ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl55g03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
3emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa... 58 3e-05
4ref|XM_506270.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.38
5ref|XM_477569.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.38
6gb|AC007418.9| Drosophila melanogaster clone BACR16P22, complete... 44 0.38
7gb|AC009208.6| Drosophila melanogaster clone BACR31I21, complete... 44 0.38
8ref|NM_206086.1| Drosophila melanogaster pipsqueak CG2368-RC, tr... 44 0.38
9ref|NM_176143.1| Drosophila melanogaster pipsqueak CG2368-RH, tr... 44 0.38
10ref|NM_176142.1| Drosophila melanogaster pipsqueak CG2368-RG, tr... 44 0.38
11ref|NM_176141.1| Drosophila melanogaster pipsqueak CG2368-RF, tr... 44 0.38
12ref|NM_165792.1| Drosophila melanogaster pipsqueak CG2368-RE, tr... 44 0.38
13ref|NM_165791.1| Drosophila melanogaster pipsqueak CG2368-RD, tr... 44 0.38
14ref|NM_165790.1| Drosophila melanogaster pipsqueak CG2368-RA, tr... 44 0.38
15ref|NM_078962.2| Drosophila melanogaster pipsqueak CG2368-RB, tr... 44 0.38
16ref|NM_001014520.1| Drosophila melanogaster pipsqueak CG2368-RI,... 44 0.38
17ref|NM_001014519.1| Drosophila melanogaster pipsqueak CG2368-RJ,... 44 0.38
18ref|NM_001014518.1| Drosophila melanogaster pipsqueak CG2368-RK,... 44 0.38
19ref|NM_001014517.1| Drosophila melanogaster pipsqueak CG2368-RL,... 44 0.38
20gb|AE009919.1|AE009919 Pyrobaculum aerophilum strain IM2 section... 44 0.38
21gb|AY069588.1| Drosophila melanogaster LD33470 full length cDNA 44 0.38
22dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
23dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.38
24dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
25dbj|AP006479.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
26dbj|AK073103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.38
27dbj|AK060569.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.38
28gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21... 44 0.38
29gb|U48402.1|DMU48402 Drosophila melanogaster pipsqueak (psq) mRN... 44 0.38
30gb|U48358.1|DMU48358 Drosophila melanogaster pipsqueak (psq) mRN... 44 0.38
31emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 44 0.38
32gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 gen... 42 1.5
33dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
34dbj|AK071551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
35gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
36ref|NM_190668.1| Oryza sativa (japonica cultivar-group), predic... 40 6.0
37ref|XM_429190.1| PREDICTED: Gallus gallus similar to PHD finger ... 40 6.0
38gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
39gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.0
40ref|XM_756260.1| Ustilago maydis 521 hypothetical protein (UM052... 40 6.0
41gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.0
42ref|XM_778123.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.0
43gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig co... 40 6.0
44gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 6.0
45gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswel... 40 6.0
46gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell... 40 6.0
47gb|AF305543.1|AF305543 Chlamydomonas reinhardtii cytochrome c ox... 40 6.0
48dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
49dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
50dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
51dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
52gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.0
53dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
54dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
55gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Can... 40 6.0
56dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
57dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
58gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44... 40 6.0
59gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
60gb|U02620.1|GME75A Galleria mellonella ecdysteroid-induced (E75)... 40 6.0 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                           
Query: 352     catccaccccggcgtttggggccgcgccggctggtggatttggccagccatccacgccgg 411
               ||||||||||||||||||| ||  || | ||||| |  || |||||||||||||| ||||
Sbjct: 3346680 catccaccccggcgtttggcgcgacgtccgctggggccttcggccagccatccactccgg 3346739

                                        
Query: 412     cgttcggcaccccgtcgtcctctcc 436
               |||| ||||| || || ||||||||
Sbjct: 3346740 cgtttggcactccatcatcctctcc 3346764



