>COBS_RHILO (Q98KP0) Cobalamin synthase (EC 2.-.-.-)|
          Length = 259

 Score = 32.7 bits (73), Expect = 0.24
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +3

Query: 18  LAAASWVEPAPGILPPKIGTISLFSAARFGVGRG 119
           LAAA W  P  G+L   IG I   +A RFG+  G
Sbjct: 39  LAAAIWAAPVAGLLVGLIGAIVFATAERFGLAMG 72

>TRI1_STRCO (Q9RDE2) Tricorn protease homolog 1 (EC 3.4.21.-)|
          Length = 1067

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = -2

Query: 285 TARGSGAAYRRGSVEWKYRGAGPANGLA---GARDRLLRS 175
           TARGS  A R G V W    +GPA  LA   G R+RL R+
Sbjct: 300 TARGSAVAVR-GGVHWVTHRSGPARALAATPGVRNRLPRT 338

>ENL_HUMAN (Q03111) Protein ENL|
          Length = 559

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -3

Query: 182 SAAPPGLNPTRPGTAPFSDRIPSPDAKSSRGKK 84
           S + PG +P    ++ FSD+ P+ D  S+RG+K
Sbjct: 308 SRSAPGTSPRTSSSSSFSDKKPAKDKSSTRGEK 340

>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2|
          Length = 1009

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 158 PTRPGTAPFSDRIPSPDAKSSRGKKRNRPD 69
           P   G  PF+ R P PDA ++ G++  RP+
Sbjct: 225 PAPQGDRPFNQRAPRPDANANFGQRAPRPE 254

>Y737_DROME (P83475) Hypothetical protein CG31737 in chromosome 2|
          Length = 263

 Score = 30.8 bits (68), Expect = 0.92
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 212 FAGPAPRYFHSTLPRRYAAPEPRAVP 289
           + GP PR +    PRRY+ P PR  P
Sbjct: 194 YPGPGPRGYPGQGPRRYSCPGPRGYP 219

>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau|
            kinase)
          Length = 1321

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 23/45 (51%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -2

Query: 231  RGAGPANGLAGARDRLLRS-ATRAKPDAARN-SPIFRSNSLSRRQ 103
            RG GP    AGAR    RS    A   AARN S   RS SLSRR+
Sbjct: 1214 RGLGPGRAQAGARPPAPRSPRLPASTSAARNASASPRSQSLSRRE 1258

>CHEB1_CAUCR (O87717) Chemotaxis response regulator protein-glutamate|
           methylesterase of group 1 operon (EC 3.1.1.61)
          Length = 344

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = +1

Query: 85  FFPRLDLASGEGIR-SENGAV--PGRVGFSPGGAAEEPVARS 201
           F  RLD +SG  ++ + +GA+  PG+V  +PGGA    V RS
Sbjct: 198 FAARLDRSSGAKVQEASDGALLEPGKVYVAPGGATHLEVVRS 239

>CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displacement protein)|
            (CDP)
          Length = 1505

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -3

Query: 203  PERATGSSAAPPGLNPTRPGTAPFSDRIPSPDAKSSRGKKRNRP 72
            PE A  S+AA PG  P  P +AP       P + SS      RP
Sbjct: 1417 PEDAATSAAAAPGEGPAAPSSAP-------PPSNSSSSSAPRRP 1453

>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional|
           activator IE175) (Alpha-4 protein)
          Length = 1298

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/36 (50%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
 Frame = -3

Query: 197 RATG---SSAAP--PGLNPTRPGTAPFSDRIPSPDA 105
           RA G   SSAAP  PG  P  PG  P S+  P P A
Sbjct: 218 RAVGRGPSSAAPAAPGRTPPPPGPPPLSEAAPKPRA 253

>TGM1_HUMAN (P22735) Protein-glutamine gamma-glutamyltransferase K (EC|
           2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K))
           (Transglutaminase-1) (Epidermal TGase)
          Length = 817

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 167 GLNPTRPGTAPFSDRIPSPDAKSSRGKKRN 78
           G NP +P T P  +  P PD +S RG  R+
Sbjct: 13  GGNPLQPPTTPSPEPEPEPDGRSRRGGGRS 42

>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC|
            2.7.11.1) (Aortic preferentially expressed protein 1)
            (APEG-1)
          Length = 3259

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 167  GLNPTRPGTAPFSDRIPSPDAKSSRGKKRNRPDLR 63
            G  P++   AP  + +PSP  +S  G    RP+LR
Sbjct: 1982 GRAPSKDQEAPSPEALPSPGQESPDGPSPRRPELR 2016

>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2|
          Length = 964

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 6/60 (10%)
 Frame = -1

Query: 169 PG*TRRGPEQPHFQIEFPLPTPNLAAEKREIVPIFGGRMPGAG------STHDAAARGRG 8
           PG   RGP         P P P  AA  +   P  GG  PG G      S  D    GRG
Sbjct: 284 PGGDNRGPRPAGAGDRGPRPAPAAAAPSQPPAPAPGGSRPGKGKKGGERSWDDNKKGGRG 343

>FABD_HUMAN (Q8IVS2) Malonyl CoA-acyl carrier protein transacylase,|
           mitochondrial precursor (EC 2.3.1.39) (MCT)
           (Mitochondrial malonyltransferase)
          Length = 390

