ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl55f07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 3e-05 Identities = 73/87 (83%), Gaps = 3/87 (3%) Strand = Plus / Minus Query: 332 caagctggggtgacggctggcttcccccagcagtcgctaccactgccgccgccgc---tg 388 ||||||||||| |||| ||||||||| ||||| | ||||||| ||||||||||| || Sbjct: 5979356 caagctggggtaacgggtggcttccctcagcaaccactaccaccgccgccgccgcgaatg 5979297 Query: 389 gtgcagtacccgcagcccccagcaatg 415 | ||||| |||||||| ||||||||| Sbjct: 5979296 gcacagtatccgcagccgccagcaatg 5979270 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Minus Query: 202 cgagggtttggactccgagccggggatgtacggacagggaggg 244 ||||||||| || ||||||| ||||||||||| ||||||||| Sbjct: 5979447 cgagggtttcgattccgagcttgggatgtacggtcagggaggg 5979405 Score = 40.1 bits (20), Expect = 6.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 45 ccgccgcgcgccgccgtcgcggcggccgtccc 76 ||||||||||||||| ||||||| |||||||| Sbjct: 20458071 ccgccgcgcgccgcc-tcgcggccgccgtccc 20458101
>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08, complete sequence Length = 111961 Score = 58.0 bits (29), Expect = 3e-05 Identities = 73/87 (83%), Gaps = 3/87 (3%) Strand = Plus / Minus Query: 332 caagctggggtgacggctggcttcccccagcagtcgctaccactgccgccgccgc---tg 388 ||||||||||| |||| ||||||||| ||||| | ||||||| ||||||||||| || Sbjct: 37891 caagctggggtaacgggtggcttccctcagcaaccactaccaccgccgccgccgcgaatg 37832 Query: 389 gtgcagtacccgcagcccccagcaatg 415 | ||||| |||||||| ||||||||| Sbjct: 37831 gcacagtatccgcagccgccagcaatg 37805 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Minus Query: 202 cgagggtttggactccgagccggggatgtacggacagggaggg 244 ||||||||| || ||||||| ||||||||||| ||||||||| Sbjct: 37982 cgagggtttcgattccgagcttgggatgtacggtcagggaggg 37940
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 3e-05 Identities = 73/87 (83%), Gaps = 3/87 (3%) Strand = Plus / Minus Query: 332 caagctggggtgacggctggcttcccccagcagtcgctaccactgccgccgccgc---tg 388 ||||||||||| |||| ||||||||| ||||| | ||||||| ||||||||||| || Sbjct: 5978569 caagctggggtaacgggtggcttccctcagcaaccactaccaccgccgccgccgcgaatg 5978510 Query: 389 gtgcagtacccgcagcccccagcaatg 415 | ||||| |||||||| ||||||||| Sbjct: 5978509 gcacagtatccgcagccgccagcaatg 5978483 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Minus Query: 202 cgagggtttggactccgagccggggatgtacggacagggaggg 244 ||||||||| || ||||||| ||||||||||| ||||||||| Sbjct: 5978660 cgagggtttcgattccgagcttgggatgtacggtcagggaggg 5978618 Score = 40.1 bits (20), Expect = 6.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 45 ccgccgcgcgccgccgtcgcggcggccgtccc 76 ||||||||||||||| ||||||| |||||||| Sbjct: 20451100 ccgccgcgcgccgcc-tcgcggccgccgtccc 20451130
>dbj|AK100534.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101N06, full insert sequence Length = 3665 Score = 58.0 bits (29), Expect = 3e-05 Identities = 73/87 (83%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 332 caagctggggtgacggctggcttcccccagcagtcgctaccactgccgccgccgc---tg 388 ||||||||||| |||| ||||||||| ||||| | ||||||| ||||||||||| || Sbjct: 393 caagctggggtaacgggtggcttccctcagcaaccactaccaccgccgccgccgcgaatg 452 Query: 389 gtgcagtacccgcagcccccagcaatg 415 | ||||| |||||||| ||||||||| Sbjct: 453 gcacagtatccgcagccgccagcaatg 479 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Plus Query: 202 cgagggtttggactccgagccggggatgtacggacagggaggg 244 ||||||||| || ||||||| ||||||||||| ||||||||| Sbjct: 302 cgagggtttcgattccgagcttgggatgtacggtcagggaggg 344
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 305 ccgcttccgccgccaccgcctcg 327 ||||||||||||||||||||||| Sbjct: 47701 ccgcttccgccgccaccgcctcg 47723
>gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, complete sequence Length = 214702 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 218 gagccggggatgtacggacagggaggg 244 ||||||||||||| ||||||||||||| Sbjct: 36006 gagccggggatgtgcggacagggaggg 36032
>gb|AC055858.18| Homo sapiens chromosome 17, clone RP11-682M7, complete sequence Length = 167395 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 218 gagccggggatgtacggacagggaggg 244 ||||||||||||| ||||||||||||| Sbjct: 145684 gagccggggatgtgcggacagggaggg 145710
>ref|NM_115874.2| Arabidopsis thaliana DNA binding AT3G60110 mRNA, complete cds Length = 2384 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 caccaccgccgcctccgccgct 294 |||||||||||||||||||||| Sbjct: 1043 caccaccgccgcctccgccgct 1022
>ref|XM_465772.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1584 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 371 ccactgccgccgccgctggtgc 392 |||||||||||||||||||||| Sbjct: 816 ccactgccgccgccgctggtgc 837
>ref|NM_196733.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0094K20.8), mRNA Length = 1410 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 269 gccgcaccaccgccgcctccgccgct 294 ||||||||||||||||| |||||||| Sbjct: 93 gccgcaccaccgccgccgccgccgct 118
