ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl55f12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 87.7 bits (44), Expect = 1e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 118 gccgccaagttggcgccgcagcggaggtcgcagcgcctcgccggcggcggcg 169 ||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 20501 gccgccaagttggcgcctcagcgcaggtcgcagcgcctcgccggcggcggcg 20552
>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01, complete sequence Length = 141661 Score = 87.7 bits (44), Expect = 1e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 118 gccgccaagttggcgccgcagcggaggtcgcagcgcctcgccggcggcggcg 169 ||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 130028 gccgccaagttggcgcctcagcgcaggtcgcagcgcctcgccggcggcggcg 130079
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 87.7 bits (44), Expect = 1e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 118 gccgccaagttggcgccgcagcggaggtcgcagcgcctcgccggcggcggcg 169 ||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 3142784 gccgccaagttggcgcctcagcgcaggtcgcagcgcctcgccggcggcggcg 3142835 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 17536450 cgcctcgccggcggcggcg 17536432
>ref|XM_464409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1470 Score = 48.1 bits (24), Expect = 0.009 Identities = 24/24 (100%) Strand = Plus / Minus Query: 146 cgcagcgcctcgccggcggcggcg 169 |||||||||||||||||||||||| Sbjct: 125 cgcagcgcctcgccggcggcggcg 102
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.009 Identities = 24/24 (100%) Strand = Plus / Plus Query: 146 cgcagcgcctcgccggcggcggcg 169 |||||||||||||||||||||||| Sbjct: 5030255 cgcagcgcctcgccggcggcggcg 5030278 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 21150480 cgcctcgccggcggcggcgc 21150499 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatcgccgcgccgacgcggg 88 |||||||||||||||||||| Sbjct: 1932749 gatcgccgcgccgacgcggg 1932730 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 6497543 cgcctcgccggcggcggcg 6497525
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 48.1 bits (24), Expect = 0.009 Identities = 24/24 (100%) Strand = Plus / Plus Query: 146 cgcagcgcctcgccggcggcggcg 169 |||||||||||||||||||||||| Sbjct: 101381 cgcagcgcctcgccggcggcggcg 101404
>ref|XM_549856.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2381 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 150 gcgcctcgccggcggcggcgcg 171 |||||||||||||||||||||| Sbjct: 115 gcgcctcgccggcggcggcgcg 136
>ref|XM_450706.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1230 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Minus Query: 150 gcgcctcgccggcggcggcgcg 171 |||||||||||||||||||||| Sbjct: 1102 gcgcctcgccggcggcggcgcg 1081
>gb|AE005854.1| Caulobacter crescentus CB15 section 180 of 359 of the complete genome Length = 11094 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 cagcgcctcgccggcggcggcg 169 |||||||||||||||||||||| Sbjct: 622 cagcgcctcgccggcggcggcg 643
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Minus Query: 150 gcgcctcgccggcggcggcgcg 171 |||||||||||||||||||||| Sbjct: 12324283 gcgcctcgccggcggcggcgcg 12324262 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gcgcctcgccggcggcggcg 169 |||||||||||||||||||| Sbjct: 18867058 gcgcctcgccggcggcggcg 18867077
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Minus Query: 150 gcgcctcgccggcggcggcgcg 171 |||||||||||||||||||||| Sbjct: 419383 gcgcctcgccggcggcggcgcg 419362 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 147 gcagcgcctcgccggcggcggcg 169 ||||||| ||||||||||||||| Sbjct: 23448190 gcagcgcttcgccggcggcggcg 23448168
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Minus Query: 150 gcgcctcgccggcggcggcgcg 171 |||||||||||||||||||||| Sbjct: 171221 gcgcctcgccggcggcggcgcg 171200
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Minus Query: 150 gcgcctcgccggcggcggcgcg 171 |||||||||||||||||||||| Sbjct: 59584 gcgcctcgccggcggcggcgcg 59563
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Minus Query: 150 gcgcctcgccggcggcggcgcg 171 |||||||||||||||||||||| Sbjct: 107837 gcgcctcgccggcggcggcgcg 107816
>dbj|AK070363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047F20, full insert sequence Length = 2381 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 150 gcgcctcgccggcggcggcgcg 171 |||||||||||||||||||||| Sbjct: 115 gcgcctcgccggcggcggcgcg 136
>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland Research Institute) complete sequence Length = 227955 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 cgccgcagcggaggtcgcagc 151 ||||||||||||||||||||| Sbjct: 115575 cgccgcagcggaggtcgcagc 115595