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 19/48 (39%), Positives = 27/48 (56%)
 Frame = -2

Query: 294 KIGTARGSGAAYRRGSVEWKYRGAGPANGLAGARDRLLRSATRAKPDA 151
           ++   RG GA+YRRG+  +     G A G+A     LLR AT A+ +A
Sbjct: 7   RVAWVRGLGASYRRGASSFPVPPPG-AQGVA----ELLRDATGAEEEA 49

>CABP4_HUMAN (P57796) Calcium-binding protein 4 (CaBP4)|
          Length = 275

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = -3

Query: 191 TGSSAAPPGLNPTRPGTAPFSDRIPSPDAKSSRGKKRNRPD 69
           TG  A     NP   G  P      SP   SSR   R+RPD
Sbjct: 62  TGPEAPGSSNNPPSTGEGPAGAPPASPGPASSRQSHRHRPD 102

>HMEN_ARTSF (Q05640) Homeobox protein engrailed|
          Length = 349

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 182 SAAPPGLNPTRPGTAPFSDRIPSP 111
           SA+ PG +P RPG+A  S  + SP
Sbjct: 32  SASTPGPSPDRPGSATMSSPLSSP 55

>EXO84_YARLI (Q6C238) Exocyst complex component EXO84|
          Length = 657

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -1

Query: 145 EQPHFQIEFPLPTPNLAAEKREIVPI-----FGGRMPGAGSTHDAAA 20
           ++P+ Q    L  PN+  + RE V       F  R+PG G  +DAAA
Sbjct: 29  QKPYIQDSTHLQLPNVGDKDRERVGNMVKRRFSARIPGQGVPYDAAA 75

>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1687

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
 Frame = -2

Query: 288 GTARGSGAAYRRGSVEWKYRGAGP-------ANGLAGARDRLLRSATRAKPDAARNSPIF 130
           G A G+G   RRG+ +    GA P       AN L   R RL R+ + A   ++ +SP  
Sbjct: 65  GRAGGTGRRRRRGAPQPAAGGAAPVPAAGGGANSLLLKRGRLKRNLSAAAAASSSSSPSS 124

Query: 129 RSNS 118
            S++
Sbjct: 125 ASSA 128

>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1717

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = -2

Query: 288 GTARGSGAAYRRGSVEWKYRGAGPANGLAGARDRLLRSATRAKPDAARNSPIFRSNSLS 112
           G A G+G   RRG+ +    GA P  G  G  + LL    R K + +  +    S+S S
Sbjct: 85  GRAGGAGRRRRRGAPQPIAGGAAPVPGAGGGANSLLLRRGRLKRNLSAAAAAASSSSSS 143

>IF2_BRAJA (Q89WA9) Translation initiation factor IF-2|
          Length = 902

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
 Frame = -3

Query: 203 PERATGSSAAPPGLNPTRPGTA---PFSDRIPSPDAKSSRG 90
           P    G+ AA PG   TRPGT    P +     P A + RG
Sbjct: 192 PAPRPGAPAARPGTTTTRPGTTTARPATTTAQRPGAPAGRG 232

>TR2M_AGRRH (Q09109) Tryptophan 2-monooxygenase (EC 1.13.12.3)|
          Length = 749

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 88  FPRLDLASGEGIRSENGAVPGRVGFSPGGAAEEPVARSG 204
           FP +DL    G   E+ A  GR+G+ P G  +  VA  G
Sbjct: 190 FPTVDLLYDYGKFFESCAADGRIGYFPEGVTKPKVAIIG 228

>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC|
            2.7.11.1) (Aortic preferentially expressed protein 1)
            (APEG-1)
          Length = 3262

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 158  PTRPGTAPFSDRIPSPDAKSSRGKKRNRPDLR 63
            P++   AP  + +PSP  +S  G    RP+LR
Sbjct: 1985 PSKDQEAPSPEALPSPGQESPDGPSPRRPELR 2016

>MAP4_BOVIN (P36225) Microtubule-associated protein 4 (MAP 4)|
           (Microtubule-associated protein-U) (MAP-U)
          Length = 1072

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
 Frame = -3

Query: 194 ATGSSAAPPGLNP----TRPGTAPFSDRIPSPDAKSSRGKKRNRP 72
           A+GS  A P   P    +RP T P  D  P P A++   +KR  P
Sbjct: 691 ASGSVPAAPPKRPAAATSRPSTLPSKDTKPKPVAEAKIPEKRVSP 735

>FCRL_HUMAN (Q7L513) Fc receptor-like and mucin-like 1 precursor (Fc receptor|
           homolog expressed in B-cells) (Fc receptor related
           protein X) (FcRX) (Fc receptor-like protein)
          Length = 359

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
 Frame = -3

Query: 197 RATGSSAAPPGLNP-----TRPGTAPFSDRIPSP 111
           +   SSAAPP LNP       PGTAP  +  P P
Sbjct: 261 QGASSSAAPPTLNPAPQKSAAPGTAP--EEAPGP 292


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,083,490
Number of Sequences: 219361
Number of extensions: 819921
Number of successful extensions: 3961
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3956
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)