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                           
Query: 144     gggcagtcttccgccagcgcttttgggcagacctccagcaaccctttcggagcccaatca 203
               |||||||| ||| | ||| |||| || |||||||| ||||||||||| || |||||  ||
Sbjct: 3346439 gggcagtcgtccactagccctttcggccagacctcaagcaacccttttggggcccagaca 3346498

                                          
Query: 204     gggttcggccagaccagcaccgccacc 230
               || || |||||| |||||||| |||||
Sbjct: 3346499 ggatttggccaggccagcacctccacc 3346525



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                              
Query: 390     tttggccagccatccacgccggcgttcggcaccccgtcgtcctctcc 436
               ||||||||||||||||| | |||||| ||||| ||||| ||||||||
Sbjct: 3338112 tttggccagccatccactcaggcgtttggcactccgtcatcctctcc 3338158



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 163     cttttgggcagacctccagcaaccctttcgg 193
               |||||||||||||||| |||||||| |||||
Sbjct: 3337801 cttttgggcagacctcaagcaacccattcgg 3337831



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 390     tttggccagccatccacgccggcgtt 415
               ||||||||||||||||| ||||||||
Sbjct: 3346670 tttggccagccatccaccccggcgtt 3346695



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 318     tttggtcagccatccgctccggcgtt 343
               ||||| ||||||||||||||||||||
Sbjct: 3338064 tttggccagccatccgctccggcgtt 3338089



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 318     tttggtcagccatccgctccggcgtt 343
               ||||| ||||||||||||||||||||
Sbjct: 3338016 tttggccagccatccgctccggcgtt 3338041
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                           
Query: 352     catccaccccggcgtttggggccgcgccggctggtggatttggccagccatccacgccgg 411
               ||||||||||||||||||| ||  || | ||||| |  || |||||||||||||| ||||
Sbjct: 3346625 catccaccccggcgtttggcgcgacgtccgctggggccttcggccagccatccactccgg 3346684

                                        
Query: 412     cgttcggcaccccgtcgtcctctcc 436
               |||| ||||| || || ||||||||
Sbjct: 3346685 cgtttggcactccatcatcctctcc 3346709



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                           
Query: 144     gggcagtcttccgccagcgcttttgggcagacctccagcaaccctttcggagcccaatca 203
               |||||||| ||| | ||| |||| || |||||||| ||||||||||| || |||||  ||
Sbjct: 3346384 gggcagtcgtccactagccctttcggccagacctcaagcaacccttttggggcccagaca 3346443

                                          
Query: 204     gggttcggccagaccagcaccgccacc 230
               || || |||||| |||||||| |||||
Sbjct: 3346444 ggatttggccaggccagcacctccacc 3346470



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                              
Query: 390     tttggccagccatccacgccggcgttcggcaccccgtcgtcctctcc 436
               ||||||||||||||||| | |||||| ||||| ||||| ||||||||
Sbjct: 3338057 tttggccagccatccactcaggcgtttggcactccgtcatcctctcc 3338103



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 163     cttttgggcagacctccagcaaccctttcgg 193
               |||||||||||||||| |||||||| |||||
Sbjct: 3337746 cttttgggcagacctcaagcaacccattcgg 3337776



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 390     tttggccagccatccacgccggcgtt 415
               ||||||||||||||||| ||||||||
Sbjct: 3346615 tttggccagccatccaccccggcgtt 3346640



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 318     tttggtcagccatccgctccggcgtt 343
               ||||| ||||||||||||||||||||
Sbjct: 3338009 tttggccagccatccgctccggcgtt 3338034



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 318     tttggtcagccatccgctccggcgtt 343
               ||||| ||||||||||||||||||||
Sbjct: 3337961 tttggccagccatccgctccggcgtt 3337986
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>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137936

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                         
Query: 352   catccaccccggcgtttggggccgcgccggctggtggatttggccagccatccacgccgg 411
             ||||||||||||||||||| ||  || | ||||| |  || |||||||||||||| ||||
Sbjct: 25733 catccaccccggcgtttggcgcgacgtccgctggggccttcggccagccatccactccgg 25792

                                      
Query: 412   cgttcggcaccccgtcgtcctctcc 436
             |||| ||||| || || ||||||||
Sbjct: 25793 cgtttggcactccatcatcctctcc 25817