>ref|NM_010450.1| Mus musculus homeo box A11 (Hoxa11), mRNA Length = 2246 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgccgcagcggaggtcgcagc 151 ||||||||||||||||||||| Sbjct: 588 cgccgcagcggaggtcgcagc 568
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 tcgaccccgccggatcgccgc 77 ||||||||||||||||||||| Sbjct: 73729 tcgaccccgccggatcgccgc 73709
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 cgcagcgcctcgccggcggcg 166 ||||||||||||||||||||| Sbjct: 138951 cgcagcgcctcgccggcggcg 138971
>gb|AC113985.11| Mus musculus chromosome 6, clone RP24-103E20, complete sequence Length = 169187 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 cgccgcagcggaggtcgcagc 151 ||||||||||||||||||||| Sbjct: 39895 cgccgcagcggaggtcgcagc 39915
>dbj|AK133481.1| Mus musculus 11 days pregnant adult female ovary and uterus cDNA, RIKEN full-length enriched library, clone:5031409E18 product:homeo box A11, full insert sequence Length = 2286 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgccgcagcggaggtcgcagc 151 ||||||||||||||||||||| Sbjct: 631 cgccgcagcggaggtcgcagc 611
>ref|XM_575479.1| PREDICTED: Rattus norvegicus similar to homeobox protein (LOC500127), mRNA Length = 2275 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgccgcagcggaggtcgcagc 151 ||||||||||||||||||||| Sbjct: 609 cgccgcagcggaggtcgcagc 589
>gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, complete sequence Length = 201379 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgccgcagcggaggtcgcagc 151 ||||||||||||||||||||| Sbjct: 68186 cgccgcagcggaggtcgcagc 68166
>gb|BC052232.1| Mus musculus cDNA clone IMAGE:6504963 Length = 2307 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgccgcagcggaggtcgcagc 151 ||||||||||||||||||||| Sbjct: 609 cgccgcagcggaggtcgcagc 589
>gb|U20371.1|MMU20371 Mus musculus homeobox protein (Hoxa11) gene, complete cds Length = 9038 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgccgcagcggaggtcgcagc 151 ||||||||||||||||||||| Sbjct: 5247 cgccgcagcggaggtcgcagc 5227
>gb|U20370.1|MMU20370 Mus musculus homeobox protein (Hoxa11) mRNA, complete cds Length = 2243 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgccgcagcggaggtcgcagc 151 ||||||||||||||||||||| Sbjct: 587 cgccgcagcggaggtcgcagc 567
>gb|U20367.1|MMU20367 Mus musculus Hoxa11 locus antisense-3C mRNA Length = 1434 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 cgccgcagcggaggtcgcagc 151 ||||||||||||||||||||| Sbjct: 99 cgccgcagcggaggtcgcagc 119
>ref|XM_483474.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1821 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 1488 cgcctcgccggcggcggcgc 1507
>ref|XM_480953.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2850 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 372 cgcctcgccggcggcggcgc 391
>ref|XM_519609.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ23749 (LOC464000), mRNA Length = 2364 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 tcgcagcgcctcgccggcggcggc 168 |||||||||||||| ||||||||| Sbjct: 780 tcgcagcgcctcgcaggcggcggc 757
>ref|XM_466223.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1412 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 258 cgcctcgccggcggcggcgc 239
>ref|XM_506827.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0038F20.11 mRNA Length = 1666 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 286 cgcctcgccggcggcggcgc 267
>ref|XM_464052.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2250 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatcgccgcgccgacgcggg 88 |||||||||||||||||||| Sbjct: 466 gatcgccgcgccgacgcggg 485
>ref|XM_473768.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2376 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 tcgcagcgcctcgccggcggcggc 168 |||| ||||||||||||||||||| Sbjct: 561 tcgcggcgcctcgccggcggcggc 584
>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete sequence Length = 120254 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gcgcctcgccggcggcggcg 169 |||||||||||||||||||| Sbjct: 110372 gcgcctcgccggcggcggcg 110391
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cgccggatcgccgcgccgac 83 |||||||||||||||||||| Sbjct: 3176283 cgccggatcgccgcgccgac 3176302 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 63 ccgccggatcgccgcgccg 81 ||||||||||||||||||| Sbjct: 37217 ccgccggatcgccgcgccg 37235
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gcgcctcgccggcggcggcg 169 |||||||||||||||||||| Sbjct: 24363585 gcgcctcgccggcggcggcg 24363566