>ref|XM_472877.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2709 Score = 44.1 bits (22), Expect = 0.39 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 43 ctccgccgcgcgccgccgtcgcggcggccg 72 ||||||||| |||||||||||||||||||| Sbjct: 1125 ctccgccgc-cgccgccgtcgcggcggccg 1153
>ref|XM_957077.1| Neurospora crassa OR74A hypothetical protein (NCU07031.1) partial mRNA Length = 483 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cgcaccaccgccgcctccgccgctgt 296 ||||||||||||||| |||||||||| Sbjct: 373 cgcaccaccgccgccgccgccgctgt 398
>ref|XM_327316.1| Neurospora crassa OR74A hypothetical protein (NCU07031.1) partial mRNA Length = 483 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cgcaccaccgccgcctccgccgctgt 296 ||||||||||||||| |||||||||| Sbjct: 373 cgcaccaccgccgccgccgccgctgt 398
>gb|BT000519.1| Arabidopsis thaliana unknown protein (At3g60110/T2O9_90) mRNA, complete cds Length = 1926 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 caccaccgccgcctccgccgct 294 |||||||||||||||||||||| Sbjct: 877 caccaccgccgcctccgccgct 856
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 44.1 bits (22), Expect = 0.39 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 43 ctccgccgcgcgccgccgtcgcggcggccg 72 ||||||||| |||||||||||||||||||| Sbjct: 25432 ctccgccgc-cgccgccgtcgcggcggccg 25404
>emb|AL138658.1|ATT2O9 Arabidopsis thaliana DNA chromosome 3, BAC clone T2O9 Length = 90823 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 caccaccgccgcctccgccgct 294 |||||||||||||||||||||| Sbjct: 36401 caccaccgccgcctccgccgct 36380
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 55 ccgccgtcgcggcggccgtccccgcc 80 |||||||| ||||||||||||||||| Sbjct: 3390606 ccgccgtcccggcggccgtccccgcc 3390581 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 52 gcgccgccgtcgcggcggccgtccc 76 |||||||||||||| |||||||||| Sbjct: 2285898 gcgccgccgtcgcgacggccgtccc 2285922
>gb|AY056393.1| Arabidopsis thaliana AT3g60110/T2O9_90 mRNA, complete cds Length = 2385 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 273 caccaccgccgcctccgccgct 294 |||||||||||||||||||||| Sbjct: 1044 caccaccgccgcctccgccgct 1023
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.39 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 43 ctccgccgcgcgccgccgtcgcggcggccg 72 ||||||||| |||||||||||||||||||| Sbjct: 23860559 ctccgccgc-cgccgccgtcgcggcggccg 23860531 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 caccaccgccgcctccgccgc 293 ||||||||||||||||||||| Sbjct: 31273452 caccaccgccgcctccgccgc 31273432 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 caccaccgccgcctccgccgctgtc 297 ||||||||||||| ||||||||||| Sbjct: 7010907 caccaccgccgccgccgccgctgtc 7010931
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 269 gccgcaccaccgccgcctccgccgct 294 ||||||||||||||||| |||||||| Sbjct: 15584242 gccgcaccaccgccgccgccgccgct 15584217
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 371 ccactgccgccgccgctggtgc 392 |||||||||||||||||||||| Sbjct: 17324211 ccactgccgccgccgctggtgc 17324232 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 gcgccgccgtcgcggcggccg 72 ||||||||||||||||||||| Sbjct: 23425863 gcgccgccgtcgcggcggccg 23425883 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 11477866 ccaccgccgcctccgccgctg 11477846
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 269 gccgcaccaccgccgcctccgccgct 294 ||||||||||||||||| |||||||| Sbjct: 71608 gccgcaccaccgccgccgccgccgct 71583
>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0579G08 Length = 164452 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 371 ccactgccgccgccgctggtgc 392 |||||||||||||||||||||| Sbjct: 96894 ccactgccgccgccgctggtgc 96915
>dbj|AK120673.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161G16, full insert sequence Length = 1703 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 269 gccgcaccaccgccgcctccgccgct 294 ||||||||||||||||| |||||||| Sbjct: 144 gccgcaccaccgccgccgccgccgct 169
>dbj|AK107598.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-B02, full insert sequence Length = 1584 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 371 ccactgccgccgccgctggtgc 392 |||||||||||||||||||||| Sbjct: 816 ccactgccgccgccgctggtgc 837
>dbj|AK072552.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131B08, full insert sequence Length = 2568 Score = 44.1 bits (22), Expect = 0.39 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 43 ctccgccgcgcgccgccgtcgcggcggccg 72 ||||||||| |||||||||||||||||||| Sbjct: 4 ctccgccgc-cgccgccgtcgcggcggccg 32
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 269 gccgcaccaccgccgcctccgccgct 294 ||||||||||||||||| |||||||| Sbjct: 15592483 gccgcaccaccgccgccgccgccgct 15592458