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                         
Query: 144   gggcagtcttccgccagcgcttttgggcagacctccagcaaccctttcggagcccaatca 203
             |||||||| ||| | ||| |||| || |||||||| ||||||||||| || |||||  ||
Sbjct: 25492 gggcagtcgtccactagccctttcggccagacctcaagcaacccttttggggcccagaca 25551

                                        
Query: 204   gggttcggccagaccagcaccgccacc 230
             || || |||||| |||||||| |||||
Sbjct: 25552 ggatttggccaggccagcacctccacc 25578



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 390   tttggccagccatccacgccggcgttcggcaccccgtcgtcctctcc 436
             ||||||||||||||||| | |||||| ||||| ||||| ||||||||
Sbjct: 17165 tttggccagccatccactcaggcgtttggcactccgtcatcctctcc 17211



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 163   cttttgggcagacctccagcaaccctttcgg 193
             |||||||||||||||| |||||||| |||||
Sbjct: 16854 cttttgggcagacctcaagcaacccattcgg 16884



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 390   tttggccagccatccacgccggcgtt 415
             ||||||||||||||||| ||||||||
Sbjct: 25723 tttggccagccatccaccccggcgtt 25748



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 318   tttggtcagccatccgctccggcgtt 343
             ||||| ||||||||||||||||||||
Sbjct: 17117 tttggccagccatccgctccggcgtt 17142



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 318   tttggtcagccatccgctccggcgtt 343
             ||||| ||||||||||||||||||||
Sbjct: 17069 tttggccagccatccgctccggcgtt 17094
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>ref|XM_506270.1| PREDICTED Oryza sativa (japonica cultivar-group), B1120F06.107 mRNA
          Length = 1733

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 402 tccacgccggcgttcggcaccccgtcgtcc 431
           |||||||||||||||||| | |||||||||
Sbjct: 183 tccacgccggcgttcggcgcgccgtcgtcc 212
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>ref|XM_477569.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1662

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 402 tccacgccggcgttcggcaccccgtcgtcc 431
           |||||||||||||||||| | |||||||||
Sbjct: 217 tccacgccggcgttcggcgcgccgtcgtcc 246
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>gb|AC007418.9| Drosophila melanogaster clone BACR16P22, complete sequence
          Length = 179325

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 295    ccacctcctccaccgccggtgc 316
              ||||||||||||||||||||||
Sbjct: 171635 ccacctcctccaccgccggtgc 171614
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>gb|AC009208.6| Drosophila melanogaster clone BACR31I21, complete sequence
          Length = 152443

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 295    ccacctcctccaccgccggtgc 316
              ||||||||||||||||||||||
Sbjct: 103814 ccacctcctccaccgccggtgc 103793
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>ref|NM_206086.1| Drosophila melanogaster pipsqueak CG2368-RC, transcript variant C
            (psq), mRNA
          Length = 5090

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  ccacctcctccaccgccggtgc 316
            ||||||||||||||||||||||
Sbjct: 3729 ccacctcctccaccgccggtgc 3708
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>ref|NM_176143.1| Drosophila melanogaster pipsqueak CG2368-RH, transcript variant H
            (psq), mRNA
          Length = 4549

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  ccacctcctccaccgccggtgc 316
            ||||||||||||||||||||||
Sbjct: 3188 ccacctcctccaccgccggtgc 3167
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>ref|NM_176142.1| Drosophila melanogaster pipsqueak CG2368-RG, transcript variant G
            (psq), mRNA
          Length = 4515

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  ccacctcctccaccgccggtgc 316
            ||||||||||||||||||||||
Sbjct: 3154 ccacctcctccaccgccggtgc 3133
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>ref|NM_176141.1| Drosophila melanogaster pipsqueak CG2368-RF, transcript variant F
            (psq), mRNA
          Length = 4782