>ref|XM_540001.2| PREDICTED: Canis familiaris similar to ring finger protein 127 (LOC482886), mRNA Length = 3897 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 tcgcagcgcctcgccggcggcggc 168 |||||||||||||| ||||||||| Sbjct: 1125 tcgcagcgcctcgcaggcggcggc 1102
>emb|AJ938071.1| Oryza sativa (indica cultivar-group) mRNA for Type A response regulator 2 (rr2 gene) Length = 759 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 120 cgcctcgccggcggcggcgc 101
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete sequence Length = 171664 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 gcgcctcgccggcggcggcg 169 |||||||||||||||||||| Sbjct: 17039 gcgcctcgccggcggcggcg 17058
>gb|AC123777.4| Homo sapiens chromosome 8, clone RP11-252C15, complete sequence Length = 175943 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 tcgcagcgcctcgccggcggcggc 168 |||||||||||||| ||||||||| Sbjct: 106312 tcgcagcgcctcgcaggcggcggc 106289
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cgccggatcgccgcgccgac 83 |||||||||||||||||||| Sbjct: 1353745 cgccggatcgccgcgccgac 1353764 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 63 ccgccggatcgccgcgccg 81 ||||||||||||||||||| Sbjct: 1396585 ccgccggatcgccgcgccg 1396603
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 tcgcagcgcctcgccggcggcggc 168 |||| ||||||||||||||||||| Sbjct: 39875 tcgcggcgcctcgccggcggcggc 39898
>emb|AJ515144.2|AXY515144 Achromobacter xylosoxidans plasmid pA81, strain A8 Length = 98192 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 cgcagcgcctcgccggcggc 165 |||||||||||||||||||| Sbjct: 11079 cgcagcgcctcgccggcggc 11060
>dbj|AB249662.1| Oryza sativa (japonica cultivar-group) OsRR2 mRNA for typeA response regulator 2, complete cds Length = 759 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 120 cgcctcgccggcggcggcgc 101
>gb|AE011799.1| Xanthomonas axonopodis pv. citri str. 306, section 177 of 469 of the complete genome Length = 12995 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 cgaccccgccggatcgccgcgccg 81 ||||||||| |||||||||||||| Sbjct: 4848 cgaccccgcaggatcgccgcgccg 4825
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cagcgcctcgccggcggcgg 167 |||||||||||||||||||| Sbjct: 2814279 cagcgcctcgccggcggcgg 2814260 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 106 ccgccgcacccagccgcca 124 ||||||||||||||||||| Sbjct: 3309513 ccgccgcacccagccgcca 3309495 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 153 cctcgccggcggcggcgcg 171 ||||||||||||||||||| Sbjct: 2922744 cctcgccggcggcggcgcg 2922726
>ref|NM_152271.3| Homo sapiens LON peptidase N-terminal domain and ring finger 1 (LONRF1), mRNA Length = 3584 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 145 tcgcagcgcctcgccggcggcggc 168 |||||||||||||| ||||||||| Sbjct: 780 tcgcagcgcctcgcaggcggcggc 757
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 cgccggatcgccgcgccgac 83 |||||||||||||||||||| Sbjct: 1279328 cgccggatcgccgcgccgac 1279309 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 63 ccgccggatcgccgcgccg 81 ||||||||||||||||||| Sbjct: 1237257 ccgccggatcgccgcgccg 1237239
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 tcgcagcgcctcgccggcggcggc 168 |||| ||||||||||||||||||| Sbjct: 30406497 tcgcggcgcctcgccggcggcggc 30406520
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 26408197 cgcctcgccggcggcggcgc 26408216 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 8881428 cgcctcgccggcggcggcgc 8881409
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 gcgcctcgccggcggcggcg 169 |||||||||||||||||||| Sbjct: 24281054 gcgcctcgccggcggcggcg 24281035
>gb|AC015631.10|AC015631 Homo sapiens, clone RP11-45L5, complete sequence Length = 145138 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 gcagcgcctcgccggcggcggcgc 170 ||||||||||| |||||||||||| Sbjct: 63763 gcagcgcctcggcggcggcggcgc 63740
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gcagcgcctcgccggcggcg 166 |||||||||||||||||||| Sbjct: 1128087 gcagcgcctcgccggcggcg 1128106
>gb|AE004486.1| Pseudomonas aeruginosa PAO1, section 47 of 529 of the complete genome Length = 12874 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 gcagcgcctcgccggcggcg 166 |||||||||||||||||||| Sbjct: 9507 gcagcgcctcgccggcggcg 9488
>gb|AE004462.1| Pseudomonas aeruginosa PAO1, section 23 of 529 of the complete genome Length = 9953 Score = 40.1 bits (20), Expect = 2.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 144 gtcgcagcgcctcgccggcggcggcgcg 171 ||||||| | |||||||||||||||||| Sbjct: 5093 gtcgcagaggctcgccggcggcggcgcg 5066
