ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl55f11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SAPS2_MOUSE (Q8R3Q2) SAPS domain family member 2 | 76 | 4e-14 | 2 | SAPS3_CHICK (Q5F471) SAPS domain family member 3 | 74 | 1e-13 | 3 | SAPS2_HUMAN (O75170) SAPS domain family member 2 | 74 | 2e-13 | 4 | SAPS3_MOUSE (Q922D4) SAPS domain family member 3 | 73 | 3e-13 | 5 | SAPS3_HUMAN (Q5H9R7) SAPS domain family member 3 (Sporulation-in... | 73 | 3e-13 | 6 | SAP3B_XENLA (Q6NRF1) SAPS domain family member 3-B | 71 | 1e-12 | 7 | SAP3A_XENLA (Q6NRI0) SAPS domain family member 3-A | 70 | 2e-12 | 8 | SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1 | 70 | 3e-12 | 9 | SAPS1_MOUSE (Q7TSI3) SAPS domain family member 1 | 68 | 1e-11 | 10 | Y928_TREPA (O83898) Hypothetical protein TP0928 | 29 | 4.5 | 11 | ENV_HV1JR (P20871) Envelope polyprotein GP160 precursor [Contain... | 29 | 4.5 |
|---|
>SAPS2_MOUSE (Q8R3Q2) SAPS domain family member 2| Length = 923 Score = 75.9 bits (185), Expect = 4e-14 Identities = 37/93 (39%), Positives = 57/93 (61%) Frame = +3 Query: 147 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKVQVEQLLR 326 MFW+ L+ S VD +LDKE+ T I+QECKA N +L++FL + +E+L+ Sbjct: 1 MFWKFD-LNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVN 59 Query: 327 YVVEEVPDDAEKKRSFKFPFIACEIFTCEIDVI 425 + ++ P D E+K FK+P ACE+ TC++ I Sbjct: 60 LITQDPPQDMEEKVRFKYPNTACELLTCDVPQI 92
>SAPS3_CHICK (Q5F471) SAPS domain family member 3| Length = 873 Score = 74.3 bits (181), Expect = 1e-13 Identities = 34/93 (36%), Positives = 58/93 (62%) Frame = +3 Query: 147 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKVQVEQLLR 326 MFW+ L ++S +DT+L++E+ T ++QECKA N +LI FL +E L+ Sbjct: 1 MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKSECLEDLVS 59 Query: 327 YVVEEVPDDAEKKRSFKFPFIACEIFTCEIDVI 425 +++EE P D ++K +K+P I+CE+ T ++ I Sbjct: 60 FIIEEPPQDMDEKIRYKYPNISCELLTSDVSQI 92
>SAPS2_HUMAN (O75170) SAPS domain family member 2| Length = 927 Score = 73.9 bits (180), Expect = 2e-13 Identities = 37/93 (39%), Positives = 57/93 (61%) Frame = +3 Query: 147 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKVQVEQLLR 326 MFW+ L+ S VD +LDKE+ T I+QECKA N +L++FL + +E+L+ Sbjct: 1 MFWKFD-LNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVS 59 Query: 327 YVVEEVPDDAEKKRSFKFPFIACEIFTCEIDVI 425 + ++ P D E+K FK+P ACE+ TC++ I Sbjct: 60 LITQDPPLDMEEKVRFKYPNTACELLTCDVPQI 92
>SAPS3_MOUSE (Q922D4) SAPS domain family member 3| Length = 844 Score = 73.2 bits (178), Expect = 3e-13 Identities = 33/90 (36%), Positives = 57/90 (63%) Frame = +3 Query: 147 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKVQVEQLLR 326 MFW+ L ++S +DT+L++E+ T ++QECKA N +LI FL +E L+ Sbjct: 1 MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKAECLEDLVS 59 Query: 327 YVVEEVPDDAEKKRSFKFPFIACEIFTCEI 416 +++EE P D ++K +K+P I+CE+ T ++ Sbjct: 60 FIIEEPPQDMDEKIRYKYPNISCELLTSDV 89
>SAPS3_HUMAN (Q5H9R7) SAPS domain family member 3 (Sporulation-induced| transcript 4-associated protein SAPL) (Protein phosphatase 6 regulatory subunit 3) Length = 873 Score = 73.2 bits (178), Expect = 3e-13 Identities = 33/90 (36%), Positives = 57/90 (63%) Frame = +3 Query: 147 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKVQVEQLLR 326 MFW+ L ++S +DT+L++E+ T ++QECKA N +LI FL +E L+ Sbjct: 1 MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKAECLEDLVS 59 Query: 327 YVVEEVPDDAEKKRSFKFPFIACEIFTCEI 416 +++EE P D ++K +K+P I+CE+ T ++ Sbjct: 60 FIIEEPPQDMDEKIRYKYPNISCELLTSDV 89