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  ccacctcctccaccgccggtgc 316
            ||||||||||||||||||||||
Sbjct: 3421 ccacctcctccaccgccggtgc 3400
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>ref|NM_165792.1| Drosophila melanogaster pipsqueak CG2368-RE, transcript variant E
            (psq), mRNA
          Length = 4642

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  ccacctcctccaccgccggtgc 316
            ||||||||||||||||||||||
Sbjct: 3281 ccacctcctccaccgccggtgc 3260
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>ref|NM_165791.1| Drosophila melanogaster pipsqueak CG2368-RD, transcript variant D
            (psq), mRNA
          Length = 4724

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  ccacctcctccaccgccggtgc 316
            ||||||||||||||||||||||
Sbjct: 3363 ccacctcctccaccgccggtgc 3342
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>ref|NM_165790.1| Drosophila melanogaster pipsqueak CG2368-RA, transcript variant A
            (psq), mRNA
          Length = 5304

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  ccacctcctccaccgccggtgc 316
            ||||||||||||||||||||||
Sbjct: 3943 ccacctcctccaccgccggtgc 3922
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>ref|NM_078962.2| Drosophila melanogaster pipsqueak CG2368-RB, transcript variant B
            (psq), mRNA
          Length = 5358

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  ccacctcctccaccgccggtgc 316
            ||||||||||||||||||||||
Sbjct: 3997 ccacctcctccaccgccggtgc 3976
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>ref|NM_001014520.1| Drosophila melanogaster pipsqueak CG2368-RI, transcript variant I
            (psq), mRNA
          Length = 5522

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  ccacctcctccaccgccggtgc 316
            ||||||||||||||||||||||
Sbjct: 4161 ccacctcctccaccgccggtgc 4140
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>ref|NM_001014519.1| Drosophila melanogaster pipsqueak CG2368-RJ, transcript variant J
            (psq), mRNA
          Length = 4888

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  ccacctcctccaccgccggtgc 316
            ||||||||||||||||||||||
Sbjct: 3527 ccacctcctccaccgccggtgc 3506
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>ref|NM_001014518.1| Drosophila melanogaster pipsqueak CG2368-RK, transcript variant K
            (psq), mRNA
          Length = 4946

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  ccacctcctccaccgccggtgc 316
            ||||||||||||||||||||||
Sbjct: 3585 ccacctcctccaccgccggtgc 3564
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>ref|NM_001014517.1| Drosophila melanogaster pipsqueak CG2368-RL, transcript variant L
            (psq), mRNA
          Length = 5522

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  ccacctcctccaccgccggtgc 316
            ||||||||||||||||||||||
Sbjct: 4161 ccacctcctccaccgccggtgc 4140
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>gb|AE009919.1|AE009919 Pyrobaculum aerophilum strain IM2 section 174 of 201 of the complete
            genome
          Length = 10746

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 291  ggcgccacctcctccaccgccg 312
            ||||||||||||||||||||||
Sbjct: 3066 ggcgccacctcctccaccgccg 3045
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>gb|AY069588.1| Drosophila melanogaster LD33470 full length cDNA
          Length = 5307

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  ccacctcctccaccgccggtgc 316
            ||||||||||||||||||||||
Sbjct: 3934 ccacctcctccaccgccggtgc 3913
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 402      tccacgccggcgttcggcaccccgtcgtcc 431
                |||||||||||||||||| | |||||||||
Sbjct: 11560373 tccacgccggcgttcggcgcgccgtcgtcc 11560402
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 236     cttcggcagcccgaccaccgcc 257
               ||||||||||||||||||||||
Sbjct: 8383722 cttcggcagcccgaccaccgcc 8383743
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>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1120F06
          Length = 186712

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 402    tccacgccggcgttcggcaccccgtcgtcc 431
              |||||||||||||||||| | |||||||||
Sbjct: 124031 tccacgccggcgttcggcgcgccgtcgtcc 124060
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>dbj|AP006479.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:B1272H04
          Length = 87113

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 402  tccacgccggcgttcggcaccccgtcgtcc 431
            |||||||||||||||||| | |||||||||
Sbjct: 5745 tccacgccggcgttcggcgcgccgtcgtcc 5774
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>dbj|AK073103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024G02, full
           insert sequence
          Length = 1662

