>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  119 bits (60), Expect = 5e-24
 Identities = 135/160 (84%)
 Strand = Plus / Plus

                                                                            
Query: 130      gaaaatggggctgttccgggccgcgtcgggtttagcccgggtggcgctgcggaggagcct 189
                ||||||||||  ||| ||||| ||||| || || || |||||||||||| |||||| |||
Sbjct: 19187329 gaaaatggggtggtttcgggctgcgtccggattggctcgggtggcgctgaggaggaacct 19187388

                                                                            
Query: 190      gtcgcgcgctccggcgagcccgttcgccggccccgcgccgcggtacttccactcgacgct 249
                | |||| |||||||||| ||| || ||||| || ||||| |||||||||||||| || | 
Sbjct: 19187389 ggcgcgtgctccggcgaacccttttgccggtcctgcgccacggtacttccactccacccg 19187448

                                                        
Query: 250      cccccggcggtacgcggcgcctgagccccgcgccgtgccg 289
                ||||||||||| ||| || |||| ||||||||||||||||
Sbjct: 19187449 cccccggcggttcgccgctcctgtgccccgcgccgtgccg 19187488



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 1        atctttctcctcttcccctc 20
                ||||||||||||||||||||
Sbjct: 13847316 atctttctcctcttcccctc 13847297

>dbj|AK098921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N21, full
           insert sequence
          Length = 3612

 Score =  119 bits (60), Expect = 5e-24
 Identities = 135/160 (84%)
 Strand = Plus / Plus

                                                                       
Query: 130 gaaaatggggctgttccgggccgcgtcgggtttagcccgggtggcgctgcggaggagcct 189
           ||||||||||  ||| ||||| ||||| || || || |||||||||||| |||||| |||
Sbjct: 271 gaaaatggggtggtttcgggctgcgtccggattggctcgggtggcgctgaggaggaacct 330

                                                                       
Query: 190 gtcgcgcgctccggcgagcccgttcgccggccccgcgccgcggtacttccactcgacgct 249
           | |||| |||||||||| ||| || ||||| || ||||| |||||||||||||| || | 
Sbjct: 331 ggcgcgtgctccggcgaacccttttgccggtcctgcgccacggtacttccactccacccg 390

                                                   
Query: 250 cccccggcggtacgcggcgcctgagccccgcgccgtgccg 289
           ||||||||||| ||| || |||| ||||||||||||||||
Sbjct: 391 cccccggcggttcgccgctcctgtgccccgcgccgtgccg 430

>dbj|AK068713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161L21, full
           insert sequence
          Length = 2576

 Score =  119 bits (60), Expect = 5e-24
 Identities = 135/160 (84%)
 Strand = Plus / Plus

                                                                       
Query: 130 gaaaatggggctgttccgggccgcgtcgggtttagcccgggtggcgctgcggaggagcct 189
           ||||||||||  ||| ||||| ||||| || || || |||||||||||| |||||| |||
Sbjct: 261 gaaaatggggtggtttcgggctgcgtccggattggctcgggtggcgctgaggaggaacct 320

                                                                       
Query: 190 gtcgcgcgctccggcgagcccgttcgccggccccgcgccgcggtacttccactcgacgct 249
           | |||| |||||||||| ||| || ||||| || ||||| |||||||||||||| || | 
Sbjct: 321 ggcgcgtgctccggcgaacccttttgccggtcctgcgccacggtacttccactccacccg 380

                                                   
Query: 250 cccccggcggtacgcggcgcctgagccccgcgccgtgccg 289
           ||||||||||| ||| || |||| ||||||||||||||||
Sbjct: 381 cccccggcggttcgccgctcctgtgccccgcgccgtgccg 420

>dbj|AK067777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O03, full
           insert sequence
          Length = 3581

 Score =  119 bits (60), Expect = 5e-24
 Identities = 135/160 (84%)
 Strand = Plus / Plus

                                                                       
Query: 130 gaaaatggggctgttccgggccgcgtcgggtttagcccgggtggcgctgcggaggagcct 189
           ||||||||||  ||| ||||| ||||| || || || |||||||||||| |||||| |||
Sbjct: 317 gaaaatggggtggtttcgggctgcgtcaggattggctcgggtggcgctgaggaggaacct 376

                                                                       
Query: 190 gtcgcgcgctccggcgagcccgttcgccggccccgcgccgcggtacttccactcgacgct 249
           | |||| |||||||||| ||| || ||||| || ||||| |||||||||||||| || | 
Sbjct: 377 ggcgcgtgctccggcgaacccttttgccggtcctgcgccacggtacttccactccacccg 436