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 gccggatcgccgcgccgacg 84 |||||||||||||||||||| Sbjct: 799392 gccggatcgccgcgccgacg 799411 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 150 gcgcctcgccggcggcggc 168 ||||||||||||||||||| Sbjct: 4855185 gcgcctcgccggcggcggc 4855167 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 148 cagcgcctcgccggcggcg 166 ||||||||||||||||||| Sbjct: 3871295 cagcgcctcgccggcggcg 3871313 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 cctcgccggcggcggcgcg 171 ||||||||||||||||||| Sbjct: 2088888 cctcgccggcggcggcgcg 2088906 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 gcctcgccggcggcggcgc 170 ||||||||||||||||||| Sbjct: 291999 gcctcgccggcggcggcgc 291981 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 153 cctcgccggcggcggcgcg 171 ||||||||||||||||||| Sbjct: 161060 cctcgccggcggcggcgcg 161042
>dbj|AP003859.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1033_B09 Length = 120648 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 65071 cgcctcgccggcggcggcgc 65052
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 gaccccgccggatcgccgcg 78 |||||||||||||||||||| Sbjct: 5187570 gaccccgccggatcgccgcg 5187589
>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0038F20 Length = 129595 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 57196 cgcctcgccggcggcggcgc 57215
>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1789_C07 Length = 138944 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 57749 cgcctcgccggcggcggcgc 57768
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 137778 cgcctcgccggcggcggcgc 137797
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0081C13 Length = 144624 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatcgccgcgccgacgcggg 88 |||||||||||||||||||| Sbjct: 72310 gatcgccgcgccgacgcggg 72291
>dbj|AK100945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138G14, full insert sequence Length = 2850 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 372 cgcctcgccggcggcggcgc 391
>dbj|AK070645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061L14, full insert sequence Length = 1666 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 286 cgcctcgccggcggcggcgc 267
>dbj|AK069453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020J18, full insert sequence Length = 1412 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcgc 170 |||||||||||||||||||| Sbjct: 258 cgcctcgccggcggcggcgc 239
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gccgccaagttggcgccgca 137 |||||||||||||||||||| Sbjct: 1649577 gccgccaagttggcgccgca 1649558 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gccgccaagttggcgccgca 137 |||||||||||||||||||| Sbjct: 1449356 gccgccaagttggcgccgca 1449337 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gccgccaagttggcgccgca 137 |||||||||||||||||||| Sbjct: 582641 gccgccaagttggcgccgca 582660 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 69 gatcgccgcgccgacgcgg 87 ||||||||||||||||||| Sbjct: 918436 gatcgccgcgccgacgcgg 918454
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gccgccaagttggcgccgca 137 |||||||||||||||||||| Sbjct: 3499405 gccgccaagttggcgccgca 3499386 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gccgccaagttggcgccgca 137 |||||||||||||||||||| Sbjct: 3428300 gccgccaagttggcgccgca 3428319 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gccgccaagttggcgccgca 137 |||||||||||||||||||| Sbjct: 2048691 gccgccaagttggcgccgca 2048710 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gccgccaagttggcgccgca 137 |||||||||||||||||||| Sbjct: 1590023 gccgccaagttggcgccgca 1590004
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 cagcgcctcgccggcggcggcgcg 171 ||||| |||||||||||||||||| Sbjct: 5920171 cagcgtctcgccggcggcggcgcg 5920194
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 tcgcagcgcctcgccggcggcggc 168 |||| ||||||||||||||||||| Sbjct: 156393 tcgcggcgcctcgccggcggcggc 156416
>ref|XM_493955.1| Oryza sativa (japonica cultivar-group), Ozsa8020 predicted mRNA Length = 1587 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 28 cgcctcgccggcggcggcg 46
>ref|XM_464652.1| Oryza sativa (japonica cultivar-group), mRNA Length = 213 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 141 cgcctcgccggcggcggcg 159
>ref|NM_196925.1| Oryza sativa (japonica cultivar-group) putative flowering-time gene protein (OSJNBa0006L06.6), mRNA Length = 1594 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 738 cgcctcgccggcggcggcg 720