>ref|XM_473887.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3105 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 caccaccgccgcctccgccgc 293 ||||||||||||||||||||| Sbjct: 250 caccaccgccgcctccgccgc 230
>ref|XM_466572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1146 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 gcgccgccgtcgcggcggccg 72 ||||||||||||||||||||| Sbjct: 28 gcgccgccgtcgcggcggccg 8
>ref|XM_465098.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1605 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 359 ccaccgccgcctccgccgctg 339
>ref|NM_187013.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1032 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 gccgcaccaccgccgcctccgccgc 293 ||||||||||||||||| ||||||| Sbjct: 584 gccgcaccaccgccgccgccgccgc 608
>ref|XM_477156.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1698 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 cgcaccaccgccgcctccgcc 291 ||||||||||||||||||||| Sbjct: 74 cgcaccaccgccgcctccgcc 94
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 cgccgccgtcgcggcggccgt 73 ||||||||||||||||||||| Sbjct: 3116537 cgccgccgtcgcggcggccgt 3116517 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 cgcgcgccgccgtcgcggcggccg 72 |||| ||||||||||||||||||| Sbjct: 596276 cgcgtgccgccgtcgcggcggccg 596299
>ref|XM_417532.1| PREDICTED: Gallus gallus espin (LOC395461), mRNA Length = 1343 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 caccaccgccgcctccgccgc 293 ||||||||||||||||||||| Sbjct: 674 caccaccgccgcctccgccgc 694 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 634 ccaccgccgcctccgccgctg 654
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 cgccgccgtcgcggcggccgt 73 ||||||||||||||||||||| Sbjct: 1313378 cgccgccgtcgcggcggccgt 1313358 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cgcgcgccgccgtcgcggcggccg 72 |||| ||||||||||||||||||| Sbjct: 3178437 cgcgtgccgccgtcgcggcggccg 3178414
>ref|NM_018693.2| Homo sapiens F-box protein 11 (FBXO11), transcript variant 2, mRNA Length = 2567 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 136 ccaccgccgcctccgccgctg 156
>ref|NM_025133.3| Homo sapiens F-box protein 11 (FBXO11), transcript variant 1, mRNA Length = 3951 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 136 ccaccgccgcctccgccgctg 156
>ref|NM_012167.1| Homo sapiens F-box protein 11 (FBXO11), transcript variant 3, mRNA Length = 2154 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 136 ccaccgccgcctccgccgctg 156
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 ccgccgcgcgccgccgtcgcggcgg 69 |||||||| |||||||||||||||| Sbjct: 1889016 ccgccgcgagccgccgtcgcggcgg 1889040
>gb|AC161824.6| Mus musculus 6 BAC RP23-62E9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 263206 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 236577 ccaccgccgcctccgccgctg 236557
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 cgccgccgtcgcggcggccgt 73 ||||||||||||||||||||| Sbjct: 1217598 cgccgccgtcgcggcggccgt 1217578 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cgcgcgccgccgtcgcggcggccg 72 |||| ||||||||||||||||||| Sbjct: 2908317 cgcgtgccgccgtcgcggcggccg 2908294
>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21, complete sequence Length = 166475 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 caccaccgccgcctccgccgctgtc 297 ||||||||||||| ||||||||||| Sbjct: 32098 caccaccgccgccgccgccgctgtc 32122
>emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008M17, complete sequence Length = 133279 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 caccaccgccgcctccgccgc 293 ||||||||||||||||||||| Sbjct: 95054 caccaccgccgcctccgccgc 95034
>ref|NM_080522.2| Drosophila melanogaster belle CG9748-RA (bel), mRNA Length = 3366 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 accgcttccgccgccaccgcc 324 ||||||||||||||||||||| Sbjct: 1288 accgcttccgccgccaccgcc 1268
>gb|AY089613.1| Drosophila melanogaster RE28061 full insert cDNA Length = 3057 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 accgcttccgccgccaccgcc 324 ||||||||||||||||||||| Sbjct: 980 accgcttccgccgccaccgcc 960
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 245958 ccaccgccgcctccgccgctg 245938
>gb|AC009512.6| Drosophila melanogaster, chromosome 3R, region 85B-85B, BAC clone BACR01F13, complete sequence Length = 167467 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 accgcttccgccgccaccgcc 324 ||||||||||||||||||||| Sbjct: 132552 accgcttccgccgccaccgcc 132532
>gb|AC007571.6| Drosophila melanogaster, chromosome 3R, region 85A1-85A10, BAC clone BACR48A14, complete sequence Length = 188337 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 accgcttccgccgccaccgcc 324 ||||||||||||||||||||| Sbjct: 13667 accgcttccgccgccaccgcc 13647
