32.7 bits (73), Expect = 0.41
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
 Frame = +3

Query: 129 STNP-FGQSSASAFGQTSSNPFGAQSG-----------FGQTSTATNPFGSPTTAFGAQT 272
           STN  FG ++ ++   T++  FGA+             FG +++ ++  G     FG  T
Sbjct: 487 STNGLFGNNANNSTSTTNTGLFGAKPDSQSKPALGGGLFGNSNSNSSTIGQNKPVFGGTT 546

Query: 273 GTTSPFGATSSTAGAFG 323
             T  FGAT + + A G
Sbjct: 547 QNTGLFGATGTNSSAVG 563



 Score = 32.7 bits (73), Expect = 0.41
 Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 12/80 (15%)
 Frame = +3

Query: 120 MFGSTN-----PFGQSSASAFGQTS-------SNPFGAQSGFGQTSTATNPFGSPTTAFG 263
           +FG+TN        Q   S FG T         NP   QSG G +   T P  +  + FG
Sbjct: 418 LFGTTNVPTSNTQSQQGNSLFGATKLTNMPFGGNPTANQSGSGNSLFGTKPASTTGSLFG 477

Query: 264 AQTGTTSPFGATSSTAGAFG 323
             T +T+      ST G FG
Sbjct: 478 NNTASTT----VPSTNGLFG 493



 Score = 32.3 bits (72), Expect = 0.53
 Identities = 26/70 (37%), Positives = 33/70 (47%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 302
           FG+ N  G SS   FG   S P G+ S FGQ++   N  G+ T       G  +     S
Sbjct: 233 FGNQNQLGGSS---FG---SKPVGSGSLFGQSN---NTLGNTTNNRNGLFGQMNSSNQGS 283

Query: 303 STAGAFGQPS 332
           S +G FGQ S
Sbjct: 284 SNSGLFGQNS 293



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGS-PTTAFGAQTGTTSPFGAT 299
           FG+T   G S  +      SN FGA +   Q++T  + FG+  ++AFG      S FG  
Sbjct: 170 FGNT---GSSFGTGLNGNGSNIFGAGNN-SQSNTTGSLFGNQQSSAFGTNNQQGSLFGQQ 225

Query: 300 S-STAGAFG 323
           S +T  AFG
Sbjct: 226 SQNTNNAFG 234

---

>NUPL_HUMAN (P52594) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)|
           (Rev-interacting protein) (Rev/Rex activation
           domain-binding protein)
          Length = 562

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 21/120 (17%)
 Frame = +3

Query: 42  AAVDPILXXXXXXXXXXXXXXXXXXXMFGS--------TNPFGQSSASAFGQT-SSNPFG 194
           A +D +                    +FG+        T P   S  + FG T S+NPF 
Sbjct: 378 AELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPASSSVPAPFGATPSTNPFV 437

Query: 195 AQSGFGQTSTATNPF-----GSPTTAFGAQT-------GTTSPFGATSSTAGAFGQPSAP 338
           A +G    +++TNPF     G+    FG  +       GT +P+   +S +G+F QP+ P
Sbjct: 438 AAAG-PSVASSTNPFQTNARGATAATFGTASMSMPTGFGTPAPYSLPTSFSGSFQQPAFP 496



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 7/46 (15%)
 Frame = +3

Query: 123 FGSTNP----FGQSSASAFGQTSSNPF--GAQSG-FGQTSTATNPF 239
           FG T P    FGQ +A+     SSNPF  GA +G F   S++TNPF
Sbjct: 519 FGQTKPVVTPFGQVAAAG---VSSNPFMTGAPTGQFPTGSSSTNPF 561



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNP-FGAQSGFGQ-TSTATNPFGSPTTAFGAQTGTTSPFGA 296
           FG+  P+  S  ++F  +   P F AQ+ F Q T+ +  P G+   AFG      +PFG 
Sbjct: 474 FGTPAPY--SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPVVTPFGQ 531

Query: 297 TSSTAGAFGQP 329
            ++ AG    P
Sbjct: 532 VAA-AGVSSNP 541

---

>NUPL_BOVIN (Q2TA45) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein|
           homolog)
          Length = 562

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 21/120 (17%)
 Frame = +3

Query: 42  AAVDPILXXXXXXXXXXXXXXXXXXXMFGS--------TNPFGQSSASAFGQT-SSNPFG 194
           A +D +                    +FG+        T P   S  + FG T S+NPF 
Sbjct: 378 AELDSVFSSAATSSNAYTSTSNASSNVFGTVPVGASAQTQPASSSVPAPFGATPSTNPFV 437

Query: 195 AQSGFGQTSTATNPF-----GSPTTAFGAQT-------GTTSPFGATSSTAGAFGQPSAP 338
           A +G    +++TNPF     G+    FG  +       GT +P+   +S +G+F QP+ P
Sbjct: 438 AAAG-PSVASSTNPFQTNARGATAATFGTASMSMPAGFGTPAPYSLPTSFSGSFQQPAFP 496



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 25/90 (27%), Positives = 33/90 (36%), Gaps = 5/90 (5%)
 Frame = +3

Query: 174 TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST----AGAFGQPSAPX 341
           TSSN + + S        T P G+      A +   +PFGAT ST    A A    ++  
Sbjct: 389 TSSNAYTSTSNASSNVFGTVPVGASAQTQPASSSVPAPFGATPSTNPFVAAAGPSVASST 448

Query: 342 XXXXXXXXXXXXXXXXXXQPSTPA-FGTPS 428
                               S PA FGTP+
Sbjct: 449 NPFQTNARGATAATFGTASMSMPAGFGTPA 478



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNP-FGAQSGFGQ-TSTATNPFGSPTTAFGAQTGTTSPFGA 296
           FG+  P+  S  ++F  +   P F AQ+ F Q T+ +  P G+   AFG      +PFG 
Sbjct: 474 FGTPAPY--SLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPVVTPFG- 530

Query: 297 TSSTAGAFGQPSAP 338
                GA G  S P
Sbjct: 531 ---QVGAAGVSSNP 541



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
 Frame = +3

Query: 123 FGSTNP----FGQSSASAFGQTSSNPF--GAQSG-FGQTSTATNPF 239
           FG T P    FGQ  A+     SSNPF  GA +G F   S++TNPF
Sbjct: 519 FGQTKPVVTPFGQVGAAG---VSSNPFMTGAPTGQFPTGSSSTNPF 561

---

>YAUF_SCHPO (Q10168) Hypothetical protein C26A3.15c in chromosome I|
          Length = 598

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
 Frame = +3

Query: 126 GSTNPFGQSS----ASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFG 293
           GS N  G  S    +SA G  ++NP G+   FG ++ + N FG P +     T TT+P  
Sbjct: 112 GSANSTGDKSKNTASSATGAATTNPSGSTFNFGSSNNSFN-FGKPAST----TNTTTP-- 164

Query: 294 ATSSTAGAFGQPSA 335
           A +ST   FG+P+A
Sbjct: 165 AAASTGSLFGKPAA 178



 Score = 30.4 bits (67), Expect = 2.0
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 11/114 (9%)
 Frame = +3

Query: 126 GSTNPFGQSSASAFGQTSSN-PFGAQ---SGFGQTSTATNPFGSPTTAFGAQTG--TTSP 287
           G++     SS  +FG T++N   GA+    G G T +A +          + TG  TT+P
Sbjct: 77  GNSTNASTSSPFSFGSTNTNNTAGAKPLFGGLGSTGSANSTGDKSKNTASSATGAATTNP 136

Query: 288 FGAT-----SSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
            G+T     S+ +  FG+P++                       T +   P+SS
Sbjct: 137 SGSTFNFGSSNNSFNFGKPASTTNTTTPAAASTGSLFGKPAATGTTSNAPPASS 190



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQ-----TSSN--PFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 287
           +T P   S+ S FG+     T+SN  P  + S    T +    FG P +       +TS 
Sbjct: 161 TTTPAAASTGSLFGKPAATGTTSNAPPASSTSTTPATGSGGFSFGKPASLGSTNNASTS- 219

Query: 288 FGATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
              T+++  +FG+P A                      S PA     S+P
Sbjct: 220 --TTANSGFSFGKP-ATTSAPGSNTTVTPSSSITGTNDSKPAASNTGSAP 266

---

>NUP98_HUMAN (P52948) Nuclear pore complex protein Nup98-Nup96 precursor|
           [Contains: Nuclear pore complex protein Nup98
           (Nucleoporin Nup98) (98 kDa nucleoporin); Nuclear pore
           complex protein Nup96 (Nucleoporin Nup96) (96 kDa
           nucleoporin)]
          Length = 1729

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 26/67 (38%), Positives = 36/67 (53%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 302
           FG+T+ FGQ++   FG TS   FG  S FG ++     FG+  T  G   GT+S     +
Sbjct: 17  FGTTSTFGQNTG--FGTTSGGAFGT-SAFGSSNNTGGLFGNSQTKPGGLFGTSSFSQPAT 73

Query: 303 STAGAFG 323
           ST+  FG
Sbjct: 74  STSTGFG 80



 Score = 37.4 bits (85), Expect = 0.017
 Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
 Frame = +3

Query: 135 NPFGQSSASAFGQ--TSSNPFGAQSGFGQTSTATNPFGSPT-TAFGAQTGTTSPFGAT 299
           N F Q+  + FG   TS++  G    FG T+T +NPFGS + + FG  + T +P G T
Sbjct: 107 NAFAQNKPTGFGNFGTSTSSGGL---FGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTT 161



 Score = 36.6 bits (83), Expect = 0.028
 Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 23/94 (24%)
 Frame = +3

Query: 120 MFGS--TNPFGQSSASAFGQTSSNP-----FGAQSG-----FGQTSTATNPFGSPTTAF- 260
           +FG+  T P G    S+F Q +++      FG  +G     FG  ST T+ F S   AF 
Sbjct: 51  LFGNSQTKPGGLFGTSSFSQPATSTSTGFGFGTSTGTANTLFGTASTGTSLFSSQNNAFA 110

Query: 261 ----------GAQTGTTSPFGATSSTAGAFGQPS 332
                     G  T +   FG T++T+  FG  S
Sbjct: 111 QNKPTGFGNFGTSTSSGGLFGTTNTTSNPFGSTS 144



 Score = 36.6 bits (83), Expect = 0.028
 Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +3

Query: 165 FGQTSSNPFGAQSG-FGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 323
           F ++   PFG  +G FG TST     G  TT+ GA    TS FG++++T G FG
Sbjct: 2   FNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGA--FGTSAFGSSNNTGGLFG 53



 Score = 36.2 bits (82), Expect = 0.037
 Identities = 32/110 (29%), Positives = 42/110 (38%), Gaps = 3/110 (2%)
 Frame = +3

Query: 123 FGSTNPFGQSSASA---FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFG 293
           FG+T+  GQ S +    FG T ++  G   G    ++    FG+ T  FG    T + FG
Sbjct: 302 FGNTSTIGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQ---TNTGFG 358

Query: 294 ATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSPFG 443
           A  ST   FG                          S P+FGT S   FG
Sbjct: 359 AVGST--LFGNNKLTTFGSSTT--------------SAPSFGTTSGGLFG 392

---

>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (CAN protein)
          Length = 2090

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 47/158 (29%), Positives = 56/158 (35%), Gaps = 51/158 (32%)
 Frame = +3

Query: 123  FGST------NPFGQSSASAFGQTSSNPFG---------------AQSGFGQTST----- 224
            FGST      N FG S A  FG  +S+ FG               A  GFG +S      
Sbjct: 1910 FGSTATSNTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSSGGGSVASQGFGFSSPNKTGG 1969

Query: 225  --ATNPFGSPTT-----------AFGAQTGTTSPFGAT----------SSTAGAFGQPSA 335
              A   FGSP T           AFG+    TSP G+T          +++AG FG  S+
Sbjct: 1970 FGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSS 2029

Query: 336  PXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSS--SPFG 443
                                   T  FGT SS  S FG
Sbjct: 2030 SNTTSFGTLASQNAPTFGSLSQQTSGFGTQSSGFSGFG 2067



 Score = 39.7 bits (91), Expect = 0.003
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 21/93 (22%)
 Frame = +3

Query: 123  FGSTNP--FGQSS---ASAFGQTSSNP----------FGAQSGFGQTSTATNPFGSPTTA 257
            FG+T P  FGQ++   AS FGQ++S+           F +   FGQ +++T P  +  + 
Sbjct: 1713 FGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQPASST-PTSTSGSV 1771

Query: 258  FGAQTGTTS----PFGATSSTAGA--FGQPSAP 338
            FGA + T+S     FG +S   G   FGQ +AP
Sbjct: 1772 FGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAP 1804



 Score = 38.9 bits (89), Expect = 0.006
 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 17/86 (19%)
 Frame = +3

Query: 129  STNPFGQSSASA----FGQTSSNPFGAQSGFGQ------------TSTATNPFGSPTTAF 260
            S+  FGQSS +     FGQ+++  FG   GFGQ            T+ AT+ F     + 
Sbjct: 1782 SSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQASG 1841

Query: 261  GAQTGTTSPFGATSSTAG-AFGQPSA 335
               + T S FG  +ST G  FGQ S+
Sbjct: 1842 FGSSNTGSVFGQAASTGGIVFGQQSS 1867



 Score = 38.1 bits (87), Expect = 0.010
 Identities = 38/126 (30%), Positives = 48/126 (38%), Gaps = 27/126 (21%)
 Frame = +3

Query: 138  PFGQSSASAFGQTSSNPFGAQSG---FGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 308
            P   SS+SAF Q ++N   A S    FGQ + +T P     + FG QTG+T+      ST
Sbjct: 1648 PPAASSSSAFNQLTNNTATAPSATPVFGQVAASTAP-----SLFGQQTGSTA------ST 1696

Query: 309  A---------------------GAFGQPSAPXXXXXXXXXXXXXXXXXXXQP---STPAF 416
            A                     G FGQ +                     QP   S PAF
Sbjct: 1697 AAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAF 1756

Query: 417  GTPSSS 434
            G P+SS
Sbjct: 1757 GQPASS 1762



 Score = 32.0 bits (71), Expect = 0.70
 Identities = 25/68 (36%), Positives = 31/68 (45%)
 Frame = +3

Query: 123  FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 302
            F S   FGQ ++S    TS + FGA S    +S+ +    SP T  G        FG   
Sbjct: 1750 FSSVPAFGQPASSTPTSTSGSVFGAASSTSSSSSFSFGQSSPNTGGGL-------FG--Q 1800

Query: 303  STAGAFGQ 326
            S A AFGQ
Sbjct: 1801 SNAPAFGQ 1808



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
 Frame = +3

Query: 141  FGQSS-ASAFGQTSSN---PFGA----QSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 296
            FG SS  ++FG  +S     FG+     SGFG  S+  + FGS T  F         FG+
Sbjct: 2026 FGSSSNTTSFGTLASQNAPTFGSLSQQTSGFGTQSSGFSGFGSGTGGFS--------FGS 2077