                                                   
Query: 250 cccccggcggtacgcggcgcctgagccccgcgccgtgccg 289
           ||||||||||| ||| || |||| ||||||||||||||||
Sbjct: 437 cccccggcggttcgccgctcctgtgccccgcgccgtgccg 476

>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
              complete sequence
          Length = 151936

 Score =  105 bits (53), Expect = 8e-20
 Identities = 135/161 (83%), Gaps = 1/161 (0%)
 Strand = Plus / Plus

                                                                          
Query: 130    gaaaatggggctgttccgggccgcgtcgggtttagcccgggtggcgctgcg-gaggagcc 188
              ||||||||||  ||| ||||| ||||| || || || |||||||||||| | ||||| ||
Sbjct: 120850 gaaaatggggtggtttcgggctgcgtccggattggctcgggtggcgctgagtgaggaacc 120909

                                                                          
Query: 189    tgtcgcgcgctccggcgagcccgttcgccggccccgcgccgcggtacttccactcgacgc 248
              || |||| |||||||||| ||| || ||||| || ||||| |||||||||||||| || |
Sbjct: 120910 tggcgcgtgctccggcgaacccttttgccggtcctgcgccacggtacttccactccaccc 120969

                                                       
Query: 249    tcccccggcggtacgcggcgcctgagccccgcgccgtgccg 289
               ||||||||||| ||| || |||| ||||||||||||||||
Sbjct: 120970 gcccccggcggttcgccgctcctgtgccccgcgccgtgccg 121010

>ref|NM_184141.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1870

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 10  ctcttcccctcgcggcggcgtc 31
           ||||||||||||||||||||||
Sbjct: 80  ctcttcccctcgcggcggcgtc 101

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 10      ctcttcccctcgcggcggcgtc 31
               ||||||||||||||||||||||
Sbjct: 1170048 ctcttcccctcgcggcggcgtc 1170027

>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0698A04
          Length = 141079

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 10     ctcttcccctcgcggcggcgtc 31
              ||||||||||||||||||||||
Sbjct: 139362 ctcttcccctcgcggcggcgtc 139341

>dbj|AP002487.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0684C01
          Length = 78600

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 10    ctcttcccctcgcggcggcgtc 31
             ||||||||||||||||||||||
Sbjct: 24351 ctcttcccctcgcggcggcgtc 24330

>dbj|AK067227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098B14, full
           insert sequence
          Length = 1873

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 10  ctcttcccctcgcggcggcgtc 31
           ||||||||||||||||||||||
Sbjct: 80  ctcttcccctcgcggcggcgtc 101

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 215     gccggccccgcgccgcggtac 235
               |||||||||||||||||||||
Sbjct: 3378810 gccggccccgcgccgcggtac 3378830

>emb|CR647832.2|CNS0EYU6 Tetraodon nigroviridis full-length cDNA
          Length = 1651

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  ggtttagcccgggtggcgct 177
            ||||||||||||||||||||
Sbjct: 1111 ggtttagcccgggtggcgct 1130

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 267    cgcctgagccccgcgccgtgccga 290
              ||||||||||||||||| ||||||
Sbjct: 500981 cgcctgagccccgcgccatgccga 500958

>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16
          Length = 348971

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    tcgccggccccgcgccgcgg 232
              ||||||||||||||||||||
Sbjct: 229143 tcgccggccccgcgccgcgg 229162

>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03,
             complete sequence
          Length = 175555

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atctttctcctcttcccctc 20
             ||||||||||||||||||||
Sbjct: 60975 atctttctcctcttcccctc 60956

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    tcgccggccccgcgccgcgg 232
              ||||||||||||||||||||
Sbjct: 584216 tcgccggccccgcgccgcgg 584197

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 8       tcctcttcccctcgcggcggcgtc 31
               |||||||||| |||||||||||||
Sbjct: 8976600 tcctcttcccttcgcggcggcgtc 8976577

>dbj|AP005064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0049G15
          Length = 155303

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 8     tcctcttcccctcgcggcggcgtc 31
             |||||||||| |||||||||||||
Sbjct: 78262 tcctcttcccttcgcggcggcgtc 78239


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,152,026
Number of Sequences: 3902068
Number of extensions: 2152026
Number of successful extensions: 42868
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42584
Number of HSP's gapped (non-prelim): 283
length of query: 295
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 273
effective length of database: 17,147,199,772
effective search space: 4681185537756
effective search space used: 4681185537756
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)