>gb|AF350270.1|AF350270 Dolomedes tenebrosus fibroin 2 mRNA, partial cds Length = 2078 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 371 ccactgccgccgccgctggtg 391 ||||||||||||||||||||| Sbjct: 694 ccactgccgccgccgctggtg 714
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 gccgcaccaccgccgcctccgccgc 293 ||||||||||||||||| ||||||| Sbjct: 23743614 gccgcaccaccgccgccgccgccgc 23743638 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 cgcaccaccgccgcctccgcc 291 ||||||||||||||||||||| Sbjct: 7189985 cgcaccaccgccgcctccgcc 7189965 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 ccaccgccgcctccgccgct 294 |||||||||||||||||||| Sbjct: 8211924 ccaccgccgcctccgccgct 8211905
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 cgcaccaccgccgcctccgccgctg 295 ||||||||||||||| ||||||||| Sbjct: 36690372 cgcaccaccgccgccgccgccgctg 36690396 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgccgcgcgccgccgtcgc 64 |||||||||||||||||||| Sbjct: 31913141 ccgccgcgcgccgccgtcgc 31913160 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 ||||||||||||| |||||||||| Sbjct: 3594793 ccgcaccaccgccccctccgccgc 3594770
>gb|AY827075.1| Homo sapiens F-box protein 11 (FBXO11) mRNA, complete cds Length = 2784 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 181 ccaccgccgcctccgccgctg 201
>gb|AC079807.5| Homo sapiens BAC clone RP11-760G15 from 2, complete sequence Length = 156175 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 90430 ccaccgccgcctccgccgctg 90410
>gb|AC153598.4| Mus musculus 6 BAC RP23-167L15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209035 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 88225 ccaccgccgcctccgccgctg 88245
>dbj|AK223592.1| Homo sapiens mRNA for F-box only protein 11 isoform 1 variant, clone: FCC130H05 Length = 2791 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 138 ccaccgccgcctccgccgctg 158
>gb|BC043258.1| Homo sapiens, clone MGC:44383 IMAGE:5296581, mRNA, complete cds Length = 3960 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 145 ccaccgccgcctccgccgctg 165
>gb|AF176706.1| Homo sapiens F-box protein FBX11 mRNA, partial cds Length = 666 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 124 ccaccgccgcctccgccgctg 144
>gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequence Length = 38975 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 16038 ccaccgccgcctccgccgctg 16058
>gb|AF239885.1|AF239885 Gallus gallus espin mRNA, partial cds Length = 1222 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 caccaccgccgcctccgccgc 293 ||||||||||||||||||||| Sbjct: 83 caccaccgccgcctccgccgc 103 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 43 ccaccgccgcctccgccgctg 63
>dbj|AP004072.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529H11 Length = 165969 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 cgcaccaccgccgcctccgccgctg 295 ||||||||||||||| ||||||||| Sbjct: 163638 cgcaccaccgccgccgccgccgctg 163662
>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0529E05 Length = 134982 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 cgcaccaccgccgcctccgccgctg 295 ||||||||||||||| ||||||||| Sbjct: 16687 cgcaccaccgccgccgccgccgctg 16711
>gb|AF239691.1|AF239691 Drosophila melanogaster unknown gene Length = 2404 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 accgcttccgccgccaccgcc 324 ||||||||||||||||||||| Sbjct: 581 accgcttccgccgccaccgcc 561
>gb|AF351618.1| Homo sapiens UG063H01 mRNA, complete cds Length = 2243 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 55 ccaccgccgcctccgccgctg 75
>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030M21 Length = 155970 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 60358 ccaccgccgcctccgccgctg 60338
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 50 gcgcgccgccgtcgcggcggccgtc 74 |||||||| |||||||||||||||| Sbjct: 3337138 gcgcgccgacgtcgcggcggccgtc 3337162 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cgcgcgccgccgtcgcggcggccg 72 |||||||||||||||| ||||||| Sbjct: 3801414 cgcgcgccgccgtcgccgcggccg 3801391
>dbj|AP006457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0038P01 Length = 148506 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 gcgccgccgtcgcggcggccg 72 ||||||||||||||||||||| Sbjct: 138938 gcgccgccgtcgcggcggccg 138958
>dbj|AP005764.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0016A21 Length = 144076 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 cgcaccaccgccgcctccgcc 291 ||||||||||||||||||||| Sbjct: 30469 cgcaccaccgccgcctccgcc 30449
>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1060_D03 Length = 102178 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 269 gccgcaccaccgccgcctccgccgc 293 ||||||||||||||||| ||||||| Sbjct: 88228 gccgcaccaccgccgccgccgccgc 88252