Query: 297  TSSTAGAFG 323
             +S+   FG
Sbjct: 2078 NNSSVQGFG 2086

---

>NU189_SCHPO (Q9UTK4) Nucleoporin nup189 (Nuclear pore protein nup189)|
          Length = 1778

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
 Frame = +3

Query: 120 MFGSTNPFGQSSASAFGQTSSNPFGAQSG---FGQTSTATNP-----FGSPTTAFGAQTG 275
           +FG+ N    +  + FG +S      QS    FG T+ ATNP     FGS T    A TG
Sbjct: 67  LFGNRNNTTTTGGTGFGMSSGTGMFGQSNTPAFGGTNNATNPSGGGLFGSNTANNNANTG 126

Query: 276 TTSPFGATSSTAG 314
           T+  FG+ + + G
Sbjct: 127 TSFSFGSNAGSTG 139



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +3

Query: 120 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT-AFGAQTGTTSPFGA 296
           M   T  FGQS+  AFG T++    +  G   ++TA N   + T+ +FG+  G+T  FG+
Sbjct: 84  MSSGTGMFGQSNTPAFGGTNNATNPSGGGLFGSNTANNNANTGTSFSFGSNAGSTG-FGS 142

Query: 297 TSSTAGAFGQPSAP 338
             +  G FG  + P
Sbjct: 143 QGTGGGLFGSSTTP 156



 Score = 36.6 bits (83), Expect = 0.028
 Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 8/116 (6%)
 Frame = +3

Query: 120 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFG--------QTSTATNPFGSPTTAFGAQTG 275
           MFGS N         FG T +N   + +G G         T+T  + F  P+T  G   G
Sbjct: 527 MFGSANS-STPGTGLFGSTQTNNATSNTGTGLFGSNNANTTNTGGSLFNKPSTTTGGLFG 585

Query: 276 TTSPFGATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSPFG 443
            T+    +++T+G FG  +                     Q   P   +   +P+G
Sbjct: 586 NTTAQQPSTTTSGLFGASNTNNQAQTSNFGTGLFGGSQAGQQQQPLQASIDQNPYG 641



 Score = 35.8 bits (81), Expect = 0.048
 Identities = 32/97 (32%), Positives = 40/97 (41%), Gaps = 24/97 (24%)
 Frame = +3

Query: 120 MFGSTNPFGQSSAS-AFGQTSSNP---FGAQSG------FGQTSTATNPFGSPTT----- 254
           MFG  N  G    + AFGQ +      FG+ S       FG  +T+T  FG  TT     
Sbjct: 1   MFGQNNSSGFGGGTGAFGQNNQQTGGLFGSNSNTPGNTLFGSQNTSTTGFGQNTTQPLFG 60

Query: 255 ------AFGAQTGTTSPFG---ATSSTAGAFGQPSAP 338
                  FG +  TT+  G     SS  G FGQ + P
Sbjct: 61  SNTNGGLFGNRNNTTTTGGTGFGMSSGTGMFGQSNTP 97



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 10/116 (8%)
 Frame = +3

Query: 120 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQT------GTT 281
           +FGS N    ++ +  GQT+   FG  +    T T T  FGS T  FG+ T      GT 
Sbjct: 353 LFGSNN----ATNTGTGQTTGGLFGGAA----TGTGTG-FGSSTGGFGSNTNNQPNSGTM 403

Query: 282 SP----FGATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
                 FGA ++TA     P++                    +PS   FG+ +++P
Sbjct: 404 GTGLFGFGANNNTANNNTAPTSTFGGNNSSNFSFGANNNAATKPSGFGFGSTTTTP 459



 Score = 33.5 bits (75), Expect = 0.24
 Identities = 31/131 (23%), Positives = 44/131 (33%), Gaps = 24/131 (18%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNP--------------------FGAQSGFGQTSTATNPFG 242
           FGST     S   +FGQ ++N                     FG       T+TATN  G
Sbjct: 452 FGSTTTTPASGGFSFGQNANNAPKPAFGSTATTAPKPAGTGLFGGLGAGANTNTATNATG 511

Query: 243 SPTTAFG-AQTGTTSPFGATSST---AGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTP 410
           +  + FG A T  ++ FG+ +S+    G FG                             
Sbjct: 512 TGGSLFGNANTAGSNMFGSANSSTPGTGLFGSTQTNNATSNTGTGLFGSNNANTTNTGGS 571

Query: 411 AFGTPSSSPFG 443
            F  PS++  G
Sbjct: 572 LFNKPSTTTGG 582



 Score = 32.3 bits (72), Expect = 0.53
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
 Frame = +3

Query: 132 TNPFGQSSASAFGQTSSNPFGAQ-SGFGQTSTATNP------FG-----SPTTAFGAQTG 275
           T+ FG +++S F   ++N    + SGFG  ST T P      FG     +P  AFG+ T 
Sbjct: 424 TSTFGGNNSSNFSFGANNNAATKPSGFGFGSTTTTPASGGFSFGQNANNAPKPAFGS-TA 482

Query: 276 TTSPFGATSSTAGAFG 323
           TT+P  A +   G  G
Sbjct: 483 TTAPKPAGTGLFGGLG 498



 Score = 32.0 bits (71), Expect = 0.70
 Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
 Frame = +3

Query: 129 STNPFGQS------SASAFGQTS-------SNPFGAQSGFGQTSTATNPFGSPT-TAFGA 266
           ST PFGQ+      +A+ FG ++       S  FG  S FG  +T T  FGS T  A G 
Sbjct: 248 STTPFGQNLSGTTNNATPFGTSNATNTTPGSGLFGGGSAFGSNTTNTG-FGSGTNNASGG 306

Query: 267 QTGTTSPFGATSSTAGAFG 323
             G  +   +T ST G FG
Sbjct: 307 LFGQNNNTTSTPST-GLFG 324



 Score = 31.6 bits (70), Expect = 0.91
 Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 19/91 (20%)
 Frame = +3

Query: 120 MFGSTNPFGQSSASAFGQTSSNP-FGAQS-----------------GFGQTSTATNPFG- 242
           +FGS N    +S + FGQ ++ P FG+ +                 GFG +S  T  FG 
Sbjct: 39  LFGSQN----TSTTGFGQNTTQPLFGSNTNGGLFGNRNNTTTTGGTGFGMSS-GTGMFGQ 93

Query: 243 SPTTAFGAQTGTTSPFGATSSTAGAFGQPSA 335
           S T AFG     T+P G      G FG  +A
Sbjct: 94  SNTPAFGGTNNATNPSG-----GGLFGSNTA 119



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQ---TSSNP----FGAQSGFGQTSTATNPFGSPTTAFGAQTGTT 281
           FGS      +S   FGQ   T+S P    FG  S F Q   A + FGS T      TG T
Sbjct: 296 FGSGT--NNASGGLFGQNNNTTSTPSTGLFGG-STFNQQKPAFSGFGSTTNTTNTGTG-T 351

Query: 282 SPFGATSSTAGAFGQ 326
             FG+ ++T    GQ
Sbjct: 352 GLFGSNNATNTGTGQ 366



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = +3

Query: 144 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST----- 308
           G+   +A    +++ FG+   FG    +T PFG         T   +PFG +++T     
Sbjct: 224 GRRFGNASSTNTTSAFGSTPAFG---ASTTPFGQ---NLSGTTNNATPFGTSNATNTTPG 277

Query: 309 AGAFGQPSA 335
           +G FG  SA
Sbjct: 278 SGLFGGGSA 286

---

>PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 121 (Pore|
            membrane protein of 121 kDa) (P145)
          Length = 1199

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 34/109 (31%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
 Frame = +3

Query: 123  FGSTNPFGQSSASA-FGQTSSNPFG--AQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFG 293
            FGS+  FG S ASA     +   FG  AQ  FG    + + FG+P +   A   TTS F 
Sbjct: 953  FGSSFTFGNSVASAPSAAPAPAAFGGAAQPAFGGLKASASTFGTPASTQPAFGSTTSVFS 1012

Query: 294  ATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSPF 440
              S+T   FG  +A                      S+  FG+ + SPF
Sbjct: 1013 FGSATTSGFGAAAATTQTTHSGS-------------SSSLFGSSTPSPF 1048



 Score = 36.2 bits (82), Expect = 0.037
 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
 Frame = +3

Query: 123  FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 302
            FGST     +S  +FG  +++ FGA +   QT+ +    GS ++ FG+ T +   FG ++
Sbjct: 1004 FGST-----TSVFSFGSATTSGFGAAAATTQTTHS----GSSSSLFGSSTPSPFTFGGSA 1054

Query: 303  STA--GAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSPFG 443
            + A  G FG  + P                     +T   G+ S +  G
Sbjct: 1055 APAGGGGFGLSATPGTGSTSGTFSFGSGQSGTTGTTTSFGGSLSQNTLG 1103



 Score = 35.4 bits (80), Expect = 0.063
 Identities = 36/130 (27%), Positives = 49/130 (37%), Gaps = 22/130 (16%)
 Frame = +3

Query: 120  MFGSTNP----FGQSSASA----FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQ-- 269
            +FGS+ P    FG S+A A    FG +++   G+ SG     +  +     TT+FG    
Sbjct: 1039 LFGSSTPSPFTFGGSAAPAGGGGFGLSATPGTGSTSGTFSFGSGQSGTTGTTTSFGGSLS 1098

Query: 270  ------TGTTSPF----GATSSTAGAFGQPSAPXXXXXXXX--XXXXXXXXXXXQPSTPA 413
                     +SPF    G+T  +   FG  S P                      PSTPA
Sbjct: 1099 QNTLGAPSQSSPFAFSVGSTPESKPVFGGTSTPTFGQSAPAPGVGTTGSSLSFGAPSTPA 1158

Query: 414  FGTPSSSPFG 443
             G     PFG
Sbjct: 1159 QGFVGVGPFG 1168



 Score = 32.3 bits (72), Expect = 0.53
 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 129  STNPFGQSS-ASAFGQTSSN-PFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 287
            ST  FGQS+ A   G T S+  FGA S   Q      PFGS   +F    G+ +P
Sbjct: 1129 STPTFGQSAPAPGVGTTGSSLSFGAPSTPAQGFVGVGPFGSGAPSFSIGAGSKTP 1183

---

>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)|
           (Translocated in liposarcoma protein) (POMp75) (75 kDa
           DNA-pairing protein)
          Length = 526

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
 Frame = +3

Query: 132 TNPFGQSSASAFGQTSSNPFGAQS---------GFGQTSTATNPFGSPTT--AFGAQTGT 278
           T+ +GQSS S++GQ+ +  +G QS         G+G + ++ + +G  ++   +G Q   
Sbjct: 47  TSGYGQSSYSSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAP 106

Query: 279 TSPFGA--TSSTAGAFGQPSA 335
           +S  G+  +SS + ++GQP +
Sbjct: 107 SSTSGSYGSSSQSSSYGQPQS 127

---

>NUP54_DROME (Q9V6B9) Probable nucleoporin Nup54|
          Length = 610

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 36/110 (32%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 302
           FGS    G +S  A  +T+   FG  S FG T+  + P      AFGAQ  +T  FGA  
Sbjct: 4   FGSNTSLGATSTPA--KTTGGLFG--SPFGGTAATSQP----APAFGAQATSTPAFGAQP 55

Query: 303 STAGAFGQPS---APXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSPFG 443
           +T+ AFG  S   A                      STPAFG  +++  G
Sbjct: 56  ATS-AFGAGSAFGATAAAPAFGAATGTSAFGGSAFGSTPAFGAATTTTAG 104



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 37/120 (30%), Positives = 48/120 (40%), Gaps = 25/120 (20%)
 Frame = +3

Query: 150 SSASAFG-QTSSNPFGAQSGFGQTS--------TATNPFGSP----TTAFGAQTGTTS-- 284
           +S  AFG Q +++ FGA S FG T+        T T+ FG      T AFGA T TT+  
Sbjct: 46  TSTPAFGAQPATSAFGAGSAFGATAAAPAFGAATGTSAFGGSAFGSTPAFGAATTTTAGT 105

Query: 285 --------PFGATSST--AGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
                    FGA  +T  AG FG P+                           FGT ++S
Sbjct: 106 GLGGGGFGGFGAAPATSQAGLFGAPATSAAPPAFSGFGQQAAASTAPASGFSGFGTTTTS 165



 Score = 31.2 bits (69), Expect = 1.2
 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP----F 290
           FG+     Q+       TS+ P  A SGFGQ + A+    S  + FG  T T++P    F
Sbjct: 115 FGAAPATSQAGLFGAPATSAAP-PAFSGFGQQAAASTAPASGFSGFGTTT-TSAPAFGGF 172

Query: 291 GATSST---AGAFG 323
           G + ST    GAFG
Sbjct: 173 GTSQSTGFGGGAFG 186

---

>NUPL2_BRARE (Q6P0U9) Nucleoporin-like 2|
          Length = 414

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 38/113 (33%), Positives = 47/113 (41%), Gaps = 7/113 (6%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTS-SNP----FGAQSGFGQTSTATNPFGSPTTAFGA-QTGTTS 284
           FGS  P   S+ S FG TS S+P     GA  G G  S++T  F    T FGA  T   S
Sbjct: 207 FGSPGPGFGSATSGFGNTSLSSPPAGFGGAGFGSGPQSSSTFSFAQSKTDFGASNTQQAS 266

Query: 285 PFGATSSTAGAFGQPSAPXXX-XXXXXXXXXXXXXXXXQPSTPAFGTPSSSPF 440
            FG++     AF QPS+                     +PS   FG+ S   F
Sbjct: 267 GFGSS-----AFAQPSSGFGNPAPSAASFSFAAADSESKPSAGGFGSASGFSF 314



 Score = 40.0 bits (92), Expect = 0.003
 Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
 Frame = +3

Query: 123 FGSTNPF-------GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTT 281
           FGS + F       GQ S    G  SS+ FG+ SGFG +S   + FGS   A  +  G+T
Sbjct: 306 FGSASGFSFKTATAGQGSGFGSGFGSSSGFGSSSGFGSSSGFGSAFGSAAPAQSSSFGST 365

Query: 282 SPFGATSSTAGAF 320
                T S  G F
Sbjct: 366 GGAADTQSGHGLF 378



 Score = 33.1 bits (74), Expect = 0.31
 Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNP----FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF 290
           FG+  P   S + A   + S P    FG+ SGF    TAT   GS    FG+  G++S F
Sbjct: 280 FGNPAPSAASFSFAAADSESKPSAGGFGSASGFS-FKTATAGQGS---GFGSGFGSSSGF 335

Query: 291 GATSSTAGAFGQPSA 335
           G++S    + G  SA
Sbjct: 336 GSSSGFGSSSGFGSA 350

---

>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)|
          Length = 1971

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 36/116 (31%), Positives = 44/116 (37%), Gaps = 13/116 (11%)
 Frame = +3

Query: 135 NPFGQSSASAFGQTSSNP----------FGAQSGFGQTSTATNPFG-SPTTAFGAQTGTT 281
           NPFG SS SAF  +SS            FG  S FGQ ST +     S   +F   +G  
Sbjct: 5   NPFGGSSPSAFAVSSSTTGTYQTKSPFRFGQPSLFGQNSTPSKSLAFSQVPSFATPSG-- 62

