>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 0.23
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 13      cggcaagaacggcggctgga 32
               ||||||||||||||||||||
Sbjct: 5648524 cggcaagaacggcggctgga 5648543

>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0021C04
          Length = 162115

 Score = 40.1 bits (20), Expect = 0.23
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    cggcaagaacggcggctgga 32
             ||||||||||||||||||||
Sbjct: 40671 cggcaagaacggcggctgga 40690

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 38.2 bits (19), Expect = 0.90
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 10      ccgcggcaagaacggcggc 28
               |||||||||||||||||||
Sbjct: 1345293 ccgcggcaagaacggcggc 1345311

>gb|AE009341.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 111 of
            187 of the complete sequence
          Length = 10216

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 9    cccgcggcaagaacggcggctg 30
            |||||||||||| |||||||||
Sbjct: 2429 cccgcggcaagatcggcggctg 2408

>gb|AE008274.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 78 of
            187 of the complete sequence
          Length = 13382

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 9    cccgcggcaagaacggcggctg 30
            |||||||||||| |||||||||
Sbjct: 3776 cccgcggcaagatcggcggctg 3797

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 14      ggcaagaacggcggctgg 31
               ||||||||||||||||||
Sbjct: 4469759 ggcaagaacggcggctgg 4469742



 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 11      cgcggcaagaacggcggc 28
               ||||||||||||||||||
Sbjct: 3735946 cgcggcaagaacggcggc 3735963

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 14      ggcaagaacggcggctgg 31
               ||||||||||||||||||
Sbjct: 3628628 ggcaagaacggcggctgg 3628611

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 36.2 bits (18), Expect = 3.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 14      ggcaagaacggcggctgg 31
               ||||||||||||||||||
Sbjct: 1404676 ggcaagaacggcggctgg 1404693


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 112,043
Number of Sequences: 3902068
Number of extensions: 112043
Number of successful extensions: 25956
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25705
Number of HSP's gapped (non-prelim): 251
length of query: 36
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 16
effective length of database: 17,155,003,908
effective search space: 274480062528
effective search space used: 274480062528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)