>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1653_F07, complete sequence Length = 110109 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 gcgccgccgtcgcggcggccg 72 ||||||||||||||||||||| Sbjct: 44538 gcgccgccgtcgcggcggccg 44558
>dbj|AK120766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007L18, full insert sequence Length = 3476 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 caccaccgccgcctccgccgc 293 ||||||||||||||||||||| Sbjct: 350 caccaccgccgcctccgccgc 330
>dbj|AK105486.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-B08, full insert sequence Length = 1605 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 359 ccaccgccgcctccgccgctg 339
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 tccgccgccaccgcctcgacc 330 ||||||||||||||||||||| Sbjct: 1893823 tccgccgccaccgcctcgacc 1893803
>gb|AF174599.1|AF174599 Homo sapiens F-box protein Fbx11 (FBX11) mRNA, partial cds Length = 591 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 136 ccaccgccgcctccgccgctg 156
>gb|AY961440.1| Phytophthora infestans clone PB022G3 HAM34-like putative membrane protein mRNA, complete cds Length = 579 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ccaccgccgcctccgccgctg 295 ||||||||||||||||||||| Sbjct: 117 ccaccgccgcctccgccgctg 137
>gb|AE003679.2| Drosophila melanogaster chromosome 3R, section 17 of 118 of the complete sequence Length = 216994 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 accgcttccgccgccaccgcc 324 ||||||||||||||||||||| Sbjct: 213863 accgcttccgccgccaccgcc 213883
>ref|XM_550268.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2234 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 ccgcaccaccgccgcctccgccgc 293 ||||||||||||| |||||||||| Sbjct: 363 ccgcaccaccgccccctccgccgc 386
>ref|XM_525325.1| PREDICTED: Pan troglodytes LOC469941 (LOC469941), mRNA Length = 1695 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 gccgcgcgccgccgtcgcggcggccgtc 74 ||||| |||||||||||| ||||||||| Sbjct: 1332 gccgcccgccgccgtcgccgcggccgtc 1305
>ref|XM_481766.1| Oryza sativa (japonica cultivar-group), mRNA Length = 297 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 caccaccgccgcctccgccg 292 |||||||||||||||||||| Sbjct: 53 caccaccgccgcctccgccg 72
>ref|XM_481104.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 cttccgccgccaccgcctcg 327 |||||||||||||||||||| Sbjct: 773 cttccgccgccaccgcctcg 792
>ref|NM_184784.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2319 Score = 40.1 bits (20), Expect = 6.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 45 ccgccgcgcgccgccgtcgcggcggccgtccc 76 ||||||||||||||| ||||||| |||||||| Sbjct: 287 ccgccgcgcgccgcc-tcgcggccgccgtccc 317
>ref|NM_191311.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1155 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgccgcgcgccgccgtcgc 64 |||||||||||||||||||| Sbjct: 189 ccgccgcgcgccgccgtcgc 208
>ref|NM_193373.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1374 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 cgccgcgcgccgccgtcgcg 65 |||||||||||||||||||| Sbjct: 28 cgccgcgcgccgccgtcgcg 9
>ref|XM_477260.1| Oryza sativa (japonica cultivar-group), mRNA Length = 450 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 ccaccgccgcctccgccgct 294 |||||||||||||||||||| Sbjct: 323 ccaccgccgcctccgccgct 304
>ref|XM_359956.1| Magnaporthe grisea 70-15 hypothetical protein (MG11027.4) partial mRNA Length = 1494 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gcaccaccgccgcctccgcc 291 |||||||||||||||||||| Sbjct: 844 gcaccaccgccgcctccgcc 863
>ref|XM_616100.2| PREDICTED: Bos taurus similar to T-box 2 (LOC535982), mRNA Length = 3380 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 caccaccgccgcctccgccg 292 |||||||||||||||||||| Sbjct: 1912 caccaccgccgcctccgccg 1893
>ref|NM_008273.1| Mus musculus homeo box D11 (Hoxd11), mRNA Length = 1011 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||| ||||||||||||||||||| Sbjct: 250 ccgcgccaccgccgcctccgccgc 227
>gb|AY510084.1| Vibriophage VP5, complete genome Length = 39786 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 caccaccgccgcctccgccg 292 |||||||||||||||||||| Sbjct: 11239 caccaccgccgcctccgccg 11220
>ref|XM_843419.1| PREDICTED: Canis familiaris similar to EF hand domain family, member A2 (LOC606938), mRNA Length = 1614 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 54 gccgccgtcgcggcggccgtccccgccc 81 ||||||| |||||| ||||||||||||| Sbjct: 27 gccgccgccgcggctgccgtccccgccc 54
>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome Length = 241087 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 caccaccgccgcctccgccg 292 |||||||||||||||||||| Sbjct: 54108 caccaccgccgcctccgccg 54127