Query: 282 SPFGATSSTAGAFG--QPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSPFG 443
              G+ SS+  AFG  Q S+                     P   AF   S+S  G
Sbjct: 63  ---GSHSSSLPAFGLTQTSSVGLFSSLESTPSFAATSSSSVPGNTAFSFKSTSSVG 115

---

>NUPL_MOUSE (Q8K2K6) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein|
           homolog)
          Length = 561

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 40/160 (25%), Positives = 60/160 (37%), Gaps = 26/160 (16%)
 Frame = +3

Query: 42  AAVDPILXXXXXXXXXXXXXXXXXXXMFGSTNPFGQSSASA--------FGQT-SSNPFG 194
           A +D +                    +FG T P G S+ +         FG T S+NPF 
Sbjct: 378 AELDSVFSSAATSSNAYTPTSNASSSVFG-TVPVGASAQTQPASSGPAPFGATPSTNPFV 436

Query: 195 AQSGFGQTSTATNPF-----GSPTTAFGAQT-------GTTSPFGATSSTAGAFGQPSAP 338
           A +G    +++TNPF     G+    FG  +       GT + +   +S +G+F QP+ P
Sbjct: 437 AATG-PSAASSTNPFQTNARGATAATFGTASMSMPAGFGTPAQYSLPTSFSGSFQQPAFP 495

Query: 339 XXXXXXXXXXXXXXXXXXXQPSTPAFGT-----PSSSPFG 443
                              QP+   F T     P  +PFG
Sbjct: 496 ------AQAAFPQQTAFSQQPNGAGFATFGQTKPVVTPFG 529

---

>NU116_YEAST (Q02630) Nucleoporin NUP116/NSP116 (Nuclear pore protein|
           NUP116/NSP116)
          Length = 1113

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
 Frame = +3

Query: 123 FGSTN-----PFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 287
           FG+ N      FGQ +  AF Q  +   G+   FGQ++   N       AFG Q GT + 
Sbjct: 297 FGANNVSNGGAFGQVNRGAFPQQQTQQ-GSGGIFGQSNANANG-----GAFGQQQGTGAL 350

Query: 288 FGATSSTAGAFGQ 326
           FGA  ++ G FGQ
Sbjct: 351 FGAKPASGGLFGQ 363



 Score = 35.0 bits (79), Expect = 0.082
 Identities = 32/75 (42%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
 Frame = +3

Query: 129 STNPFGQSSASAFG--QTSSNPFGAQSGFG---QTSTATNP-FGSPTTAFGAQTGTTSPF 290
           +T PFG S+ S FG  Q    P    S FG   QT+T   P FG+    FG QT + SPF
Sbjct: 13  TTQPFG-STGSTFGGQQQQQQPVANTSAFGLSQQTNTTQAPAFGN----FGNQT-SNSPF 66

Query: 291 GATSSTAG---AFGQ 326
           G + ST      FGQ
Sbjct: 67  GMSGSTTANGTPFGQ 81



 Score = 34.3 bits (77), Expect = 0.14
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
 Frame = +3

Query: 150 SSASAFGQTSSNPFGAQS-GFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA----- 311
           +S   FG   SN  G    G  Q +   NP  +    FG++  T S FG T+STA     
Sbjct: 569 ASGGLFGSKPSNTVGGGLFGNNQVANQNNPASTSGGLFGSKPATGSLFGGTNSTAPNASS 628

Query: 312 -GAFGQPSA 335
            G FG  +A
Sbjct: 629 GGIFGSNNA 637



 Score = 30.4 bits (67), Expect = 2.0
 Identities = 24/73 (32%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
 Frame = +3

Query: 237 FGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAF 416
           FG    AF   + TT PFG+T ST G   Q   P                       PAF
Sbjct: 2   FGVSRGAF--PSATTQPFGSTGSTFGGQQQQQQPVANTSAFGLSQQTNTT-----QAPAF 54

Query: 417 GT----PSSSPFG 443
           G      S+SPFG
Sbjct: 55  GNFGNQTSNSPFG 67



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
 Frame = +3

Query: 192 GAQSGFGQTSTAT---NPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSA 335
           G + G  Q  T T   NP G+  T FG      S   AT  T G FGQ  A
Sbjct: 164 GRKFGTSQNGTGTTFNNPQGTTNTGFGIMGNNNSTTSAT--TGGLFGQKPA 212



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
 Frame = +3

Query: 150 SSASAFGQTSSNPFGA-QSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 323
           +S +  G T +NP G   +GFG      +   + T     Q   T  FG  + + G FG
Sbjct: 169 TSQNGTGTTFNNPQGTTNTGFGIMGNNNSTTSATTGGLFGQKPATGMFGTGTGSGGGFG 227

---

>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore|
            membrane protein of 121 kDa) (P145)
          Length = 1229

 Score = 37.4 bits (85), Expect = 0.017
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 12/78 (15%)
 Frame = +3

Query: 141  FGQSSASAFG-QTSSNPFGA----QSGFGQTSTATNPFGSPTTA-FGAQTGTTSP----- 287
            FG ++ SAFG + +++ FGA    Q  FG  STA   FG+ T++ FGA T T S      
Sbjct: 1009 FGGATHSAFGLKATASAFGAPASSQPAFGG-STAVFSFGAATSSGFGATTQTASSGSSSS 1067

Query: 288  -FGATSSTAGAFGQPSAP 338
             FG+T+ +   FG  +AP
Sbjct: 1068 VFGSTTPSPFTFGGSAAP 1085



 Score = 33.5 bits (75), Expect = 0.24
 Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 12/111 (10%)
 Frame = +3

Query: 144  GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA--GA 317
            G ++  +FG  +S+ FGA       +T T   GS ++ FG+ T +   FG +++ A  G+
Sbjct: 1038 GSTAVFSFGAATSSGFGA-------TTQTASSGSSSSVFGSTTPSPFTFGGSAAPAGSGS 1090

Query: 318  FG-QPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFG---------TPSSSPF 440
            FG   + P                     STP  G         T  S+PF
Sbjct: 1091 FGINVATPGSSATTGAFSFGAGQSGSTATSTPFTGGLGQNALGTTGQSTPF 1141



 Score = 30.0 bits (66), Expect = 2.7
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = +3

Query: 141  FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPF---GSPTTAFGAQTGTTSPFGATSSTA 311
            FG +++S FG T+       S     ST  +PF   GS   A     G       +S+T 
Sbjct: 1045 FGAATSSGFGATTQTASSGSSSSVFGSTTPSPFTFGGSAAPAGSGSFGINVATPGSSATT 1104

Query: 312  GAF 320
            GAF
Sbjct: 1105 GAF 1107



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 42/135 (31%), Positives = 52/135 (38%), Gaps = 27/135 (20%)
 Frame = +3

Query: 120  MFGSTNP----FGQSSASA----FGQTSSNP----------FGA-QSGFGQTSTATNPF- 239
            +FGST P    FG S+A A    FG   + P          FGA QSG   TST   PF 
Sbjct: 1068 VFGSTTPSPFTFGGSAAPAGSGSFGINVATPGSSATTGAFSFGAGQSGSTATST---PFT 1124

Query: 240  -GSPTTAFGAQTGTTSPF----GATSSTAGAFGQPSAPXXXXXXXX--XXXXXXXXXXXQ 398
             G    A G  TG ++PF     +T+ +   FG  + P                      
Sbjct: 1125 GGLGQNALGT-TGQSTPFAFNVSSTTESKPVFGGTATPTFGLNTPAPGVGTSGSSLSFGA 1183

Query: 399  PSTPAFGTPSSSPFG 443
             S PA G    +PFG
Sbjct: 1184 SSAPAQGFVGVAPFG 1198

---

>GAMP_PROCL (Q7M3P2) Gastrolith matrix protein (Fragment)|
          Length = 96

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSP---TTAFGAQTGTTSPFG 293
           FGSTN         FG +   P    +GFG    A+  FGSP   + AFG+ +  +   G
Sbjct: 15  FGSTN---------FGSSGFGPSLGSTGFGSAGFASPGFGSPSLGSAAFGSSSFGSPSLG 65

Query: 294 ATSSTAGAFGQPS 332
           +T   + +FG  S
Sbjct: 66  STGFGSSSFGSTS 78

---

>NUPL_RAT (Q4KLH5) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein|
           homolog)
          Length = 561

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 40/160 (25%), Positives = 58/160 (36%), Gaps = 26/160 (16%)
 Frame = +3

Query: 42  AAVDPILXXXXXXXXXXXXXXXXXXXMFGSTNPFG--------QSSASAFGQT-SSNPFG 194
           A +D +                    +FG T P G         S  + FG T S+NPF 
Sbjct: 378 AELDSVFSSAATSNNAYTSTSNASSSVFG-TVPVGASPQTQPASSGPAPFGATPSTNPFV 436

Query: 195 AQSGFGQTSTATNPF-----GSPTTAFGAQT-------GTTSPFGATSSTAGAFGQPSAP 338
           A +G    +++TNPF     G+    FG  +       GT + +   +S +G+F QP  P
Sbjct: 437 AATG-PSAASSTNPFQTNARGATAATFGTASMSMPAGFGTPAQYSLPTSFSGSFQQPPFP 495

Query: 339 XXXXXXXXXXXXXXXXXXXQPSTPAFGT-----PSSSPFG 443
                              QP+   F T     P  +PFG
Sbjct: 496 ------AQAAFPQQTAFSQQPNGAGFATFGQTKPVVTPFG 529



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 7/46 (15%)
 Frame = +3

Query: 123 FGSTNP----FGQSSASAFGQTSSNPF--GAQSG-FGQTSTATNPF 239
           FG T P    FGQ +A+     SSNPF  GA +G F   S++TNPF
Sbjct: 518 FGQTKPVVTPFGQVAAAG---VSSNPFMTGAPTGQFPTGSSSTNPF 560



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = +3

Query: 126 GSTNPFGQSSASAF-GQTSSNPFGAQSGFGQ-TSTATNPFGSPTTAFGAQTGTTSPFGAT 299
           G   P   S  ++F G     PF AQ+ F Q T+ +  P G+    FG      +PFG  
Sbjct: 472 GFGTPAQYSLPTSFSGSFQQPPFPAQAAFPQQTAFSQQPNGAGFATFGQTKPVVTPFGQV 531

Query: 300 SSTAGAFGQP 329
           ++ AG    P
Sbjct: 532 AA-AGVSSNP 540

---

>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor|
          Length = 725

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 22/101 (21%), Positives = 41/101 (40%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 308
           ST+P   S++S+   TSS+     S    TS ++    S  T+  + + +TS    ++S+
Sbjct: 197 STSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSS 256

Query: 309 AGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSS 431
           +     PS+                      ST ++ T +S
Sbjct: 257 SSTSTSPSSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTS 297



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 12/114 (10%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGT----TSPFGA 296
           ST+    S++++   TS++P  + +    +ST+T+P    T+A    T +    TSP   
Sbjct: 244 STSTSQSSTSTSSSSTSTSP--SSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSLT 301

Query: 297 TSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQ--------PSTPAFGTPSSS 434
           +SS   A   PS+                             PSTP +  PS+S
Sbjct: 302 SSSPTLASTSPSSTSISSTFTDSTSSLGSSIASSSTSVSLYSPSTPVYSVPSTS 355



 Score = 30.4 bits (67), Expect = 2.0
 Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 1/103 (0%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 308
           ST+    S++S+   TS +     S    TS+++      +T+  + + +TSP   ++S+
Sbjct: 211 STSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSS 270

Query: 309 AGAFGQPSAPXXXXXXXXXXXXXXXXX-XXQPSTPAFGTPSSS 434
           +     PS+                       S+P   + S S
Sbjct: 271 SSTSTSPSSKSTSASSTSTSSYSTSTSPSLTSSSPTLASTSPS 313



 Score = 30.0 bits (66), Expect = 2.7
 Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
 Frame = +3

Query: 174 TSSNPFG---AQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPXX 344
           TSSNP     + +    +ST+T+P  + T++    T ++S   ++SST+ +    S    
Sbjct: 177 TSSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSS 236

Query: 345 XXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
                              S+    +PSS+
Sbjct: 237 LTSTSSSSTSTSQSSTSTSSSSTSTSPSST 266

---

>GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-) (Germline|
           helicase 1)
          Length = 763

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 29/70 (41%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNPFG-AQSGFGQTSTATNPFGS--PTTAFGAQTGTTSPFG 293
           FG  N  G  S    G T  +P+G A SGFG  STAT+ FGS   ++AFG   G      
Sbjct: 74  FGGGNTCG--SGFGGGSTGGSPYGGASSGFGG-STATSGFGSGEKSSAFGGSGGFGGSAT 130

Query: 294 ATSSTAGAFG 323
              S  G+FG
Sbjct: 131 GFGSGGGSFG 140



 Score = 36.2 bits (82), Expect = 0.037
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
 Frame = +3

Query: 144 GQSSASAFG--QTSSNPFGAQ----SGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 305
           G +  S FG  +T  + FG      SGFG  ST  +P+G  ++ FG  T  TS FG +  
Sbjct: 57  GNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGGST-ATSGFG-SGE 114

Query: 306 TAGAFG 323
            + AFG
Sbjct: 115 KSSAFG 120



 Score = 33.5 bits (75), Expect = 0.24
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
 Frame = +3

Query: 144 GQSSASAFG--QTSSNPFGAQ----SGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 305
           G +  S FG   T  + FG      SGFG  +T  + FG  +T      G +S FG +++
Sbjct: 47  GNTGGSGFGGGNTGGSGFGGGKTGGSGFGGGNTCGSGFGGGSTGGSPYGGASSGFGGSTA 106

Query: 306 TAG 314
           T+G
Sbjct: 107 TSG 109

---

>NSP1_YEAST (P14907) Nucleoporin NSP1 (Nuclear pore protein NSP1)|
           (Nucleoskeletal-like protein) (p110)
          Length = 823

 Score = 36.6 bits (83), Expect = 0.028
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGF-----GQTSTATNPFGSPTT---AFGAQTGTTS 284
           +TN    + A AFG T  + FG  +          S+ T  FGS  T   AFG    T++
Sbjct: 24  TTNQNSSTGAGAFG-TGQSTFGFNNSAPNNTNNANSSITPAFGSNNTGNTAFGNSNPTSN 82

Query: 285 PFGATSSTAGAFGQPSA 335
            FG+ +ST   FG  SA
Sbjct: 83  VFGSNNSTTNTFGSNSA 99

---

>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)|
          Length = 512

 Score = 36.2 bits (82), Expect = 0.037
 Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQT-----GTTSPFG 293
           S  P+GQ S   +GQ++       SG+GQ S+ +  +G    ++  Q+     G+   +G
Sbjct: 29  SNQPYGQQSYGGYGQSTDT-----SGYGQ-SSYSGSYGQTQNSYSTQSAPQGYGSAGGYG 82