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 148 cagcgcctcgccggcggcg 166 ||||||||||||||||||| Sbjct: 960476 cagcgcctcgccggcggcg 960458
>ref|XM_463382.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 465 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 147 gcagcgcctcgccggcggcggcg 169 ||||||| ||||||||||||||| Sbjct: 69 gcagcgcttcgccggcggcggcg 91
>gb|AC137753.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084M23, complete sequence Length = 134180 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 cctcgccggcggcggcgcg 171 ||||||||||||||||||| Sbjct: 128498 cctcgccggcggcggcgcg 128516
>gb|AF182374.6| Bradyrhizobium sp. ORS278 photosynthetic gene cluser, complete sequence; and bacteriophytochrome (bphP), PpsR protein (ppsR), cytochrome C2 (cycA), geranylgeranyl bacteriochlorophyll reductase (bchP), light harvesting pigment major facilitator family (bch2), geranylgeranyl-bacteriochlorophyll synthetase (bchG), PpsR1 (ppsR1), and transcriptional regulator, AerR (aerR) genes, complete cds; and 2-vinyl bacteriochlorophillide hydratase BchF subunit (bchF) gene, partial cds Length = 30040 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 148 cagcgcctcgccggcggcg 166 ||||||||||||||||||| Sbjct: 20116 cagcgcctcgccggcggcg 20134
>gb|AE009284.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 54 of 187 of the complete sequence Length = 10492 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 63 ccgccggatcgccgcgccg 81 ||||||||||||||||||| Sbjct: 4403 ccgccggatcgccgcgccg 4421
>gb|AE008328.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 132 of 187 of the complete sequence Length = 10353 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 63 ccgccggatcgccgcgccg 81 ||||||||||||||||||| Sbjct: 7882 ccgccggatcgccgcgccg 7864
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 66255 cgcctcgccggcggcggcg 66237
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 cctcgccggcggcggcgcg 171 ||||||||||||||||||| Sbjct: 65261 cctcgccggcggcggcgcg 65279
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 148 cagcgcctcgccggcggcg 166 ||||||||||||||||||| Sbjct: 688444 cagcgcctcgccggcggcg 688462
>gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0099J16, complete sequence Length = 133198 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 cctcgccggcggcggcgcg 171 ||||||||||||||||||| Sbjct: 95342 cctcgccggcggcggcgcg 95360
>gb|AY993941.1| Microbacterium arborescens strain SE 14 cosmid MAS10D5, complete sequence Length = 33203 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 146 cgcagcgcctcgccggcgg 164 ||||||||||||||||||| Sbjct: 15015 cgcagcgcctcgccggcgg 15033
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 61 ccccgccggatcgccgcgc 79 ||||||||||||||||||| Sbjct: 263285 ccccgccggatcgccgcgc 263267 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 57 tcgaccccgccggatcgccgcgc 79 ||||||| ||||||||||||||| Sbjct: 9440 tcgacccggccggatcgccgcgc 9418
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 61 ccccgccggatcgccgcgccgac 83 |||||||||||||||||| |||| Sbjct: 223047 ccccgccggatcgccgcggcgac 223069
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 52712 cgcctcgccggcggcggcg 52694
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 cggatcgccgcgccgacgc 85 ||||||||||||||||||| Sbjct: 2670267 cggatcgccgcgccgacgc 2670285 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 148 cagcgcctcgccggcggcg 166 ||||||||||||||||||| Sbjct: 2235220 cagcgcctcgccggcggcg 2235202 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 147 gcagcgcctcgccggcggcggcg 169 |||||||||||||||| |||||| Sbjct: 2005748 gcagcgcctcgccggccgcggcg 2005726
>gb|AE005999.1| Caulobacter crescentus CB15 section 325 of 359 of the complete genome Length = 12079 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 146 cgcagcgcctcgccggcggcggc 168 |||||||||||| |||||||||| Sbjct: 9998 cgcagcgcctcggcggcggcggc 10020
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 147 gcagcgcctcgccggcggc 165 ||||||||||||||||||| Sbjct: 4274771 gcagcgcctcgccggcggc 4274789
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 146 cgcagcgcctcgccggcggcggc 168 |||||||||| |||||||||||| Sbjct: 2392806 cgcagcgccttgccggcggcggc 2392828 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 63 ccgccggatcgccgcgccg 81 ||||||||||||||||||| Sbjct: 2141875 ccgccggatcgccgcgccg 2141893
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 153 cctcgccggcggcggcgcg 171 ||||||||||||||||||| Sbjct: 2844611 cctcgccggcggcggcgcg 2844593
>emb|BX931080.2| Gallus gallus finished cDNA, clone ChEST200b23 Length = 763 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 1 cgcctcgccggcggcggcg 19