>emb|AL359918.43| Human DNA sequence from clone RP11-567G24 on chromosome 1 Contains part of the FMN2 gene for formin 2, a proteasome 26S non-ATPase subunit 2 (PSMD2) pseudogene, an alcohol dehydrogenase 5 (class III), chi polypeptide (ADH5) pseudogene, a novel gene and three CpG islands, complete sequence Length = 208383 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 384 cgctggtgcagtacccgcagcccccagc 411 |||||||||||| || |||||||||||| Sbjct: 127528 cgctggtgcagtcccagcagcccccagc 127501
>emb|BX043317.1|CNS095L5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC15DD09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 829 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||||||||||||||| ||||||| Sbjct: 81 ccgcaccaccgccgccgccgccgc 58
>emb|BX032569.1|CNS08XAL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA48CA10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 815 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||||||||||||||| ||||||| Sbjct: 149 ccgcaccaccgccgccgccgccgc 126
>emb|BX026803.1|CNS08SUF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA40AH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 273 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||||||||||||||| ||||||| Sbjct: 109 ccgcaccaccgccgccgccgccgc 86
>emb|BX025618.1|CNS08RXI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA39BB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 550 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||||||||||||||| ||||||| Sbjct: 53 ccgcaccaccgccgccgccgccgc 30
>emb|BX025207.1|CNS08RM3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA38CF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 369 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||||||||||||||| ||||||| Sbjct: 136 ccgcaccaccgccgccgccgccgc 113
>emb|BX019761.1|CNS08NET Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA3AF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 968 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||||||||||||||| ||||||| Sbjct: 139 ccgcaccaccgccgccgccgccgc 116
>emb|BX017326.1|CNS08LJ6 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA26AD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 753 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||||||||||||||| ||||||| Sbjct: 117 ccgcaccaccgccgccgccgccgc 94
>emb|BX017147.1|CNS08LE7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA25DB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 797 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||||||||||||||| ||||||| Sbjct: 136 ccgcaccaccgccgccgccgccgc 113
>emb|BX015608.1|CNS08K7G Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA23BG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 993 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||||||||||||||| ||||||| Sbjct: 137 ccgcaccaccgccgccgccgccgc 114
>emb|BX015607.1|CNS08K7F Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23BG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 956 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||||||||||||||| ||||||| Sbjct: 887 ccgcaccaccgccgccgccgccgc 910
>emb|BX015483.1|CNS08K3Z Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA23BA07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 724 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||||||||||||||| ||||||| Sbjct: 129 ccgcaccaccgccgccgccgccgc 106
>emb|BX012937.1|CNS08I59 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA2BH12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 388 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||||||||||||||| ||||||| Sbjct: 135 ccgcaccaccgccgccgccgccgc 112
>emb|X93605.1|ZMPDHBGEN Zymomonas mobilis pdhB & lpd genes & ORF's 4,5,6,7 & 8 Length = 8238 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gcaccaccgccgcctccgcc 291 |||||||||||||||||||| Sbjct: 3557 gcaccaccgccgcctccgcc 3576
>emb|X71422.1|MMHOXD11 M.musculus Hoxd-11 gene Length = 5593 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||| ||||||||||||||||||| Sbjct: 1961 ccgcgccaccgccgcctccgccgc 1938
>emb|X60395.1|MMHOX46 M.musculus Hox-4.6 gene Length = 2205 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||| ||||||||||||||||||| Sbjct: 582 ccgcgccaccgccgcctccgccgc 559
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cgccgccgtcgcggcggccg 72 |||||||||||||||||||| Sbjct: 40805 cgccgccgtcgcggcggccg 40786
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cgccgccgtcgcggcggccg 72 |||||||||||||||||||| Sbjct: 285329 cgccgccgtcgcggcggccg 285310
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 ccgcttccgccgccaccgcc 324 |||||||||||||||||||| Sbjct: 14315 ccgcttccgccgccaccgcc 14296
>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2 Length = 178073 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 accgcttccgccgccaccgc 323 |||||||||||||||||||| Sbjct: 82584 accgcttccgccgccaccgc 82565