Query: 294 ATSSTAGAFGQPSA 335
           ++ S+  ++GQ S+
Sbjct: 83  SSQSSQSSYGQQSS 96



 Score = 35.0 bits (79), Expect = 0.082
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = +3

Query: 129 STNPFGQSS-ASAFGQTSSNPFGAQSGFG--QTSTATNPFGSPTTAFGAQTGTTSPFGAT 299
           ++  +G SS +S +GQ     +G QSG+G  Q S       +P   +G Q+   S  G  
Sbjct: 109 TSGSYGSSSQSSGYGQPQGGGYGQQSGYGGQQQSYGQQQSYNPPQGYGQQSQYNSSGGGG 168

Query: 300 SSTAGAFGQ 326
               G++GQ
Sbjct: 169 GGGGGSYGQ 177



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 14/80 (17%)
 Frame = +3

Query: 132 TNPFGQSSAS-AFGQTSSN--------PFGAQSGFGQTSTATNPFGSPTTAFG-----AQ 269
           T+ +GQSS S ++GQT ++         +G+  G+G + ++ + +G  ++  G     A 
Sbjct: 47  TSGYGQSSYSGSYGQTQNSYSTQSAPQGYGSAGGYGSSQSSQSSYGQQSSYPGYGQQPAP 106

Query: 270 TGTTSPFGATSSTAGAFGQP 329
           + T+  +G++S ++G +GQP
Sbjct: 107 SSTSGSYGSSSQSSG-YGQP 125

---

>NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (DNup214)
          Length = 1711

 Score = 35.4 bits (80), Expect = 0.063
 Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +3

Query: 141  FGQSSASA---FGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA 311
            FGQSSA+A    G   SNP G+           + FGSP TA  A  G+    G++S   
Sbjct: 1512 FGQSSAAAPAAGGNIFSNPVGSPQASPFGGGGNSIFGSPATAPPASGGSIFGGGSSSGGF 1571

Query: 312  GAFGQ 326
            G+F Q
Sbjct: 1572 GSFTQ 1576



 Score = 32.3 bits (72), Expect = 0.53
 Identities = 21/64 (32%), Positives = 26/64 (40%)
 Frame = +3

Query: 132  TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA 311
            +NP G   AS FG       G  S FG  +TA    G      G+ +G    F  T+   
Sbjct: 1528 SNPVGSPQASPFGG------GGNSIFGSPATAPPASGGSIFGGGSSSGGFGSFTQTTPAQ 1581

Query: 312  GAFG 323
            G FG
Sbjct: 1582 GGFG 1585



 Score = 32.0 bits (71), Expect = 0.70
 Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
 Frame = +3

Query: 135  NPFGQSSASAFGQTSSNP---FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 305
            +PFG    S FG  ++ P    G+  G G +S     F   T A G   G     G  S 
Sbjct: 1537 SPFGGGGNSIFGSPATAPPASGGSIFGGGSSSGGFGSFTQTTPAQGGFGGGFGQGGGGSV 1596

Query: 306  TAGAFGQPSAP 338
                FG P AP
Sbjct: 1597 AQTGFGSPQAP 1607

---

>NU153_HUMAN (P49790) Nuclear pore complex protein Nup153 (Nucleoporin Nup153)|
            (153 kDa nucleoporin)
          Length = 1475

 Score = 35.4 bits (80), Expect = 0.063
 Identities = 34/129 (26%), Positives = 43/129 (33%), Gaps = 25/129 (19%)
 Frame = +3

Query: 123  FGSTNPFGQSSASAFGQ-----------TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQ 269
            FG+T     S +  F Q           T+  PF    G    +T T+ FG   T   + 
Sbjct: 1240 FGNTAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNTTTSGFGFGATTTSSS 1299

Query: 270  TGTTSPFGATSSTAGA-----------FGQ---PSAPXXXXXXXXXXXXXXXXXXXQPST 407
             G++  FG   S   A           FGQ    S P                   QP+ 
Sbjct: 1300 AGSSFVFGTGPSAPSASPAFGANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAP 1359

Query: 408  PAFGTPSSS 434
            P FGT SSS
Sbjct: 1360 PTFGTVSSS 1368



 Score = 35.0 bits (79), Expect = 0.082
 Identities = 30/72 (41%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
 Frame = +3

Query: 141  FGQSSASA----FGQT-SSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS---PFGA 296
            FG  S+S+    FGQ  S + FG  SG    S++   FGS TT F     + S    FGA
Sbjct: 1362 FGTVSSSSQPPVFGQQPSQSAFG--SGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGA 1419

Query: 297  TSSTAGAFGQPS 332
             SST  A  QPS
Sbjct: 1420 NSSTPAASAQPS 1431

---

>NUPL1_HUMAN (Q9BVL2) Nucleoporin p58/p45 (Nucleoporin-like 1)|
          Length = 599

 Score = 35.0 bits (79), Expect = 0.082
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
 Frame = +3

Query: 138 PFGQS-----SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP-FGAT 299
           PFG        +S  G ++   FG  SGFG ++T  + FG  TT     +G+ S  FG++
Sbjct: 491 PFGSGIGTGLQSSGLGSSNLGGFGTSSGFGCSTTGASTFGFGTT--NKPSGSLSAGFGSS 548

Query: 300 SSTAGAFGQP 329
           S++   F  P
Sbjct: 549 STSGFNFSNP 558

---

>NU159_YEAST (P40477) Nucleoporin NUP159 (Nuclear pore protein NUP159)|
          Length = 1460

 Score = 35.0 bits (79), Expect = 0.082
 Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 19/110 (17%)
 Frame = +3

Query: 162 AFGQTSSNPFGAQSGFGQTSTATNPFGS---------PTTAFGAQTGTTSPFGATSS--- 305
           AFG  +  P  ++  FG+ S     FGS           +AFG  +  T  FG+ +S   
Sbjct: 509 AFGAIAKEPSTSEYAFGKPSFGAPSFGSGKSSVESPASGSAFGKPSFGTPSFGSGNSSVE 568

Query: 306 ---TAGAFGQPS--APXXXXXXXXXXXXXXXXXXXQPS--TPAFGTPSSS 434
              +  AFG+PS   P                   +PS  T AFGT SS+
Sbjct: 569 PPASGSAFGKPSFGTPSFGSGNSSAEPPASGSAFGKPSFGTSAFGTASSN 618



 Score = 30.0 bits (66), Expect = 2.7
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
 Frame = +3

Query: 129 STNPFG-QSSASAFGQTSSNPFGAQS---GFGQT-----STATNPFGSPTTAFGAQTGTT 281
           S+ PFG + + S   +T++  FG+ S   GF +      S  T  FG+  + F +Q G  
Sbjct: 685 SSTPFGTKPNTSTKPKTNAFDFGSSSFGSGFSKALESVGSDTTFKFGTQASPFSSQLGNK 744

Query: 282 SPFGA 296
           SPF +
Sbjct: 745 SPFSS 749



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
 Frame = +3

Query: 141 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPT---------TAFGAQTGTTSPFG 293
           FG  S  + G +S  P  + S FG+ S  T  FGS           +AFG  +  TS FG
Sbjct: 555 FGTPSFGS-GNSSVEPPASGSAFGKPSFGTPSFGSGNSSAEPPASGSAFGKPSFGTSAFG 613

Query: 294 ATSS 305
             SS
Sbjct: 614 TASS 617



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = +3

Query: 141 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 320
           FG  S  + G +S+ P  + S FG+ S  T+ FG   TA   +T + S FG  +  + +F
Sbjct: 581 FGTPSFGS-GNSSAEPPASGSAFGKPSFGTSAFG---TASSNETNSGSIFGKAAFGSSSF 636

---

>NU145_YEAST (P49687) Nucleoporin NUP145 precursor (EC 3.4.21.-) (Nuclear pore|
           protein NUP145) [Contains: Nucleoporin NUP145N
           (N-NUP145); Nucleoporin NUP145C (C-NUP145)]
          Length = 1317

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +3

Query: 126 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNP--FGSPTTAFGAQTGTTSPFGAT 299
           GST  F  S+  A    +   FG  +    TST  N   FG PTT      G      +T
Sbjct: 117 GSTGLFSGSNNIASSTQNGGLFGNSNNNNITSTTQNGGLFGKPTTTPAGAGGLFGNSSST 176

Query: 300 SSTAGAFG 323
           +ST G FG
Sbjct: 177 NSTTGLFG 184

---

>NUPL2_XENTR (Q5FVW4) Nucleoporin-like 2|
          Length = 449

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
 Frame = +3

Query: 126 GSTNPFGQSSASAFGQ--TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 299
           G+TN    S+  AFG   TS+  FG  SG   T+ + +   S ++ FGA T +TS FG  
Sbjct: 261 GATNSLAGSNVPAFGNKPTSAPSFG--SGGAATAASFSFAPSSSSNFGATT-STSGFGNA 317

Query: 300 SSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
           S+TA   G  ++                      + PAFG  SSS
Sbjct: 318 SNTASFQGTANS---------------------AAAPAFGVASSS 341



 Score = 31.2 bits (69), Expect = 1.2
 Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
 Frame = +3

Query: 141 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT----AFGAQTGTTSP--FGATS 302
           F  SS+S FG T+S      SGFG  S   +  G+  +    AFG  + +T+   FG   
Sbjct: 297 FAPSSSSNFGATTST-----SGFGNASNTASFQGTANSAAAPAFGVASSSTAATGFGGGF 351

Query: 303 STAGA 317
           ST GA
Sbjct: 352 STTGA 356

---

>TROP_HUMAN (Q12816) Trophinin (MAGE-D3 antigen)|
          Length = 1387

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
 Frame = +3

Query: 144  GQSSASA-FGQTSSNPF------GAQSGFGQTSTATNPFGS---PTTAFGAQTGTTSPFG 293
            G SS SA FG T S            +GFG     +  FGS    +T FG    T++ FG
Sbjct: 897  GSSSTSANFGGTLSTSICFDGSPSTGAGFGGALNTSASFGSVLNTSTGFGGAMSTSADFG 956

Query: 294  ATSSTAGAFG 323
             T ST+  FG
Sbjct: 957  GTLSTSVCFG 966



 Score = 34.3 bits (77), Expect = 0.14
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 6/108 (5%)
 Frame = +3

Query: 129  STNPFGQSSASAFG----QTSSNPFGAQSGF-GQTSTATNPFGSPTTAFGAQTGTTSPFG 293
            ++  F   ++ +FG     ++S   G  S F G  ST+    G  ++ FG    TT+ F 
Sbjct: 757  TSTSFSSEASISFGGMPCTSASFSGGVSSSFSGPLSTSATFSGGASSGFGGTLSTTAGFS 816

Query: 294  ATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAF-GTPSSS 434
               ST+ +FG  SAP                     ++  F G+PSSS
Sbjct: 817  GVLSTSTSFG--SAPTTSTVFSSALSTSTGFGGILSTSVCFGGSPSSS 862



 Score = 33.9 bits (76), Expect = 0.18
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 9/70 (12%)
 Frame = +3

Query: 141  FGQSSASAFGQTSSNPFG------AQSGFGQTSTATNPFGSP---TTAFGAQTGTTSPFG 293
            F   ++S FG T S   G        + FG   T +  F S    +T FG    T+  FG
Sbjct: 797  FSGGASSGFGGTLSTTAGFSGVLSTSTSFGSAPTTSTVFSSALSTSTGFGGILSTSVCFG 856

Query: 294  ATSSTAGAFG 323
             + S++G+FG
Sbjct: 857  GSPSSSGSFG 866



 Score = 31.6 bits (70), Expect = 0.91
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
 Frame = +3

Query: 126  GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGS---PTTAFGAQTGTTSPFGA 296
            G++  FG    ++ G   S   G  +GFG     ++ FG       +FG+  GT++ F  
Sbjct: 1210 GTSTGFGGGLGTSAG--FSGGLGTSAGFGGGLVTSDGFGGGLGTNASFGSTLGTSAGFSG 1267

Query: 297  TSSTAGAFG-QPSA 335
              ST+  FG +P+A
Sbjct: 1268 GLSTSDGFGSRPNA 1281



 Score = 31.2 bits (69), Expect = 1.2
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = +3

Query: 150  SSASAFGQTSSNPFGAQSGFGQTSTATNPFG---SPTTAFGAQTGTTSPFGATSSTAGAF 320
            SS+ +FG T S        FG +   +  FG   S + +FG  + T++ FG T ST+  F
Sbjct: 860  SSSGSFGGTLSTSIC----FGGSPCTSTGFGGTLSTSVSFGGSSSTSANFGGTLSTSICF 915

Query: 321  -GQPS 332
             G PS
Sbjct: 916  DGSPS 920



 Score = 31.2 bits (69), Expect = 1.2
 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = +3

Query: 150  SSASAFG--QTSSNPFGAQSGFGQTSTATNPFGSP--TTAFGAQTGTTSPFGATSSTAGA 317
            S++  FG   +SS  FG     G  ST+    GSP  +T FG    T+  FG +SST+  
Sbjct: 850  STSVCFGGSPSSSGSFG-----GTLSTSICFGGSPCTSTGFGGTLSTSVSFGGSSSTSAN 904

Query: 318  FG 323
            FG
Sbjct: 905  FG 906



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = +3

Query: 123  FGSTNPFGQ--SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 296
            F ++  FG   S+A+ FG T SN  G    FG          S + +FG   GT+  FG 
Sbjct: 1059 FSTSAGFGGALSTAADFGGTPSNSIG----FGAAP-------STSVSFGGAHGTSLCFGG 1107

Query: 297  TSSTAGAFGQPS 332
              ST+  FG  S
Sbjct: 1108 APSTSLCFGSAS 1119



 Score = 30.4 bits (67), Expect = 2.0
 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
 Frame = +3

Query: 150  SSASAFGQTSSNPFGAQSGFGQTSTATNPF-GSPTTA--FGAQTGTTSPFGATSSTAGAF 320
            S++ +FG +SS      + FG T + +  F GSP+T   FG    T++ FG+  +T+  F
Sbjct: 890  STSVSFGGSSST----SANFGGTLSTSICFDGSPSTGAGFGGALNTSASFGSVLNTSTGF 945

Query: 321  G 323
            G
Sbjct: 946  G 946



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 25/95 (26%)
 Frame = +3

Query: 123  FGSTNPFGQSSASAFGQTSSNPFGAQS------------GFGQTSTATNPF-GSPTTAFG 263
            FGST   G S+  + G ++S+ FG++             GFG  S  +  F G P+T+ G
Sbjct: 1255 FGST--LGTSAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGFTGEPSTSTG 1312

Query: 264  AQTGTTSPFGATS------------STAGAFGQPS 332
              +G +S  G +             ST+G  G PS
Sbjct: 1313 FSSGPSSIVGFSGGPSTGVGFCSGPSTSGFSGGPS 1347