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 402 tccacgccggcgttcggcaccccgtcgtcc 431
           |||||||||||||||||| | |||||||||
Sbjct: 217 tccacgccggcgttcggcgcgccgtcgtcc 246
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>dbj|AK060569.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-C01, full
           insert sequence
          Length = 1733

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 402 tccacgccggcgttcggcaccccgtcgtcc 431
           |||||||||||||||||| | |||||||||
Sbjct: 183 tccacgccggcgttcggcgcgccgtcgtcc 212
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>gb|AE003829.4| Drosophila melanogaster chromosome 2R, section 21 of 73 of the complete
              sequence
          Length = 281782

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 295    ccacctcctccaccgccggtgc 316
              ||||||||||||||||||||||
Sbjct: 251279 ccacctcctccaccgccggtgc 251258
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>gb|U48402.1|DMU48402 Drosophila melanogaster pipsqueak (psq) mRNA, alternative ovarian
            transcript psq-2, complete cds
          Length = 4433

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  ccacctcctccaccgccggtgc 316
            ||||||||||||||||||||||
Sbjct: 3063 ccacctcctccaccgccggtgc 3042
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>gb|U48358.1|DMU48358 Drosophila melanogaster pipsqueak (psq) mRNA, primary ovarian
            transcript psq-1, complete cds
          Length = 5162

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 295  ccacctcctccaccgccggtgc 316
            ||||||||||||||||||||||
Sbjct: 3984 ccacctcctccaccgccggtgc 3963
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>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86
          Length = 407339

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 293    cgccacctcctccaccgccggtgcgt 318
              |||||||||| |||||||||||||||
Sbjct: 272319 cgccacctccgccaccgccggtgcgt 272344
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>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete
             sequence
          Length = 146664

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 293   cgccacctcctccaccgccgg 313
             |||||||||||||||||||||
Sbjct: 91177 cgccacctcctccaccgccgg 91197
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 293      cgccacctcctccaccgccgg 313
                |||||||||||||||||||||
Sbjct: 18587366 cgccacctcctccaccgccgg 18587386
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>dbj|AK071551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106C12, full
           insert sequence
          Length = 1512

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 293 cgccacctcctccaccgccgg 313
           |||||||||||||||||||||
Sbjct: 66  cgccacctcctccaccgccgg 86
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 293      cgccacctcctccaccgccgg 313
                |||||||||||||||||||||
Sbjct: 18598219 cgccacctcctccaccgccgg 18598239
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>ref|NM_190668.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1359

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 285 cctttcggcgccacctcctccaccgccg 312
           |||||||||||||||||| || ||||||
Sbjct: 941 cctttcggcgccacctccgccgccgccg 914
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>ref|XM_429190.1| PREDICTED: Gallus gallus similar to PHD finger protein 7 (LOC431638),
            mRNA
          Length = 1806

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 208  tcggccagaccagcaccgcc 227
            ||||||||||||||||||||
Sbjct: 1485 tcggccagaccagcaccgcc 1504
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>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0480H08, complete sequence
          Length = 156301

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   cgccacctcctccaccgccg 312
             ||||||||||||||||||||
Sbjct: 42412 cgccacctcctccaccgccg 42393
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 296      cacctcctccaccgccggtg 315
                ||||||||||||||||||||
Sbjct: 13982633 cacctcctccaccgccggtg 13982652
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>ref|XM_756260.1| Ustilago maydis 521 hypothetical protein (UM05206.1) partial mRNA
          Length = 4086

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 208 tcggccagaccagcaccgccacca 231
           ||||||||||||||||| ||||||
Sbjct: 336 tcggccagaccagcaccaccacca 359
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>gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1057D12,
             from chromosome 3, complete sequence
          Length = 161676

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   cacctcctccaccgccggtg 315
             ||||||||||||||||||||
Sbjct: 28849 cacctcctccaccgccggtg 28830
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>ref|XM_778123.1| PREDICTED: Strongylocentrotus purpuratus similar to Homeobox
           protein Hox-C9a (Hox-C9) (LOC577924), mRNA
          Length = 1038