>gb|AE005877.1| Caulobacter crescentus CB15 section 203 of 359 of the complete genome Length = 12778 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 cgccgcgcgccgccgtcgcg 65 |||||||||||||||||||| Sbjct: 10552 cgccgcgcgccgccgtcgcg 10533
>gb|AC015584.18| Mus musculus, clone RP23-400H17, complete sequence Length = 214875 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||| ||||||||||||||||||| Sbjct: 119513 ccgcgccaccgccgcctccgccgc 119490
>gb|AC027322.4| Homo sapiens chromosome 5 clone CTD-2027G10, complete sequence Length = 156248 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 gctaccactgccgccgccgc 386 |||||||||||||||||||| Sbjct: 149167 gctaccactgccgccgccgc 149148
>gb|AC026693.5| Homo sapiens chromosome 5 clone CTC-261E10, complete sequence Length = 92250 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 gctaccactgccgccgccgc 386 |||||||||||||||||||| Sbjct: 33270 gctaccactgccgccgccgc 33289
>gb|AY196214.1| Streptomyces griseochromogenes blasticidin biosynthetic cluster, partial sequence Length = 36677 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 gccgccaccgcctcgaccac 332 |||||||||||||||||||| Sbjct: 17760 gccgccaccgcctcgaccac 17779
>gb|AY757329.2| Oreochromis niloticus isolate B8a Hox protein gene, partial cds Length = 940 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 gcaccaccgccgcctccgccgctg 295 ||||||||||| |||||||||||| Sbjct: 828 gcaccaccgccacctccgccgctg 805
>ref|NG_002387.1| Homo sapiens proteasome 26S non-ATPase subunit 2 pseudogene (LOC266783) on chromosome 1 Length = 3046 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 384 cgctggtgcagtacccgcagcccccagc 411 |||||||||||| || |||||||||||| Sbjct: 127 cgctggtgcagtcccagcagcccccagc 154
>tpg|BK000536.1| TPA: TPA_exp: Caulobacter crescentus polar organelle development protein (podJ) gene, complete cds Length = 3186 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 cgccgcgcgccgccgtcgcg 65 |||||||||||||||||||| Sbjct: 2227 cgccgcgcgccgccgtcgcg 2246
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 caccaccgccgcctccgccg 292 |||||||||||||||||||| Sbjct: 15374172 caccaccgccgcctccgccg 15374191 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 cttccgccgccaccgcctcg 327 |||||||||||||||||||| Sbjct: 9913652 cttccgccgccaccgcctcg 9913671 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 45 ccgccgcgcgccgccgtcgcggcggccg 72 ||||||||| ||||||||||||| |||| Sbjct: 8415072 ccgccgcgccccgccgtcgcggccgccg 8415099 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 ccgcttccgccgccaccgcc 324 |||||||||||||||||||| Sbjct: 7796033 ccgcttccgccgccaccgcc 7796014
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete sequence Length = 152883 Score = 40.1 bits (20), Expect = 6.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 45 ccgccgcgcgccgccgtcgcggcggccgtccc 76 ||||||||||||||| ||||||| |||||||| Sbjct: 102371 ccgccgcgcgccgcc-tcgcggccgccgtccc 102401
>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131G08 Length = 158241 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgccgcgcgccgccgtcgc 64 |||||||||||||||||||| Sbjct: 99219 ccgccgcgcgccgccgtcgc 99238
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 ||||||||||||| |||||||||| Sbjct: 3273 ccgcaccaccgccccctccgccgc 3250
>ref|XM_580024.1| PREDICTED: Rattus norvegicus LOC499838 (LOC499838), mRNA Length = 2110 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 ctgccgccgccgctggtgca 393 |||||||||||||||||||| Sbjct: 199 ctgccgccgccgctggtgca 218
>gb|AC013451.8|AC013451 Homo sapiens chromosome 14 clone CTD-2207P18 map 14q24.3, complete sequence Length = 111234 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 agctggggtgacggctggct 353 |||||||||||||||||||| Sbjct: 93832 agctggggtgacggctggct 93813
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcttccgccgccaccgcct 325 |||||||||||||||||||| Sbjct: 2910473 cgcttccgccgccaccgcct 2910492
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 45 ccgccgcgcgccgccgtcgcggcggccg 72 ||||||||| ||||||||||||| |||| Sbjct: 30789 ccgccgcgccccgccgtcgcggccgccg 30816
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 ttcgaacccagctcgcgggaggag 194 |||||||||||||||| ||||||| Sbjct: 6953880 ttcgaacccagctcgctggaggag 6953903
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 ||||||||||||| |||||||||| Sbjct: 162861 ccgcaccaccgccccctccgccgc 162838
>dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0003K21 Length = 158810 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 ccaccgccgcctccgccgct 294 |||||||||||||||||||| Sbjct: 94947 ccaccgccgcctccgccgct 94928
>dbj|AP004344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0639B07 Length = 138780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 ccaccgccgcctccgccgct 294 |||||||||||||||||||| Sbjct: 7036 ccaccgccgcctccgccgct 7017