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
 Frame = +3

Query: 129  STNPFGQSSASA-FGQTSSNP--FGAQSG----FGQTSTATNPFG---SPTTAFGAQTGT 278
            ST   G  S SA FG T S    FG   G    FG        +G   S  T FG    T
Sbjct: 942  STGFGGAMSTSADFGGTLSTSVCFGGSPGTSVSFGSALNTNAGYGGAVSTNTDFGGTLST 1001

Query: 279  TSPFGATSSTAGAFG 323
            +  FG + ST+  FG
Sbjct: 1002 SVCFGGSPSTSAGFG 1016



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +3

Query: 207 FGQTSTATNPFG---SPTTAFGAQTGTTSPFGATSSTAGAFGQPSA 335
           FG + +++  FG   S +  FG    T++ FG T ST+ +FG  S+
Sbjct: 855 FGGSPSSSGSFGGTLSTSICFGGSPCTSTGFGGTLSTSVSFGGSSS 900

---

>NUPL2_XENLA (Q5XGN1) Nucleoporin-like 2|
          Length = 491

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 22/61 (36%), Positives = 25/61 (40%)
 Frame = +3

Query: 141 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 320
           F  S+ S FG T+SN     SGFG  S A    G+   A     G  S     S   G F
Sbjct: 325 FAPSTISGFGSTASN-----SGFGAASNAAGFQGAANIAAAPAFGVASSTAPASGFGGGF 379

Query: 321 G 323
           G
Sbjct: 380 G 380

---

>NUP54_HUMAN (Q7Z3B4) Nucleoporin p54 (54 kDa nucleoporin)|
          Length = 507

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
 Frame = +3

Query: 150 SSASAFGQTSSNPFGAQSGFGQTSTATN---PFGSPTTAFGAQTGTTSPFGATSSTAGAF 320
           S  S     ++ P G   GFG TST       F +PT      TGTT  FG T +    F
Sbjct: 9   SGTSGTAAATAAPAGGFGGFGTTSTTAGSAFSFSAPT-----NTGTTGLFGGTQNKGFGF 63

Query: 321 G 323
           G
Sbjct: 64  G 64



 Score = 31.2 bits (69), Expect = 1.2
 Identities = 21/67 (31%), Positives = 27/67 (40%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 302
           FG       ++ SAF  ++    G    FG T      FG   T FG  TGT++  G   
Sbjct: 25  FGGFGTTSTTAGSAFSFSAPTNTGTTGLFGGTQNKGFGFG---TGFGTTTGTSTGLGTGL 81

Query: 303 STAGAFG 323
            T   FG
Sbjct: 82  GTGLGFG 88



 Score = 30.0 bits (66), Expect = 2.7
 Identities = 21/50 (42%), Positives = 25/50 (50%)
 Frame = +3

Query: 189 FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAP 338
           FGA SG   T+ AT    +P   FG        FG TS+TAG+    SAP
Sbjct: 5   FGAPSGTSGTAAAT---AAPAGGFGG-------FGTTSTTAGSAFSFSAP 44

---

>NUP49_YEAST (Q02199) Nucleoporin NUP49/NSP49 (Nuclear pore protein NUP49/NSP49)|
          Length = 472

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
 Frame = +3

Query: 144 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF----GATSSTA 311
           G ++ASA G   S P G  S FG TST++ P       FGA+   TS F    G T++  
Sbjct: 141 GMNNASA-GLFGSKPAGGTSLFGNTSTSSAP-AQNQGMFGAKPAGTSLFGNNAGNTTTGG 198

Query: 312 GAFG 323
           G FG
Sbjct: 199 GLFG 202



 Score = 30.0 bits (66), Expect = 2.7
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
 Frame = +3

Query: 120 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPF----GSPTTA---FGAQ-TG 275
           +FGS  P G +S      TSS P   Q  FG     T+ F    G+ TT    FG++ TG
Sbjct: 149 LFGS-KPAGGTSLFGNTSTSSAPAQNQGMFGAKPAGTSLFGNNAGNTTTGGGLFGSKPTG 207

Query: 276 TTSPFGATSS 305
            TS FG++++
Sbjct: 208 ATSLFGSSNN 217

---

>RGS6_CAEEL (Q18563) Regulator of G-protein signaling rgs-6|
          Length = 737

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 24/63 (38%), Positives = 34/63 (53%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 308
           ST    +++A+A G + S    + S   QT T T+P  SPT+     +GTT+   ATSS 
Sbjct: 638 STKIGDEAAAAAAGASPSTSAPSTSTSVQTKTTTSPTKSPTSTTITTSGTTT--SATSSV 695

Query: 309 AGA 317
           A A
Sbjct: 696 ATA 698

---

>CU36_MANSE (Q8MUC5) Pupal cuticle protein 36 precursor (MsCP36) (MS-PCP36)|
          Length = 342

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 28/76 (36%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
 Frame = +3

Query: 123 FGSTNPFGQSSA-----SAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS- 284
           FG   P G  S      S FG   S   GA SGFG  +      G   + FG Q G  S 
Sbjct: 37  FGGAGPKGGGSGFGGAGSGFGGAGSGFGGAGSGFGGGAGGAFGHGGAGSGFGGQAGGYSG 96

Query: 285 PFGATSSTAGAFGQPS 332
             GA   + GA GQ S
Sbjct: 97  AGGAGGYSGGASGQYS 112

---

>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
           precursor
          Length = 943

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 24/105 (22%), Positives = 37/105 (35%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 308
           S+ P    +++     SS P  + +    TS ++ P  S  +       +T+P   TSS 
Sbjct: 469 SSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSV 528

Query: 309 AGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSPFG 443
                  S P                     ST A  + SS+PFG
Sbjct: 529 LPTSSVSSTPLSSANSTTATSASSTPLTSVNSTTA-TSASSTPFG 572



 Score = 30.0 bits (66), Expect = 2.7
 Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 3/105 (2%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS- 305
           S+ P    +++     SS P  + +    TS ++ P  S  +       +T+P   TSS 
Sbjct: 355 SSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSV 414

Query: 306 --TAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
             T+     P +                      +T A  TP SS
Sbjct: 415 LPTSSVSSTPLSSANSTTATSASSTPLSSVNSTTATSASSTPLSS 459

---

>NUPL1_RAT (P70581) Nucleoporin p58/p45 (Nucleoporin-like 1)|
          Length = 585

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = +3

Query: 138 PFGQS-----SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP-FGAT 299
           PFG        +S  G ++   FG  SGFG  +T  + FG  TT     +G+ S  FG++
Sbjct: 477 PFGSGIGTGLQSSGLGSSNLGGFGTSSGFGCGTTGASTFGFGTT--DKPSGSLSAGFGSS 534

Query: 300 SSTAGAFGQP 329
           S++   F  P
Sbjct: 535 STSGFNFSNP 544



 Score = 31.6 bits (70), Expect = 0.91
 Identities = 20/66 (30%), Positives = 31/66 (46%)
 Frame = +3

Query: 126 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 305
           G+    G +SA     TS++  G   GF + + +  PF  P T+  A +G T     TS+
Sbjct: 71  GTGFTLGGTSAGTTATTSASTTGFSLGFSKPAASATPFALPVTSTTA-SGLTLSSALTSA 129

Query: 306 TAGAFG 323
            A + G
Sbjct: 130 PAASTG 135

---

>AMO1_SCHPO (O74315) Nucleoporin-like protein amo1 (Aberrent microtubule|
           protein 1)
          Length = 475

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = +3

Query: 141 FGQSSASAF-GQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 317
           FG  + SAF  Q +++PF +Q+    + T +NP  +  ++FG+     S FG+ +S   A
Sbjct: 207 FGAPTTSAFTSQLNASPF-SQNTSSNSFTGSNPVQNNPSSFGS-----SSFGSATSGPSA 260

Query: 318 FGQPSAP 338
           FG  S P
Sbjct: 261 FGGISQP 267

---

>NUPL1_MOUSE (Q8R332) Nucleoporin p58/p45 (Nucleoporin-like 1)|
          Length = 587

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = +3

Query: 138 PFGQS-----SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP-FGAT 299
           PFG        +S  G ++   FG  SGFG  +T  + FG  TT     +G+ S  FG++
Sbjct: 479 PFGSGIGTGLQSSGLGSSNLGGFGTSSGFGCGTTGASTFGFGTT--DKPSGSLSAGFGSS 536

Query: 300 SSTAGAFGQP 329
           S++   F  P
Sbjct: 537 STSGFNFSNP 546



 Score = 32.0 bits (71), Expect = 0.70
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +3

Query: 144 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 323
           G +SA     TS++  G   GF + + +  PF  P T+  A +G T     TS+ A + G
Sbjct: 79  GGTSAGTAATTSASTTGFSLGFSKPAASATPFALPVTSTSA-SGLTLSSALTSTPAASTG 137



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 22/97 (22%), Positives = 32/97 (32%)
 Frame = +3

Query: 144 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 323
           G  S  +FG  +S+       FG   ++  P  +  +A G  TG    FG+  +T    G
Sbjct: 23  GAGSGFSFGTVASSTPSVGLNFGSLGSSVTPASTSASAGGFGTGL---FGSKPATGFTLG 79

Query: 324 QPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
             SA                      S   F  P +S
Sbjct: 80  GTSAGTAATTSASTTGFSLGFSKPAASATPFALPVTS 116

---

>NUP57_YEAST (P48837) Nucleoporin NUP57 (Nuclear pore protein NUP57)|
          Length = 541

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +3

Query: 123 FGSTNP-FGQSSASAFGQT-SSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 296
           FG + P  G ++   FG   ++N FG+     Q+ST    FG+        + +T+  G 
Sbjct: 41  FGGSQPNSGTATTGGFGANQATNTFGSNQ---QSSTGGGLFGNKPALGSLGSSSTTASGT 97

Query: 297 TSSTAGAFGQPSA 335
           T++  G FGQ +A
Sbjct: 98  TATGTGLFGQQTA 110

---

>HRBL_MOUSE (Q80WC7) HIV-1 Rev-binding protein-like protein (Rev/Rex activation|
           domain binding protein-related) (RAB-R)
          Length = 479

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 147 QSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF 290
           Q + S+FG   ++  G +        +TNPF + ++AF ++  TT+PF
Sbjct: 431 QQNGSSFGDLGTSKLGQRPLSQPAGISTNPFMTGSSAFASKPPTTNPF 478

---

>KCNAE_DROME (Q02280) Potassium voltage-gated channel protein eag (Ether-a-go-go|
            protein)
          Length = 1174

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = +3

Query: 153  SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 317
            +A+    TSS   G   G G  +T T P   PTTA G+ +GT +   AT++  G+
Sbjct: 1111 TAAQLPSTSSGGAGGGGGSGSGATPTTP--PPTTAGGSGSGTPTSTTATTTPTGS 1163

---

>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor|
          Length = 1161

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 23/100 (23%), Positives = 36/100 (36%)
 Frame = +3

Query: 138 PFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 317
           P   S+ +    TS+ P         TST +    +PTT+  + T TTS    T +T+  
Sbjct: 122 PTSTSTTTTKSSTSTTPTTTI-----TSTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTT 176

Query: 318 FGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
              P+                       +TP   T S++P
Sbjct: 177 STTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTP 216



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 21/103 (20%), Positives = 40/103 (38%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 308
           ST P   ++++    ++++     S    T T +    +PTT+  + T TTS    TS+T
Sbjct: 159 STTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTSTTSTTPTTS---TTSTT 215

Query: 309 AGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
                  + P                   + +TP   + S++P
Sbjct: 216 PTTSTTSTTPTTSTTPTTSTTSTTSQTSTKSTTPTTSSTSTTP 258



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 29/108 (26%), Positives = 39/108 (36%), Gaps = 10/108 (9%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTS--TATNPFGS-----PTTAFGAQTGTTSP 287
           ST P   S+ S   QTS+      +    T+  T+T P  S     PTT+  + T TTS 
Sbjct: 228 STTPT-TSTTSTTSQTSTKSTTPTTSSTSTTPTTSTTPTTSTTSTAPTTSTTSTTSTTST 286

Query: 288 FG---ATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGT 422
                 TS+T+  F   SA                     P+T    T
Sbjct: 287 ISTAPTTSTTSSTFSTSSASASSVISTTATTSTTFASLTTPATSTAST 334



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 9/112 (8%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF------ 290
           ST P   +++S F  +S++     S    TST      +P T+  +   TTS        
Sbjct: 288 STAPTTSTTSSTFSTSSASASSVISTTATTSTTFASLTTPATSTASTDHTTSSVSTTNAF 347

Query: 291 ---GATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
                T++T+  +   S+P                   +P+  +  T S+ P
Sbjct: 348 TTSATTTTTSDTYISSSSPSQVTSSAEPTTVSEVTSSVEPTRSSQVTSSAEP 399

---

>CU36A_MANSE (Q8T634) Pupal cuticle protein 36a precursor (CP36a)|
          Length = 280

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 28/76 (36%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
 Frame = +3

Query: 123 FGSTNPFGQSSA-----SAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS- 284
           FG   P G  S      S FG   S   GA SGFG  +      G   + FG Q G  S 
Sbjct: 37  FGGAGPKGGGSGFGGAGSGFGGAGSGFGGAGSGFGGGAGGGFGHGGAGSGFGGQAGGYSG 96

Query: 285 PFGATSSTAGAFGQPS 332
             GA     GA GQ S
Sbjct: 97  AGGAGGYIGGASGQYS 112

---

>CDSN_MOUSE (Q7TPC1) Corneodesmosin precursor|
          Length = 561

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG-TTSPFGATSS 305
           S +  G SS+S    + S  +   +G+ Q+S +    GS     G+QTG ++S  G++SS
Sbjct: 82  SFSSHGGSSSSQGSSSGSLIYKPGTGYSQSSYSYGSGGSRPGGSGSQTGSSSSQTGSSSS 141

Query: 306 TAGAFGQPS 332
            +G+ G  S
Sbjct: 142 QSGSSGSQS 150

---

>VG50_ICHV1 (Q00130) Hypothetical gene 50 protein|
          Length = 670

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +3

Query: 126 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS-PFGATS 302
           G+T     ++A   G T +         G T T T     PT A G  T TT+ P GAT 
Sbjct: 494 GATGTVTTTTAKPTGATGTVTVATAKPTGATGTVTTTTAKPTGANGTVTTTTAKPTGATG 553

Query: 303 STAGAFGQPS 332
           +      +P+
Sbjct: 554 TVTTTTAKPT 563

---

>PUM2_MOUSE (Q80U58) Pumilio homolog 2|
          Length = 1066

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +3

Query: 123 FGSTNPFGQS-SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 299
           +GS++    S S+S F      P  A  GFG  S+     GS  + FG+  G+++   AT
Sbjct: 524 YGSSSLTNSSQSSSLFSHGPGQPGSASLGFGSGSSLGAAIGSALSGFGSSVGSSASSSAT 583

---

>HBA1_SCHPO (Q09146) Brefeldin A resistance protein (Caffeine resistance|
           protein 1)
          Length = 399

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +3

Query: 144 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 323
           G+  ++A    S +PF   S F   S A++PF + +TA        S FGA +S+  AF 
Sbjct: 125 GKKESAAKPAASVSPF---SQFASFSNASSPFSNVSTASSEPKEEKSAFGAFASSKSAFT 181