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 cctcgccggcggcggcgcg 171 ||||||||||||||||||| Sbjct: 20168849 cctcgccggcggcggcgcg 20168867
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 153 cctcgccggcggcggcgcg 171 ||||||||||||||||||| Sbjct: 25909624 cctcgccggcggcggcgcg 25909606
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 16708195 cgcctcgccggcggcggcg 16708177
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 8901840 cgcctcgccggcggcggcg 8901822 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 7581869 cgcctcgccggcggcggcg 7581851 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 3594818 cgcctcgccggcggcggcg 3594800 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 1143251 cgcctcgccggcggcggcg 1143233 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 1128425 cgcctcgccggcggcggcg 1128407
>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0675A05 Length = 131972 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 86655 cgcctcgccggcggcggcg 86637
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 119474 cgcctcgccggcggcggcg 119456 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 104648 cgcctcgccggcggcggcg 104630
>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528B02 Length = 144495 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 67469 cgcctcgccggcggcggcg 67451
>dbj|AP003504.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025A05 Length = 154298 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 147 gcagcgcctcgccggcggcggcg 169 ||||||| ||||||||||||||| Sbjct: 11495 gcagcgcttcgccggcggcggcg 11473
>dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0412C04 Length = 146849 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 141800 cgcctcgccggcggcggcg 141782
>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_C11 Length = 124827 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 5124 cgcctcgccggcggcggcg 5106
>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1307A11 Length = 131538 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 58156 cgcctcgccggcggcggcg 58138
>dbj|AK105530.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G09, full insert sequence Length = 1939 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 42 cgcctcgccggcggcggcg 60
>dbj|AK069224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014J18, full insert sequence Length = 1444 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 368 cgcctcgccggcggcggcg 350
>dbj|AK064715.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-D11, full insert sequence Length = 967 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 385 cgcctcgccggcggcggcg 403
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 151 cgcctcgccggcggcggcg 169 ||||||||||||||||||| Sbjct: 16717235 cgcctcgccggcggcggcg 16717217
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 153 cctcgccggcggcggcgcg 171 ||||||||||||||||||| Sbjct: 26228322 cctcgccggcggcggcgcg 26228304 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 cctcgccggcggcggcgcg 171 ||||||||||||||||||| Sbjct: 20173173 cctcgccggcggcggcgcg 20173191
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 cctcgccggcggcggcgcg 171 ||||||||||||||||||| Sbjct: 20095063 cctcgccggcggcggcgcg 20095081
>emb|AL713944.3|CNS07YPN Oryza sativa chromosome 12, . BAC OJ1116_G12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152862 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 153 cctcgccggcggcggcgcg 171 ||||||||||||||||||| Sbjct: 33083 cctcgccggcggcggcgcg 33101
>emb|AL591782.1|SME591782 Sinorhizobium meliloti 1021 complete chromosome; segment 1/12 Length = 260050 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 147 gcagcgcctcgccggcggc 165 ||||||||||||||||||| Sbjct: 31993 gcagcgcctcgccggcggc 32011
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 115 ccagccgccaagttggcgc 133 ||||||||||||||||||| Sbjct: 379388 ccagccgccaagttggcgc 379370 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,334,217 Number of Sequences: 3902068 Number of extensions: 1334217 Number of successful extensions: 120208 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 109809 Number of HSP's gapped (non-prelim): 10399 length of query: 171 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 149 effective length of database: 17,147,199,772 effective search space: 2554932766028 effective search space used: 2554932766028 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