>dbj|AP005517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0090H20 Length = 132628 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 ccgcttccgccgccaccgcc 324 |||||||||||||||||||| Sbjct: 27320 ccgcttccgccgccaccgcc 27301
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1790_D02 Length = 162928 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 caccaccgccgcctccgccg 292 |||||||||||||||||||| Sbjct: 59748 caccaccgccgcctccgccg 59767
>dbj|AK121293.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110A06, full insert sequence Length = 2234 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 ccgcaccaccgccgcctccgccgc 293 ||||||||||||| |||||||||| Sbjct: 363 ccgcaccaccgccccctccgccgc 386
>dbj|AK120873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026M17, full insert sequence Length = 2517 Score = 40.1 bits (20), Expect = 6.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 45 ccgccgcgcgccgccgtcgcggcggccgtccc 76 ||||||||||||||| ||||||| |||||||| Sbjct: 357 ccgccgcgcgccgcc-tcgcggccgccgtccc 387
>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0005C03 Length = 166423 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 cttccgccgccaccgcctcg 327 |||||||||||||||||||| Sbjct: 60899 cttccgccgccaccgcctcg 60918
>emb|Z48625.1|HVGRP2 H.vulgare mRNA for glycine rich protein Length = 433 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 caccaccgccgcctccgccg 292 |||||||||||||||||||| Sbjct: 61 caccaccgccgcctccgccg 42
>dbj|AK110221.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-E01, full insert sequence Length = 3079 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 accgcttccgccgccaccgc 323 |||||||||||||||||||| Sbjct: 1515 accgcttccgccgccaccgc 1534
>dbj|AK070080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045J04, full insert sequence Length = 2978 Score = 40.1 bits (20), Expect = 6.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 45 ccgccgcgcgccgccgtcgcggcggccgtccc 76 ||||||||||||||| ||||||| |||||||| Sbjct: 292 ccgccgcgcgccgcc-tcgcggccgccgtccc 322
>dbj|AK067793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114H14, full insert sequence Length = 2638 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgccgcgcgccgccgtcgc 64 |||||||||||||||||||| Sbjct: 391 ccgccgcgcgccgccgtcgc 410
>emb|X60761.1|MMHOX46E1 M.musculus Hox-4.6 gene, exon 1 (and joined CDS) Length = 803 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||| ||||||||||||||||||| Sbjct: 278 ccgcgccaccgccgcctccgccgc 255
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 cgccgcgcgccgccgtcgcg 65 |||||||||||||||||||| Sbjct: 3294419 cgccgcgcgccgccgtcgcg 3294400
>emb|AL928644.12| Mouse DNA sequence from clone RP23-313J15 on chromosome 2, complete sequence Length = 219870 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 ccgcaccaccgccgcctccgccgc 293 |||| ||||||||||||||||||| Sbjct: 167574 ccgcgccaccgccgcctccgccgc 167551
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 accgccgcctccgccgctgt 296 |||||||||||||||||||| Sbjct: 2781479 accgccgcctccgccgctgt 2781460
>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 368801 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ttcgattccaattcgaaccc 179 |||||||||||||||||||| Sbjct: 202630 ttcgattccaattcgaaccc 202611
>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 501020 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ttcgattccaattcgaaccc 179 |||||||||||||||||||| Sbjct: 5701 ttcgattccaattcgaaccc 5720
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gcaccaccgccgcctccgcc 291 |||||||||||||||||||| Sbjct: 508586 gcaccaccgccgcctccgcc 508605
>emb|X55076.1|MIBVATP6 B.vulgaris mitDNA for ATPase subunit 6 Length = 4156 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 ttcgattccaattcgaaccc 179 |||||||||||||||||||| Sbjct: 1011 ttcgattccaattcgaaccc 1030
>dbj|D90601.1| Hepatitis GB virus C genomic RNA for polyprotein isolate GT230, complete cds Length = 9390 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 gcagtacccgcagcccccag 410 |||||||||||||||||||| Sbjct: 5704 gcagtacccgcagcccccag 5685
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgccgcgcgccgccgtcgc 64 |||||||||||||||||||| Sbjct: 9868 ccgccgcgcgccgccgtcgc 9887 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,439,015 Number of Sequences: 3902068 Number of extensions: 3439015 Number of successful extensions: 112841 Number of sequences better than 10.0: 149 Number of HSP's better than 10.0 without gapping: 153 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 107253 Number of HSP's gapped (non-prelim): 5677 length of query: 449 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 427 effective length of database: 17,147,199,772 effective search space: 7321854302644 effective search space used: 7321854302644 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