Query: 324 QPS 332
             S
Sbjct: 182 MKS 184

---

>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2|
           precursor
          Length = 503

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 6/108 (5%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT------AFGAQTGTTSPF 290
           ST+   ++S     +TS++     S    ++T+T    S TT      +  + T TTS  
Sbjct: 140 STSVSSKTSTKLDTKTSTSSSATHSSSSSSTTSTTTSSSETTTSSSSSSSSSSTSTTSTT 199

Query: 291 GATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
             TSST      PS                       +T    + S++
Sbjct: 200 STTSSTTSTSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTSTA 247



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/88 (19%), Positives = 35/88 (39%)
 Frame = +3

Query: 150 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 329
           SS++    TSS+     S    +S++T+   + +T     + ++SP   +SST+ +    
Sbjct: 167 SSSTTSTTTSSSETTTSSSSSSSSSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASSSSE 226

Query: 330 SAPXXXXXXXXXXXXXXXXXXXQPSTPA 413
           ++                      STP+
Sbjct: 227 TSSTQATSSSTTSTSSSTSTATVTSTPS 254



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFG-QTSTATNPFGSPTTAFGAQTGTTSPFGATSS 305
           ST     S+A++   TSS+     S    +  T T+   S T +  + + T++   ++ +
Sbjct: 121 STADSTSSTATSTSTTSSSSTSVSSKTSTKLDTKTSTSSSATHSSSSSSTTSTTTSSSET 180

Query: 306 TAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
           T  +    S+                     PST +  T +SS
Sbjct: 181 TTSSSSSSSSSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASS 223

---

>NUP54_RAT (P70582) Nucleoporin p54 (54 kDa nucleoporin)|
          Length = 510

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 22/50 (44%), Positives = 26/50 (52%)
 Frame = +3

Query: 189 FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAP 338
           FGA SG   TSTAT    +P   FG        FG T++TAG+    SAP
Sbjct: 5   FGAPSGTSGTSTAT---AAPAGGFGG-------FGTTTTTAGSAFSFSAP 44

---

>NUP54_MOUSE (Q8BTS4) Nucleoporin p54 (54 kDa nucleoporin)|
          Length = 510

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 22/50 (44%), Positives = 26/50 (52%)
 Frame = +3

Query: 189 FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAP 338
           FGA SG   TSTAT    +P   FG        FG T++TAG+    SAP
Sbjct: 5   FGAPSGTSGTSTAT---AAPAGGFGG-------FGTTTTTAGSAFSFSAP 44

---

>NU153_RAT (P49791) Nuclear pore complex protein Nup153 (Nucleoporin Nup153)|
            (153 kDa nucleoporin)
          Length = 1468

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
 Frame = +3

Query: 141  FGQSSASA----FGQTSSNPFGAQSGFGQ-TSTATN--PFGSPTTAFGAQTGTTS---PF 290
            FG  S+S+    FGQ  S     QS FG  T+ A++   FGS TT F       S    F
Sbjct: 1356 FGTVSSSSQPPVFGQQPS-----QSAFGSGTANASSVFQFGSSTTNFNFTNNNPSGVFTF 1410

Query: 291  GATSSTAGAFGQPS 332
            GA+ ST  A  QPS
Sbjct: 1411 GASPSTPAAAAQPS 1424



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
 Frame = +3

Query: 144  GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFG---ATSSTAG 314
            G+ + ++   +++ PF   +G    ST ++ F    T   + +G+   FG   +  S + 
Sbjct: 1251 GKPATTSSTASAAPPFVFGTGASSNSTVSSGFTFGATTTSSSSGSFFVFGTGHSAPSASP 1310

Query: 315  AFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
            AFG    P                   QP+ P+FG+ SSS
Sbjct: 1311 AFGANQTPTFGQSQGAS----------QPNPPSFGSISSS 1340

---

>EP15R_MOUSE (Q60902) Epidermal growth factor receptor substrate 15-like 1|
           (Eps15-related protein) (Eps15R) (Epidermal growth
           factor receptor pathway substrate 15-related sequence)
           (Eps15-rs)
          Length = 907

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 24/72 (33%), Positives = 34/72 (47%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 302
           F S++PF  SS S+ G   S+PFG    FG +S ++    +   A  +Q     P G  S
Sbjct: 703 FESSDPFSSSSISSKG---SDPFGTLDPFGSSSFSS----AEGFADFSQMSKPPPSGPFS 755

Query: 303 STAGAFGQPSAP 338
           S+ G  G    P
Sbjct: 756 SSLGGTGFSDDP 767

---

>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9|
          Length = 3178

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 20/63 (31%), Positives = 31/63 (49%)
 Frame = +3

Query: 126  GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 305
            G T   G ++  + G    +     SG GQ+ST +   GS TTA G+ +G +S  G+   
Sbjct: 1118 GGTGSGGSATTLSTGDAVRSTTSG-SGSGQSSTGSGAGGSGTTASGSGSGGSSGTGSDGV 1176

Query: 306  TAG 314
             +G
Sbjct: 1177 NSG 1179



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 22/105 (20%), Positives = 39/105 (37%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 308
           +T+P      S    +SS+     +     ST+T+P  + TT+      TT+P  +T+  
Sbjct: 450 TTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTS------TTAPSTSTTGP 503

Query: 309 AGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSPFG 443
           + +   PS+                    Q ST      ++S  G
Sbjct: 504 SSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTKSETTTSSDG 548



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
 Frame = +3

Query: 216 TSTATNPFGSPTTAFGAQTGTTSPFGAT-SSTAGAFGQPSAPXXXXXXXXXXXXXXXXXX 392
           TSTA+     P+T+    + +TSP  +T +S++ +    + P                  
Sbjct: 434 TSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTST 493

Query: 393 XQPSTPAFGTPSSS 434
             PST   G  SSS
Sbjct: 494 TAPSTSTTGPSSSS 507

---

>NUPL2_PONPY (Q5RB98) Nucleoporin-like 2|
          Length = 423

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 12/110 (10%)
 Frame = +3

Query: 141 FGQSSASAF--------GQTSSNP----FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 284
           FG S A+ F          +S N     F   SGF   S+ +      + AFGA   T+S
Sbjct: 220 FGSSQAATFVSPGFPVNNSSSDNAQNFSFKTNSGFAAASSGSPAGFRSSPAFGAAASTSS 279

Query: 285 PFGATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
              +TS+ A  FG+P                       P+  +FG+P  S
Sbjct: 280 AI-STSAPAFGFGKPEV-----------TSAASFSFKSPAASSFGSPGFS 317

---

>NUPL2_HUMAN (O15504) Nucleoporin-like 2 (NLP-1) (hCG1) (NUP42 homolog)|
          Length = 423

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 12/110 (10%)
 Frame = +3

Query: 141 FGQSSASAF--------GQTSSNP----FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 284
           FG S A+ F          +S N     F   SGF   S+ +      + AFGA   T+S
Sbjct: 220 FGSSQAATFMSPGFPVNNSSSDNAQNFSFKTNSGFAAASSGSPAGFGSSPAFGAAASTSS 279

Query: 285 PFGATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
              +TS+ A  FG+P                       P+  +FG+P  S
Sbjct: 280 GI-STSAPAFGFGKPEV-----------TSAASFSFKSPAASSFGSPGFS 317

---

>GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-) (Germline|
           helicase 2)
          Length = 974

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNPFGA----QSGFGQTSTATNPFGSPTTA---FGAQTGTT 281
           FGS NP G    S FG  ++  FG+     +GFG ++   + FG        FG      
Sbjct: 17  FGS-NPSGFGGGSGFGSGNTGGFGSGNAGGTGFGSSNNGGSGFGGNNNVGPRFGNGNAGG 75

Query: 282 SPFGATSSTAGAFGQPSA 335
           + FG+ ++    FG  +A
Sbjct: 76  TGFGSGNAGGTGFGSGNA 93



 Score = 30.4 bits (67), Expect = 2.0
 Identities = 27/72 (37%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
 Frame = +3

Query: 123 FGSTNP----FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSP-TTAFGAQTGTTSP 287
           FGS N     FG   A   G  S    G  +GFG  S + + FGS  T  FG+     S 
Sbjct: 158 FGSGNAGGTGFGSGKAGGTGFGSGKAGG--TGFGGNSNSGSGFGSGLTNGFGSGNNHESG 215

Query: 288 FGATSSTAGAFG 323
           FG   S  G FG
Sbjct: 216 FGGGKS--GGFG 225

---

>K2CB_BOVIN (P04262) Keratin, type II cytoskeletal 68 kDa, component IB|
           (Fragment)
          Length = 166

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
 Frame = +3

Query: 123 FGSTNPFGQ----SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPF 290
           FG  + FG     S +S FG  S + FG  SGF    + ++ FG  ++ FG+ +G  S  
Sbjct: 85  FGGGSGFGGGSGISGSSGFGGGSGSGFGGGSGF----SGSSGFGGGSSGFGSGSGGRSGV 140

Query: 291 GATSSTAGA 317
                ++G+
Sbjct: 141 SGGGLSSGS 149

---

>VGLX_EHV1B (P28968) Glycoprotein X precursor|
          Length = 797

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
 Frame = +3

Query: 150 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS---PFGATSSTAGAF 320
           ++A+    T+S+   A +    T+TA     + TTA      TT+     G+TS+T  + 
Sbjct: 216 TAATTTAATTSSATTAATTTAATTTAATTTAATTTAATTTAATTTGSPTSGSTSTTGAST 275

Query: 321 GQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
             PSA                     P+  +  T + S
Sbjct: 276 STPSASTATSATPTSTSTSAAATTSTPTPTSAATSAES 313



 Score = 30.0 bits (66), Expect = 2.7
 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
 Frame = +3

Query: 150 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA---QTGTTSPFG-ATSSTAGA 317
           SS S  GQ++S+        G T+++++P  SP T   +    T T+SP   +T S++ A
Sbjct: 33  SSTSGSGQSTSS--------GTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTA 84

Query: 318 FGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
               SAP                      T +  TP+++
Sbjct: 85  ATSSSAPSTASSTTSIPTSTSTETTTTTPTASTTTPTTT 123



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 4/106 (3%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT----AFGAQTGTTSPFGA 296
           +T+    S++++   T+S P    +     ST   P  +PTT       A T TTSP   
Sbjct: 283 ATSATPTSTSTSAAATTSTPTPTSAATSAESTTEAPTSTPTTDTTTPSEATTATTSPEST 342

Query: 297 TSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
           T S +      +A                    +PS+    TPS++
Sbjct: 343 TVSASTTSATTTA-FTTESHTSPDSSTGSTSTAEPSSTFTLTPSTA 387

---

>FBSH_MOUSE (Q8R089) Probable fibrosin-1 long transcript protein|
          Length = 378

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
 Frame = +3

Query: 132 TNPFGQSSASAFGQTSSNPF----GAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA- 296
           ++P    +A+     ++NPF    GA   F   ST  +PFG PT+       +   FG  
Sbjct: 47  SHPASLFTATGAVHAAANPFTTAPGAHGPFLSPSTHIDPFGRPTSFASLAALSNGAFGGL 106

Query: 297 ---TSSTAGAFGQPSAP 338
              T +++  F Q  +P
Sbjct: 107 GSPTFNSSAVFAQKESP 123



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/56 (35%), Positives = 27/56 (48%)
 Frame = +3

Query: 168 GQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSA 335
           GQ  S+P    +  G    A NPF   TTA GA      PF + S+    FG+P++
Sbjct: 43  GQELSHPASLFTATGAVHAAANPF---TTAPGAH----GPFLSPSTHIDPFGRPTS 91

---

>TCNA_TRYCR (P23253) Sialidase (EC 3.2.1.18) (Neuraminidase) (NA) (Major surface|
            antigen)
          Length = 1162

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 24/102 (23%), Positives = 37/102 (36%)
 Frame = +3

Query: 132  TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA 311
            + P   + +SA G  S+    +  G   T   ++   +P+T   +   +T    A SS  
Sbjct: 910  STPSTPADSSAHGTPSTPVDSSAHGTPSTPADSSAHSTPSTPADSSAHSTPSTPADSS-- 967

Query: 312  GAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
             A   PS P                    PSTPA  +  S+P
Sbjct: 968  -AHSTPSTPVDSSAHSTPSTPADSSAHSTPSTPADSSAHSTP 1008



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 24/102 (23%), Positives = 37/102 (36%)
 Frame = +3

Query: 132  TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA 311
            + P   + +SA G  S+    +      T   ++   +P+T   +   +T    A SS  
Sbjct: 862  STPSTPADSSAHGTPSTPVDSSAHSTPSTPADSSAHSTPSTPVDSSAHSTPSTPADSS-- 919

Query: 312  GAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
             A G PS P                    PSTPA  +  S+P
Sbjct: 920  -AHGTPSTPVDSSAHGTPSTPADSSAHSTPSTPADSSAHSTP 960



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 26/103 (25%), Positives = 38/103 (36%), Gaps = 9/103 (8%)
 Frame = +3

Query: 156 ASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTT-------SPFGATSSTA- 311
           +SA G  S+    +  G   T   ++   +P+T   +   +T       S  GA S+ A 
Sbjct: 642 SSAHGTPSTPADSSAHGTPSTPVDSSAHSTPSTPVDSSAHSTPSTPVDSSAHGAPSTPAD 701

Query: 312 -GAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
             A G PS P                    PSTPA  +  S+P
Sbjct: 702 SSAHGTPSTPVDSSAHGTPSTPADSSAHSTPSTPADSSAHSTP 744



 Score = 30.4 bits (67), Expect = 2.0
 Identities = 24/102 (23%), Positives = 36/102 (35%)
 Frame = +3

Query: 132  TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA 311
            + P     +SA    S+    +  G   T   ++   +P+T   +   +T    A SS  
Sbjct: 1018 STPSTPVDSSAHSTPSTPADSSAHGTPSTPADSSAHSTPSTPVDSSAHSTPSTPADSS-- 1075

Query: 312  GAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
             A G PS P                    PSTPA  +  S+P
Sbjct: 1076 -AHGTPSTPADSSAHSTPSTPADSSAHGTPSTPADSSAHSTP 1116



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 24/102 (23%), Positives = 36/102 (35%)
 Frame = +3

Query: 132  TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA 311
            + P     +SA G  S+    +      T   ++  G+P+T   +   +T    A SS  
Sbjct: 802  STPSTPVDSSAHGTPSTPVDSSAHSTPSTPVDSSAHGTPSTPVDSSAHSTPSTPADSS-- 859

Query: 312  GAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
             A   PS P                    PSTPA  +  S+P
Sbjct: 860  -AHSTPSTPADSSAHGTPSTPVDSSAHSTPSTPADSSAHSTP 900



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 23/102 (22%), Positives = 36/102 (35%)
 Frame = +3

Query: 132  TNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTA 311
            + P   + +SA    S+    +      T   ++  G+P+T   +   +T    A SS  
Sbjct: 730  STPSTPADSSAHSTPSTPADSSAHSTPSTPVDSSAHGTPSTPADSSAHSTPSTPADSS-- 787