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 cgccacctcctccaccgccg 312
           ||||||||||||||||||||
Sbjct: 211 cgccacctcctccaccgccg 192
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>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox
              cluster, cholinesterase, and COLP5alpha genes, complete
              sequence
          Length = 796348

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 293    cgccacctcctccaccgccg 312
              ||||||||||||||||||||
Sbjct: 404384 cgccacctcctccaccgccg 404365
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 292     gcgccacctcctccaccgcc 311
               ||||||||||||||||||||
Sbjct: 1942385 gcgccacctcctccaccgcc 1942404
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>gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 167344

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    ccagaccagcaccgccacca 231
              ||||||||||||||||||||
Sbjct: 131359 ccagaccagcaccgccacca 131340
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>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 170988

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   ccagaccagcaccgccacca 231
             ||||||||||||||||||||
Sbjct: 22245 ccagaccagcaccgccacca 22226
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>gb|AF305543.1|AF305543 Chlamydomonas reinhardtii cytochrome c oxidase subunit II (cox2b)
           gene, complete cds; nuclear gene for mitochondrial
           product
          Length = 2877

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 366 tttggggccgcgccggctgg 385
           ||||||||||||||||||||
Sbjct: 239 tttggggccgcgccggctgg 258
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 293      cgccacctcctccaccgccg 312
                ||||||||||||||||||||
Sbjct: 21284940 cgccacctcctccaccgccg 21284921
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 293      cgccacctcctccaccgccg 312
                ||||||||||||||||||||
Sbjct: 26661560 cgccacctcctccaccgccg 26661541
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 296      cacctcctccaccgccggtg 315
                ||||||||||||||||||||
Sbjct: 13977608 cacctcctccaccgccggtg 13977627
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 285      cctttcggcgccacctcctccaccgccg 312
                |||||||||||||||||| || ||||||
Sbjct: 37006126 cctttcggcgccacctccgccgccgccg 37006099
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 276     accacctcgcctttcggcgccacctcct 303
               ||||||||||| |||||||||| |||||
Sbjct: 1537152 accacctcgccgttcggcgccagctcct 1537179
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>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1402_H07
          Length = 140620

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 285   cctttcggcgccacctcctccaccgccg 312
             |||||||||||||||||| || ||||||
Sbjct: 96430 cctttcggcgccacctccgccgccgccg 96403
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>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0683F02
          Length = 153388

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 285  cctttcggcgccacctcctccaccgccg 312
            |||||||||||||||||| || ||||||
Sbjct: 7267 cctttcggcgccacctccgccgccgccg 7240
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>gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167311

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    gatagaggaagaagaaacac 41
             ||||||||||||||||||||
Sbjct: 72941 gatagaggaagaagaaacac 72922
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>dbj|AP005760.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1047G05
          Length = 145431

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   cgccacctcctccaccgccg 312
             ||||||||||||||||||||
Sbjct: 19023 cgccacctcctccaccgccg 19004
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>dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0677B10
          Length = 134423

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   cgccacctcctccaccgccg 312
             ||||||||||||||||||||
Sbjct: 77990 cgccacctcctccaccgccg 77971
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>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete
              sequence
          Length = 265524

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    ccagaccagcaccgccacca 231
              ||||||||||||||||||||
Sbjct: 142397 ccagaccagcaccgccacca 142378
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 293      cgccacctcctccaccgccg 312
                ||||||||||||||||||||
Sbjct: 21595139 cgccacctcctccaccgccg 21595120
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>gb|U02620.1|GME75A Galleria mellonella ecdysteroid-induced (E75) mRNA, complete cds
          Length = 2478

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 293  cgccacctcctccaccgccg 312
            ||||||||||||||||||||
Sbjct: 2264 cgccacctcctccaccgccg 2283


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,381,142
Number of Sequences: 3902068
Number of extensions: 2381142
Number of successful extensions: 57607
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56767
Number of HSP's gapped (non-prelim): 834
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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