>SAP3B_XENLA (Q6NRF1) SAPS domain family member 3-B| Length = 850 Score = 70.9 bits (172), Expect = 1e-12 Identities = 32/93 (34%), Positives = 56/93 (60%) Frame = +3 Query: 147 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKVQVEQLLR 326 MFW+ L ++S +DT+L+++ T I+QECKA N +L+ FL +E L+ Sbjct: 1 MFWKFD-LHSSSHIDTLLERDEVTLKELMDEEDILQECKAQNRKLVEFLLKSECLEDLVT 59 Query: 327 YVVEEVPDDAEKKRSFKFPFIACEIFTCEIDVI 425 ++ EE P D ++K +K+P ++CE+ T ++ I Sbjct: 60 FITEEPPQDMDEKIRYKYPNLSCELLTSDVSQI 92
>SAP3A_XENLA (Q6NRI0) SAPS domain family member 3-A| Length = 852 Score = 70.5 bits (171), Expect = 2e-12 Identities = 32/93 (34%), Positives = 56/93 (60%) Frame = +3 Query: 147 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKVQVEQLLR 326 MFW+ L ++S +DT+L+++ T I+QECKA N +L+ FL +E L+ Sbjct: 1 MFWKFD-LHSSSHIDTLLERDEVTLKELMDEEDILQECKAQNRKLVEFLLKAECLEDLVT 59 Query: 327 YVVEEVPDDAEKKRSFKFPFIACEIFTCEIDVI 425 ++ EE P D ++K +K+P ++CE+ T ++ I Sbjct: 60 FITEEPPQDMDEKIRYKYPNLSCELLTSDVSQI 92
>SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1| Length = 881 Score = 69.7 bits (169), Expect = 3e-12 Identities = 30/93 (32%), Positives = 57/93 (61%) Frame = +3 Query: 147 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKVQVEQLLR 326 MFW+ L +S +DT+L++E+ + ++QECK +N +L++FL ++ ++ Sbjct: 1 MFWKFD-LHTSSHLDTLLEREDLSLPELLDEEDVLQECKVVNRKLLDFLLQPPHLQAMVA 59 Query: 327 YVVEEVPDDAEKKRSFKFPFIACEIFTCEIDVI 425 +V +E PD E++ +K+P +ACEI T ++ I Sbjct: 60 WVTQEPPDSGEERLRYKYPSVACEILTSDVPQI 92
>SAPS1_MOUSE (Q7TSI3) SAPS domain family member 1| Length = 856 Score = 67.8 bits (164), Expect = 1e-11 Identities = 30/93 (32%), Positives = 56/93 (60%) Frame = +3 Query: 147 MFWRMTGLSAASPVDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKVQVEQLLR 326 MFW+ L +S +DT+L+KE+ + ++QECK +N +L++FL ++ ++ Sbjct: 1 MFWKFD-LHTSSHLDTLLEKEDLSLPELLDEEDVLQECKVVNRKLLDFLLQPSHLQAMVA 59 Query: 327 YVVEEVPDDAEKKRSFKFPFIACEIFTCEIDVI 425 +V +E P E++ +K+P +ACEI T ++ I Sbjct: 60 WVTQEPPASGEERLRYKYPSVACEILTSDVPQI 92
>Y928_TREPA (O83898) Hypothetical protein TP0928| Length = 246 Score = 29.3 bits (64), Expect = 4.5 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +3 Query: 267 LNTRLINFLRDKVQVEQLLRYVV---EEVPDDAEKKRSFKFP-FIACEIFTC 410 LN+R + F++D + E+ RYVV E P + + P F+ C F C Sbjct: 180 LNSRELRFVQDMAKKERSFRYVVLGEERFPAERVSRTGKSMPTFLPCITFPC 231
>ENV_HV1JR (P20871) Envelope polyprotein GP160 precursor [Contains: Exterior| membrane glycoprotein (GP120); Transmembrane glycoprotein (GP41)] Length = 848 Score = 29.3 bits (64), Expect = 4.5 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +3 Query: 255 ECKALNTRLINFLRDKVQVEQLLRYVVEEVPDDAEKKRSFKFPFIAC 395 E K + + +RDKVQ E L Y ++ VP D K + K+ I+C Sbjct: 150 EIKNCSFNITKSIRDKVQKEYALFYKLDVVPID--NKNNTKYRLISC 194 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,689,031 Number of Sequences: 219361 Number of extensions: 684208 Number of successful extensions: 1843 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1819 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1843 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