Query: 312  GAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
             A G PS P                    PSTP   +  S+P
Sbjct: 788  -AHGTPSTPVDSSAHSTPSTPVDSSAHGTPSTPVDSSAHSTP 828



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 25/108 (23%), Positives = 38/108 (35%), Gaps = 2/108 (1%)
 Frame = +3

Query: 120 MFGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 299
           + G+      SS S+   T S P  + +     ST + P  S   +  +    +S  G  
Sbjct: 581 LIGTEAHMDSSSDSSAHSTPSTPADSSAH----STPSTPVDSSAHSTPSTPADSSAHGTP 636

Query: 300 SST--AGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
           S+   + A G PS P                    PSTP   +  S+P
Sbjct: 637 STPVDSSAHGTPSTPADSSAHGTPSTPVDSSAHSTPSTPVDSSAHSTP 684



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
 Frame = +3

Query: 216 TSTATNPFGSPTT-AFGAQTGTTSPFGATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXX 392
           T   ++  G+P+T A  +  GT S    T   + A G PS P                  
Sbjct: 686 TPVDSSAHGAPSTPADSSAHGTPS----TPVDSSAHGTPSTPADSSAHSTPSTPADSSAH 741

Query: 393 XQPSTPAFGTPSSSP 437
             PSTPA  +  S+P
Sbjct: 742 STPSTPADSSAHSTP 756

---

>SEC9_DEBHA (Q6BKU3) Protein transport protein SEC9|
          Length = 490

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSG---FGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 299
           +TNP+G  S  A     +   GA S     G  +T TNP+G    +  A     +P+G  
Sbjct: 100 TTNPYGSRSERANNPYGNGNVGASSRGERAGGRNTQTNPYGGARASGRASGSKPNPYGGV 159

Query: 300 SS 305
            +
Sbjct: 160 QN 161

---

>VLPC_MYCHR (P29230) Variant surface antigen C precursor (VLPC prolipoprotein)|
          Length = 160

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 23/88 (26%), Positives = 34/88 (38%)
 Frame = +3

Query: 174 TSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPSAPXXXXX 353
           + S+  G QSG    +T     GS T+  G Q+GTTS  G T+        P +P     
Sbjct: 43  SGSSTSGDQSG----TTTGGHSGSGTSTSGGQSGTTSGSGTTTGEQTETA-PKSPESGSQ 97

Query: 354 XXXXXXXXXXXXXXQPSTPAFGTPSSSP 437
                          P +P  G+  ++P
Sbjct: 98  EATPKSPESGSQEATPKSPESGSQEAAP 125

---

>FBSH_HUMAN (Q9HAH7) Probable fibrosin-1 long transcript protein|
          Length = 372

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
 Frame = +3

Query: 132 TNPFGQSSASAFGQTSSNPF----GAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA- 296
           ++P    +A+     ++NPF    GA   F   ST  +PFG PT+       +   FG  
Sbjct: 47  SHPASLFTATGAVHAAANPFTAAPGAHGPFLSPSTHIDPFGRPTSFASLAALSNGAFGGL 106

Query: 297 ---TSSTAGAFGQPSAP 338
              T ++   F Q  +P
Sbjct: 107 GSPTFNSGAVFAQKESP 123

---

>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)|
          Length = 662

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 23/100 (23%), Positives = 37/100 (37%), Gaps = 5/100 (5%)
 Frame = +3

Query: 150 SSASAFGQTSSNPFGAQSGFG--QTSTATNPFGSPTTAFGAQTG---TTSPFGATSSTAG 314
           ++A+A   T  +   A  G    + + A     +P TA  A TG   TT+   A + T  
Sbjct: 3   TTAAAVAATGKDTTAAAEGSAAAEKTAAAGEVSAPPTAAVAATGEDATTAAATAAAETTA 62

Query: 315 AFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
           A G+                        P+T A G P+++
Sbjct: 63  AAGEAPTTTTAPATTAAGKAPTTAAATAPTTAAAGAPTTA 102

---

>SP96_DICDI (P14328) Spore coat protein SP96|
          Length = 600

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 19/88 (21%), Positives = 34/88 (38%)
 Frame = +3

Query: 150 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 329
           SSAS     SS+P  + +    +S+A +   S + A  + + + S   + SS+A +   P
Sbjct: 448 SSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAP 507

Query: 330 SAPXXXXXXXXXXXXXXXXXXXQPSTPA 413
           S+                      S+ A
Sbjct: 508 SSSASSSSAPSSSASSSSASSSSASSAA 535

---

>MSA2_PLAF1 (P50496) Merozoite surface antigen 2 precursor (MSA-2)|
          Length = 286

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = +3

Query: 150 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 329
           + A A G   S    + S  G  S + +       A G+ +G+    G+ S +AGA G P
Sbjct: 54  AGAGASGSAGSGDGASGSASGSASGSAS---GSAGASGSASGSAGASGSASGSAGAEGSP 110

Query: 330 SAP 338
           S P
Sbjct: 111 STP 113

---

>MCM3A_HUMAN (O60318) 80 kda MCM3-associated protein (GANP protein)|
          Length = 1980

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
 Frame = +3

Query: 132 TNPFGQSSASAFGQTSSN----------PFGAQSGFGQTSTATNPFG--SPTTAFGAQTG 275
           TNPF     SAF  +SSN           FG  S FGQ ST +      S  ++F A +G
Sbjct: 4   TNPFSGQQPSAFSASSSNVGTLPSKPPFRFGQPSLFGQNSTLSGKSSGFSQVSSFPASSG 63

Query: 276 TT 281
            +
Sbjct: 64  VS 65

---

>SSB_COREF (Q8FLP9) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 232

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
 Frame = +3

Query: 126 GSTNPFGQSSASAFG----QTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFG 293
           G    FG +    FG        NP G Q GFGQ           T  FG Q G    FG
Sbjct: 125 GGQGGFGGNQGGGFGGQGGNQGGNPGGGQGGFGQN----------TGGFGGQQGNQGGFG 174

---

>YI94_SCHPO (Q9UT55) Protein C806.04c|
          Length = 440

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = -3

Query: 268 CAPKAVVGLPKGLVAVLVWPNPDWAPKG---LLEVCPKA 161
           C    VVGLP GL   +    P W   G   ++E CPKA
Sbjct: 402 CKADVVVGLPDGLYEKIAKDLPHWERTGKYAVVEFCPKA 440

---

>ZN703_HUMAN (Q9H7S9) Zinc finger protein 703|
          Length = 590

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 144 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 296
           G SS S+   +SS+  G ++GF   S A  PF        A + ++SP G+
Sbjct: 171 GSSSVSSTSSSSSSSPGDKAGFRVPSAACPPFPPHGAPVSASSSSSSPGGS 221

---

>GUN1_USTMA (P54424) Endoglucanase 1 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase 1) (Cellulase 1) (EG 1)
          Length = 393

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = +3

Query: 126 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTAT---NPFGSPTTAFGAQTGTTSPFGA 296
           GS +  G + AS  G  +    G   G+GQ S      +  G  TT  G+ +G+ S   A
Sbjct: 283 GSGDASGGADASGAGGAAEGSQGQPEGYGQPSGGNDQGSSNGDATTGAGSGSGSDSGSTA 342

Query: 297 TSSTAGA 317
             S +GA
Sbjct: 343 NGSGSGA 349

---

>ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arabidopsis|
           thaliana envelope membrane integrase) (Ath4)
           (ALBINO3-like protein 1)
          Length = 1013

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +3

Query: 180 SNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQPS 332
           SN  G+ +G   TST+     SP    G+   T    G+  ST G  G PS
Sbjct: 386 SNSGGSGNGTNSTSTSGGGSPSPGGGSGSPPSTGGGSGSPPSTGGGGGSPS 436

---

>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor|
          Length = 866

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
 Frame = +3

Query: 150 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA---QTGTTSPFG-ATSSTAGA 317
           SS S  GQ++S+        G T+++++P  SP T   +    T T+SP   +T S++ A
Sbjct: 33  SSTSGSGQSTSS--------GTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTA 84

Query: 318 FGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
               SAP                      T +  TP+++
Sbjct: 85  ATSSSAPSTASSTTSIPTSTSTETTTTTPTASTTTPTTT 123



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 4/106 (3%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT----AFGAQTGTTSPFGA 296
           +T+    S++++   T+S P    +     ST   P  +PTT       A T TTSP   
Sbjct: 352 ATSATPTSTSTSAAATTSTPTPTSAATSAESTTEAPTSTPTTDTTTPSEATTATTSPEST 411

Query: 297 TSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSSS 434
           T S +      +A                    +PS+    TPS++
Sbjct: 412 TVSASTTSATTTA-FTTESHTSPDSSTGSTSTAEPSSTFTLTPSTA 456

---

>SMBT2_MOUSE (Q5DTW2) Scm-like with four MBT domains protein 2|
          Length = 938

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -3

Query: 277 VPVCAPKAV-VGLPKGLVAVLVWPNPDWAPKGLLEVCPKALAEDCPNG 137
           VP   P+ +  G+P+G+ A +    P+  P+G+ E  P+A+ E  P G
Sbjct: 717 VPAGVPEDIPAGIPEGIPASI----PESIPEGIPESLPEAIPESIPKG 760

---

>EP15_HUMAN (P42566) Epidermal growth factor receptor substrate 15 (Protein|
           Eps15) (AF-1p protein)
          Length = 896

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 25/90 (27%), Positives = 32/90 (35%), Gaps = 20/90 (22%)
 Frame = +3

Query: 123 FGSTNPFG----------------QSSASAFGQTSSNPFGAQSGFGQTSTAT----NPFG 242
           FG  +PFG                + S   F  +S++PF A +    TS  T    +PF 
Sbjct: 636 FGKIDPFGGDPFKGSDPFASDCFFRQSTDPFATSSTDPFSAANNSSITSVETLKHNDPFA 695

Query: 243 SPTTAFGAQTGTTSPFGATSSTAGAFGQPS 332
              T   A    T PF      A  FG  S
Sbjct: 696 PGGTVVAASDSATDPF------ASVFGNES 719

---

>NG79_SCHPO (Q09793) Putative nucleoporin C22G7.09c|
          Length = 425

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 19/62 (30%), Positives = 27/62 (43%)
 Frame = +3

Query: 141 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 320
           FG +   +FG T +      +  G    ++N FG+ T     Q  T +  G    T GAF
Sbjct: 2   FGLNKTPSFGSTGTQNQNTGTSAGTGLFSSNTFGNNT-----QANTPASTGFGGVTGGAF 56

Query: 321 GQ 326
           GQ
Sbjct: 57  GQ 58

---

>PRY1_YEAST (P47032) Protein PRY1 precursor (Pathogen related in Sc 1)|
          Length = 299

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +3

Query: 141 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 317
           +G+++ S    TSS          Q +T + P  + TT+  A T TTS   ATSS + +
Sbjct: 99  WGKTTDSTTTLTSSE--STSQSLAQATTTSTPAAASTTSTPAATTTTSQAAATSSASSS 155

---

>P53_MOUSE (P02340) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 390

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +2

Query: 161 RFWADLQQPFRSPIRV----RPDQHRHQSLRQPDHRLRCADGDHLA 286
           + W     P  S +R     +  QH  + +R+  H  RC+DGD LA
Sbjct: 141 QLWVSATPPAGSRVRAMAIYKKSQHMTEVVRRCPHHERCSDGDGLA 186

---

>HRPA1_XANCV (P80151) Hypersensitivity response secretion protein hrpA1|
           precursor
          Length = 607

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGT----TSPF 290
           FG   P G  S++ FG  +    G  SG           G P++ FG  + +     SP 
Sbjct: 238 FGRVQPIGGGSSNTFGNAAQGQGGGASGI---------LGLPSSWFGGASSSDRVPVSPP 288

Query: 291 GATSSTAGAFGQPSA 335
              S  A A G P++
Sbjct: 289 LPGSGAAAAAGSPAS 303

---

>BYN_DROME (P55965) T-related protein (Trp) (Protein brachyenteron)|
          Length = 697

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 14/116 (12%)
 Frame = +3

Query: 126 GSTNPFGQS-SASAFGQTSSNPFGAQ---SGFGQTSTATNPFGS----------PTTAFG 263
           GS + +G+S S+ +   T + P+      SG G   +A N   +          PT+   
Sbjct: 329 GSCDRYGRSLSSRSVAPTRTTPYSRPRVVSGSGSNGSAGNASSTSPQPPSAPQTPTSLHS 388

Query: 264 AQTGTTSPFGATSSTAGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSS 431
             TG+ S    +SS+ G  G  SAP                    P+   F  PSS
Sbjct: 389 TSTGSVST-SVSSSSGGGIG--SAPSTGCFSSSYAQSGFMSVDASPTASVFSYPSS 441

---

>API_ACHLY (P15636) Protease 1 precursor (EC 3.4.21.50) (Protease I) (API)|
           (Lysyl endopeptidase)
          Length = 653

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = +3

Query: 126 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGT---TSPFGA 296
           G T  F  SS  + G  +S  +    G G TSTATNP      A G  T T   T   GA
Sbjct: 487 GLTATFTDSSTDSDGSIASRSWNF--GDGSTSTATNP-SKTYAAAGTYTVTLTVTDNGGA 543

Query: 297 TSSTAGAFGQPSAP 338
           T++  G+      P
Sbjct: 544 TNTKTGSVTVSGGP 557

---

>NUP62_HUMAN (P37198) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)|
          Length = 522

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 14/77 (18%)
 Frame = +3

Query: 150 SSASAFGQTSSNPFGAQSGFGQTSTATNP----FGSPTTAFGAQT----------GTTSP 287
           ++ S FG  SSN   A S    +S  T P    FG  TT+    T           T  P
Sbjct: 109 ANPSGFGLGSSNLTNAISSTVTSSQGTAPTGFVFGPSTTSVAPATTSGGFSFTGGSTAQP 168

Query: 288 FGATSSTAGAFGQPSAP 338
            G    +AG   QP+AP
Sbjct: 169 SGFNIGSAGNSAQPTAP 185

---

>FLGH_PSEPU (Q52081) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 231

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA-QTGTTSPFGATSS 305
           S     +++ S   +TS    G  S FG T    NPFG    +  A  +G  +  G + +
Sbjct: 77  SATSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSGDRATKGDSKA 136

Query: 306 TAG 314
           T G
Sbjct: 137 TQG 139

---

>MUC13_RAT (P97881) Mucin-13 precursor|
          Length = 547

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
 Frame = +3

Query: 126 GSTNPFGQSSASAF------GQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSP 287
           G+T P G +S+         G +S  P G     G  ST T     PT +    +GTT P
Sbjct: 135 GTTQPPGGASSPTTTVTQPTGSSSQTP-GTTQPPGGASTPTTTVTQPTGSSSQTSGTTQP 193

Query: 288 FGATSST 308
            G  SS+
Sbjct: 194 PGGASSS 200



 Score = 29.3 bits (64), Expect = 4.5
 Identities = 22/61 (36%), Positives = 28/61 (45%)
 Frame = +3

Query: 150 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQP 329
           S+AS    T+  P GA S    T+T T P GS +       GTT P G  S+      QP
Sbjct: 128 STASQTPGTTQPPGGASS---PTTTVTQPTGSSSQT----PGTTQPPGGASTPTTTVTQP 180

Query: 330 S 332
           +
Sbjct: 181 T 181

---

>PUM2_HUMAN (Q8TB72) Pumilio homolog 2 (Pumilio-2)|
          Length = 1066

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +3

Query: 123 FGSTNPFGQS-SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGAT 299
           +GS++    S S+S F      P     GFG  ++     GS  + FG+  G+++   AT
Sbjct: 524 YGSSSLTNSSQSSSLFSHGPGQPGSTSLGFGSGNSLGAAIGSALSGFGSSVGSSASSSAT 583

---

>NUP1_YEAST (P20676) Nucleoporin NUP1 (Nuclear pore protein NUP1)|
          Length = 1076

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
 Frame = +3

Query: 180  SNPFGAQSGFGQTSTATNPF-------GSPTTAFGAQTGTTSPFGATSSTAGAFG 323
            S+ FGA +  G  S  TNP        G PTT+FG      +  G  ++   + G
Sbjct: 1005 SDIFGANAASGSNSNVTNPSSIFGGAGGVPTTSFGQPQSAPNQMGMGTNNGMSMG 1059

---

>HMB1_STRPU (P13545) Homeobox protein HB1 (SPHBOX1)|
          Length = 308

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
 Frame = +3

Query: 153 SASAFGQTSSNPFGAQSGFGQTSTATNPFG------SPTTAFGAQTGTTSPFGATSSTAG 314
           +A+ +G  + + F   +G+G  ST +  +G      SPT+A+ ++   T    +  STA 
Sbjct: 69  AATFYGGGTLSNFSTTAGYGDHSTTSAGYGSMSQPISPTSAWDSRMAATYNSASWGSTAA 128

Query: 315 AFGQPS 332
             G  S
Sbjct: 129 ELGDGS 134

---

>HRBL_HUMAN (O95081) HIV-1 Rev-binding protein-like protein (Rev/Rex activation|
           domain-binding protein-related) (RAB-R)
          Length = 481

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 147 QSSASAFGQTSSNPFGAQSGFGQTSTATNPF--GSPTTAFGAQTGTTSPF 290
           Q + S+FG   S   G +        +TNPF  G  ++ F ++  TT+PF
Sbjct: 431 QQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPPTTNPF 480

---

>FLGH_PSEPK (Q88ER9) Flagellar L-ring protein precursor (Basal body L-ring|
           protein)
          Length = 231

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +3

Query: 147 QSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGA-QTGTTSPFGATSSTAG 314
           +++ S   +TS    G  S FG T    NPFG    +  A  +G  +  G + +T G
Sbjct: 83  KNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSGDRATKGDSKATQG 139

---

>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4|
           precursor
          Length = 605

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 21/98 (21%), Positives = 38/98 (38%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 308
           ST+    ++ S    TS+      S    TST+++   +PTT   A   T++   +++ST
Sbjct: 204 STSSSTSTTVSVTSSTSTTTSTTSSTLISTSTSSSSSSTPTTTSSAPISTSTT--SSTST 261

Query: 309 AGAFGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGT 422
           + +   P++                     PST    T
Sbjct: 262 STSTTSPTSSSAPTSSSNTTPTSTTFTTTSPSTAPSST 299



 Score = 28.9 bits (63), Expect = 5.9
 Identities = 22/69 (31%), Positives = 30/69 (43%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 308
           S+ P   SSA     T+S+   + S    TS++     S TT       TTSP  A SST
Sbjct: 240 SSTPTTTSSAPISTSTTSSTSTSTSTTSPTSSSAPTSSSNTTPTSTTFTTTSPSTAPSST 299

Query: 309 AGAFGQPSA 335
              +   +A
Sbjct: 300 TVTYTSTTA 308

---

>K2C6C_HUMAN (P48666) Keratin, type II cytoskeletal 6C (Cytokeratin-6C) (CK 6C)|
           (K6c keratin)
          Length = 563

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
 Frame = +3

Query: 141 FGQSSASAFGQTSSNPFGAQS-----GFGQTSTATNPFGSPTTAFGAQTGTTSPF--GAT 299
           FG  S    G +     G  S     G+G  + A+  FG   + FG   G    F  G  
Sbjct: 55  FGSRSLYGLGGSKRISIGGGSCAISGGYGSRARASYGFGGAGSGFGFGGGAGIGFDLGGG 114

Query: 300 SSTAGAFGQPSAP 338
           +  AG FG P  P
Sbjct: 115 AGLAGGFGGPGFP 127

---

>EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 15 (Protein|
           Eps15) (AF-1p protein)
          Length = 897

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 21/63 (33%), Positives = 30/63 (47%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATS 302
           FG  +PFG           S+PF +   F QTST  +PF          T +T PF A+S
Sbjct: 636 FGKIDPFGGDPFKG-----SDPFASDCFFKQTST--DPF---------TTSSTDPFSASS 679

Query: 303 STA 311
           +++
Sbjct: 680 NSS 682

---

>EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate 15-like 1|
           (Eps15-related protein) (Eps15R)
          Length = 864

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
 Frame = +3

Query: 123 FGSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFG----AQTGTTSPF 290
           F S++PF  SS S+ G   S+PFG    FG         GS  +A G    +Q     P 
Sbjct: 705 FESSDPFSSSSVSSKG---SDPFGTLDPFGS--------GSFNSAEGFADFSQMSKPPPS 753

Query: 291 GATSSTAGAFGQPSAP 338
           G  +S+ G  G    P
Sbjct: 754 GPFTSSLGGAGFSDDP 769

---

>PYRD_HALMA (Q5UYF1) Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate|
           oxidase) (DHOdehase) (DHODase) (DHOD)
          Length = 350

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +3

Query: 153 SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 284
           +  AFG T  NP G  +GF + +T      S    F    G T+
Sbjct: 51  AVEAFGHTFDNPVGVAAGFDKNATIPETLASLGFGFAEVGGVTA 94

---

>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)|
           (Tracheobronchial mucin) (TBM) (Major airway
           glycoprotein) (Fragment)
          Length = 1233

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 25/98 (25%), Positives = 33/98 (33%)
 Frame = +3

Query: 138 PFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGA 317
           P   ++++    T+S P    S    TST + P  S T+A  A T  TS  G T S    
Sbjct: 40  PTTSTTSAPTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSASTAST--TSGPGTTPSPVPT 97

Query: 318 FGQPSAPXXXXXXXXXXXXXXXXXXXQPSTPAFGTPSS 431
               SAP                       P   T S+
Sbjct: 98  TSTTSAPTTSTTSASTASTTSGPGTSLSPVPTTSTTSA 135

---

>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi|
          Length = 700

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSST 308
           ST+  G SS S+   +   P    +  G T + +NP  + +      TG+ +P GA +  
Sbjct: 238 STSTNGNSSTSS---SVEQPTSGLTPAGGTVSTSNPDAAASGGASTATGSKAPSGAVTIR 294

Query: 309 AGAFG 323
            GA G
Sbjct: 295 VGAQG 299

---

>PUM1_HUMAN (Q14671) Pumilio homolog 1 (Pumilio-1) (HsPUM)|
          Length = 1186

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +3

Query: 129 STNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 284
           S N   QSS S F Q S+ P     GFG +S+     GS    FG     ++
Sbjct: 650 SLNSNSQSS-SLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSN 700

---

>PHXR5_MOUSE (P08399) Per-hexamer repeat protein 5|
          Length = 672

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
 Frame = +3

Query: 126 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQ---TSTATNPFGSPTTAFGAQTGTTSPFGA 296
           G+ +  G  + +  G  S    G  SG G    T TAT       T  G  TGT +  G+
Sbjct: 328 GTGSGSGTGTGTGTGSGSGTGTGTGSGSGTAKVTGTATGTGTGTDTGTGTGTGTGTGTGS 387

Query: 297 TSSTAGAFG 323
            S TA   G
Sbjct: 388 GSGTAKVTG 396

---

>CYSP4_DICDI (P54639) Cysteine proteinase 4 precursor (EC 3.4.22.-)|
          Length = 442

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +3

Query: 144 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG 275
           GQS+ S  GQTS++   + SG G  S + +  GS + A  A +G
Sbjct: 356 GQSTGSQSGQTSASGQASASGSGSGSGSGSGSGSGSGAVEASSG 399



 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 126 GSTNPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTG 275
           G T+  GQ+SAS  G  S +  G+ SG G    ++  +     ++G   G
Sbjct: 364 GQTSASGQASASGSGSGSGSGSGSGSGSGAVEASSGNYWIVKNSWGTSWG 413

---

>P53_MACMU (P56424) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 393

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +2

Query: 161 RFWADLQQPFRSPIRV----RPDQHRHQSLRQPDHRLRCADGDHLA 286
           + W D   P  S +R     +  QH  + +R+  H  RC+D D LA
Sbjct: 144 QLWVDSTPPPGSRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLA 189

---

>P53_MACFU (P61260) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 393

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +2

Query: 161 RFWADLQQPFRSPIRV----RPDQHRHQSLRQPDHRLRCADGDHLA 286
           + W D   P  S +R     +  QH  + +R+  H  RC+D D LA
Sbjct: 144 QLWVDSTPPPGSRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLA 189

---

>P53_MACFA (P56423) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 393

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +2

Query: 161 RFWADLQQPFRSPIRV----RPDQHRHQSLRQPDHRLRCADGDHLA 286
           + W D   P  S +R     +  QH  + +R+  H  RC+D D LA
Sbjct: 144 QLWVDSTPPPGSRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLA 189

---

>P53_CERAE (P13481) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 393

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +2

Query: 161 RFWADLQQPFRSPIRV----RPDQHRHQSLRQPDHRLRCADGDHLA 286
           + W D   P  S +R     +  QH  + +R+  H  RC+D D LA
Sbjct: 144 QLWVDSTPPPGSRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLA 189

---

>DPOL_ASFL6 (P43139) DNA polymerase (EC 2.7.7.7)|
          Length = 1244

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 135  NPFGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTT 254
            NP G  + +  G  + NP G  +G    + A NP G+P +
Sbjct: 1083 NPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAGNPAS 1122

---

>SSB_BACAN (Q81JI3) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 172

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +3

Query: 147 QSSASAFGQTSSNPFGAQSGFGQTSTATN 233
           Q S + FG  SSNPFG  S  G      N
Sbjct: 118 QPSGAGFGNQSSNPFGQSSNSGNQGNQGN 146

---

>DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)|
           (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD
           box protein p72)
          Length = 650

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = +3

Query: 147 QSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFGQ 326
           + SAS   ++ ++  G  +G G        +GSP +AFGAQ G  + +G  +  A A+G 
Sbjct: 518 RDSASYRDRSETDRAGYANGSG--------YGSPNSAFGAQAGQYT-YGQGTYGAAAYGT 568

Query: 327 PS 332
            S
Sbjct: 569 SS 570

---

>MUCSM_CANFA (P83762) Submaxillary mucin (CSM) (Fragment)|
          Length = 89

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/64 (32%), Positives = 27/64 (42%)
 Frame = +3

Query: 144 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 323
           G  +ASA G T     G  +  G  ST  +  G+P T    + GTT    +  S  G  G
Sbjct: 24  GSPTASARGGTPGGSEGFTAAPGSESTGGHS-GAPGTTLAGRAGTTLGPRSEPSGTGVGG 82

Query: 324 QPSA 335
            P A
Sbjct: 83  SPVA 86

---

>K1C3_XENLA (P05782) Keratin, type I cytoskeletal 47 kDa (Fragment)|
          Length = 280

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = +3

Query: 144 GQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAFG 323
           G    S++G  SS+ FG   G G        FG     +GA  G  +  G +SS++G FG
Sbjct: 19  GGGFGSSYGGGSSSSFGGGYGAG--------FGG---GYGAGFGGGASSGFSSSSSGGFG 67

Query: 324 QPSA 335
             +A
Sbjct: 68  AAAA 71

---

>ILF3_MOUSE (Q9Z1X4) Interleukin enhancer-binding factor 3|
          Length = 898

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = +3

Query: 123  FGSTNPFGQSSASAFGQTSSNPF--GAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGA 296
            F  +   G+S  +++G + S+ +  G+  G+G  S  ++ +      + +Q+  +SP G+
Sbjct: 809  FNYSGSGGRSGGNSYGSSGSSSYNTGSHGGYGTGSGGSSSYQGKQGGYSSQSNYSSP-GS 867

Query: 297  TSSTAG 314
            + S +G
Sbjct: 868  SQSYSG 873

---

>PUM1_MOUSE (Q80U78) Pumilio homolog 1|
          Length = 1189

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +3

Query: 153 SASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTS 284
           S+S F Q S+ P     GFG +S+     GS    FG     ++
Sbjct: 658 SSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSN 701

---

>P2RX1_MOUSE (P51576) P2X purinoceptor 1 (ATP receptor) (P2X1) (Purinergic|
           receptor)
          Length = 399

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/61 (31%), Positives = 24/61 (39%)
 Frame = +3

Query: 141 FGQSSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 320
           F  +   A G  + NP G   G  Q  +   P  +   A G +TG   PF  T  T   F
Sbjct: 106 FIMTPQQAQGHCAENPEG---GICQDDSGCTPGKAERKAQGIRTGNCVPFNGTVKTCEIF 162

Query: 321 G 323
           G
Sbjct: 163 G 163

---

>KAPR_TRIAT (Q86ZN7) cAMP-dependent protein kinase regulatory subunit (PKA|
           regulatory subunit)
          Length = 462

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 165 FGQTSSNP-FGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 305
           F  + +NP FG  S     S  ++PFG+    FG  +   +PFG ++S
Sbjct: 59  FPPSPTNPHFGMMS-----SQFSSPFGANANPFGGSSSNPNPFGGSAS 101

---

>CPO_DROME (Q01617) Protein couch potato|
          Length = 738

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +3

Query: 150 SSASAFGQTSSNPFGAQSGFGQTSTATNPFGSPTTAFGAQTGTTSPFGATSS 305
           +SA+A   T+ +P G+ +    T+TAT        A  A TGT +    + S
Sbjct: 354 NSATASAPTTPSPAGSVTSAAPTATATAAAAGSAAATAAATGTPATSAVSDS 405

---

>MUCS_BOVIN (P98091) Submaxillary mucin-like protein|
          Length = 563

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 216 TSTATNPFGSPTTAFGAQTGTTSPFGATSSTAGAF 320
           T T T+   S  T  G QTG T     T+S+ G F
Sbjct: 176 TETTTSRHSSDATGSGIQTGITGTGSGTTSSPGGF 210


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,465,602
Number of Sequences: 219361
Number of extensions: 885874
Number of successful extensions: 3549
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 2777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3306
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)

---